RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020431

Ensembl transcript IDs: ENSMUST00000020706.5

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGTATGCAAGAGATaGTGGGGGCTTCCTTGGGCTCCCCACAGCATGGGAACGGTCCCC +
Preference number: 1 (lower is better)
Translates to: LVASCAHTASGVCKR*WGLPWAPHSMGTVP
Trigger: GGGGACCGTTCCCATGCTGTGGGGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp AAGTGGGCACGGTGGGAAAGGGAGCACGGTGGGAAAGGGAGCCACTaGACAGTAAGTGCTGGAGCCACACGGGCTCCACGGAACCTGGGA +
Preference number: 1 (lower is better)
Translates to: KWARWEREHGGKGSH*TVSAGATRAPRNLG
Trigger: TCCCAGGTTCCGTGGAGCCCGTGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTCCCACCGTGCCCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTaGTGTATGCAAGAGATGCTGGGGGCTTCCTTGGGCTCCCCACAG +
Preference number: 1 (lower is better)
Translates to: PGMCAPGGQLCPHCQ*CMQEMLGASLGSPQ
Trigger: CTGTGGGGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CCCTACACTTCAGGAGTGAATCCTCTGGCCAGGCCACACACCTTCTaGCGTCCCCTAGGAAGGCTCCTGGCTCTAGGTCTGTGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: PYTSGVNPLARPHTF*RPLGRLLALGLCLW
Trigger: CCAGAGGCACAGACCTAGAGCCAGGAGCCTTCCTAGGGGACGGCAGAAGGTGTGTGGCCTGGCCAGAGGATTCACTCCTGAAGTGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGTATaGAAGAGATGCTGGGGGCTTCCTTGGGCTCCCCACAGCATGGGA +
Preference number: 1 (lower is better)
Translates to: CVLLVASCAHTASGV*KRCWGLPWAPHSMG
Trigger: TCCCATGCTGTGGGGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TCTTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTaGCAGTGGTGTATGCAAGAGATGCTGGGGGCTTCCTTGGGCTCC +
Preference number: 1 (lower is better)
Translates to: SSPGMCAPGGQLCPH*QWCMQEMLGASLGS
Trigger: GGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCAGGAGGGGTTaGAAGAGAATGTACGGGCCAGGAGATCAGAAGTGGGGCTGTAGG +
Preference number: 1 (lower is better)
Translates to: RAHCRSSQKPAARRG*KRMYGPGDQKWGCR
Trigger: CCTACAGCCCCACTTCTGATCTCCTGGCCCGTACATTCTCTTCCAACCCCTCCTGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CCCACAGAGCATCACAGATGGCCTCTAGCTAGGAAGAACCCCTCGTaGAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: PTEHHRWPLARKNPS*SSHQPASGPGHPRS
Trigger: TGACCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTTCCTAGCTAGAGGCCATCTGTGATGCTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GCCAGGAGGGGTTGGAAGAGAATGTACGGGCCAGGAGATCAGAAGTaGGGCTGTAGGGCCTCCCGAGAATTCCAGAAGACCTGCCTCTGG +
Preference number: 1 (lower is better)
Translates to: ARRGWKRMYGPGDQK*GCRASREFQKTCLW
Trigger: CCAGAGGCAGGTCTTCTGGAATTCTCGGGAGGCCCTACAGCCCCACTTCTGATCTCCTGGCCCGTACATTCTCTTCCAACCCCTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GGAACTCCAGGCTGTGTGAGAGGTTCTCTACCCTCCTCAGTGGCCTaGAAGGCCAGGGACAGTGCCACAGCCCTCAGCCAAAGTCACCAT +
Preference number: 1 (lower is better)
Translates to: GTPGCVRGSLPSSVA*KARDSATALSQSHH
Trigger: ATGGTGACTTTGGCTGAGGGCTGTGGCACTGTCCCTGGCCTTCCAGGCCACTGAGGAGGGTAGAGAACCTCTCACACAGCCTGGAGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TGGGGCCCAGGACTGGTGGCTGGCTCAGTCCGCTCAGCTATATCTTaGAGGGCGGGGTGTGTGTGTACCAATCCTGGCTGTAGGAACCAA +
Preference number: 1 (lower is better)
Translates to: WGPGLVAGSVRSAIS*RAGCVCTNPGCRNQ
Trigger: TTGGTTCCTACAGCCAGGATTGGTACACACACACCCCGCCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCTGGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AGGCAACAGAGCAGGCCCCTCTTCCCCAGGCATGTGTGCTCCTGGTaGCCAGTTGTGCCCACACTGCCAGTGGTGTATGCAAGAGATGCT +
Preference number: 1 (lower is better)
Translates to: RQQSRPLFPRHVCSW*PVVPTLPVVYARDA
Trigger: AGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAAGAGGGGCCTGCTCTGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp AGACATGACCACCGGAGGACGATGAAGCTACCTGCTCTCCAACCCTaGAGGCTGCAGTGGAGTGCTGAAGTCAGTCTGGCCCTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: RHDHRRTMKLPALQP*RLQWSAEVSLALAL
Trigger: CAGAGCCAGGGCCAGACTGACTTCAGCACTCCACTGCAGCCTTCAGGGTTGGAGAGCAGGTAGCTTCATCGTCCTCCGGTGGTCATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TGGCTTGGGCACATTTCCCATTGGCCTCAGGCCACACTCAGACAATaGTTCTCCTCCAGCCCAGCCACTTGGCTCCTCTGTCTGGTCCTG +
Preference number: 1 (lower is better)
Translates to: WLGHISHWPQATLRQ*FSSSPATWLLCLVL
Trigger: CAGGACCAGACAGAGGAGCCAAGTGGCTGGGCTGGAGGAGAAGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATGTGCCCAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CCAGCCCAGCCACTTGGCTCCTCTGTCTGGTCCTGGCTAGAGCCATaGTGGCTTGTGACACCCTGGAGCATTCTTGCCTTGCATGCATCT +
Preference number: 1 (lower is better)
Translates to: PAQPLGSSVWSWLEP*WLVTPWSILALHAS
Trigger: AGATGCATGCAAGGCAAGAATGCTCCAGGGTGTCACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGGCTGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AATGCTTCTCCTCCAGCCCAGCCACTTGGCTCCTCTGTCTGGTCCTaGCTAGAGCCATGGTGGCTTGTGACACCCTGGAGCATTCTTGCC +
Preference number: 1 (lower is better)
Translates to: NASPPAQPLGSSVWS*LEPWWLVTPWSILA
Trigger: GGCAAGAATGCTCCAGGGTGTCACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGGCTGGGCTGGAGGAGAAGCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CCATACTGCCCTGACCAAGACCTGACCAGCTCTTTGCTGTGCCCATaGTATGAACAGCTCAACTGTCATGGCCCTGCCCAGCGGGGCCAA +
Preference number: 1 (lower is better)
Translates to: PYCPDQDLTSSLLCP*YEQLNCHGPAQRGQ
Trigger: TTGGCCCCGCTGGGCAGGGCCATGACAGTTGAGCTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGCAGTATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CACAGAGAAGACAGCACACACCCCTCCTCTCTGAATGTGCAGCCATaGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCA +
Preference number: 1 (lower is better)
Translates to: HREDSTHPSSLNVQP*HRKRRAHCRSSQKP
Trigger: TGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATGGCTGCACATTCAGAGAGGAGGGGTGTGTGCTGTCTTCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AGGGATGTGCCCATCCCCCTCCCTCCCTGGAGCGAGGGAAGGGGATaGTGTGTGCTGCCTCAGCTTATAGGATATCAAGTGTCCCAAGTG +
Preference number: 1 (lower is better)
Translates to: RDVPIPLPPWSEGRG*CVLPQLIGYQVSQV
Trigger: CACTTGGGACACTTGATATCCTATAAGCTGAGGCAGCACACACCATCCCCTTCCCTCGCTCCAGGGAGGGAGGGGGATGGGCACATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp TGGCCCTGCCCAGCGGGGCCAACTTCCCAGTCTGGCACTCATACTTaGAACTGCTACCCAGGCTTGGAGTTACCCATAAGCCAGGACCTA +
Preference number: 1 (lower is better)
Translates to: WPCPAGPTSQSGTHT*NCYPGLELPISQDL
Trigger: TAGGTCCTGGCTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp AGCAGGGTGGGCATGGGTCAGAGTTCCTCTGCAGAAGGTGCTAGATaGTACCCTTACCACCACCCACAAGCTCCATCCCTGGCCACAGAG +
Preference number: 1 (lower is better)
Translates to: SRVGMGQSSSAEGAR*YPYHHPQAPSLATE
Trigger: CTCTGTGGCCAGGGATGGAGCTTGTGGGTGGTGGTAAGGGTATCATCTAGCACCTTCTGCAGAGGAACTCTGACCCATGCCCACCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp GAGAGGTTCTCTACCCTCCTCAGTGGCCTGGAAGGCCAGGGACAGTaGCACAGCCCTCAGCCAAAGTCACCATATACTCACTTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: ERFSTLLSGLEGQGQ*HSPQPKSPYTHLLW
Trigger: CCAGAGCAAGTGAGTATATGGTGACTTTGGCTGAGGGCTGTGGCACTGTCCCTGGCCTTCCAGGCCACTGAGGAGGGTAGAGAACCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TCAGACAATGCTTCTCCTCCAGCCCAGCCACTTGGCTCCTCTGTCTaGTCCTGGCTAGAGCCATGGTGGCTTGTGACACCCTGGAGCATT +
Preference number: 1 (lower is better)
Translates to: SDNASPPAQPLGSSV*SWLEPWWLVTPWSI
Trigger: AATGCTCCAGGGTGTCACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGGCTGGGCTGGAGGAGAAGCATTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CCCTCACCTTTATTCCTTAGTGACAATAGTGGGGCCCAGGACTGGTaGCTGGCTCAGTCCGCTCAGCTATATCTTGGAGGGCGGGGTGTG +
Preference number: 1 (lower is better)
Translates to: PSPLFLSDNSGAQDW*LAQSAQLYLGGRGV
Trigger: CACACCCCGCCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCTGGGCCCCACTATTGTCACTAAGGAATAAAGGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp CTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGGTTATGGGCGTGCGTaGCATCCTGGCTTCTTTGCTGGCTGGAGCTGTGCTGTCCTCCTA +
Preference number: 1 (lower is better)
Translates to: LRLWPVSAPCGYGRA*HPGFFAGWSCAVLL
Trigger: TAGGAGGACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TTCTTCCCATACTGCCCTGACCAAGACCTGACCAGCTCTTTGCTGTaGCCATGGTATGAACAGCTCAACTGTCATGGCCCTGCCCAGCGG +
Preference number: 1 (lower is better)
Translates to: FFPYCPDQDLTSSLL*PWYEQLNCHGPAQR
Trigger: CCGCTGGGCAGGGCCATGACAGTTGAGCTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGCAGTATGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp GATCAGAAGTGGGGCTGTAGGGCCTCCCGAGAATTCCAGAAGACCTaGCTCTGGCTGTTAGCAAGAGCCTACTCTTGGGGAAAGCCAGCA +
Preference number: 1 (lower is better)
Translates to: DQKWGCRASREFQKT*LWLLARAYSWGKPA
Trigger: TGCTGGCTTTCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTTCTGGAATTCTCGGGAGGCCCTACAGCCCCACTTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp GCCGTGAGGAAATGGGCCTCCACAGACAAGATCAGGCAGGGCTTATaGCCACCTGCCCTGCTTCAAGCTGCCTCCCTTCCTGTATTGAAA +
Preference number: 1 (lower is better)
Translates to: AVRKWASTDKIRQGL*PPALLQAASLPVLK
Trigger: TTTCAATACAGGAAGGGAGGCAGCTTGAAGCAGGGCAGGTGGGCATAAGCCCTGCCTGATCTTGTCTGTGGAGGCCCATTTCCTCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AGCTCAACTGTCATGGCCCTGCCCAGCGGGGCCAACTTCCCAGTCTaGCACTCATACTTGAAACTGCTACCCAGGCTTGGAGTTACCCAT +
Preference number: 1 (lower is better)
Translates to: SSTVMALPSGANFPV*HSYLKLLPRLGVTH
Trigger: ATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCATGACAGTTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTGGAGACTTaGCATGCAGCCTCCAGCTCTCCCTTGCTGAAAGTTTTCTTCCTA +
Preference number: 1 (lower is better)
Translates to: PALGHLRCSLKDLET*HAASSSPLLKVFFL
Trigger: TAGGAAGAAAACTTTCAGCAAGGGAGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TCTCACTCTGACCACACCTTGGGTGGCTCTGCCCATGCACCCATGTaGCCTCGGTTTGACACACGCATGCGTGATTGCAGTGTTATCGAC +
Preference number: 1 (lower is better)
Translates to: SHSDHTLGGSAHAPM*PRFDTRMRDCSVID
Trigger: GTCGATAACACTGCAATCACGCATGCGTGTGTCAAACCGAGGCCACATGGGTGCATGGGCAGAGCCACCCAAGGTGTGGTCAGAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AACCTACCACATCCTCCTTGCCTCCAGCCCACAGAGCATCACAGATaGCCTCTAGCTAGGAAGAACCCCTCGTGCAGCAGTCATCAGCCA +
Preference number: 1 (lower is better)
Translates to: NLPHPPCLQPTEHHR*PLARKNPSCSSHQP
Trigger: TGGCTGATGACTGCTGCACGAGGGGTTCTTCCTAGCTAGAGGCCATCTGTGATGCTCTGTGGGCTGGAGGCAAGGAGGATGTGGTAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CTTAAGATGGTCTTCAGGGCCATGGGAGAAACCAAAAGCCTGTCCTaGTGCCCTCAACTCTCTGGGAGCCAGCATTCTCCCCCAACACTG +
Preference number: 1 (lower is better)
Translates to: LKMVFRAMGETKSLS*CPQLSGSQHSPPTL
Trigger: CAGTGTTGGGGGAGAATGCTGGCTCCCAGAGAGTTGAGGGCAGCAGGACAGGCTTTTGGTTTCTCCCATGGCCCTGAAGACCATCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp ATTCTTGGAGGTGAGGCAGACTCTGCAGGGTGTCGACACCTGCCTTaGATGACTCAGTGTGTCTGTGTGAAGTTGTGCTCACGGTGTGCC +
Preference number: 1 (lower is better)
Translates to: ILGGEADSAGCRHLP*MTQCVCVKLCSRCA
Trigger: GGCACACCGTGAGCACAACTTCACACAGACACACTGAGTCATGCAAGGCAGGTGTCGACACCCTGCAGAGTCTGCCTCACCTCCAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GGTAACCTGAGTCTAGACTCAGCTGAGTGTCCCAGGAACGGGCGCTaGCTGACCTGGAAAATTACCCAGGCACCAACAAAGCCACACACT +
Preference number: 1 (lower is better)
Translates to: GNLSLDSAECPRNGR*LTWKITQAPTKPHT
Trigger: AGTGTGTGGCTTTGTTGGTGCCTGGGTAATTTTCCAGGTCAGCCAGCGCCCGTTCCTGGGACACTCAGCTGAGTCTAGACTCAGGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TTCAGGCCTACCTACCCTAAGTCCCCTTGTCAAGGTCCTCCACTGTaGCAAAGGACACACAGGACCTGGGGCTGTCATGTGGGCATCTTT +
Preference number: 1 (lower is better)
Translates to: FRPTYPKSPCQGPPL*QRTHRTWGCHVGIF
Trigger: AAAGATGCCCACATGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGGGACTTAGGGTAGGTAGGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGGTTATaGGCGTGCGTGACATCCTGGCTTCTTTGCTGGCTGGAGCTGTGC +
Preference number: 1 (lower is better)
Translates to: LLYTQALASFSSLWL*ACVTSWLLCWLELC
Trigger: GCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTaGTTATGGGCGTGCGTGACATCCTGGCTTCTTTGCTGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: VCLLYTQALASFSSL*LWACVTSWLLCWLE
Trigger: CTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CAGGGAAGTCCCTGGGAAGGCACCCTCATTGCTGTGCCTGCCTGCTaGAAGCATGAGAGCATTGAATGTAAGAGCTGTAACTGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: QGSPWEGTLIAVPAC*KHESIECKSCNWSQ
Trigger: CTGGCTCCAGTTACAGCTCTTACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGCCTTCCCAGGGACTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp GCCAGCATCAGGACCAGGCCACCCCAGGTCATCCAACTCTATATGTaGGATGACACTCTCCAGAATTCTCCTACCAGTGAGCAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: ASIRTRPPQVIQLYM*DDTLQNSPTSEQQE
Trigger: CTCCTGCTGCTCACTGGTAGGAGAATTCTGGAGAGTGTCATCTCACATATAGAGTTGGATGACCTGGGGTGGCCTGGTCCTGATGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp GAGACCTTAACTGCAACAGAAAACGCGCAGCTTGGCCTGATCAGATaGGCAGTTGAGGTCTGGCCCCTCCCTCTCTGCCTCACATTCTCA +
Preference number: 1 (lower is better)
Translates to: ETLTATENAQLGLIR*AVEVWPLPLCLTFS
Trigger: TGAGAATGTGAGGCAGAGAGGGAGGGGCCAGACCTCAACTGCTCATCTGATCAGGCCAAGCTGCGCGTTTTCTGTTGCAGTTAAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CCAACTCCTCCAGAATCCTGTACCCTAACGGGATTTCCTCACAGTTaGAGTTACTGGGACACACAGGTGGGAGGTCCCAGGTGTCAGTCA +
Preference number: 1 (lower is better)
Translates to: PTPPESCTLTGFPHS*SYWDTQVGGPRCQS
Trigger: TGACTGACACCTGGGACCTCCCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTACAGGATTCTGGAGGAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGGTTATGGGCGTaGGTGACATCCTGGCTTCTTTGCTGGCTGGAGCTGTGCTGTCCT +
Preference number: 1 (lower is better)
Translates to: YTQALASFSSLWLWA*VTSWLLCWLELCCP
Trigger: AGGACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TTGGCCAGTTTCAGCTCCTTGTGGTTATGGGCGTGCGTGACATCCTaGCTTCTTTGCTGGCTGGAGCTGTGCTGTCCTCCTAAGTCTCTT +
Preference number: 1 (lower is better)
Translates to: LASFSSLWLWACVTS*LLCWLELCCPPKSL
Trigger: AAGAGACTTAGGAGGACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp TGGCTGACCTGGAAAATTACCCAGGCACCAACAAAGCCACACACTTaGACCAGAGCTGAATCCAGAACACCACATATGCACCCTGCCGGG +
Preference number: 1 (lower is better)
Translates to: WLTWKITQAPTKPHT*TRAESRTPHMHPAG
Trigger: CCCGGCAGGGTGCATATGTGGTGTTCTGGATTCAGCTCTGGTTCAAGTGTGTGGCTTTGTTGGTGCCTGGGTAATTTTCCAGGTCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp ACCCATAAGCCAGTTGACTTGGGGCTCAGTCATGGTGGGCTCCTCTaGCAGCTTGACCTCCATAGCTTTTGCTGTGACCATGGAAGATAC +
Preference number: 1 (lower is better)
Translates to: THKPVDLGLSHGGLL*QLDLHSFCCDHGRY
Trigger: GTATCTTCCATGGTCACAGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCCCACCATGACTGAGCCCCAAGTCAACTGGCTTATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CCTCAGTCAGCCCTTTCTAGCTCTTTCCTGATATACCCTCGGGGGTaGCCTTTTCCCACCAGATGTGCCACCTGGAATATGCCACAAGTA +
Preference number: 1 (lower is better)
Translates to: PQSALSSSFLIYPRG*PFPTRCATWNMPQV
Trigger: TACTTGTGGCATATTCCAGGTGGCACATCTGGTGGGAAAAGGGCACCCCCGAGGGTATATCAGGAAAGAGCTAGAAAGGGCTGACTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GTATGGACACCCCAGGAGTGGACTGTCCCAGGATGGCACAGCCCATaGAAGCATTTGGAAGCATTCTGGGGCTGTGTTCTATTCTATGGT +
Preference number: 1 (lower is better)
Translates to: VWTPQEWTVPGWHSP*KHLEAFWGCVLFYG
Trigger: ACCATAGAATAGAACACAGCCCCAGAATGCTTCCAAATGCTTCCATGGGCTGTGCCATCCTGGGACAGTCCACTCCTGGGGTGTCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CAAACGTCCACTGACAGAAGTTCTGCACAGGCTGTAAAAGATCCCTaGGACTTGGAGAGTCCTAGAACTTACCTGCTGAGGGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: QTSTDRSSAQAVKDP*DLESPRTYLLRVAG
Trigger: CCCAGCCACCCTCAGCAGGTAAGTTCTAGGACTCTCCAAGTCCCAGGGATCTTTTACAGCCTGTGCAGAACTTCTGTCAGTGGACGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp AGACAAGATCAGGCAGGGCTTATGCCCACCTGCCCTGCTTCAAGCTaGCTCCCTTCCTGTATTGAAACTGAGTATCTTCAAAAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: RQDQAGLMPTCPASS*LPSCIETEYLQKPG
Trigger: GCCTGGCTTTTGAAGATACTCAGTTTCAATACAGGAAGGGAGGCAGCTTGAAGCAGGGCAGGTGGGCATAAGCCCTGCCTGATCTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp GGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTaGCATCGGCAGGAACCAGTGCCTGGAAAGCGTATGGGGCTCCTG +
Preference number: 1 (lower is better)
Translates to: GWKCLETNTSEVDVV*HRQEPVPGKRMGLL
Trigger: CAGGAGCCCCATACGCTTTCCAGGCACTGGTTCCTGCCGATGCCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TTCCATTTGTGCAAATTAGTGAGCCATCAGCTTAAGTGGGCACGGTaGGAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGT +
Preference number: 1 (lower is better)
Translates to: FHLCKLVSHQLKWAR*EREHGGKGSHCTVS
Trigger: ACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTCCCACCGTGCCCACTTAAGCTGATGGCTCACTAATTTGCACAAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp GAGAGTCCTAGAACTTACCTGCTGAGGGTGGCTGGGAGACTTGAGTaGACTCTTCCCCTATTCCACAGTCCAAACTGTTTCCCTCTTACT +
Preference number: 1 (lower is better)
Translates to: ESPRTYLLRVAGRLE*TLPLFHSPNCFPLT
Trigger: AGTAAGAGGGAAACAGTTTGGACTGTGGAATAGGGGAAGAGTTCACTCAAGTCTCCCAGCCACCCTCAGCAGGTAAGTTCTAGGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp ACAAGGAATAAACAAGGGTTCCCATATCCATCCAAAAGTGCCCTCTaGATTCTTGGAGGTGAGGCAGACTCTGCAGGGTGTCGACACCTG +
Preference number: 1 (lower is better)
Translates to: TRNKQGFPYPSKSAL*ILGGEADSAGCRHL
Trigger: CAGGTGTCGACACCCTGCAGAGTCTGCCTCACCTCCAAGAATTCAGAGGGCACTTTTGGATGGATATGGGAACCCTTGTTTATTCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp TCTGGCCCCTCCCTCTCTGCCTCACATTCTCAGGACAATGTGTATTaGGTATTAGCAAACCACTTCCTTCCCATGAACAAGGAGCCCACA +
Preference number: 1 (lower is better)
Translates to: SGPSLSASHSQDNVY*VLANHFLPMNKEPT
Trigger: TGTGGGCTCCTTGTTCATGGGAAGGAAGTGGTTTGCTAATACTCAATACACATTGTCCTGAGAATGTGAGGCAGAGAGGGAGGGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TTATGGGCGTGCGTGACATCCTGGCTTCTTTGCTGGCTGGAGCTGTaGTGTCCTCCTAAGTCTCTTCAATGTATTTCATGTCCTCATCTT +
Preference number: 1 (lower is better)
Translates to: LWACVTSWLLCWLEL*CPPKSLQCISCPHL
Trigger: AAGATGAGGACATGAAATACATTGAAGAGACTTAGGAGGACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp AGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGCACGTGTaGTTCCTGACCTCACAGGAAGTAGGCGGGTTTGGAATTGCTGAT +
Preference number: 1 (lower is better)
Translates to: RLFITKPQGTLWLHV*FLTSQEVGGFGIAD
Trigger: ATCAGCAATTCCAAACCCGCCTACTTCCTGTGAGGTCAGGAACCACACGTGCAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CTGATATACCCTCGGGGGTGCCCTTTTCCCACCAGATGTGCCACCTaGAATATGCCACAAGTACCTTTCAATGTTGCAACACTGAAACAA +
Preference number: 1 (lower is better)
Translates to: LIYPRGCPFPTRCAT*NMPQVPFNVATLKQ
Trigger: TTGTTTCAGTGTTGCAACATTGAAAGGTACTTGTGGCATATTCCAGGTGGCACATCTGGTGGGAAAAGGGCACCCCCGAGGGTATATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp ATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCATGTaGAGTTACCACCTACTCTGCACAATAGTCAACATACACCCAAAC +
Preference number: 1 (lower is better)
Translates to: ILFPPQSLDGHPPGM*SYHLLCTIVNIHPN
Trigger: GTTTGGGTGTATGTTGACTATTGTGCAGAGTAGGTGGTAACTCCACATGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp CAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATaGCTGCACGTGTGGTTCCTGACCTCACAGGAAGTAGGCGGGTTT +
Preference number: 1 (lower is better)
Translates to: QVKRRLFITKPQGTL*LHVWFLTSQEVGGF
Trigger: AAACCCGCCTACTTCCTGTGAGGTCAGGAACCACACGTGCAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp CTAATTCTCAGCAAATGGCTGGAAATGTTTGGAAACCAATACATCTaGAGTGGATGTAGTCTGGCATCGGCAGGAACCAGTGCCTGGAAA +
Preference number: 1 (lower is better)
Translates to: LILSKWLEMFGNQYI*SGCSLASAGTSAWK
Trigger: TTTCCAGGCACTGGTTCCTGCCGATGCCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGCTGAGAATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CACCAGATGTGCCACCTGGAATATGCCACAAGTACCTTTCAATGTTaGAACACTGAAACAAACCATCACGACCCTCAGTCACATAAAACA +
Preference number: 1 (lower is better)
Translates to: HQMCHLEYATSTFQC*NTETNHHDPQSHKT
Trigger: TGTTTTATGTGACTGAGGGTCGTGATGGTTTGTTTCAGTGTTGCAACATTGAAAGGTACTTGTGGCATATTCCAGGTGGCACATCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp TCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATaGAGTCTAAGAGATTTCTGGAGTCAGTCTCAGATAGCATGTCCG +
Preference number: 1 (lower is better)
Translates to: SKWPANVLAGNPTSL*SLRDFWSQSQIACP
Trigger: CGGACATGCTATCTGAGACTGACTCCAGAAATCTCTTAGACTTCATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp TCAGTCCAACAAGACAAGAGAGACAGGAGCAACAGGGTCTCTTTATaGACCCAGACCAGAATGATGCTATTATATCGGTCTTTTTGCAAA +
Preference number: 1 (lower is better)
Translates to: SVQQDKRDRSNRVSL*TQTRMMLLYRSFCK
Trigger: TTTGCAAAAAGACCGATATAATAGCATCATTCTGGTCTGGGTGCATAAAGAGACCCTGTTGCTCCTGTCTCTCTTGTCTTGTTGGACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp ACAGTAAGGAATTTCAAGGCATGCAATTCCGTAGTGCAAATGGCTTaGATATACTCAATTTTAACAGGGATGAAGGCAACAGAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: TVRNFKACNSVVQMA*IYSILTGMKATEQA
Trigger: GGCCTGCTCTGTTGCCTTCATCCCTGTTAAAATTGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTGAAATTCCTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp AATGAACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTaGTCACAAGGAATAAACAAGGGTTCCCATATCCATCCAAAAGTG +
Preference number: 1 (lower is better)
Translates to: NEPQSDRSHLLLLDL*SQGINKGSHIHPKV
Trigger: CACTTTTGGATGGATATGGGAACCCTTGTTTATTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 90 bp TTTAGTGACAGAATGTGGCACTTGAAGTTGGATCTGAAGCATTTATaGAATGAACCACAGAGTGACAGATCTCATCTCCTATTATTGGAC +
Preference number: 1 (lower is better)
Translates to: FSDRMWHLKLDLKHL*NEPQSDRSHLLLLD
Trigger: GTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTTCATTCCATAAATGCTTCAGATCCAACTTCAAGTGCCACATTCTGTCACTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 90 bp GACTGGAAGGTGCTCTACAGAGTTGACATAAAAATAGACCCGTATTaGTTATACAAATCTATTGTGAGAGGTTACCCAGTGATATTGAGT +
Preference number: 1 (lower is better)
Translates to: DWKVLYRVDIKIDPY*LYKSIVRGYPVILS
Trigger: ACTCAATATCACTGGGTAACCTCTCACAATAGATTTGTATAATCAATACGGGTCTATTTTTATGTCAACTCTGTAGAGCACCTTCCAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 90 bp CGTCAAATTCAAACTAAGGTGCACACAGTAAGGAATTTCAAGGCATaGAATTCCGTAGTGCAAATGGCTTGCATATACTCAATTTTAACA +
Preference number: 1 (lower is better)
Translates to: RQIQTKVHTVRNFKA*NSVVQMACIYSILT
Trigger: TGTTAAAATTGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTGAAATTCCTTACTGTGTGCACCTTAGTTTGAATTTGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGGGGGTCCGGAAGCCCTaGTGGCTTTGGAGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVGVRKP*WLWSLR
Trigger: TCTCAGACTCCAAAGCCACCAGGGCTTCCGGACCCC...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCGCTGCAGTGGAGTGCTaGAGTCAGTCTGGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAAAVEC*SQSGPG
Trigger: GCCAGGGCCAGACTGACTTCAGCACTCCACTGCAGC...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGCTTTCTGTCCACTTCTaGGGGGCCCTGTGTCCACAC +
Preference number: 2 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRLSVHF*GALCPH
Trigger: GTGTGGACACAGGGCCCCTCAGAAGTGGACAGAAAG...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGCATGGTGGGCTCCTCTaGCAGCTTGACCTCCATAGC +
Preference number: 2 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVHGGLL*QLDLHS
Trigger: GCTATGGAGGTCAAGCTGGCAGAGGAGCCCACCATG...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGGGGCTGAGTGGAGGTTaGTGGTGGGAGGTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVGLSGG*WWEVRN
Trigger: GTTTCTCACCTCCCACCAGCAACCTCCACTCAGCCC...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACAGGGCTCCCCACAGCATaGGAACGGTCCCCTGAGACT +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATGLPTA*ERSPET
Trigger: AGTCTCAGGGGACCGTTCCCATGCTGTGGGGAGCCC...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACAGGGCTCCACGGAACCTaGGATTGGCTGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATGLHGT*DWLRAA
Trigger: TGCTGCCCTCAGCCAATCCCAGGTTCCGTGGAGCCC...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCCCTGCTCTCCAACCCTaGAGGCTGCAGTGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAPALQP*RLQWSA
Trigger: AGCACTCCACTGCAGCCTTCAGGGTTGGAGAGCAGG...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGCTTGGAGACTTGGCATaGAGCCTCCAGCTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRLGDLA*SLQLSL
Trigger: AAGGGAGAGCTGGAGGCTGCATGCCAAGTCTCCAAG...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGGCTTCAAGCAACTCTTaGCCACAAGAGACCCGCGTC +
Preference number: 2 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVASSNS*PQETRV
Trigger: GACGCGGGTCTCTTGTGGGCAAGAGTTGCTTGAAGC...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CATGGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCAGCTGTGCCCATGGTATaGACAGCTCAACTGTCATGG +
Preference number: 2 (lower is better)
Translates to: HGTGRGGPTVAAVRSQQPAVPMV*TAQLSW
Trigger: CCATGACAGTTGAGCTGTTCATACCATGGGCACAGC...TGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp CCCTTGTCAAGGTCCTCCACTGTGGCAAAGGACACACAGGACCTGGGGCTGTCAGCAGCCAGGAGGGGTTaGAAGAGAATGTACGGGCCA +
Preference number: 2 (lower is better)
Translates to: PLSRSSTVAKDTQDLGLSAARRG*KRMYGP
Trigger: TGGCCCGTACATTCTCTTCCAACCCCTCCTGGCTGC...TGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGAGGTGCCTCAGTTCCTaGATTGAGACCTCTTTCGCC +
Preference number: 2 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVRCLSS*IETSFA
Trigger: GGCGAAAGAGGTCTCAATCCAGGAACTGAGGCACCT...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp ATGGCCCTGCCCAGCGGGGCCAACTTCCCAGTCTGGCACTCATACTaGAAACTGCTACCCAGGCTTGGAGTTACCCATAAGCCAGGACCT +
Preference number: 2 (lower is better)
Translates to: MALPSGANFPVWHSY*KLLPRLGVTHKPGP
Trigger: AGGTCCTGGCTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTTGCCCTGCTTCAAGCTaGCTCCCTTCCTGTATTGAA +
Preference number: 2 (lower is better)
Translates to: FTAAPPGPRAPEVQPQRLCPASS*LPSCIE
Trigger: TTCAATACAGGAAGGGAGGCAGCTTGAAGCAGGGCA...AAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGTTCAGAACAGTCCTGTaGCCAGAGAAGGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRFRTVL*PEKAVS
Trigger: TGACACTGCCTTCTCTGGGCACAGGACTGTTCTGAA...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACATGTAAGAGCTGTAACTaGAGCCAGGCTGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATCKSCN*SQAGWA
Trigger: TGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACA...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp GCATCTTTCTGTCCACTTCTGAGGGGCCCTGTGTCCACACTAAACCCATTGGTGCTGGGTGCTCCTGGCTaGGCTGACTGCAAGACAGAC +
Preference number: 2 (lower is better)
Translates to: ASFCPLLRGPVSTLNPLVLGAPG*ADCKTD
Trigger: GTCTGTCTTGCAGTCAGCTCAGCCAGGAGCACCCAG...CACCAATGGGTTTAGTGTGGACACAGGGCCCCTCAGAAGTGGACAGAAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCAGACAGAGCTCAGTGTaGCCCAAGGGGTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LGHMLQMWASSNSCPQETRQSSV*PKGWLG
Trigger: CCCAAGCCACCCCTTGGGGCACACTGAGCTCTGTCT...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTGAATTCCAGAAGACCTaGCTCTGGCTGTTAGCAAGA +
Preference number: 2 (lower is better)
Translates to: FTAAPPGPRAPEVQPQRLEFQKT*LWLLAR
Trigger: TCTTGCTAACAGCCAGAGGCAGGTCTTCTGGAATTC...AAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GCAGGGTGGGCATGGGTCAGAGTTCCTCTGCAGAAGGTGCTAGATGATACCCTTCTTGGCTCCTCTGTCTaGTCCTGGCTAGAGCCATGG +
Preference number: 2 (lower is better)
Translates to: AGWAWVRVPLQKVLDDTLLGSSV*SWLEPW
Trigger: CCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAG...AAGGGTATCATCTAGCACCTTCTGCAGAGGAACTCTGACCCATGCCCACCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACACAAGAGGGGCTGAAGTaGGTACCAGGCTTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATQEGLK*VPGFSS
Trigger: TGAGGAAAAGCCTGGTACCCACTTCAGCCCCTCTTG...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACAGCCCATGGAAGCATTTaGAAGCATTCTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATAHGSI*KHSGAV
Trigger: CACAGCCCCAGAATGCTTCCAAATGCTTCCATGGGC...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACACTGGGCAGTGTGGCTTaGGCTCTACAGGAATGTCAT +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATLGSVA*ALQECH
Trigger: ATGACATTCCTGTAGAGCCCAAGCCACACTGCCCAG...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp AGGTCATTAGGAAGAGACAGAGCTCAGTGTGCCCCAAGGGGTGGCTaGGGCACATTTCCCATTGGCCTCAGGCCACACTCAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: RSLGRDRAQCAPRGG*GTFPIGLRPHSDNA
Trigger: AGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATGTGCCCAAGCCACCCCTTGGGGCACACTGAGCTCTGTCTCTTCCTAATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp CTGCCCTATTCTAAGAAGATAGGACCCTTGGAAGGGGGCAAGCTCTaGGGGAGCCGTGAGGAAATGGGCCTCCACAGACAAGATCAGGCA +
Preference number: 2 (lower is better)
Translates to: LPYSKKIGPLEGGKL*GSREEMGLHRQDQA
Trigger: TGCCTGATCTTGTCTGTGGAGGCCCATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCAAGGGTCCTATCTTCTTAGAATAGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp AAGGCACCCTCATTGCTGTGCCTGCCTGCTGGAAGCATGAGAGCATaGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: KAPSLLCLPAGSMRA*NVRAVTGARLAGQC
Trigger: ACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTGAAGCCGCTCATATCTaGCAGCCAAGCCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLEAAHI*QPSPQP
Trigger: AGGCTGTGGGCTTGGCTGGCAGATATGAGCGGCTTC...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTTCCTGGCTAGAGCCATaGTGGCTTGTGACACCCTGG +
Preference number: 2 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLSWLEP*WLVTPW
Trigger: CCAGGGTGTCACAAGCCACCATGGCTCTAGCCAGGA...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCTGGTCTTCAGGGCCATaGGAGAAACCAAAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAWSSGP*EKPKAC
Trigger: ACAGGCTTTTGGTTTCTCCCATGGCCCTGAAGACCA...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACACCTTGTTCTTCCCACTaGATAACCCAGACAGGCAAC +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATPCSSH*ITQTGN
Trigger: GTTGCCTGTCTGGGTTATCCAGTGGGAAGAACAAGG...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp ACCAACTCCTCCAGAATCCTGTACCCTAACGGGATTTCCTCACAGTaGCAGTTACTGGGACACACAGGTGGGAGGTCCCAGGTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: TNSSRILYPNGISSQ*QLLGHTGGRSQVSV
Trigger: GACTGACACCTGGGACCTCCCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTACAGGATTCTGGAGGAGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp ATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTaGTGGTTATGGGCGTGCGTGACATCCTGGCTTCTTTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: MVCLLYTQALASFSS*WLWACVTSWLLCWL
Trigger: CAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGCTAGCCACAGTGGGCTaGCAGAAAGGCAGCCGACAA +
Preference number: 2 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVLATVG*QKGSRQ
Trigger: TTGTCGGCTGCCTTTCTGTCAGCCCACTGTGGCTAG...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCATCTTTCTGTCCACTTCTGAGGGGCCCTGTGTCCACACTAAACCCATTGGTGGGCACTAGTTCTGGGTaGCTAGAAGCCACTCTGAGG +
Preference number: 2 (lower is better)
Translates to: ASFCPLLRGPVSTLNPLVGTSSG*LEATLR
Trigger: CCTCAGAGTGGCTTCTAGGCACCCAGAACTAGTGCC...CACCAATGGGTTTAGTGTGGACACAGGGCCCCTCAGAAGTGGACAGAAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTGGCTCCTGTGTGGTCTaGTTCAGAACAGTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLGSCVV*FRTVLC
Trigger: GCACAGGACTGTTCTGAAGCAGACCACACAGGAGCC...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCAGTGCAATCTTAAGATaGTCTTCAGGGCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: SHAYLGSGSEESAPSQSASAILR*SSGPWE
Trigger: CTCCCATGGCCCTGAAGACCATCTTAAGATTGCACT...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp AGAATTCCAGAAGACCTGCCTCTGGCTGTTAGCAAGAGCCTACTCTaGGGGAAAGCCAGCAACCCCGCTCTTCATGCAGTAAGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: RIPEDLPLAVSKSLL*GKASNPALHAVRGV
Trigger: GACACCTCTTACTGCATGAAGAGCGGGGTTGCTGGCTTTCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTTCTGGAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTGCTGGGAGACTTGAGTaGACTCTTCCCCTATTCCAC +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLAGRLE*TLPLFH
Trigger: GTGGAATAGGGGAAGAGTTCACTCAAGTCTCCCAGC...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTGACGATGAAGCTACCTaGTCTCCAACCCTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLDDEAT*SPTLKA
Trigger: AGCCTTCAGGGTTGGAGAGCAGGTAGCTTCATCGTC...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACATCTTTGCTGTGCCCATaGTATGAACAGCTCAACTGT +
Preference number: 2 (lower is better)
Translates to: EREHGGKGSHCTVSAGATSLLCP*YEQLNC
Trigger: ACAGTTGAGCTGTTCATACCATGGGCACAGCAAAGA...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCAAAAGCAGGGTGGGCATaGGTCAGAGTTCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPAKAGWA*VRVPLQ
Trigger: CTGCAGAGGAACTCTGACCCATGCCCACCCTGCTTT...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp TCCACTGACAGAAGTTCTGCACAGGCTGTAAAAGATCCCTGGGACTaGGAGAGTCCTAGAACTTACCTGCTGAGGGTGGCTGGGAGACTT +
Preference number: 2 (lower is better)
Translates to: STDRSSAQAVKDPWD*ESPRTYLLRVAGRL
Trigger: AAGTCTCCCAGCCACCCTCAGCAGGTAAGTTCTAGGACTCTCCAAGTCCCAGGGATCTTTTACAGCCTGTGCAGAACTTCTGTCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTCCAGCTCTCCCTTGCTaGAAGTTTTCTTCCTACCCA +
Preference number: 2 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLPALPC*KFSSYP
Trigger: TGGGTAGGAAGAAAACTTTCAGCAAGGGAGAGCTGG...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCAATAAGCCAGTTGACTTaGGGCTCAGTCATGGTGGGC +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPAISQLT*GSVMVG
Trigger: GCCCACCATGACTGAGCCCCAAGTCAACTGGCTTAT...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGCAGAAGACCTGCCTCTaGCTGTTAGCAAGAGCCTAC +
Preference number: 2 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVQKTCL*LLARAY
Trigger: GTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTTCTG...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTTCCTCAGAGTTTGGATaGACACCCACCCGGCATGTG +
Preference number: 2 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSSSEFG*TPTRHV
Trigger: CACATGCCGGGTGGGTGTCCATCCAAACTCTGAGGA...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp GTCTGGCCCCTCCCTCTCTGCCTCACATTCTCAGGACAATGTGTATaGAGTATTAGCAAACCACTTCCTTCCCATGAACAAGGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: VWPLPLCLTFSGQCV*SISKPLPSHEQGAH
Trigger: GTGGGCTCCTTGTTCATGGGAAGGAAGTGGTTTGCTAATACTCAATACACATTGTCCTGAGAATGTGAGGCAGAGAGGGAGGGGCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTTTGCCTTCTGAACTCTaGGTCCAAGGACATCTCCAA +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLLPSEL*VQGHLQ
Trigger: TTGGAGATGTCCTTGGACTCAGAGTTCAGAAGGCAA...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTCTATTTCCAGCCAGTTaGTTCCTACCAACTCCTCCA +
Preference number: 2 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLLFPAS*FLPTPP
Trigger: TGGAGGAGTTGGTAGGAAGCAACTGGCTGGAAATAG...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTTCCAACCCTGAAGGCTaGAGTGGAGTGCTGAAGTCA +
Preference number: 2 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSSNPEG*SGVLKS
Trigger: TGACTTCAGCACTCCACTGCAGCCTTCAGGGTTGGA...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCACACAAGCTCCATCCCTaGCCACAGAGAATGTGCAAT +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPAHKLHP*PQRMCN
Trigger: ATTGCACATTCTCTGTGGCCAGGGATGGAGCTTGTG...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TTCAATGTATTTCATGTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTGGAAGGATAGGAACACCTaGGGACGGGCAGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: FNVFHVLIFRSATETQSWKDRNT*GRAGGR
Trigger: CCTGCCTCCTGCCCGTCCCCAGGTGTTCCTATCCTT...CCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGACATGAAATACATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCACTAGGTCTGTGCCTCTaGATCCACATTGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPALGLCL*IHIGLG
Trigger: ACCAAGACCAATGTGGATCCAGAGGCACAGACCTAG...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp TTCAATGTATTTCATGTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTGGACACTGTGCCGACTCTaGAACCACCAAGAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: FNVFHVLIFRSATETQSWTLCRL*NHQEES
Trigger: GCTCTCCTCTTGGTGGTTTCAGAGTCGGCACAGTGT...CCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGACATGAAATACATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATGAGACCTCTTTCGCCTaGGAGGTTCTTTCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYETSFA*EVLSPG
Trigger: GCCTGGGGAAAGAACCTCTCAGGCGAAAGAGGTCTC...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTTCATCGTGTCTGCTGTaGACATATCAACACGTTTTC +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLSSCLL*TYQHVF
Trigger: GAAAACGTGTTGATATGTTCACAGCAGACACGATGA...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATTGGCTAGAGCCATGGTaGCTTGTGACACCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYWLEPW*LVTPWS
Trigger: GCTCCAGGGTGTCACAAGCCACCATGGCTCTAGCCA...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCATCAAGTGTCCCAAGTaGCAGCTCACTATATTCAAA +
Preference number: 2 (lower is better)
Translates to: LGHMLQMWASSNSCPQETIKCPK*QLTIFK
Trigger: TTTGAATATAGTGAGCTGTCACTTGGGACACTTGAT...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATGGAGCATTCTTGCCTTaGATGCATCTCCAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYGAFLP*MHLQWP
Trigger: GGGCCACTGGAGATGCATGCAAGGCAAGAATGCTCC...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTGCTAGAGAAGCAAGATaGTTCAAAGACCCACATAAT +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLAREAR*FKDPHN
Trigger: ATTATGTGGGTCTTTGAAGCATCTTGCTTCTCTAGC...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGGGGCACATTTCCCATTaGCCTCAGGCCACACTCAGA +
Preference number: 2 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWGHISH*PQATLR
Trigger: TCTGAGTGTGGCCTGAGGCCAATGGGAAATGTGCCC...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGTCTTTCCCATCACCCTaGAGCAGGGACACCACACCT +
Preference number: 2 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWSFPSP*SRDTTP
Trigger: AGGTGTGGTGTCCCTGCTCCAGGGTGATGGGAAAGA...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATGTGCTGAAGTCAGTCTaGCCCTGGCTCTGGGTTCTA +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYVLKSV*PWLWVL
Trigger: TAGAACCCAGAGCCAGGGCCAGACTGACTTCAGCAC...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGTCAGCTCCTAGAACATaGAGGGCAGGGAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWSAPRT*RAGKGS
Trigger: TGAGCCCTTCCCTGCCCTCCATGTTCTAGGAGCTGA...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp TTGGTCCATGTGGCACTGGTTGACTATGTAGGTACAGGAGTTGCTTaGGGTCAAACAGCATCCATTTCAACCACATTCATCGTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: LVHVALVDYVGTGVA*GQTASISTTFIVSA
Trigger: AGCAGACACGATGAATGTGGTTGAAATGGATGCTGTTTGACCCAAAGCAACTCCTGTACCTACATAGTCAACCAGTGCCACATGGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTGGAACGGGCGCTGGCTaGCCTGGAAAATTACCCAGG +
Preference number: 2 (lower is better)
Translates to: ASKTHIISKLPSLLFINFGTGAG*PGKLPR
Trigger: CCTGGGTAATTTTCCAGGTCAGCCAGCGCCCGTTCC...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTTGGCTCAGAGGAATCTaGCCCTTCTCAGAGCGCCCC +
Preference number: 2 (lower is better)
Translates to: ASKTHIISKLPSLLFINFWLRGI*PFSERP
Trigger: GGGGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCA...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGCTGAATGTGCAGCCATaGCACAGGAAGAGGAGGGCC +
Preference number: 2 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLLNVQP*HRKRRA
Trigger: GGCCCTCCTCTTCCTGTGCCATGGCTGCACATTCAG...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCAGATCTGAAGCATTTATaGAATGAACCACAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPADLKHL*NEPQSD
Trigger: GTCACTCTGTGGTTCATTCCATAAATGCTTCAGATC...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp ACTCGTGGGTATAGTGGGTCAATCGCTCTTAGCATAAACGAAGGCTaGATTCTTGTTAGACTTACAGCGTCCAAGACACCACAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TRGYSGSIALSINEG*ILVRLTASKTPQRR
Trigger: TCTTCTCTGTGGTGTCTTGGACGCTGTAAGTCTAACAAGAATCAAGCCTTCGTTTATGCTAAGAGCGATTGACCCACTATACCCACGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGGAACTCCAGGCTGTGTaGGAGGTTCTCTACCCTCCT +
Preference number: 2 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLELQAV*EVLYPP
Trigger: AGGAGGGTAGAGAACCTCTCACACAGCCTGGAGTTC...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTGCCACACTCAGACAATaGTTCTCCTCCAGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: ASKTHIISKLPSLLFINFATLRQ*FSSSPA
Trigger: GGCTGGGCTGGAGGAGAAGCATTGTCTGAGTGTGGC...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATACCAGCTCTTTGCTGTaGCCATGGTATGAACAGCTC +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYTSSLL*PWYEQL
Trigger: GAGCTGTTCATACCATGGGCACAGCAAAGAGCTGGT...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TTCAATGTATTTCATGTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTGGGGATTTCCTCACAGTTaGAGTTACTGGGACACACAG +
Preference number: 2 (lower is better)
Translates to: FNVFHVLIFRSATETQSWGFPHS*SYWDTQ
Trigger: CTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCC...CCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGACATGAAATACATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTTATGCCCACCTGCCCTaGTTCAAGCTGCCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: ASKTHIISKLPSLLFINFYAHLP*FKLPPF
Trigger: GAAGGGAGGCAGCTTGAAGCAGGGCAGGTGGGCATA...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGCACGTGACCTAGGCTGGCTCTaGTCAGCGTCATATAGGTCA +
Preference number: 2 (lower is better)
Translates to: SKKKVVYHQTPRYIMAARDLGWL*SASYRS
Trigger: TGACCTATATGACGCTGAGCAGAGCCAGCCTAGGTC...ACGTGCAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCATTAGGTTATGGTTATTaGTTCTATGACAGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPALGYGY*FYDRRG
Trigger: ACCCCTTCTGTCATAGAAGCAATAACCATAACCTAA...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTAGTACCTTTCAATGTTaGAACACTGAAACAAACCAT +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLSTFQC*NTETNH
Trigger: ATGGTTTGTTTCAGTGTTGCAACATTGAAAGGTACT...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTCCAAGCTGCCATCCTTaGTCTTTATTAATTTTATCA +
Preference number: 2 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLPSCHP*SLLILS
Trigger: TGATAAAATTAATAAAGAGCAAGGATGGCAGCTTGG...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTAGTTACCACCTACTCTaGACAATAGTCAACATACAC +
Preference number: 2 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSSYHLL*TIVNIH
Trigger: GTGTATGTTGACTATTGTGCAGAGTAGGTGGTAACT...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp CTCTTTATGCACCCAGACCAGAATGATGCTATTATATCGGTCTTTTaGCAAAAGAGACTTAGTAGTAGGCTGAGTGGCTCAGGGATGTGC +
Preference number: 2 (lower is better)
Translates to: LFMHPDQNDAIISVF*QKRLSSRLSGSGMC
Trigger: GCACATCCCTGAGCCACTCAGCCTACTACTAAGTCTCTTTTGCAAAAAGACCGATATAATAGCATCATTCTGGTCTGGGTGCATAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAACACACCCCTCCTCTCTaGATGTGCAGCCATGGCACA +
Preference number: 2 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKHTPPL*MCSHGT
Trigger: TGTGCCATGGCTGCACATTCAGAGAGGAGGGGTGTG...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTAAAAGCCTGTCCTGCTaGCCTCAACTCTCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: ASKTHIISKLPSLLFINFKSLSC*PQLSGS
Trigger: GCTCCCAGAGAGTTGAGGGCAGCAGGACAGGCTTTT...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGTGCTGGCTGGAGCTGTaGTGTCCTCCTAAGTCTCTT +
Preference number: 2 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLCWLEL*CPPKSL
Trigger: AAGAGACTTAGGAGGACAGCACAGCTCCAGCCAGCA...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGACATCCTGGCTTCTTTaGTGGCTGGAGCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLTSWLL*WLELCC
Trigger: ACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGT...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAAGCACCCTCATTGCTGTaGCTGCCTGCTGGAAGCATG +
Preference number: 2 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKAPSLL*LPAGSM
Trigger: CATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGC...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp CACAGTAAGGAATTTCAAGGCATGCAATTCCGTAGTGCAAATGGCTaGCATATACTCAATTTTAACAGGGATGAAGGCAACAGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: HSKEFQGMQFRSANG*HILNFNRDEGNRAG
Trigger: GCCTGCTCTGTTGCCTTCATCCCTGTTAAAATTGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTGAAATTCCTTACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp AACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTGCTCACAAGGAAGCCAAGCACACCCTTTaGAAGTTGAAGCCATTAAAA +
Preference number: 2 (lower is better)
Translates to: NHRVTDLISYYWTCAHKEAKHTL*KLKPLK
Trigger: TTTTAATGGCTTCAACTTGCAAAGGGTGTGCTTGGC...TTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATTGTAGGTACAGGAGTTaGTTTGGGTCAAACAGCATC +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYCRYRS*FGSNSI
Trigger: GATGCTGTTTGACCCAAAGCAACTCCTGTACCTACA...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGGGTTTGACACACGCATaGGTGATTGCAGTGTTATCG +
Preference number: 2 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLGLTHA*VIAVLS
Trigger: CGATAACACTGCAATCACGCATGCGTGTGTCAAACC...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp ATAGCAATCTCACATGCACAGGTAGTTTCTGGAATAGCAATCTGCTaGGGCCAGACTTGTCTCTACAGTATTAGGTTATGGTTATTGCTT +
Preference number: 2 (lower is better)
Translates to: IAISHAQVVSGIAIC*GQTCLYSIRLWLLL
Trigger: AAGCAATAACCATAACCTAATACTGTAGAGACAAGTCTGGCCCAAGCAGATTGCTATTCCAGAAACTACCTGTGCATGTGAGATTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp TGCCATCCTTGCTCTTTATTAATTTTATCAAGCCAAGCACACCCTTaGCAAGTTGAAGCCATTAAAAAGCACGAGCAAGTCAGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: CHPCSLLILSSQAHP*QVEAIKKHEQVSFW
Trigger: CCAGAAACTGACTTGCTCGTGCTTTTTAATGGCTTCAACTTGCAAAGGGTGTGCTTGGCTTGATAAAATTAATAAAGAGCAAGGATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp CATTTATGGAATGAACCACAGAGTGACAGATCTCATCTCCTATTATaGGACCTGTGCTCACAAGGAATAAACAAGGGTTCCCATATCCAT +
Preference number: 2 (lower is better)
Translates to: HLWNEPQSDRSHLLL*DLCSQGINKGSHIH
Trigger: ATGGATATGGGAACCCTTGTTTATTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTTCATTCCATAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGCATTTGGAAGCATTCTaGGGCTGTGTTCTATTCTAT +
Preference number: 2 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWHLEAF*GCVLFY
Trigger: ATAGAATAGAACACAGCCCCAGAATGCTTCCAAATG...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 90 bp CATCAACCTCCTGCCAAGCCTATAGTTGTAAATAGAAATGAGCTATaGGTTCAAGCCTGCTATAGAAACATTCAAAGCCAATCACAGCTA +
Preference number: 2 (lower is better)
Translates to: HQPPAKPIVVNRNEL*VQACYRNIQSQSQL
Trigger: TAGCTGTGATTGGCTTTGAATGTTTCTATAGCAGGCTTGAACCAATAGCTCATTTCTATTTACAACTATAGGCTTGGCAGGAGGTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATCTCTCATATTCCCTATaGAAATTGTGTGTGTGTACA +
Preference number: 2 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYLSYSL*KLCVCT
Trigger: TGTACACACACACAATTTTCATAGGGAATATGAGAG...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR GCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGCTATTATTGGACCTGTaGTCACAAGGAATAAACAAG +
Preference number: 2 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWLLLDL*SQGINK
Trigger: CTTGTTTATTCCTTGTGAGCACAGGTCCAATAATAG...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR TCA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAAGGAAACCAATACATCTaGAGTGGATGTAGTCTGGCA +
Preference number: 2 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKGNQYI*SGCSLA
Trigger: TGCCAGACTACATCCACTTCAGATGTATTGGTTTCC...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CGGTGGGAAAGGGAGCACGGTGGGAAAGGGAGCCACTaGACAGTAAGTGCTGGAGCCACACGGGCTCCACGG +
Preference number: 3 (lower is better)
Translates to: RWEREHGGKGSH*TVSAGATRAPR
Trigger: CCGTGGAGCCCGTGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTCCCACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTaGAGCCTCAAAGACTTGGAGACTTGGCATGCAGCC +
Preference number: 3 (lower is better)
Translates to: SQLPHPALGHLR*SLKDLETWHAA
Trigger: GGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp AGGCAACAGAGCAGGCCCCTCTTCCCCAGGCATGTGTaGTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: RQQSRPLFPRHV*SWWPVVPTLPV
Trigger: CACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAAGAGGGGCCTGCTCTGTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGTATaGAAGAGATGCTGGGGGCTTCCTTGGGCTCCCCAC +
Preference number: 3 (lower is better)
Translates to: LVASCAHTASGV*KRCWGLPWAPH
Trigger: GTGGGGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGGCCAGTTTCAGCTCCTaGTGGTTATGGGCGTGCGTG +
Preference number: 3 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRASFSS*WLWACV
Trigger: CACGCACGCCCATAACCACAAGGAGCTGAAACTGGC...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGGACCCTTGGAAGGGGGCAAGCTCTTGGGGAGCCGTaGGGAAATGGGCCTCCACAGACAAGATCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: RTLGRGQALGEP*GNGPPQTRSGR
Trigger: CCTGCCTGATCTTGTCTGTGGAGGCCCATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCAAGGGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TCAGGAGTGAATCCTCTGGCCAGGCCACACACCTTCTaGCGTCCCCTAGGAAGGCTCCTGGCTCTAGGTCTG +
Preference number: 3 (lower is better)
Translates to: SGVNPLARPHTF*RPLGRLLALGL
Trigger: CAGACCTAGAGCCAGGAGCCTTCCTAGGGGACGGCAGAAGGTGTGTGGCCTGGCCAGAGGATTCACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTGCCCACACTGCCAGTGGTGTATGCAAGAGATGCTaGGGGCTTCCTTGGGCTCCCCACAGCATGGGAACG +
Preference number: 3 (lower is better)
Translates to: CAHTASGVCKRC*GLPWAPHSMGT
Trigger: CGTTCCCATGCTGTGGGGAGCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTaGTGTATGCAAGAGATGCTGGGGGCTTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: CAPGGQLCPHCQ*CMQEMLGASLG
Trigger: GCCCAAGGAAGCCCCCAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CATGGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCAGGCTCCTCTGCCAGCTaGACCTCCATAGCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: HGTGRGGPTVAAVRSQQPGSSAS*TSIAFA
Trigger: AGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCC...TGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CATCACCCTGGAGCAGGGACACCACACCTAGACTCAGGAATGCACACTGTGCCGAGCAGCCAGGAGGGGTaGGAAGAGAATGTACGGGCC +
Preference number: 3 (lower is better)
Translates to: HHPGAGTPHLDSGMHTVPSSQEG*EENVRA
Trigger: GGCCCGTACATTCTCTTCCAACCCCTCCTGGCTGCT...CGGCACAGTGTGCATTCCTGAGTCTAGGTGTGGTGTCCCTGCTCCAGGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGGCCTCTGGATCCACATaGGTCTTGGTCCATGTGGCA +
Preference number: 3 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVASGST*VLVHVA
Trigger: TGCCACATGGACCAAGACCAATGTGGATCCAGAGGC...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp CACCGGAGGACGATGAAGCTACCTGCTCTCCAACCCTaGAGGCTGCAGTGGAGTGCTGAAGTCAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: HRRTMKLPALQP*RLQWSAEVSLA
Trigger: GGCCAGACTGACTTCAGCACTCCACTGCAGCCTTCAGGGTTGGAGAGCAGGTAGCTTCATCGTCCTCCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp ACCTGGGATTGGCTGAGGGCAGCACTGTGCTCCCAATaGGCGGTAGAGGTGACTTGGGAACAAGCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: TWDWLRAALCSQ*AVEVTWEQAQA
Trigger: GGCTTGGGCTTGTTCCCAAGTCACCTCTACCGCTCATTGGGAGCACAGTGCTGCCCTCAGCCAATCCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GGGGACGGGCAGGAGGCAGGAGCCACAAAGAAAGAGTaGTCGCATGCCTACCTAGGTTCTGGCTCAGAGGAA +
Preference number: 3 (lower is better)
Translates to: GDGQEAGATKKE*SHAYLGSGSEE
Trigger: TTCCTCTGAGCCAGAACCTAGGTAGGCATGCGAGCACTCTTTCTTTGTGGCTCCTGCCTCCTGCCCGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TGCCGTCCCCTAGGAAGGCTCCTGGCTCTAGGTCTGTaGCTCTGGATCCACATTGGTCTTGGTCCATGTGGC +
Preference number: 3 (lower is better)
Translates to: CRPLGRLLALGL*LWIHIGLGPCG
Trigger: GCCACATGGACCAAGACCAATGTGGATCCAGAGGCACAGACCTAGAGCCAGGAGCCTTCCTAGGGGACGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GTGTGCCCCAAGGGGTGGCTTGGGCACATTTCCCATTaGCCTCAGGCCACACTCAGACAATGCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: VCPKGWLGHISH*PQATLRQCFSS
Trigger: GGAGGAGAAGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATGTGCCCAAGCCACCCCTTGGGGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GTCATGGCCCTGCCCAGCGGGGCCAACTTCCCAGTCTaGCACTCATACTTGAAACTGCTACCCAGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: VMALPSGANFPV*HSYLKLLPRLG
Trigger: TCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGGGCAGGGCCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGGAAGGGGGCAAGCTCTTGGGGAGCCGTGAGGAAATaGGCCTCCACAGACAAGATCAGGCAGGGCTTATGC +
Preference number: 3 (lower is better)
Translates to: WKGASSWGAVRK*ASTDKIRQGLC
Trigger: GCATAAGCCCTGCCTGATCTTGTCTGTGGAGGCCCATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GGACTGGTGGCTGGCTCAGTCCGCTCAGCTATATCTTaGAGGGCGGGGTGTGTGTGTACCAATCCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GLVAGSVRSAIS*RAGCVCTNPGC
Trigger: ACAGCCAGGATTGGTACACACACACCCCGCCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TCCTTAGTGACAATAGTGGGGCCCAGGACTGGTGGCTaGCTCAGTCCGCTCAGCTATATCTTGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: SLVTIVGPRTGG*LSPLSYILEGG
Trigger: CCCGCCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCTGGGCCCCACTATTGTCACTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCCATCCCCCTCCCTCCCTGGAGCGAGGGAAGGGGATaGTGTGTGCTGCCTCAGCTTATAGGATATCAAGTG +
Preference number: 3 (lower is better)
Translates to: PIPLPPWSEGRG*CVLPQLIGYQV
Trigger: CACTTGATATCCTATAAGCTGAGGCAGCACACACCATCCCCTTCCCTCGCTCCAGGGAGGGAGGGGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGTCACCATATACTCACTaGCTCTGGGTGCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRSPYTH*LWVLLA
Trigger: AGCCAGGAGCACCCAGAGCAAGTGAGTATATGGTGA...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACATGCAGCCTCAAAGACTaGGAGACTTGGCATGCAGCC +
Preference number: 3 (lower is better)
Translates to: EREHGGKGSHCTVSAGATCSLKD*ETWHAA
Trigger: GGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCA...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGGTGCCTCAGTTCCTGGATTGAGACCTCTTTCGCCTaGGAGGTTCTTTCCCCAGGCCAGCTGAGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RCLSSWIETSFA*EVLSPGQLREA
Trigger: AGCCTCCCTCAGCTGGCCTGGGGAAAGAACCTCTCAGGCGAAAGAGGTCTCAATCCAGGAACTGAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp ACTGCAACAGAAAACGCGCAGCTTGGCCTGATCAGATaGGCAGTTGAGGTCTGGCCCCTCCCTCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: TATENAQLGLIR*AVEVWPLPLCL
Trigger: GAGGCAGAGAGGGAGGGGCCAGACCTCAACTGCTCATCTGATCAGGCCAAGCTGCGCGTTTTCTGTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp AGAGCCATGGTGGCTTGTGACACCCTGGAGCATTCTTaGCTTGCATGCATCTCCAGTGGCCCATGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: RAMVACDTLEHS*LACISSGPWAP
Trigger: TGGAGCCCATGGGCCACTGGAGATGCATGCAAGGCAAGAATGCTCCAGGGTGTCACAAGCCACCATGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GGTGGGCTCCTCTGCCAGCTTGACCTCCATAGCTTTTaGTGTGACCATGGAAGATACTCCCAAGGTCCCGCC +
Preference number: 3 (lower is better)
Translates to: GGLLCQLDLHSF*CDHGRYSQGPA
Trigger: GGCGGGACCTTGGGAGTATCTTCCATGGTCACAGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TGGGGCTGTAGGGCCTCCCGAGAATTCCAGAAGACCTaGCTCTGGCTGTTAGCAAGAGCCTACTCTTGGGGA +
Preference number: 3 (lower is better)
Translates to: WGCRASREFQKT*LWLLARAYSWG
Trigger: TCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTTCTGGAATTCTCGGGAGGCCCTACAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TTCAGGGCCATGGGAGAAACCAAAAGCCTGTCCTGCTaGCCTCAACTCTCTGGGAGCCAGCATTCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: FRAMGETKSLSC*PQLSGSQHSPP
Trigger: TGGGGGAGAATGCTGGCTCCCAGAGAGTTGAGGGCAGCAGGACAGGCTTTTGGTTTCTCCCATGGCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GCAGGAGGCAGGAGCCACAAAGAAAGAGTGCTCGCATaGCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCC +
Preference number: 3 (lower is better)
Translates to: AGGRSHKERVLA*LPRFWLRGICP
Trigger: GGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGAGCACTCTTTCTTTGTGGCTCCTGCCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TCTTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTaGCCACACTGCCAGTGGTGTATGCAAGAGATGCTG +
Preference number: 3 (lower is better)
Translates to: SSPGMCAPGGQL*PHCQWCMQEML
Trigger: CAGCATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCACTTGGCTCCTCTGTCTGGTCCTGGCTAGAGCCATaGTGGCTTGTGACACCCTGGAGCATTCTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: PLGSSVWSWLEP*WLVTPWSILAL
Trigger: CAAGGCAAGAATGCTCCAGGGTGTCACAAGCCACCATGGCTCTAGCCAGGACCAGACAGAGGAGCCAAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTCGCAGCAGTCAGAAGCCAGCAGCCAGGAGGGGTTaGAAGAGAATGTACGGGCCAGGAGATCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: CRSSQKPAARRG*KRMYGPGDQKW
Trigger: CCACTTCTGATCTCCTGGCCCGTACATTCTCTTCCAACCCCTCCTGGCTGCTGGCTTCTGACTGCTGCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCCCTAGGAAGGCTCCTGGCTCTAGGTCTGTGCCTCTaGATCCACATTGGTCTTGGTCCATGTGGCACTGGT +
Preference number: 3 (lower is better)
Translates to: PLGRLLALGLCL*IHIGLGPCGTG
Trigger: ACCAGTGCCACATGGACCAAGACCAATGTGGATCCAGAGGCACAGACCTAGAGCCAGGAGCCTTCCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CATCCTCCTTGCCTCCAGCCCACAGAGCATCACAGATaGCCTCTAGCTAGGAAGAACCCCTCGTGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: HPPCLQPTEHHR*PLARKNPSCSS
Trigger: ACTGCTGCACGAGGGGTTCTTCCTAGCTAGAGGCCATCTGTGATGCTCTGTGGGCTGGAGGCAAGGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGAAGGGGGCAAGCTCTaGGGGAGCCGTGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLEGGKL*GSREEM
Trigger: CATTTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTC...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGAAAACGCGCAGCTTGGCCTGATCAGATGAGCAGTTaGGGTCTGGCCCCTCCCTCTCTGCCTCACATTCTC +
Preference number: 3 (lower is better)
Translates to: RKRAAWPDQMSS*GLAPPSLPHIL
Trigger: GAGAATGTGAGGCAGAGAGGGAGGGGCCAGACCTCAACTGCTCATCTGATCAGGCCAAGCTGCGCGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CTGAAGAAGAGACCCAGCCAAGGCTCCTGTGTGGTCTaGTTCAGAACAGTCCTGTGCCCAGAGAAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: LKKRPSQGSCVV*FRTVLCPEKAV
Trigger: CACTGCCTTCTCTGGGCACAGGACTGTTCTGAAGCAGACCACACAGGAGCCTTGGCTGGGTCTCTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CCCAGGGAAGTCCCTGGGAAGGCACCCTCATTGCTGTaGCTGCCTGCTGGAAGCATGAGAGCATTGAATGTA +
Preference number: 3 (lower is better)
Translates to: PREVPGKAPSLL*LPAGSMRALNV
Trigger: TACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGCCTTCCCAGGGACTTCCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GCGTATGGGGCTCCTGTAACATGGGAGAGGCAGCCATaGTTTCTGCCATGCACCATTGCCCCTTCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: AYGAPVTWERQP*FLPCTIAPSLL
Trigger: AAGCAAGGAAGGGGCAATGGTGCATGGCAGAAAGCATGGCTGCCTCTCCCATGTTACAGGAGCCCCATACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCTGACCAAGACCTGACCAGCTCTTTGCTGTGCCCATaGTATGAACAGCTCAACTGTCATGGCCCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: PDQDLTSSLLCP*YEQLNCHGPAQ
Trigger: CTGGGCAGGGCCATGACAGTTGAGCTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GGTTGGAAGAGAATGTACGGGCCAGGAGATCAGAAGTaGGGCTGTAGGGCCTCCCGAGAATTCCAGAAGACC +
Preference number: 3 (lower is better)
Translates to: GWKRMYGPGDQK*GCRASREFQKT
Trigger: GGTCTTCTGGAATTCTCGGGAGGCCCTACAGCCCCACTTCTGATCTCCTGGCCCGTACATTCTCTTCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GGTGTCAGTCAACAGGGCCACTCTTTCCCATCACCCTaGAGCAGGGACACCACACCTAGACTCAGGAATGCA +
Preference number: 3 (lower is better)
Translates to: GVSQQGHSFPSP*SRDTTPRLRNA
Trigger: TGCATTCCTGAGTCTAGGTGTGGTGTCCCTGCTCCAGGGTGATGGGAAAGAGTGGCCCTGTTGACTGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GGGCACCTGAGGTGCAGCCTCAAAGACTTGGAGACTTaGCATGCAGCCTCCAGCTCTCCCTTGCTGAAAGTT +
Preference number: 3 (lower is better)
Translates to: GHLRCSLKDLET*HAASSSPLLKV
Trigger: AACTTTCAGCAAGGGAGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCAGGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ACCTACCCTAAGTCCCCTTGTCAAGGTCCTCCACTGTaGCAAAGGACACACAGGACCTGGGGCTGTCATGTG +
Preference number: 3 (lower is better)
Translates to: TYPKSPCQGPPL*QRTHRTWGCHV
Trigger: CACATGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGGGACTTAGGGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TTCAGCTCCTTGTGGTTATGGGCGTGCGTGACATCCTaGCTTCTTTGCTGGCTGGAGCTGTGCTGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: FSSLWLWACVTS*LLCWLELCCPP
Trigger: AGGAGGACAGCACAGCTCCAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCCCAGGAGTGGACTGTCCCAGGATGGCACAGCCCATaGAAGCATTTGGAAGCATTCTGGGGCTGTGTTCTA +
Preference number: 3 (lower is better)
Translates to: PQEWTVPGWHSP*KHLEAFWGCVL
Trigger: TAGAACACAGCCCCAGAATGCTTCCAAATGCTTCCATGGGCTGTGCCATCCTGGGACAGTCCACTCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGCAAATTAGTGAGCCATCAGCTTAAGTGGGCACGGTaGGAAAGGGAGCACGGTGGGAAAGGGAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: CKLVSHQLKWAR*EREHGGKGSHC
Trigger: GCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTCCCACCGTGCCCACTTAAGCTGATGGCTCACTAATTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCAGCAAGAGCCTACTCTaGGGGAAAGCCAGCAACCCC +
Preference number: 3 (lower is better)
Translates to: LGHMLQMWASSNSCPQETSKSLL*GKASNP
Trigger: GGGGTTGCTGGCTTTCCCCAAGAGTAGGCTCTTGCT...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCACCTACCACATCCTCCTaGCCTCCAGCCCACAGAGCA +
Preference number: 3 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPAPTTSS*PPAHRA
Trigger: TGCTCTGTGGGCTGGAGGCAAGGAGGATGTGGTAGG...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp CCAGCGGGGCCAACTTCCCAGTCTGGCACTCATACTTaGAACTGCTACCCAGGCTTGGAGTTACCCATAAGC +
Preference number: 3 (lower is better)
Translates to: PAGPTSQSGTHT*NCYPGLELPIS
Trigger: GCTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp ATCCCTGGGACTTGGAGAGTCCTAGAACTTACCTGCTaGGGGTGGCTGGGAGACTTGAGTGAACTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: IPGTWRVLELTC*GWLGDLSELFP
Trigger: GGGGAAGAGTTCACTCAAGTCTCCCAGCCACCCTCAGCAGGTAAGTTCTAGGACTCTCCAAGTCCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CCAGTTGACTTGGGGCTCAGTCATGGTGGGCTCCTCTaGCAGCTTGACCTCCATAGCTTTTGCTGTGACCAT +
Preference number: 3 (lower is better)
Translates to: PVDLGLSHGGLL*QLDLHSFCCDH
Trigger: ATGGTCACAGCAAAAGCTATGGAGGTCAAGCTGGCAGAGGAGCCCACCATGACTGAGCCCCAAGTCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CTCCACAGACAAGATCAGGCAGGGCTTATGCCCACCTaGCCTGCTTCAAGCTGCCTCCCTTCCTGTATTGAA +
Preference number: 3 (lower is better)
Translates to: LHRQDQAGLMPT*PASSCLPSCIE
Trigger: TTCAATACAGGAAGGGAGGCAGCTTGAAGCAGGGCAGGTGGGCATAAGCCCTGCCTGATCTTGTCTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GGGCTGACAGAAAGGCAGCCGACAATGCCCAGGCCGTaGTACCTGATATCATCAGAAAGGCAACAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLTERQPTMPRP*YLISSERQQSR
Trigger: CCTGCTTTGTTGCCTTTCTGATGATATCAGGTAGCACGGCCTGGGCATTGTCGGCTGCCTTTCTGTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CTCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTaGCCCTTCTCAGAGCGCCCCAACAACCTGAATCTT +
Preference number: 3 (lower is better)
Translates to: LACLPRFWLRGI*PFSERPNNLNL
Trigger: AAGATTCAGGTTGTTGGGGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GATTTCCTCACAGTTGCAGTTACTGGGACACACAGGTaGGAGGTCCCAGGTGTCAGTCAACAGGGCCACTCT +
Preference number: 3 (lower is better)
Translates to: DFLTVAVTGTHR*EVPGVSQQGHS
Trigger: AGAGTGGCCCTGTTGACTGACACCTGGGACCTCCCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp AGTCTAGACTCAGCTGAGTGTCCCAGGAACGGGCGCTaGCTGACCTGGAAAATTACCCAGGCACCAACAAAG +
Preference number: 3 (lower is better)
Translates to: SLDSAECPRNGR*LTWKITQAPTK
Trigger: CTTTGTTGGTGCCTGGGTAATTTTCCAGGTCAGCCAGCGCCCGTTCCTGGGACACTCAGCTGAGTCTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GATGATACCCTTACCACCACCCACAAGCTCCATCCCTaGCCACAGAGAATGTGCAATCTTCACAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: DDTLTTTHKLHP*PQRMCNLHSCP
Trigger: GGGGCAGCTGTGAAGATTGCACATTCTCTGTGGCCAGGGATGGAGCTTGTGGGTGGTGGTAAGGGTATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CAAGGTCCTCCACTGTGGCAAAGGACACACAGGACCTaGGGCTGTCATGTGGGCATCTTTGAGAACCACTCT +
Preference number: 3 (lower is better)
Translates to: QGPPLWQRTHRT*GCHVGIFENHS
Trigger: AGAGTGGTTCTCAAAGATGCCCACATGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTaGGCATCTTTCTGTCCACTTCTGAGGGGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: VLIFRSATETQS*ASFCPLLRGPV
Trigger: CACAGGGCCCCTCAGAAGTGGACAGAAAGATGCCCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGGTTATaGGCGTGCGTGACATCCTGGCTTCTTTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: TQALASFSSLWL*ACVTSWLLCWL
Trigger: CAGCCAGCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GACACACAGGACCTGGGGCTGTCATGTGGGCATCTTTaGGAACCACTCTTCTGTCCCTCATCTGATCAGCCA +
Preference number: 3 (lower is better)
Translates to: DTQDLGLSCGHL*EPLFCPSSDQP
Trigger: TGGCTGATCAGATGAGGGACAGAAGAGTGGTTCTCAAAGATGCCCACATGACAGCCCCAGGTCCTGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TACTGCCCTGACCAAGACCTGACCAGCTCTTTGCTGTaGCCATGGTATGAACAGCTCAACTGTCATGGCCCT +
Preference number: 3 (lower is better)
Translates to: YCPDQDLTSSLL*PWYEQLNCHGP
Trigger: AGGGCCATGACAGTTGAGCTGTTCATACCATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp AGTCCCTGGGAAGGCACCCTCATTGCTGTGCCTGCCTaGTGGAAGCATGAGAGCATTGAATGTAAGAGCTGT +
Preference number: 3 (lower is better)
Translates to: SPWEGTLIAVPA*WKHESIECKSC
Trigger: ACAGCTCTTACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGCCTTCCCAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp ATGGGAGAGGCAGCCATGCTTTCTGCCATGCACCATTaGCCCTTCCTTGCTTTCTATGCACTCCTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: MGEAAMLSAMHH*PFLAFYALLEN
Trigger: GTTCTCCAGGAGTGCATAGAAAGCAAGGAAGGGGCAATGGTGCATGGCAGAAAGCATGGCTGCCTCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CCTGTAACATGGGAGAGGCAGCCATGCTTTCTGCCATaGACCATTGCCCCTTCCTTGCTTTCTATGCACTCC +
Preference number: 3 (lower is better)
Translates to: PVTWERQPCFLP*TIAPSLLSMHS
Trigger: GGAGTGCATAGAAAGCAAGGAAGGGGCAATGGTGCATGGCAGAAAGCATGGCTGCCTCTCCCATGTTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTACCCTAACGGGATTTCCTCACAGTTGCAGTTACTaGGACACACAGGTGGGAGGTCCCAGGTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: CTLTGFPHSCSY*DTQVGGPRCQS
Trigger: TGACTGACACCTGGGACCTCCCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp AGCCCTCAGCCAAAGTCACCATATACTCACTTGCTCTaGGTGCTCCTGGCTGAGCTGACTGCAAGACAGACA +
Preference number: 3 (lower is better)
Translates to: SPQPKSPYTHLL*VLLAELTARQT
Trigger: TGTCTGTCTTGCAGTCAGCTCAGCCAGGAGCACCCAGAGCAAGTGAGTATATGGTGACTTTGGCTGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTGGCAAAGGACACACAGGACCTGGGGCTGTCATGTaGGCATCTTTGAGAACCACTCTTCTGTCCCTCATC +
Preference number: 3 (lower is better)
Translates to: CGKGHTGPGAVM*ASLRTTLLSLI
Trigger: GATGAGGGACAGAAGAGTGGTTCTCAAAGATGCCCACATGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ACACGCATGCGTGATTGCAGTGTTATCGACCTAGGCTaGCTCTGCTCAGCGTCATATAGGTCAGATCCAGGG +
Preference number: 3 (lower is better)
Translates to: TRMRDCSVIDLG*LCSASYRSDPG
Trigger: CCCTGGATCTGACCTATATGACGCTGAGCAGAGCCAGCCTAGGTCGATAACACTGCAATCACGCATGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GGATGGCACAGCCCATGGAAGCATTTGGAAGCATTCTaGGGCTGTGTTCTATTCTATGGTGTCAGGCACGGG +
Preference number: 3 (lower is better)
Translates to: GWHSPWKHLEAF*GCVLFYGVRHG
Trigger: CCCGTGCCTGACACCATAGAATAGAACACAGCCCCAGAATGCTTCCAAATGCTTCCATGGGCTGTGCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TTATTCCTTAGTGACAATAGTGGGGCCCAGGACTGGTaGCTGGCTCAGTCCGCTCAGCTATATCTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LFLSDNSGAQDW*LAQSAQLYLGG
Trigger: CCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCTGGGCCCCACTATTGTCACTAAGGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CAGAACCAAACAGCACTTGGCCACATGCTCCAAATGTaGGCTTCAAGCAACTCTTGCCCACAAGAGACCCGC +
Preference number: 3 (lower is better)
Translates to: QNQTALGHMLQM*ASSNSCPQETR
Trigger: GCGGGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAGTGCTGTTTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCCTGGGAAGGCACCCTCATTGCTGTGCCTGCCTGCTaGAAGCATGAGAGCATTGAATGTAAGAGCTGTAAC +
Preference number: 3 (lower is better)
Translates to: PWEGTLIAVPAC*KHESIECKSCN
Trigger: GTTACAGCTCTTACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGAGGGTGCCTTCCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp ATATCCATCCAAAAGTGCCCTCTGAATTCTTGGAGGTaGGGCAGACTCTGCAGGGTGTCGACACCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: ISIQKCPLNSWR*GRLCRVSTPAL
Trigger: CAAGGCAGGTGTCGACACCCTGCAGAGTCTGCCTCACCTCCAAGAATTCAGAGGGCACTTTTGGATGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GTTCTTTCCCCAGGCCAGCTGAGGGAGGCTCAATTTTaGCTTCTGAACTCTGAGTCCAAGGACATCTCCAAG +
Preference number: 3 (lower is better)
Translates to: VLSPGQLREAQF*LLNSESKDISK
Trigger: CTTGGAGATGTCCTTGGACTCAGAGTTCAGAAGGCAAAATTGAGCCTCCCTCAGCTGGCCTGGGGAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GGACACCCACCCGGCATGTGGAGTTACCACCTACTCTaGACAATAGTCAACATACACCCAAACTCTCAGTCC +
Preference number: 3 (lower is better)
Translates to: GHPPGMWSYHLL*TIVNIHPNSQS
Trigger: GGACTGAGAGTTTGGGTGTATGTTGACTATTGTGCAGAGTAGGTGGTAACTCCACATGCCGGGTGGGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTaGTTATGGGCGTGCGTGACATCCTGGCTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: LYTQALASFSSL*LWACVTSWLLC
Trigger: GCAAAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ATCACCAAACCCCAAGGTACATTATGGCTGCACGTGTaGTTCCTGACCTCACAGGAAGTAGGCGGGTTTGGA +
Preference number: 3 (lower is better)
Translates to: ITKPQGTLWLHV*FLTSQEVGGFG
Trigger: TCCAAACCCGCCTACTTCCTGTGAGGTCAGGAACCACACGTGCAGCCATAATGTACCTTGGGGTTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCTTTATTCCTTAGTGACAATAGTGGGGCCCAGGACTaGTGGCTGGCTCAGTCCGCTCAGCTATATCTTGGA +
Preference number: 3 (lower is better)
Translates to: PLFLSDNSGAQD*WLAQSAQLYLG
Trigger: TCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCTGGGCCCCACTATTGTCACTAAGGAATAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCTCGGGGGTGCCCTTTTCCCACCAGATGTGCCACCTaGAATATGCCACAAGTACCTTTCAATGTTGCAACA +
Preference number: 3 (lower is better)
Translates to: PRGCPFPTRCAT*NMPQVPFNVAT
Trigger: TGTTGCAACATTGAAAGGTACTTGTGGCATATTCCAGGTGGCACATCTGGTGGGAAAAGGGCACCCCCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TTCCATTTGTGCAAATTAGTGAGCCATCAGCTTAAGTaGGCACGGTGGGAAAGGGAGCACGGTGGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: FHLCKLVSHQLK*ARWEREHGGKG
Trigger: CCCTTTCCCACCGTGCTCCCTTTCCCACCGTGCCCACTTAAGCTGATGGCTCACTAATTTGCACAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTCACCCTGGAGCATTCTaGCCTTGCATGCATCTCCAG +
Preference number: 3 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSHPGAF*PCMHLQ
Trigger: CTGGAGATGCATGCAAGGCAAGAATGCTCCAGGGTG...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTCCACCCATAAGCCAGTaGACTTGGGGCTCAGTCATG +
Preference number: 3 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSPPISQ*TWGSVM
Trigger: CATGACTGAGCCCCAAGTCAACTGGCTTATGGGTGG...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACAGGAAGCATGAGAGCATaGAATGTAAGAGCTGTAACT +
Preference number: 3 (lower is better)
Translates to: EREHGGKGSHCTVSAGATGSMRA*NVRAVT
Trigger: AGTTACAGCTCTTACATTCAATGCTCTCATGCTTCC...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCGGTACAGGAGTTGCTTaGGGTCAAACAGCATCCATT +
Preference number: 3 (lower is better)
Translates to: LGHMLQMWASSNSCPQETGTGVA*GQTASI
Trigger: AATGGATGCTGTTTGACCCAAAGCAACTCCTGTACC...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGGACCAGGCCACCCCAGGTCATCCAACTCTATATGTaGGATGACACTCTCCAGAATTCTCCTACCAGTGAG +
Preference number: 3 (lower is better)
Translates to: RTRPPQVIQLYM*DDTLQNSPTSE
Trigger: CTCACTGGTAGGAGAATTCTGGAGAGTGTCATCTCACATATAGAGTTGGATGACCTGGGGTGGCCTGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CAAAAGCCAGGCTTCATCCCGCTATTTCCAGCCAGTTaGTTCCTACCAACTCCTCCAGAATCCTGTACCCTA +
Preference number: 3 (lower is better)
Translates to: QKPGFIPLFPAS*FLPTPPESCTL
Trigger: TAGGGTACAGGATTCTGGAGGAGTTGGTAGGAAGCAACTGGCTGGAAATAGCGGGATGAAGCCTGGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ATTGCTTCTATGACAGAAGGGGTCCGGAAGCCCTGGTaGCTTTGGAGTCTGAGAAACAACTGGATTGCTGTG +
Preference number: 3 (lower is better)
Translates to: IASMTEGVRKPW*LWSLRNNWIAV
Trigger: CACAGCAATCCAGTTGTTTCTCAGACTCCAAAGCCACCAGGGCTTCCGGACCCCTTCTGTCATAGAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CCTCCTCAGAGTTTGGATGGACACCCACCCGGCATGTaGAGTTACCACCTACTCTGCACAATAGTCAACATA +
Preference number: 3 (lower is better)
Translates to: PPQSLDGHPPGM*SYHLLCTIVNI
Trigger: TATGTTGACTATTGTGCAGAGTAGGTGGTAACTCCACATGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTaGGCAGTGTGGCTTGGGCTCTACAGGAATGTCATA +
Preference number: 3 (lower is better)
Translates to: IECKSCNWSQAG*AVWLGLYRNVI
Trigger: TATGACATTCCTGTAGAGCCCAAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTGGGATTTCCTCACAGTaGCAGTTACTGGGACACACA +
Preference number: 3 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSGISSQ*QLLGHT
Trigger: TGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCC...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GTAAGAGGTGTCTTTTCAATTCTTCCCATACTGCCCTaGCCAAGACCTGACCAGCTCTTTGCTGTGCCCATG +
Preference number: 3 (lower is better)
Translates to: VRGVFSILPILP*PRPDQLFAVPM
Trigger: CATGGGCACAGCAAAGAGCTGGTCAGGTCTTGGTCAGGGCAGTATGGGAAGAATTGAAAAGACACCTCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AAACAAGGGTTCCCATATCCATCCAAAAGTGCCCTCTaGATTCTTGGAGGTGAGGCAGACTCTGCAGGGTGT +
Preference number: 3 (lower is better)
Translates to: KQGFPYPSKSAL*ILGGEADSAGC
Trigger: ACACCCTGCAGAGTCTGCCTCACCTCCAAGAATTCAGAGGGCACTTTTGGATGGATATGGGAACCCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GCCAAGAAATACAGAACCAAACAGCACTTGGCCACATaGTCCAAATGTGGGCTTCAAGCAACTCTTGCCCAC +
Preference number: 3 (lower is better)
Translates to: AKKYRTKQHLAT*SKCGLQATLAH
Trigger: GTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAGTGCTGTTTGGTTCTGTATTTCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp ACTGACAGAAGTTCTGCACAGGCTGTAAAAGATCCCTaGGACTTGGAGAGTCCTAGAACTTACCTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: TDRSSAQAVKDP*DLESPRTYLLR
Trigger: CCTCAGCAGGTAAGTTCTAGGACTCTCCAAGTCCCAGGGATCTTTTACAGCCTGTGCAGAACTTCTGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GTACAAGAGTCCTTCAGCTCACGTGTAAATACAATGTaGGCTCTCTGGAAGCCGCTCATATCTGCCAGCCAA +
Preference number: 3 (lower is better)
Translates to: VQESFSSRVNTM*ALWKPLISASQ
Trigger: TTGGCTGGCAGATATGAGCGGCTTCCAGAGAGCTCACATTGTATTTACACGTGAGCTGAAGGACTCTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CTTACAGATTTCACCTGGCTTAGCAGAGACCTTAACTaGAACAGAAAACGCGCAGCTTGGCCTGATCAGATG +
Preference number: 3 (lower is better)
Translates to: LTDFTWLSRDLN*NRKRAAWPDQM
Trigger: CATCTGATCAGGCCAAGCTGCGCGTTTTCTGTTGCAGTTAAGGTCTCTGCTAAGCCAGGTGAAATCTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp AGTGTATCGTGTGGGATAAAATGCCCCCTTTGTCCATaGACCCTCTATCCCACTAAGGGACTCAAAGCTTTC +
Preference number: 3 (lower is better)
Translates to: SVSCGIKCPLCP*TLYPTKGLKAF
Trigger: GAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATTTTATCCCACACGATACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CAGACACATCTGGTAAGTGTATCGTGTGGGATAAAATaGCCCCTTTGTCCATGCACCCTCTATCCCACTAAG +
Preference number: 3 (lower is better)
Translates to: QTHLVSVSCGIK*PLCPCTLYPTK
Trigger: CTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATTTTATCCCACACGATACACTTACCAGATGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp TGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTaGCATCGGCAGGAACCAGTGCCTGGAAAGCGTATG +
Preference number: 3 (lower is better)
Translates to: CLETNTSEVDVV*HRQEPVPGKRM
Trigger: CATACGCTTTCCAGGCACTGGTTCCTGCCGATGCCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCAGCATAAACGAAGGCTaGATTCTTGTTAGACTTACA +
Preference number: 3 (lower is better)
Translates to: LGHMLQMWASSNSCPQETSINEG*ILVRLT
Trigger: TGTAAGTCTAACAAGAATCAAGCCTTCGTTTATGCT...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTTGTATTTCAAAACCTTaGAGACTATCAAGGGCACTA +
Preference number: 3 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLCISKP*RLSRAL
Trigger: TAGTGCCCTTGATAGTCTCAAAGGTTTTGAAATACA...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp TGTCTCTACAGTATTAGGTTATGGTTATTGCTTCTATaGCAGAAGGGGTCCGGAAGCCCTGGTGGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: CLYSIRLWLLLL*QKGSGSPGGFG
Trigger: TCCAAAGCCACCAGGGCTTCCGGACCCCTTCTGTCATAGAAGCAATAACCATAACCTAATACTGTAGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp AGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATaGCTGCACGTGTGGTTCCTGACCTCACAGGAAGTA +
Preference number: 3 (lower is better)
Translates to: RRLFITKPQGTL*LHVWFLTSQEV
Trigger: TACTTCCTGTGAGGTCAGGAACCACACGTGCAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GAGGAATCTGCCCCTTCTCAGAGCGCCCCAACAACCTaGATCTTTCTTATAAGTGCAATCTTAAGATGGTCT +
Preference number: 3 (lower is better)
Translates to: EESAPSQSAPTT*IFLISAILRWS
Trigger: AGACCATCTTAAGATTGCACTTATAAGAAAGATTCAGGTTGTTGGGGCGCTCTGAGAAGGGGCAGATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGCAAATGGCTGGAAATGTTTGGAAACCAATACATCTaGAGTGGATGTAGTCTGGCATCGGCAGGAACCAGT +
Preference number: 3 (lower is better)
Translates to: SKWLEMFGNQYI*SGCSLASAGTS
Trigger: ACTGGTTCCTGCCGATGCCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TCAGAGCGCCCCAACAACCTGAATCTTTCTTATAAGTaGAATCTTAAGATGGTCTTCAGGGCCATGGGAGAA +
Preference number: 3 (lower is better)
Translates to: SERPNNLNLSYK*NLKMVFRAMGE
Trigger: TTCTCCCATGGCCCTGAAGACCATCTTAAGATTGCACTTATAAGAAAGATTCAGGTTGTTGGGGCGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TGCCACCTGGAATATGCCACAAGTACCTTTCAATGTTaGAACACTGAAACAAACCATCACGACCCTCAGTCA +
Preference number: 3 (lower is better)
Translates to: CHLEYATSTFQC*NTETNHHDPQS
Trigger: TGACTGAGGGTCGTGATGGTTTGTTTCAGTGTTGCAACATTGAAAGGTACTTGTGGCATATTCCAGGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CAAGACAAGAGAGACAGGAGCAACAGGGTCTCTTTATaGACCCAGACCAGAATGATGCTATTATATCGGTCT +
Preference number: 3 (lower is better)
Translates to: QDKRDRSNRVSL*TQTRMMLLYRS
Trigger: AGACCGATATAATAGCATCATTCTGGTCTGGGTGCATAAAGAGACCCTGTTGCTCCTGTCTCTCTTGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp TCCCTCTCTGCCTCACATTCTCAGGACAATGTGTATTaGGTATTAGCAAACCACTTCCTTCCCATGAACAAG +
Preference number: 3 (lower is better)
Translates to: SLSASHSQDNVY*VLANHFLPMNK
Trigger: CTTGTTCATGGGAAGGAAGTGGTTTGCTAATACTCAATACACATTGTCCTGAGAATGTGAGGCAGAGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp GACTTGGGAACAAGCCCAAGCCCATCCATTCTTTTGTaGATGCTACATAACGTCAAATTCAAACTAAGGTGC +
Preference number: 3 (lower is better)
Translates to: DLGTSPSPSILL*MLHNVKFKLRC
Trigger: GCACCTTAGTTTGAATTTGACGTTATGTAGCATGCACAAAAGAATGGATGGGCTTGGGCTTGTTCCCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp GTCCTTTATAGCAATCTCACATGCACAGGTAGTTTCTaGAATAGCAATCTGCTTGGGCCAGACTTGTCTCTA +
Preference number: 3 (lower is better)
Translates to: VLYSNLTCTGSF*NSNLLGPDLSL
Trigger: TAGAGACAAGTCTGGCCCAAGCAGATTGCTATTCCAGAAACTACCTGTGCATGTGAGATTGCTATAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp AGTGGGTACCAGGCTTTTCCTCATTTTTGGTACAAGTaGTCAAGCACCTGTAACTGGTGCACTATTTACAGA +
Preference number: 3 (lower is better)
Translates to: SGYQAFPHFWYK*SSTCNWCTIYR
Trigger: TCTGTAAATAGTGCACCAGTTACAGGTGCTTGATCACTTGTACCAAAAATGAGGAAAAGCCTGGTACCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GGAGCAACAGGGTCTCTTTATGCACCCAGACCAGAATaGTGCTATTATATCGGTCTTTTTGCAAAAGAGACT +
Preference number: 3 (lower is better)
Translates to: GATGSLYAPRPE*CYYIGLFAKET
Trigger: AGTCTCTTTTGCAAAAAGACCGATATAATAGCATCATTCTGGTCTGGGTGCATAAAGAGACCCTGTTGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTaGTCACAAGGAATAAACAAGGGTTCCCATATCCAT +
Preference number: 3 (lower is better)
Translates to: QSDRSHLLLLDL*SQGINKGSHIH
Trigger: ATGGATATGGGAACCCTTGTTTATTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTCTGTATACTCAGGCTTaGGCCAGTTTCAGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: ASKTHIISKLPSLLFINFLYTQA*ASFSSL
Trigger: CAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAG...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp TCAAACAGCATCCATTTCAACCACATTCATCGTGTCTaGTGTGAACATATCAACACGTTTTCTCTCTGGTGT +
Preference number: 3 (lower is better)
Translates to: SNSIHFNHIHRV*CEHINTFSLWC
Trigger: ACACCAGAGAGAAAACGTGTTGATATGTTCACAGCAGACACGATGAATGTGGTTGAAATGGATGCTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp CAAACTAAGGTGCACACAGTAAGGAATTTCAAGGCATaGAATTCCGTAGTGCAAATGGCTTGCATATACTCA +
Preference number: 3 (lower is better)
Translates to: QTKVHTVRNFKA*NSVVQMACIYS
Trigger: TGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTGAAATTCCTTACTGTGTGCACCTTAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp AGAATGTGGCACTTGAAGTTGGATCTGAAGCATTTATaGAATGAACCACAGAGTGACAGATCTCATCTCCTA +
Preference number: 3 (lower is better)
Translates to: RMWHLKLDLKHL*NEPQSDRSHLL
Trigger: TAGGAGATGAGATCTGTCACTCTGTGGTTCATTCCATAAATGCTTCAGATCCAACTTCAAGTGCCACATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR-3UTR CAA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAAGGCCTGCAAATGTTCTaGCAGGCAATCCTACAAGTT +
Preference number: 3 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKGLQMF*QAILQV
Trigger: AACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCC...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GGGGTCAGGATTACAAACCAACTCTCATATTCCCTATaGAAATTGTGTGTGTGTACATGTGTATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: GVRITNQLSYSL*KLCVCTCVCVQ
Trigger: TTGCACACATACACATGTACACACACACAATTTTCATAGGGAATATGAGAGTTGGTTTGTAATCCTGACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp CCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATaGAGTCTAAGAGATTTCTGGAGTCAGTCTCAGATA +
Preference number: 3 (lower is better)
Translates to: PANVLAGNPTSL*SLRDFWSQSQI
Trigger: TATCTGAGACTGACTCCAGAAATCTCTTAGACTTCATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CCA 72 bp CGTGTCTGCTGTGAACATATCAACACGTTTTCTCTCTaGTGTCAAAGAGCTCGGAATGATTTATGTATAAGA +
Preference number: 3 (lower is better)
Translates to: RVCCEHINTFSL*CQRARNDLCIR
Trigger: TCTTATACATAAATCATTCCGAGCTCTTTGACACCAGAGAGAAAACGTGTTGATATGTTCACAGCAGACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp AATTTCAAGGCATGCAATTCCGTAGTGCAAATGGCTTaGATATACTCAATTTTAACAGGGATGAAGGCAACA +
Preference number: 3 (lower is better)
Translates to: NFKACNSVVQMA*IYSILTGMKAT
Trigger: TGTTGCCTTCATCCCTGTTAAAATTGAGTATATGCAAGCCATTTGCACTACGGAATTGCATGCCTTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR TCA 72 bp GTGCTCTACAGAGTTGACATAAAAATAGACCCGTATTaGTTATACAAATCTATTGTGAGAGGTTACCCAGTG +
Preference number: 3 (lower is better)
Translates to: VLYRVDIKIDPY*LYKSIVRGYPV
Trigger: CACTGGGTAACCTCTCACAATAGATTTGTATAATCAATACGGGTCTATTTTTATGTCAACTCTGTAGAGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR GCA 72 bp ATAGTTGTAAATAGAAATGAGCTATTGGTTCAAGCCTaGTATAGAAACATTCAAAGCCAATCACAGCTAGAG +
Preference number: 3 (lower is better)
Translates to: IVVNRNELLVQA*YRNIQSQSQLE
Trigger: CTCTAGCTGTGATTGGCTTTGAATGTTTCTATAGCAGGCTTGAACCAATAGCTCATTTCTATTTACAACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTTGGCTAGTGGGAGGGTaGCCACCAGGCAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: FTAAPPGPRAPEVQPQRLWLVGG*PPGSRA
Trigger: TGCTCTGCTGCCTGGTGGGCACCCTCCCACTAGCCA...AAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CCCTTGTCAAGGTCCTCCACTGTGGCAAAGGACACACAGGACCTGGGGCTGTCACTCCTCCGCCTGTGCTaGCCAGAGGTAGTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLSRSSTVAKDTQDLGLSLLRLC*PEVVQP
Trigger: CGGCTGGACTACCTCTGGGCAGCACAGGCGGAGGAG...TGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp CCCTTGTCAAGGTCCTCCACTGTGGCAAAGGACACACAGGACCTGGGGCTGTCAAGAGACGTGGGCGCTTaGCAGGGACCAAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PLSRSSTVAKDTQDLGLSRDVGA*QGPRRL
Trigger: CAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCT...TGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CAGGGCTTACCAGGGCTGGAGCCACCCATAAGCCAGTaGACTTGGGGCTCAGTCATGGTGGGCTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QGLPGLEPPISQ*TWGSVMVGSSA
Trigger: GGCAGAGGAGCCCACCATGACTGAGCCCCAAGTCAACTGGCTTATGGGTGGCTCCAGCCCTGGTAAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTaGGAGACTTGGCATGCAGCCTCCAGCTCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PALGHLRCSLKD*ETWHAASSSPL
Trigger: CAAGGGAGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TTCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTGGACAACGGCGCTGGTaGAGTACTCGTCCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: FTAAPPGPRAPEVQPQRLGQRRW*STRPEA
Trigger: AGCTTCAGGACGAGTACTTCACCAGCGCCGTTGTCC...AAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCATAAGGCAGCCAGGATaGGGGCGAGGACAACGGCGC +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAIRQPG*GRGQRR
Trigger: GCGCCGTTGTCCTCGCCCTCATCCTGGCTGCCTTAT...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CATGGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCACATGAGGAAGTGCTGTaGGACGTGAGCTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGTGRGGPTVAAVRSQQPHEEVL*DVSWQE
Trigger: CTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATG...TGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCCGTCCTCCAGAGACGTaGGCGCTTGGCAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSARPPET*ALGRDQ
Trigger: TTGGTCCCTGCCAAGCGCCCACGTCTCTGGAGGACG...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGCACCCTGGAAAACACTaGACCCGCGTGATGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVHPGKH*TRVMCR
Trigger: CCTGCACATCACGCGGGTCCAGTGTTTTCCAGGGTG...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGACACCCGCAGGAATATaGCTAGTGGGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVTPAGI*LVGGCP
Trigger: TGGGCACCCTCCCACTAGCCATATTCCTGCGGGTGT...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GCATCTTTCTGTCCACTTCTGAGGGGCCCTGTGTCCACACTAAACCCATTGGTGACAGTGGGGGCCGTCTaGCCTGGCCTCCGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ASFCPLLRGPVSTLNPLVTVGAV*PGLRLS
Trigger: GGAGAGGCGGAGGCCAGGCCAGACGGCCCCCACTGT...CACCAATGGGTTTAGTGTGGACACAGGGCCCCTCAGAAGTGGACAGAAAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGATGCAGTTTCGAGCCTaGAGGAAGGCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRMQFRA*RKAFLW
Trigger: CCAGAGGAAGGCCTTCCTGCAGGCTCGAAACTGCAT...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCGTCCCTGGACCCCAGTaGTATCCATCCGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAVPGPQ*YPSDWP
Trigger: TGGCCAGTCGGATGGATAGCACTGGGGTCCAGGGAC...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTCCAGCCCGAAGCCGATaGCCAGTAGGCTGCGCACGG +
Preference number: 4 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLPARSR*PVGCAR
Trigger: CCGTGCGCAGCCTACTGGCCATCGGCTTCGGGCTGG...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCAAGGCGGTGCGGATCTaGATCGTCAGGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAKAVRI*IVRHPG
Trigger: TCCAGGGTGCCTGACGATCCAGATCCGCACCGCCTT...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CTTACCAGGGCTGGAGCCACCCATAAGCCAGTTGACTaGGGGCTCAGTCATGGTGGGCTCCTCTGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LTRAGATHKPVD*GLSHGGLLCQL
Trigger: AAGCTGGCAGAGGAGCCCACCATGACTGAGCCCCAAGTCAACTGGCTTATGGGTGGCTCCAGCCCTGGTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp AGGACTGGTGGCTGGCTCAGTCCGCTCAGCTATATCTaGGAGGGCGGGGTGTGTGTGTACCAATCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTGGWLSPLSYI*EGGVCVYQSWL
Trigger: CAGCCAGGATTGGTACACACACACCCCGCCCTCCAAGATATAGCTGAGCGGACTGAGCCAGCCACCAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCCTCTTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTaGTGCCCACACTGCCAGTGGTGTATGCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: PSSPGMCAPGGQ*CPHCQWCMQEM
Trigger: CATCTCTTGCATACACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACAGCAGCCGGTCCTCAATaGAGTTTCGAGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EREHGGKGSHCTVSAGATAAGPQ*SFEPAG
Trigger: TCCTGCAGGCTCGAAACTGCATTGAGGACCGGCTGC...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp CATGGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCACTGTGCGACGTGAGCTaGCAGGAGATTGAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HGTGRGGPTVAAVRSQQPLCDVS*QEIEED
Trigger: ATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAG...TGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCAAGTGCTGTGCGACGTaGGCTGGCAGGAGATTGAAG +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAKCCAT*AGRRLK
Trigger: CTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTT...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGACCGTCGAGCCCATTaGGCCTCCTGCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLDRRAH*ASCRAP
Trigger: AGGAGCTCTGCAGGAGGCGCAATGGGCTCGACGGTC...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGACACCACAGAGGACCCTaGCGGTGTGTAGGCCCACAC +
Preference number: 4 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGHHRGP*RCVGPH
Trigger: GTGTGGGCCTACACACCGGCAGGGTCCTCTGTGGTG...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GCAGGGTGGGCATGGGTCAGAGTTCCTCTGCAGAAGGTGCTAGATGATACCCTTATCTCCAGCTCTGTCTaGCGGGCTTCGAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: AGWAWVRVPLQKVLDDTLISSSV*RASRRR
Trigger: CCGCCTTCTCGAAGCCCGCCAGACAGAGCTGGAGAT...AAGGGTATCATCTAGCACCTTCTGCAGAGGAACTCTGACCCATGCCCACCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACACAGCAGGATCATCTTTaGCAAGGAGGACACCCGCAG +
Preference number: 4 (lower is better)
Translates to: EREHGGKGSHCTVSAGATQQDHL*QGGHPQ
Trigger: CTGCGGGTGTCCTCCTTGCCAAAGATGATCCTGCTG...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp AGTGTGCCCCAAGGGGTGGCTTGGGCACATTTCCCATaGGCCTCAGGCCACACTCAGACAATGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVPQGVAWAHFP*ASGHTQTMLLL
Trigger: GAGGAGAAGCATTGTCTGAGTGTGGCCTGAGGCCAATGGGAAATGTGCCCAAGCCACCCCTTGGGGCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CTGTCGCAGCAGTCAGAAGCCAGCAGCCAGGAGGGGTaGGAAGAGAATGTACGGGCCAGGAGATCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LSQQSEASSQEG*EENVRARRSEV
Trigger: CACTTCTGATCTCCTGGCCCGTACATTCTCTTCCAACCCCTCCTGGCTGCTGGCTTCTGACTGCTGCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGGGATCGGACATTGGTaGCCACGAACAGCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLGIGHW*PRTAPG
Trigger: TCCTGGCGCTGTTCGTGGTCACCAATGTCCGATCCC...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCAAGACGAACGGTTTCTaGGCTTCTCCGAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSAKTNGF*ASPRLF
Trigger: GAACAGCCTCGGAGAAGCTCAGAAACCGTTCGTCTT...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GCAGGGTGGGCATGGGTCAGAGTTCCTCTGCAGAAGGTGCTAGATGATACCCTTAACACTGGACCCGCGTaGTGTGCAGGTACAGGGTAC +
Preference number: 4 (lower is better)
Translates to: AGWAWVRVPLQKVLDDTLNTGPA*CAGTGY
Trigger: GTACCCTGTACCTGCACATCACGCGGGTCCAGTGTT...AAGGGTATCATCTAGCACCTTCTGCAGAGGAACTCTGACCCATGCCCACCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GTCCCGCCACCTATGGCAACACTAGCCAGGCATAACCAGGTCATTAGGAAGAGAGGATGGAGGCAAACATaGCGCCCACCTGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VPPPMATLARHNQVIRKRGWRQT*RPPGSR
Trigger: CCTACTCCCAGGTGGGCGTCATGTTTGCCTCCATCC...TCTCTTCCTAATGACCTGGTTATGCCTGGCTAGTGTTGCCATAGGTGGCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp AACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTGCTCACAAGGAAGAGGGAGCCCTGGTCTaGCTGGGGGTCCAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: NHRVTDLISYYWTCAHKEEGALV*LGVQPR
Trigger: CCGCGGCTGGACCCCCAGTCAGACCAGGGCTCCCTC...TTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GTCCCGCCACCTATGGCAACACTAGCCAGGCATAACCAGGTCATTAGGAAGAGACCCTGCTGCTGTGGATaGCAGGTACTGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VPPPMATLARHNQVIRKRPCCCG*QVLASG
Trigger: CCCACTAGCCAGTACCTGTCATCCACAGCAGCAGGG...TCTCTTCCTAATGACCTGGTTATGCCTGGCTAGTGTTGCCATAGGTGGCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CATGGCACAGGAAGAGGAGGGCCCACTGTCGCAGCAGTCAGAAGCCAGCAGCCAATGAGCAACCGTTCCTaGTTCTCATTCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: HGTGRGGPTVAAVRSQQPMSNRS*FSFSSS
Trigger: GGAGGATGAGAATGAGAAGCAGGAACGGTTGCTCAT...TGGCTGCTGGCTTCTGACTGCTGCGACAGTGGGCCCTCCTCTTCCTGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GTCCCGCCACCTATGGCAACACTAGCCAGGCATAACCAGGTCATTAGGAAGAGATGTCGTACTGGGGCCTaGGAGCACCGATCACTCCAG +
Preference number: 4 (lower is better)
Translates to: VPPPMATLARHNQVIRKRCRTGA*EHRSLQ
Trigger: CTGGAGTGATCGGTGCTCGCAGGCCCCAGTACGACA...TCTCTTCCTAATGACCTGGTTATGCCTGGCTAGTGTTGCCATAGGTGGCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp AGGGCACCTGAGGTGCAGCCTCAAAGACTTGGAGACTaGGCATGCAGCCTCCAGCTCTCCCTTGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: RAPEVQPQRLGD*ACSLQLSLAES
Trigger: ACTTTCAGCAAGGGAGAGCTGGAGGCTGCATGCCAAGTCTCCAAGTCTTTGAGGCTGCACCTCAGGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGACACAGCAGTGGGCGTaGTCCGTCTTAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVTQQWA*SVLGWV
Trigger: CACCCAGCCTAAGACGGATCACGCCCACTGCTGTGT...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GAAAGGGAGCACGGTGGGAAAGGGAGCCACTGCACAGTAAGTGCTGGAGCCACACCTCAGCCACGGATGTaGTGGTATCGATCATGTCAA +
Preference number: 4 (lower is better)
Translates to: EREHGGKGSHCTVSAGATPQPRM*WYRSCQ
Trigger: TTGACATGATCGATACCATCACATCCGTGGCTGAGG...TGTGGCTCCAGCACTTACTGTGCAGTGGCTCCCTTTCCCACCGTGCTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCAAGGGAACTGTTAGACTaGGAGCTCCAGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPARELLD*ELQAQG
Trigger: GCCCTGGGCCTGGAGCTCTCAGTCTAACAGTTCCCT...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGTTCCTCCTCCGCCTGTaGTGCCCAGAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVFLLRL*CPEVVQ
Trigger: CTGGACTACCTCTGGGCAGCACAGGCGGAGGAGGAA...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCACTCATGGCCATGACCTaGCTCCACCTCGTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPALMAMT*LHLVVP
Trigger: GGGGACTACGAGGTGGAGCCAGGTCATGGCCATGAG...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCCAGCGGGGCCAACTTCCCAGTCTGGCACTCATACTaGAAACTGCTACCCAGGCTTGGAGTTACCCATAAG +
Preference number: 4 (lower is better)
Translates to: PSGANFPVWHSY*KLLPRLGVTHK
Trigger: CTTATGGGTAACTCCAAGCCTGGGTAGCAGTTTCAAGTATGAGTGCCAGACTGGGAAGTTGGCCCCGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp GAAGACCTGCCTCTGGCTGTTAGCAAGAGCCTACTCTaGGGGAAAGCCAGCAACCCCGCTCTTCATGCAGTA +
Preference number: 4 (lower is better)
Translates to: EDLPLAVSKSLL*GKASNPALHAV
Trigger: TACTGCATGAAGAGCGGGGTTGCTGGCTTTCCCCAAGAGTAGGCTCTTGCTAACAGCCAGAGGCAGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp GGCTTTGCTCTGCCCTATTCTAAGAAGATAGGACCCTaGGAAGGGGGCAAGCTCTTGGGGAGCCGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GFALPYSKKIGP*EGGKLLGSREE
Trigger: TTCCTCACGGCTCCCCAAGAGCTTGCCCCCTTCCAAGGGTCCTATCTTCTTAGAATAGGGCAGAGCAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp CATCACCCTGGAGCAGGGACACCACACCTAGACTCAGGAATGCACACTGTGCCGCATAGGACACGAAGGTaGCCAAAAGGAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: HHPGAGTPHLDSGMHTVPHRTRR*PKGVAK
Trigger: TTTGGCAACTCCTTTTGGTCACCTTCGTGTCCTATG...CGGCACAGTGTGCATTCCTGAGTCTAGGTGTGGTGTCCCTGCTCCAGGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TTCCCCAGGCATGTGTGCTCCTGGTGGCCAGTTGTGCCCACACTGCCAGTGGTGAAGGTCTCAATGTTGTaGGTTCTCAGAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: FPRHVCSWWPVVPTLPVVKVSML*VLRKVF
Trigger: GAACACCTTTCTGAGAACTCACAACATTGAGACCTT...CACCACTGGCAGTGTGGGCACAACTGGCCACCAGGAGCACACATGCCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCGCATGCCTACCTAGGTTCTGGCTCAGAGGAATCTGCCCCTTCTCAGAGCGCCGATAGCACACAGTCTTaGACTTCATCCTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHAYLGSGSEESAPSQSADSTQS*TSSSWL
Trigger: CAGCCAAGAGGATGAAGTTCAAGACTGTGTGCTATC...GGCGCTCTGAGAAGGGGCAGATTCCTCTGAGCCAGAACCTAGGTAGGCATGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp CTTGGCCACATGCTCCAAATGTGGGCTTCAAGCAACTCTTGCCCACAAGAGACCGCACACAAACTGGTATaGGCACCTCTTCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGHMLQMWASSNSCPQETAHKLV*APLQQP
Trigger: CGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGC...GGTCTCTTGTGGGCAAGAGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp AGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTTGGATGGACACCCACCCGGCAGATCGTCAGGCACCCTaGAAAACACTGGACCCGCGT +
Preference number: 4 (lower is better)
Translates to: RLMSFCSLLRVWMDTHPADRQAP*KTLDPR
Trigger: ACGCGGGTCCAGTGTTTTCCAGGGTGCCTGACGATC...TGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TCCAGAATCCTGTACCCTAACGGGATTTCCTCACAGTaGCAGTTACTGGGACACACAGGTGGGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRILYPNGISSQ*QLLGHTGGRSQ
Trigger: CTGGGACCTCCCACCTGTGTGTCCCAGTAACTGCAACTGTGAGGAAATCCCGTTAGGGTACAGGATTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp ATGGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTaGGCCAGTTTCAGCTCCTTGTGGTTATGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: MALMVCLLYTQA*ASFSSLWLWAC
Trigger: GCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp GGTTCCCATATCCATCCAAAAGTGCCCTCTGAATTCTaGGAGGTGAGGCAGACTCTGCAGGGTGTCGACACC +
Preference number: 4 (lower is better)
Translates to: GSHIHPKVPSEF*EVRQTLQGVDT
Trigger: GGTGTCGACACCCTGCAGAGTCTGCCTCACCTCCAAGAATTCAGAGGGCACTTTTGGATGGATATGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CATGGGAGAGGCAGCCATGCTTTCTGCCATGCACCATaGCCCCTTCCTTGCTTTCTATGCACTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HGRGSHAFCHAP*PLPCFLCTPGE
Trigger: TTCTCCAGGAGTGCATAGAAAGCAAGGAAGGGGCAATGGTGCATGGCAGAAAGCATGGCTGCCTCTCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGTTTTCCGGCAGTGCATaGGCTGCACCAGCAGATAGC +
Preference number: 4 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVFSGSA*AAPADS
Trigger: GCTATCTGCTGGTGCAGCTCATGCACTGCCGGAAAA...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGAAGGGGATCTCAGCCTTaGACATTTTCCGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGRGSQP*TFSGSA
Trigger: TGCACTGCCGGAAAATGTTCAAGGCTGAGATCCCCT...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp AATGCCCCCTTTGTCCATGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTTCCGGGGATTGGACATaGGGAAGTGCTGTGCGACGT +
Preference number: 4 (lower is better)
Translates to: NAPFVHAPSIPLRDSKLSSGDWT*GSAVRR
Trigger: ACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGA...AGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCATGGACAAAGGGGGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGCCAGCGCTTTCAGCGTaGCCGCCTGCTCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWPALSA*PPAPAA
Trigger: TGCGGCTGGAGCAGGCGGCCACGCTGAAAGCGCTGG...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTaGTGGTTATGGGCGTGCGTGACATCCTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLYTQALASFSS*WLWACVTSWLL
Trigger: AAGAAGCCAGGATGTCACGCACGCCCATAACCACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TTCTATGACAGAAGGGGTCCGGAAGCCCTGGTGGCTTaGGAGTCTGAGAAACAACTGGATTGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FYDRRGPEALVA*ESEKQLDCCVW
Trigger: CCACACACAGCAATCCAGTTGTTTCTCAGACTCCAAAGCCACCAGGGCTTCCGGACCCCTTCTGTCATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCTGAGGTTGATGTCATTTTGTTCCCTCCTCAGAGTTaGGATGGACACCCACCCGGCATGTGGAGTTACCAC +
Preference number: 4 (lower is better)
Translates to: PEVDVILFPPQS*DGHPPGMWSYH
Trigger: GTGGTAACTCCACATGCCGGGTGGGTGTCCATCCAAACTCTGAGGAGGGAACAAAATGACATCAACCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TCATTGCTGTGCCTGCCTGCTGGAAGCATGAGAGCATaGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLCLPAGSMRA*NVRAVTGARLA
Trigger: AGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCTCTCATGCTTCCAGCAGGCAGGCACAGCAATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGAGCCAGTGTGCATAGGTaGGAGGAGATGGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGASVHR*EEMDFL
Trigger: TAAGAAGTCCATCTCCTCCCACCTATGCACACTGGC...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTCCACCAAGAAGCAGATaGAAAATACCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLPPRSR*KIPAAA
Trigger: TGCTGCTGCTGGTATTTTCCATCTGCTTCTTGGTGG...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGCCTCTGCACACAAACTaGTATGAGCACCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVPLHTN*YEHLFS
Trigger: GCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGG...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp AGAAGTTCTGCACAGGCTGTAAAAGATCCCTGGGACTaGGAGAGTCCTAGAACTTACCTGCTGAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSAQAVKDPWD*ESPRTYLLRVA
Trigger: AGCCACCCTCAGCAGGTAAGTTCTAGGACTCTCCAAGTCCCAGGGATCTTTTACAGCCTGTGCAGAACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CAGCCATGCTTTCTGCCATGCACCATTGCCCCTTCCTaGCTTTCTATGCACTCCTGGAGAACTCTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: QPCFLPCTIAPS*LSMHSWRTLSN
Trigger: GTTAGAGAGAGTTCTCCAGGAGTGCATAGAAAGCAAGGAAGGGGCAATGGTGCATGGCAGAAAGCATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GGCATAACCAGGTCATTAGGAAGAGACAGAGCTCAGTGTGCCCCAAGGGGTGGCTGTAGGACTGGTAGTTaGTTTCATCCAGAACATCAA +
Preference number: 4 (lower is better)
Translates to: GITRSLGRDRAQCAPRGGCRTGS*FHPEHQ
Trigger: TTGATGTTCTGGATGAAATCAACTACCAGTCCTACA...GCCACCCCTTGGGGCACACTGAGCTCTGTCTCTTCCTAATGACCTGGTTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp TTCAATGTATTTCATGTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTGGGTGACCAAAAGGAGTTaGCAAACCCCCTGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: FNVFHVLIFRSATETQSWVTKRS*QTPCSA
Trigger: CGCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCAC...CCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGACATGAAATACATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATAGTCTGACATCCACTTaGCTGGCGTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYSLTST*LACRAS
Trigger: GCTGGCCCTGCACGCCAGGCAAGTGGATGTCAGACT...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCCGTTAAAGCAAGTCATTTGCACAGTCTCAGCGGGTaGCTGTTAGCACAGTGGTACAAGAGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVKASHLHSLSG*LLAQWYKSPSA
Trigger: AGCTGAAGGACTCTTGTACCACTGTGCTAACAGCAACCCGCTGAGACTGTGCAAATGACTTGCTTTAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGCCACGGGGCCAACGTTaGTGCCAACTCGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWPRGQR*CQLGEQ
Trigger: TTGTTCTCCGAGTTGGCATCAACGTTGGCCCCGTGG...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTCGATGGCCAGTAGGCTaGGCACGGGCAGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ASKTHIISKLPSLLFINFRWPVG*ARAARH
Trigger: ATGCCTTGCTGCCCGTGCGCAGCCTACTGGCCATCG...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAACTTAGCCCTGGTTCCTaGTGTGGGCGCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKLSPGS*CGRQPH
Trigger: GTGGGGCTGGCGCCCACAGCAGGAACCAGGGCTAAG...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGATGTTTCCATCAGTCCTaGCTTCTAGAAAGTACGTTA +
Preference number: 4 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGCFHQS*LLESTL
Trigger: TAACGTACTTTCTAGAAGGCAGGACTGATGGAAACA...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp AGCATTGAATGTAAGAGCTGTAACTGGAGCCAGGCTGGCTGGGCAGTGTGGCTTAATATCTTCCTCCGATaGGATGGCACAATAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SIECKSCNWSQAGWAVWLNIFLR*DGTIKK
Trigger: CTTCTTTATTGTGCCATCCCATCGGAGGAAGATATT...AAGCCACACTGCCCAGCCAGCCTGGCTCCAGTTACAGCTCTTACATTCAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp TTCAATGTATTTCATGTCCTCATCTTCAGGTCAGCAACAGAGACTCAGTCCTGGGAGCTGGCAGGAGATTaGAGAGGATCCTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FNVFHVLIFRSATETQSWELAGD*RGSSCC
Trigger: ACAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTC...CCAGGACTGAGTCTCTGTTGCTGACCTGAAGATGAGGACATGAAATACATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TGCACCCTCTATCCCACTAAGGGACTCAAAGCTTTCTaGATAAACACAGGACACAGGTGCTTACACATGCCT +
Preference number: 4 (lower is better)
Translates to: CTLYPTKGLKAF*INTGHRCLHMP
Trigger: AGGCATGTGTAAGCACCTGTGTCCTGTGTTTATCAAGAAAGCTTTGAGTCCCTTAGTGGGATAGAGGGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGAACATTTTCCGGCAGTaGATGAGCTGCACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWNIFRQ*MSCTSR
Trigger: TCTGCTGGTGCAGCTCATGCACTGCCGGAAAATGTT...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp AACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTGCTCACAAGGAAGACAGCCACACTCTGTaGGATTACCAGAAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: NHRVTDLISYYWTCAHKEDSHTL*DYQKVD
Trigger: ATCTACCTTCTGGTAATCCCACAGAGTGTGGCTGTC...TTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp GTGGCACTGGTTGACTATGTAGGTACAGGAGTTGCTTaGGGTCAAACAGCATCCATTTCAACCACATTCATC +
Preference number: 4 (lower is better)
Translates to: VALVDYVGTGVA*GQTASISTTFI
Trigger: GATGAATGTGGTTGAAATGGATGCTGTTTGACCCAAAGCAACTCCTGTACCTACATAGTCAACCAGTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CAACAAGAAGCCAAGAAATACAGAACCAAACAGCACTaGGCCACATGCTCCAAATGTGGGCTTCAAGCAACT +
Preference number: 4 (lower is better)
Translates to: QQEAKKYRTKQH*ATCSKCGLQAT
Trigger: AGTTGCTTGAAGCCCACATTTGGAGCATGTGGCCAAGTGCTGTTTGGTTCTGTATTTCTTGGCTTCTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTCGAAGTCTGCCAGTGTaGATAGGTGGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: ASKTHIISKLPSLLFINFRSLPV*IGGRRW
Trigger: CCATCTCCTCCCACCTATGCACACTGGCAGACTTCG...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CTCCCTCTCTGCCTCACATTCTCAGGACAATGTGTATaGAGTATTAGCAAACCACTTCCTTCCCATGAACAA +
Preference number: 4 (lower is better)
Translates to: LPLCLTFSGQCV*SISKPLPSHEQ
Trigger: TTGTTCATGGGAAGGAAGTGGTTTGCTAATACTCAATACACATTGTCCTGAGAATGTGAGGCAGAGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGGTGAAGTACTCGTCCTaGAGCTGGTGGTATTTTTGT +
Preference number: 4 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWVKYSS*SWWYFC
Trigger: ACAAAAATACCACCAGCTTCAGGACGAGTACTTCAC...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGGTCGTCTTTGTGATGTaGACCTTCCCTGGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLVVFVM*TFPGKP
Trigger: TGGCTTACCAGGGAAGGTCCACATCACAAAGACGAC...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAACGCAGGTCATCACGTTaGAGAAGGGGATCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKRRSSR*RRGSQP
Trigger: AGGCTGAGATCCCCTTCTCCAACGTGATGACCTGCG...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TATAGTGGGTCAATCGCTCTTAGCATAAACGAAGGCTaGATTCTTGTTAGACTTACAGCGTCCAAGACACCA +
Preference number: 4 (lower is better)
Translates to: YSGSIALSINEG*ILVRLTASKTP
Trigger: TGGTGTCTTGGACGCTGTAAGTCTAACAAGAATCAAGCCTTCGTTTATGCTAAGAGCGATTGACCCACTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp AATGAACCACAGAGTGACAGATCTCATCTCCTATTATaGGACCTGTGCTCACAAGGAATAAACAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NEPQSDRSHLLL*DLCSQGINKGS
Trigger: GGAACCCTTGTTTATTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CACCCAGACCAGAATGATGCTATTATATCGGTCTTTTaGCAAAAGAGACTTAGTAGTAGGCTGAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: HPDQNDAIISVF*QKRLSSRLSGS
Trigger: TGAGCCACTCAGCCTACTACTAAGTCTCTTTTGCAAAAAGACCGATATAATAGCATCATTCTGGTCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp GCAAATGGCTGGAAATGTTTGGAAACCAATACATCTGAAGTGGATGTAGTCTGGCAACACCCATGTTGTTaGCATCCAGTTCTATGTAGA +
Preference number: 4 (lower is better)
Translates to: ANGWKCLETNTSEVDVVWQHPCC*HPVLCR
Trigger: TCTACATAGAACTGGATGGCAACAACATGGGTGTTG...CCAGACTACATCCACTTCAGATGTATTGGTTTCCAAACATTTCCAGCCATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR TCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTAGTCACCAAGGATCTTaGTTCGGCGACAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ASKTHIISKLPSLLFINFSHQGS*FGDSGF
Trigger: AAAACCACTGTCGCCGAATCAAGATCCTTGGTGACT...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR GCA 90 bp TCACAAGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGGAAACCCACGATGTCTaGAAACAGGATGCTCACATT +
Preference number: 4 (lower is better)
Translates to: SQVKRRLFITKPQGTLWLETHDV*KQDAHI
Trigger: AATGTGAGCATCCTGTTTGCAGACATCGTGGGTTTC...CAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CCA 90 bp GCTTCAAAGACCCACATAATATCCAAGCTGCCATCCTTGCTCTTTATTAATTTTGACAGTGGTTTTCCGTaGCTAACTCATCGAACTTGC +
Preference number: 4 (lower is better)
Translates to: ASKTHIISKLPSLLFINFDSGFP*LTHRTC
Trigger: GCAAGTTCGATGAGTTAGCCACGGAAAACCACTGTC...AAAATTAATAAAGAGCAAGGATGGCAGCTTGGATATTATGTGGGTCTTTGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp TGCTCTTTATTAATTTTATCAAGCCAAGCACACCCTTaGCAAGTTGAAGCCATTAAAAAGCACGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: CSLLILSSQAHP*QVEAIKKHEQV
Trigger: GACTTGCTCGTGCTTTTTAATGGCTTCAACTTGCAAAGGGTGTGCTTGGCTTGATAAAATTAATAAAGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
3UTR CAA 72 bp CCTGCCAAGCCTATAGTTGTAAATAGAAATGAGCTATaGGTTCAAGCCTGCTATAGAAACATTCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PAKPIVVNRNEL*VQACYRNIQSQ
Trigger: TTGGCTTTGAATGTTTCTATAGCAGGCTTGAACCAATAGCTCATTTCTATTTACAACTATAGGCTTGGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp TGGAGGGAGCCCTGGTCTGACTGGGGGTCCAGCCGCGGGACACAGTaGGGGCCGTCTGGCCTGGCCTCCGCCTCTCCCATAAGGACACAT +
Preference number: 5 (lower is better)
Translates to: WREPWSDWGSSRGTQ*GPSGLASASPIRTH
Trigger: ATGTGTCCTTATGGGAGAGGCGGAGGCCAGGCCAGACGGCCCCCACTGTGTCCCGCGGCTGGACCCCCAGTCAGACCAGGGCTCCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp GCGTCCTCCAGAGACGTGGGCGCTTGGCAGGGACCAAGGCGGCTGTaGCCAGTAAGTGCGAGGCAGCCACCACCAGCCCGAAGCCGATGG +
Preference number: 5 (lower is better)
Translates to: ASSRDVGAWQGPRRL*PVSARQPPPARSRW
Trigger: CCATCGGCTTCGGGCTGGTGGTGGCTGCCTCGCACTTACTGGTCACAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCTGGAGGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp AATATGGCTAGTGGGAGGGTGCCCACCAGGCAGCAGAGCAGGGCATaGTGTGCAGACTCACAGGGCAGGGCAGGCAGCACAGTGCGCCGG +
Preference number: 5 (lower is better)
Translates to: NMASGRVPTRQQSRA*CADSQGRAGSTVRR
Trigger: CCGGCGCACTGTGCTGCCTGCCCTGCCCTGTGAGTCTGCACACCATGCCCTGCTCTGCTGCCTGGTGGGCACCCTCCCACTAGCCATATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp GGGCAGCAGAGTAGCGCGAAGGTGAGGCTGAAGAACAGCGCCAGCTaGCCGACCTGCTGCAGCTGGGACACCTGCAGGGATCGGACATTG +
Preference number: 5 (lower is better)
Translates to: GQQSSAKVRLKNSAS*PTCCSWDTCRDRTL
Trigger: CAATGTCCGATCCCTGCAGGTGTCCCAGCTGCAGCAGGTCGGTCAGCTGGCGCTGTTCTTCAGCCTCACCTTCGCGCTACTCTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp TGGCCAGTAGGCTGCGCACGGGCAGCAAGGCATAGGACACGAAGGTaGCCAAAAGGAGTTGCCAAACCCCCTGCTCGGCGACCGTCGAGC +
Preference number: 5 (lower is better)
Translates to: WPVGCARAARHRTRR*PKGVAKPPARRPSS
Trigger: GCTCGACGGTCGCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCACCTTCGTGTCCTATGCCTTGCTGCCCGTGCGCAGCCTACTGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp GACCGACCTGCTGCAGCTGGGACACCTGCAGGGATCGGACATTGGTaGCCACGAACAGCGCCAGGAAAAGGATGCAGTGCACTGGGTGCG +
Preference number: 5 (lower is better)
Translates to: DRPAAAGTPAGIGHW*PRTAPGKGCSALGA
Trigger: CGCACCCAGTGCACTGCATCCTTTTCCTGGCGCTGTTCGTGGTCACCAATGTCCGATCCCTGCAGGTGTCCCAGCTGCAGCAGGTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp GTTCCTCCTCCGCCTGTGCTGCCCAGAGGTAGTCCAGCCGTAGTCTaGCATCCACTTGCCTGGCGTGCAGGGCCAGCGTGCATGAGAACA +
Preference number: 5 (lower is better)
Translates to: VPPPPVLPRGSPAVV*HPLAWRAGPACMRT
Trigger: TGTTCTCATGCACGCTGGCCCTGCACGCCAGGCAAGTGGATGTCAGACTACGGCTGGACTACCTCTGGGCAGCACAGGCGGAGGAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 90 bp TTCTCATCCTCCAGCCGCAGCCGGTCCTCAATGCAGTTTCGAGCCTaGAGGAAGGCCTTCCTCTGGGAGCGCTCTGTCAAGATCCGCACG +
Preference number: 5 (lower is better)
Translates to: FSSSSRSRSSMQFRA*RKAFLWERSVKIRT
Trigger: CGTGCGGATCTTGACAGAGCGCTCCCAGAGGAAGGCCTTCCTGCAGGCTCGAAACTGCATTGAGGACCGGCTGCGGCTGGAGGATGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 90 bp GTTCCTGCTTCTCATTCTCATCCTCCAGCCGCAGCCGGTCCTCAATaGAGTTTCGAGCCTGCAGGAAGGCCTTCCTCTGGGAGCGCTCTG +
Preference number: 5 (lower is better)
Translates to: VPASHSHPPAAAGPQ*SFEPAGRPSSGSAL
Trigger: CAGAGCGCTCCCAGAGGAAGGCCTTCCTGCAGGCTCGAAACTGCATTGAGGACCGGCTGCGGCTGGAGGATGAGAATGAGAAGCAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CCCTTGTCAAGGTCCTCCACTGTGGCAAAGGACACACAGGACCTGGGGCTGTCAACCACGGGGCCAACGTaGATGCCAACTCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: PLSRSSTVAKDTQDLGLSTTGPT*MPTRRT
Trigger: TGTTCTCCGAGTTGGCATCAACGTTGGCCCCGTGGT...TGACAGCCCCAGGTCCTGTGTGTCCTTTGCCACAGTGGAGGACCTTGACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGAGGTGACCAAAAGGAGTaGCCAAACCCCCTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGGDQKE*PNPLLG
Trigger: GCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCACC...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp AGCCCACCACACAGCCTTGAGCTACCGAGTAGATTAAGACCACTATaGACACACACAAGGCGGTGCGGATCTGGATCGTCAGGCACCCTG +
Preference number: 5 (lower is better)
Translates to: SPPHSLELPSRLRPL*THTRRCGSGSSGTL
Trigger: CAGGGTGCCTGACGATCCAGATCCGCACCGCCTTGTGTGTGTTCATAGTGGTCTTAATCTACTCGGTAGCTCAAGGCTGTGTGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp AGAACATCAAACATGTCGATGGCGAAGTCTGCCAGTGTGCATAGGTaGGAGGAGATGGACTTCTTAGCCCTGGTTCCTGCTGTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: RTSNMSMAKSASVHR*EEMDFLALVPAVGA
Trigger: GGCGCCCACAGCAGGAACCAGGGCTAAGAAGTCCATCTCCTCCCACCTATGCACACTGGCAGACTTCGCCATCGACATGTTTGATGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp ATCTCTCCCTTGCCCTTCACGCTGACTTTGCCTCTGCACACAAACTaGTATGAGCACCTCTTCAGCAGCCGGTGGACTTCCTCAGTCACC +
Preference number: 5 (lower is better)
Translates to: ISPLPFTLTLPLHTN*YEHLFSSRWTSSVT
Trigger: GGTGACTGAGGAAGTCCACCGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGGCAAAGTCAGCGTGAAGGGCAAGGGAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGAAGAAGAGCAGGGCATaGGCACCGAGCGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVKKSRA*APSVLQ
Trigger: CTGGAGGACGCTCGGTGCCAATGCCCTGCTCTTCTT...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CCACACCTAGACTCAGGAATGCACACTGTGCCGACTCTGAAACCACCAAGAGGAGCAGCCTCCATGACATaGGCCAGGGTCACGTCATTG +
Preference number: 5 (lower is better)
Translates to: PHLDSGMHTVPTLKPPRGAASMT*ARVTSL
Trigger: CAATGACGTGACCCTGGCCAATGTCATGGAGGCTGC...TCCTCTTGGTGGTTTCAGAGTCGGCACAGTGTGCATTCCTGAGTCTAGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp TCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTGTGCGGCTGATGTACCTGTaGACGCGTGTACCCGGAGTG +
Preference number: 5 (lower is better)
Translates to: SDGLPAVYSGFGQFQLLVRLMYL*TRVPGV
Trigger: CACTCCGGGTACACGCGTCAACAGGTACATCAGCCG...CACAAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp AGGTCCATGTTCCGGGGATTGGACATGAGGAAGTGCTGTGCGACGTaGGCTGGCAGGAGATTGAAGAGGATCCTCTTGTTGTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RSMFRGLDMRKCCAT*AGRRLKRILLLSSL
Trigger: CAAGCTGGACAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAACATGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp TCCCTTGCCCTTCACGCTGACTTTGCCTCTGCACACAAACTGGTATaGGCACCTCTTCAGCAGCCGGTGGACTTCCTCAGTCACCTGAAT +
Preference number: 5 (lower is better)
Translates to: SLALHADFASAHKLV*APLQQPVDFLSHLN
Trigger: ATTCAGGTGACTGAGGAAGTCCACCGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGGCAAAGTCAGCGTGAAGGGCAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp AACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTGCTCACAAGGAACAGAGACGTGGGCGCTaGGCAGGGACCAAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: NHRVTDLISYYWTCAHKEQRRGR*AGTKAA
Trigger: AGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCTG...TTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp GCAGGGTGGGCATGGGTCAGAGTTCCTCTGCAGAAGGTGCTAGATGATACCCTTGCCAGGGTCACGTCATaGGACCATACATCATACTGC +
Preference number: 5 (lower is better)
Translates to: AGWAWVRVPLQKVLDDTLARVTS*DHTSYC
Trigger: GCAGTATGATGTATGGTCCAATGACGTGACCCTGGC...AAGGGTATCATCTAGCACCTTCTGCAGAGGAACTCTGACCCATGCCCACCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 90 bp GTAGTAGAGGTCCATGTTCCGGGGATTGGACATGAGGAAGTGCTGTaGGACGTGAGCTGGCAGGAGATTGAAGAGGATCCTCTTGTTGTC +
Preference number: 5 (lower is better)
Translates to: VVEVHVPGIGHEEVL*DVSWQEIEEDPLVV
Trigger: GACAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAACATGGACCTCTACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 90 bp GTTCCAAGCGAAAGGTCCTGCCGTGGGAACTGTTTCCATCAGTCCTaGCTTCTAGAAAGTACGTTAGCATCTCTCCCTTGCCCTTCACGC +
Preference number: 5 (lower is better)
Translates to: VPSERSCRGNCFHQS*LLESTLASLPCPSR
Trigger: GCGTGAAGGGCAAGGGAGAGATGCTAACGTACTTTCTAGAAGGCAGGACTGATGGAAACAGTTCCCACGGCAGGACCTTTCGCTTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 90 bp CGCCTCTCCCATAAGGACACATCCTTCGTTCCAAGCGAAAGGTCCTaGCGTGGGAACTGTTTCCATCAGTCCTGCCTTCTAGAAAGTACG +
Preference number: 5 (lower is better)
Translates to: RLSHKDTSFVPSERS*RGNCFHQSCLLEST
Trigger: CGTACTTTCTAGAAGGCAGGACTGATGGAAACAGTTCCCACGGCAGGACCTTTCGCTTGGAACGAAGGATGTGTCCTTATGGGAGAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp TACTTCAGAGTAAAGAAGTTCAGATCGGCCATCTCCAGCTCTGTCTaGCGGGCTTCGAGAAGGCGGCTGATGTACCTGTTGACGCGTGTA +
Preference number: 5 (lower is better)
Translates to: YFRVKKFRSAISSSV*RASRRRLMYLLTRV
Trigger: TACACGCGTCAACAGGTACATCAGCCGCCTTCTCGAAGCCCGCCAGACAGAGCTGGAGATGGCCGATCTGAACTTCTTTACTCTGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp CATGTTCCGGGGATTGGACATGAGGAAGTGCTGTGCGACGTGAGCTaGCAGGAGATTGAAGAGGATCCTCTTGTTGTCCAGCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: HVPGIGHEEVLCDVS*QEIEEDPLVVQLDS
Trigger: AGAGTCAAGCTGGACAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp GGCTCTGATGGTCTGCCTGCTGTATACTCAGGCTTTGGCCAGTTTCAGCTCCTTAAGGGGATCTCAGCCTaGAACATTTTCCGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GSDGLPAVYSGFGQFQLLKGISA*NIFRQC
Trigger: GCACTGCCGGAAAATGTTCAAGGCTGAGATCCCCTT...AAGGAGCTGAAACTGGCCAAAGCCTGAGTATACAGCAGGCAGACCATCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp TTCACAGCTGCCCCACCCGGCCCTAGGGCACCTGAGGTGCAGCCTCAAAGACTTTCTCGTTCGACATGTTaGTACTTCAGAGTAAAGAAG +
Preference number: 5 (lower is better)
Translates to: FTAAPPGPRAPEVQPQRLSRSTC*YFRVKK
Trigger: CTTCTTTACTCTGAAGTACAAACATGTCGAACGAGA...AAGTCTTTGAGGCTGCACCTCAGGTGCCCTAGGGCCGGGTGGGGCAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp AAGAACCCCTCGTGCAGCAGTCATCAGCCAGCATCAGGACCAGGCCACCCCAGGAAGCTGGTGGTATTTTaGTTCTCGTTCGACATGTTT +
Preference number: 5 (lower is better)
Translates to: KNPSCSSHQPASGPGHPRKLVVF*FSFDMF
Trigger: AAACATGTCGAACGAGAACAAAAATACCACCAGCTT...CCTGGGGTGGCCTGGTCCTGATGCTGGCTGATGACTGCTGCACGAGGGGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp AGTAAAAAGAAGGTTGTTTATCACCAAACCCCAAGGTACATTATGGCTGCACGTCGACCGTCGAGCCCATaGCGCCTCCTGCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SKKKVVYHQTPRYIMAARRPSSP*RLLQSS
Trigger: GGAGCTCTGCAGGAGGCGCAATGGGCTCGACGGTCG...ACGTGCAGCCATAATGTACCTTGGGGTTTGGTGATAAACAACCTTCTTTTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 90 bp TGCCTTCTAGAAAGTACGTTAGCATCTCTCCCTTGCCCTTCACGCTaGCTTTGCCTCTGCACACAAACTGGTATGAGCACCTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CLLESTLASLPCPSR*LCLCTQTGMSTSSA
Trigger: TGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGGCAAAGTCAGCGTGAAGGGCAAGGGAGAGATGCTAACGTACTTTCTAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 90 bp CTGCACCAGCAGATAGCACACAGTCTTGAACTTCATCCTCTTGGCTaGTTTGATATCCGAGAGAATCAAGCCTGGGAATATCTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: LHQQIAHSLELHPLG*FDIRENQAWEYLPP
Trigger: CGGAGGAAGATATTCCCAGGCTTGATTCTCTCGGATATCAAACCAGCCAAGAGGATGAAGTTCAAGACTGTGTGCTATCTGCTGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATTCCATGTTCCGGGGATaGGACATGAGGAAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYSMFRG*DMRKCC
Trigger: ACAGCACTTCCTCATGTCCAATCCCCGGAACATGGA...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATCAGTCACCAAGGATCTaGATTCGGCGACAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYQSPRI*IRRQWF
Trigger: AAACCACTGTCGCCGAATCAAGATCCTTGGTGACTG...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp AACCACAGAGTGACAGATCTCATCTCCTATTATTGGACCTGTGCTCACAAGGAATTGAAGAGGATCCTCTaGTTGTCCAGCTTGACTCTC +
Preference number: 5 (lower is better)
Translates to: NHRVTDLISYYWTCAHKELKRIL*LSSLTL
Trigger: GAGAGTCAAGCTGGACAACAAGAGGATCCTCTTCAA...TTCCTTGTGAGCACAGGTCCAATAATAGGAGATGAGATCTGTCACTCTGTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATCACTCAACACCCATGTaGTTGCCATCCAGTTCTATG +
Preference number: 5 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYHSTPM*LPSSSM
Trigger: CATAGAACTGGATGGCAACAACATGGGTGTTGAGTG...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CAGACAGATCTAAGTGGCCTGCAAATGTTCTTGCAGGCAATCCTACAAGTTTATTTGAACTTCATCCTCTaGGCTGGTTTGATATCCGAG +
Preference number: 5 (lower is better)
Translates to: QTDLSGLQMFLQAILQVYLNFIL*AGLISE
Trigger: CTCGGATATCAAACCAGCCAAGAGGATGAAGTTCAA...ATAAACTTGTAGGATTGCCTGCAAGAACATTTGCAGGCCACTTAGATCTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS-3UTR CAA 90 bp CGATTTAACAATCTTGAAAAAGACTGGAAGGTGCTCTACAGAGTTGACATAAAAACAGCAGGATCATCTTaGGCAAGGAGGACACCCGCA +
Preference number: 5 (lower is better)
Translates to: RFNNLEKDWKVLYRVDIKTAGSS*ARRTPA
Trigger: TGCGGGTGTCCTCCTTGCCAAAGATGATCCTGCTGT...TTTTATGTCAACTCTGTAGAGCACCTTCCAGTCTTTTTCAAGATTGTTAAATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp CCCCTGCTCGGCGACCGTCGAGCCCATTGCGCCTCCTaGAGAGCTCCTCGCGGGGCCGCCCAGCGCGAAGGG +
Preference number: 6 (lower is better)
Translates to: PLLGDRRAHCAS*RAPRGAAQREG
Trigger: CCCTTCGCGCTGGGCGGCCCCGCGAGGAGCTCTGCAGGAGGCGCAATGGGCTCGACGGTCGCCGAGCAGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp GCAGCTCAGCCAGCGCCAGGGCGCCCGCCAGTAGGCTaGGCACAGCCAGCGCTTTCAGCGTGGCCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: AAQPAPGRPPVG*AQPALSAWPPA
Trigger: AGCAGGCGGCCACGCTGAAAGCGCTGGCTGTGCTCAGCCTACTGGCGGGCGCCCTGGCGCTGGCTGAGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GACCACGAACAGCGCCAGGAAAAGGATGCAGTGCACTaGGTGCGACCCCTTGGCGAGGCCCGGCGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: DHEQRQEKDAVH*VRPLGEARRWP
Trigger: GGGCCAGCGCCGGGCCTCGCCAAGGGGTCGCACCCAGTGCACTGCATCCTTTTCCTGGCGCTGTTCGTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GAGCAGGGCATTGGCACCGAGCGTCCTCCAGAGACGTaGGCGCTTGGCAGGGACCAAGGCGGCTGTGACCAG +
Preference number: 6 (lower is better)
Translates to: EQGIGTERPPET*ALGRDQGGCDQ
Trigger: CTGGTCACAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCTGGAGGACGCTCGGTGCCAATGCCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp AGAGACGTGGGCGCTTGGCAGGGACCAAGGCGGCTGTaGCCAGTAAGTGCGAGGCAGCCACCACCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: RDVGAWQGPRRL*PVSARQPPPAR
Trigger: TCGGGCTGGTGGTGGCTGCCTCGCACTTACTGGTCACAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp CCGCCTGTGCTGCCCAGAGGTAGTCCAGCCGTAGTCTaGCATCCACTTGCCTGGCGTGCAGGGCCAGCGTGC +
Preference number: 6 (lower is better)
Translates to: PPVLPRGSPAVV*HPLAWRAGPAC
Trigger: GCACGCTGGCCCTGCACGCCAGGCAAGTGGATGTCAGACTACGGCTGGACTACCTCTGGGCAGCACAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GTAAGTGCGAGGCAGCCACCACCAGCCCGAAGCCGATaGCCAGTAGGCTGCGCACGGGCAGCAAGGCATAGG +
Preference number: 6 (lower is better)
Translates to: VSARQPPPARSR*PVGCARAARHR
Trigger: CCTATGCCTTGCTGCCCGTGCGCAGCCTACTGGCCATCGGCTTCGGGCTGGTGGTGGCTGCCTCGCACTTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 90 bp AAGAGCAGGGCATTGGCACCGAGCGTCCTCCAGAGACGTGGGCGCTaGGCAGGGACCAAGGCGGCTGTGACCAGTAAGTGCGAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: KSRALAPSVLQRRGR*AGTKAAVTSKCEAA
Trigger: GGCTGCCTCGCACTTACTGGTCACAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCTGGAGGACGCTCGGTGCCAATGCCCTGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp TTGGTGACCACGAACAGCGCCAGGAAAAGGATGCAGTaGACTGGGTGCGACCCCTTGGCGAGGCCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: LVTTNSARKRMQ*TGCDPLARPGA
Trigger: AGCGCCGGGCCTCGCCAAGGGGTCGCACCCAGTGCACTGCATCCTTTTCCTGGCGCTGTTCGTGGTCACCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 72 bp GCATTGGCACCGAGCGTCCTCCAGAGACGTGGGCGCTaGGCAGGGACCAAGGCGGCTGTGACCAGTAAGTGC +
Preference number: 6 (lower is better)
Translates to: ALAPSVLQRRGR*AGTKAAVTSKC
Trigger: GCACTTACTGGTCACAGCCGCCTTGGTCCCTGCCAAGCGCCCACGTCTCTGGAGGACGCTCGGTGCCAATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 90 bp GCGCACGGGCAGCAAGGCATAGGACACGAAGGTGACCAAAAGGAGTaGCCAAACCCCCTGCTCGGCGACCGTCGAGCCCATTGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: AHGQQGIGHEGDQKE*PNPLLGDRRAHCAS
Trigger: GGAGGCGCAATGGGCTCGACGGTCGCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCACCTTCGTGTCCTATGCCTTGCTGCCCGTGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp GACACGAAGGTGACCAAAAGGAGTTGCCAAACCCCCTaGTCGGCGACCGTCGAGCCCATTGCGCCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: DTKVTKRSCQTP*SATVEPIAPPA
Trigger: TGCAGGAGGCGCAATGGGCTCGACGGTCGCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCACCTTCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp GCTGCAGCTGGGACACCTGCAGGGATCGGACATTGGTaGCCACGAACAGCGCCAGGAAAAGGATGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: AAAGTPAGIGHW*PRTAPGKGCSA
Trigger: TGCACTGCATCCTTTTCCTGGCGCTGTTCGTGGTCACCAATGTCCGATCCCTGCAGGTGTCCCAGCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp CGTAGTCCCCGTTCAAGCACGCGAGGGTCGTCTTTGTaGTGTGGACCTTCCCTGGTAAGCCAGCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: RSPRSSTRGSSL*CGPSLVSQQPP
Trigger: TGGAGGCTGCTGGCTTACCAGGGAAGGTCCACATCACAAAGACGACCCTCGCGTGCTTGAACGGGGACTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 72 bp ACCTGCTGCAGCTGGGACACCTGCAGGGATCGGACATaGGTGACCACGAACAGCGCCAGGAAAAGGATGCAG +
Preference number: 6 (lower is better)
Translates to: TCCSWDTCRDRT*VTTNSARKRMQ
Trigger: CTGCATCCTTTTCCTGGCGCTGTTCGTGGTCACCAATGTCCGATCCCTGCAGGTGTCCCAGCTGCAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 72 bp CAGCAAGGCATAGGACACGAAGGTGACCAAAAGGAGTaGCCAAACCCCCTGCTCGGCGACCGTCGAGCCCAT +
Preference number: 6 (lower is better)
Translates to: QQGIGHEGDQKE*PNPLLGDRRAH
Trigger: ATGGGCTCGACGGTCGCCGAGCAGGGGGTTTGGCAACTCCTTTTGGTCACCTTCGTGTCCTATGCCTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp GTCAGGCACCCTGGAAAACACTGGACCCGCGTGATGTaGAGGTACAGGGTACAGGCCACCAAGAAGCAGATG +
Preference number: 6 (lower is better)
Translates to: VRHPGKHWTRVM*RYRVQATKKQM
Trigger: CATCTGCTTCTTGGTGGCCTGTACCCTGTACCTGCACATCACGCGGGTCCAGTGTTTTCCAGGGTGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp CGAACGGTTTCTGAGCTTCTCCGAGGCTGTTCTCAATaGCCTCCGCTTGTCGTCATCCTCGCAGGTCATCAC +
Preference number: 6 (lower is better)
Translates to: RTVSELLRGCSQ*PPLVVILAGHH
Trigger: GTGATGACCTGCGAGGATGACGACAAGCGGAGGGCATTGAGAACAGCCTCGGAGAAGCTCAGAAACCGTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp AAGACCACTATGAACACACACAAGGCGGTGCGGATCTaGATCGTCAGGCACCCTGGAAAACACTGGACCCGC +
Preference number: 6 (lower is better)
Translates to: KTTMNTHKAVRI*IVRHPGKHWTR
Trigger: GCGGGTCCAGTGTTTTCCAGGGTGCCTGACGATCCAGATCCGCACCGCCTTGTGTGTGTTCATAGTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp ACTGGTAGTAGAGGTCCATGTTCCGGGGATTGGACATaGGGAAGTGCTGTGCGACGTGAGCTGGCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: TGSRGPCSGDWT*GSAVRRELAGD
Trigger: ATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAACATGGACCTCTACTACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp GTCCATGTTCCGGGGATTGGACATGAGGAAGTGCTGTaGGACGTGAGCTGGCAGGAGATTGAAGAGGATCCT +
Preference number: 6 (lower is better)
Translates to: VHVPGIGHEEVL*DVSWQEIEEDP
Trigger: AGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAACATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GTAAAGAAGTTCAGATCGGCCATCTCCAGCTCTGTCTaGCGGGCTTCGAGAAGGCGGCTGATGTACCTGTTG +
Preference number: 6 (lower is better)
Translates to: VKKFRSAISSSV*RASRRRLMYLL
Trigger: CAACAGGTACATCAGCCGCCTTCTCGAAGCCCGCCAGACAGAGCTGGAGATGGCCGATCTGAACTTCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp TTGCCCTTCACGCTGACTTTGCCTCTGCACACAAACTaGTATGAGCACCTCTTCAGCAGCCGGTGGACTTCC +
Preference number: 6 (lower is better)
Translates to: LPFTLTLPLHTN*YEHLFSSRWTS
Trigger: GGAAGTCCACCGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGGCAAAGTCAGCGTGAAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 72 bp GGCAGGAGATTGAAGAGGATCCTCTTGTTGTCCAGCTaGACTCTCTCCATGTCATCCCGTTCCTCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GRRLKRILLLSS*TLSMSSRSSSA
Trigger: GGCGGAGGAGGAACGGGATGACATGGAGAGAGTCAAGCTGGACAACAAGAGGATCCTCTTCAATCTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CAA 90 bp GTTCTCAATGCCCTCCGCTTGTCGTCATCCTCGCAGGTCATCACGTaGGAGAAGGGGATCTCAGCCTTGAACATTTTCCGGCAGTGCATG +
Preference number: 6 (lower is better)
Translates to: VLNALRLSSSSQVIT*EKGISALNIFRQCM
Trigger: CATGCACTGCCGGAAAATGTTCAAGGCTGAGATCCCCTTCTCCAACGTGATGACCTGCGAGGATGACGACAAGCGGAGGGCATTGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp TCATCTCCATGGCGACATTCCGGGGCAAGAGGCTCATaGGCAACCGTTCCTGCTTCTCATTCTCATCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPWRHSGARGS*ATVPASHSHPP
Trigger: TGGAGGATGAGAATGAGAAGCAGGAACGGTTGCTCATGAGCCTCTTGCCCCGGAATGTCGCCATGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp TTCCGGGGATTGGACATGAGGAAGTGCTGTGCGACGTaGGCTGGCAGGAGATTGAAGAGGATCCTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FRGLDMRKCCAT*AGRRLKRILLL
Trigger: CAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp CTTCACGCTGACTTTGCCTCTGCACACAAACTGGTATaGGCACCTCTTCAGCAGCCGGTGGACTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: LHADFASAHKLV*APLQQPVDFLS
Trigger: ACTGAGGAAGTCCACCGGCTGCTGAAGAGGTGCTCATACCAGTTTGTGTGCAGAGGCAAAGTCAGCGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GGGATTGGACATGAGGAAGTGCTGTGCGACGTGAGCTaGCAGGAGATTGAAGAGGATCCTCTTGTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: GIGHEEVLCDVS*QEIEEDPLVVQ
Trigger: CTGGACAACAAGAGGATCCTCTTCAATCTCCTGCCAGCTCACGTCGCACAGCACTTCCTCATGTCCAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp AGGGCGAGGACAACGGCGCTGGTGAAGTACTCGTCCTaGAGCTGGTGGTATTTTTGTTCTCGTTCGACATGT +
Preference number: 6 (lower is better)
Translates to: RARTTALVKYSS*SWWYFCSRSTC
Trigger: ACATGTCGAACGAGAACAAAAATACCACCAGCTTCAGGACGAGTACTTCACCAGCGCCGTTGTCCTCGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp CACAGCCTTGAGCTACCGAGTAGATTAAGACCACTATaGACACACACAAGGCGGTGCGGATCTGGATCGTCA +
Preference number: 6 (lower is better)
Translates to: HSLELPSRLRPL*THTRRCGSGSS
Trigger: TGACGATCCAGATCCGCACCGCCTTGTGTGTGTTCATAGTGGTCTTAATCTACTCGGTAGCTCAAGGCTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp GAAAGGTCCTGCCGTGGGAACTGTTTCCATCAGTCCTaGCTTCTAGAAAGTACGTTAGCATCTCTCCCTTGC +
Preference number: 6 (lower is better)
Translates to: ERSCRGNCFHQS*LLESTLASLPC
Trigger: GCAAGGGAGAGATGCTAACGTACTTTCTAGAAGGCAGGACTGATGGAAACAGTTCCCACGGCAGGACCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS GCA 72 bp CATAAGGACACATCCTTCGTTCCAAGCGAAAGGTCCTaGCGTGGGAACTGTTTCCATCAGTCCTGCCTTCTA +
Preference number: 6 (lower is better)
Translates to: HKDTSFVPSERS*RGNCFHQSCLL
Trigger: TAGAAGGCAGGACTGATGGAAACAGTTCCCACGGCAGGACCTTTCGCTTGGAACGAAGGATGTGTCCTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp CCTCTTGGCTGGTTTGATATCCGAGAGAATCAAGCCTaGGAATATCTTCCTCCGATGGGATGGCACAATAAA +
Preference number: 6 (lower is better)
Translates to: PLGWFDIRENQA*EYLPPMGWHNK
Trigger: TTTATTGTGCCATCCCATCGGAGGAAGATATTCCCAGGCTTGATTCTCTCGGATATCAAACCAGCCAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS TCA 72 bp CAACTCGGAGAACAAAGTCGTTGTAGGACTGGTAGTTaGTTTCATCCAGAACATCAAACATGTCGATGGCGA +
Preference number: 6 (lower is better)
Translates to: QLGEQSRCRTGS*FHPEHQTCRWR
Trigger: TCGCCATCGACATGTTTGATGTTCTGGATGAAATCAACTACCAGTCCTACAACGACTTTGTTCTCCGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5
CDS CCA 72 bp GAGAATCAAGCCTGGGAATATCTTCCTCCGATGGGATaGCACAATAAAGAAGGTCTCAATGTTGTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: ENQAWEYLPPMG*HNKEGLNVVSS
Trigger: AGAACTCACAACATTGAGACCTTCTTTATTGTGCCATCCCATCGGAGGAAGATATTCCCAGGCTTGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000020706.5