Pregenerated sensors for ADCK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046947Ensembl transcript IDs: ENSMUST00000051249.13, ENSMUST00000140364.8, ENSMUST00000145788.8, ENSMUST00000149304.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATTCACAACTGCCTATAACTCCAAAGGACACAATGGTCTCACCTaGCCTTCAGTAGGTATCTACATACACATAGATACAGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AFTTAYNSKGHNGLT*PSVGIYIHIDTGRQ Trigger: CTGCCTGCCTGTATCTATGTGTATGTAGATACCTACTGAAGGCCAGGTGAGACCATTGTGTCCTTTGGAGTTATAGGCAGTTGTGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR CCA 90 bp | GGATTAAACCTGGAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTaGAGCTATACCACCAGCCTCATTATTTTAACACTGAAAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: GLNLEPQTWWTKPPL*SYTTSLIILTLKNK Trigger: TTTATTTTTCAGTGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTCCAGGTTTAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCGGACCAAGGAAGGGTTaGAGAGATAGCTCAGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: EPQTWWTKPPLWSYTTSLGPRKG*RDSSVV Trigger: AACCACTGAGCTATCTCTTCAACCCTTCCTTGGTCC...GAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCGAAGAGATAGCTCAGTaGTTAGTAGCACTCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EPQTWWTKPPLWSYTTSLEEIAQ*LVALCC Trigger: GCAGCAGAGTGCTACTAACCACTGAGCTATCTCTTC...GAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACACTGGGAAAGCGGTGGTaGCTCTGCCACACATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WWTKPPLWSYTTSLIILTLGKRW*LCHTSS Trigger: ACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAG...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACAGCACTCTGCTGCTCTTaGGAGGACCTAAATTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: WWTKPPLWSYTTSLIILTALCCS*EDLNSF Trigger: AAATGAATTTAGGTCCTCTCAAGAGCAGCAGAGTGC...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACACCCTGTAGACTTAGTTaGCCTCAAACCCAAAGATCT | + |
|
Preference number: 2 (lower is better) Translates to: WWTKPPLWSYTTSLIILTPCRLS*PQTQRS Trigger: AGATCTTTGGGTTTGAGGCCAACTAAGTCTACAGGG...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR TCA 72 bp | GCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTaGCTCTGCCACACATCCAGTTTTAGGTGTCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ADPEAGSLGKRW*LCHTSSFRCLS Trigger: GCTAAGACACCTAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| 3UTR CCA 72 bp | AACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTaGGAAAGCGGTGGTGACTCTGCCACACATCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: NPVFKQTLKLAR*ESGGDSATHPV Trigger: AACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| 3UTR CCA 72 bp | CTGGAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTaGAGCTATACCACCAGCCTCATTATTTTAACACTG | + |
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Preference number: 3 (lower is better) Translates to: LEPQTWWTKPPL*SYTTSLIILTL Trigger: CAGTGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR TCA 72 bp | TTATGCCCTAAAATAACCCGGTTTTTAAGCAGACCCTaGAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LCPKITRFLSRP*SWLAGKAVVTL Trigger: CAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATTTTAGGGCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| 3UTR GCA 72 bp | CTGAGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTaGCACAGCCCCTCCTCCTACACAAGTACATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSPIPRNPCGSD*HSPSSYTSTCN Trigger: ATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| 3UTR TCA 72 bp | GCTGAACTGAAGGCATTCGATGCCAGGCTTAAGTCCTaGGTCCAATCCCTAGAAATCCCTGTGGTTCTGATT | + |
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Preference number: 3 (lower is better) Translates to: AELKAFDARLKS*VQSLEIPVVLI Trigger: AATCAGAACCACAGGGATTTCTAGGGATTGGACTCAGGACTTAAGCCTGGCATCGAATGCCTTCAGTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTCACGGCCCTGGTTCCTaGGGCAGAGAGCTCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATHGPGS*GRELPK Trigger: CTTGGGGAGCTCTCTGCCCCAGGAACCAGGGCCGTG...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGCATCACCACGGCCCTaGTTCCTGGGGCAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATASPRP*FLGQRA Trigger: AGCTCTCTGCCCCAGGAACCAGGGCCGTGGTGATGC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGCCCCTCCAGCACCATaGTGGCAACCACAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATAPPAP*WQPQWR Trigger: CCTCCATTGTGGTTGCCATCATGGTGCTGGAGGGGC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTACACGGCCCTGGTTCCTaGGGCAGAGAGCTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLHGPGS*GRELPK Trigger: CTTGGGGAGCTCTCTGCCCCAGGAACCAGGGCCGTG...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGGTACAGAAAGCCTCTaGAAAGAGGTCGCGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATGTESL*KEVAPG Trigger: ACCCGGCGCGACCTCTTTTCAGAGGCTTTCTGTACC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTAGATGCCAGGGAGCCTaGGACACACCCACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATRCQGA*DTPTSD Trigger: GTCAGAAGTGGGTGTGTCTCAGGCTCCCTGGCATCT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AACCTGGAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCTCATTGGCCTGGGCATaGTGCAGCATGAGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLEPQTWWTKPPLWSYTTSLAWA*CSMSSA Trigger: GGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGA...GGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTCCAGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACAGAGGTCGCGCCGGGTaGTGGCCCATTGGCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHRGRAG*WPIGPI Trigger: AATTGGGCCAATGGGCCAGCACCCGGCGCGACCTCT...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGTCCTTGCCCAAGGGTaGGGGGTCACCTGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLAAKGQTLRICLHCVHTVLAQG*GVTWTC Trigger: GCATGTCCAGGTGACCCCCCACCCTTGGGCAAGGAC...AGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAGTCCTTGCCCAAGGGTaGGGGGTCACCTGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLVLAQG*GVTWTC Trigger: GCATGTCCAGGTGACCCCCCACCCTTGGGCAAGGAC...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTCTAGGATGTCCAGCGTaGGGTCCAGTGAGCGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLAAKGQTLRICLHCVHTLGCPA*GPVSGR Trigger: TCGGCCGCTCACTGGACCCCACGCTGGACATCCTAG...AGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGCATCACCACGGCCCTaGTTCCTGGGGCAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGASPRP*FLGQRA Trigger: AGCTCTCTGCCCCAGGAACCAGGGCCGTGGTGATGC...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTACTCCATCAGCACCCTaGACCAGGATGTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATTPSAP*TRMFPG Trigger: CCCTGGAAACATCCTGGTCCAGGGTGCTGATGGAGT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACCTAGGATGTCCAGCGTaGGGTCCAGTGAGCGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYLGCPA*GPVSGR Trigger: TCGGCCGCTCACTGGACCCCACGCTGGACATCCTAG...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGGGCATGATGCAGCATaGGCTCAGCCACTCGATGGC | + |
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Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGGHDAA*AQPLDG Trigger: GCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCC...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGCCCCTCCAGCACCATaGTGGCAACCACAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGAPPAP*WQPQWR Trigger: CCTCCATTGTGGTTGCCATCATGGTGCTGGAGGGGC...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTAAATCCATGGACACCTaGGAGAGCAAGCCTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATKSMDT*ESKPGC Trigger: ACACCCAGGCTTGCTCTCTCAGGTGTCCATGGATTT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGGGGGCGCAGTGGGGTaGGAAATTTCACAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFGGAVG*EISQMP Trigger: TGGCATCTGTGAAATTTCCCACCCCACTGCGCCCCC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTATGTTCTTCCTGGCCTaGGTCACCAGTGTAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATMFFLA*VTSVAI Trigger: GATGGCTACACTGGTGACCCAGGCCAGGAAGAACAT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACGCCAGGTCACTCCAGTaGGTCTTTCTCTGGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHARSLQ*VFLWHK Trigger: CTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGGC...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AACCTGGAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCGTCGGCAAGGTTTTCTaGAGGCTTCCGGTCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: NLEPQTWWTKPPLWSYTTVGKVF*RLPVFH Trigger: ATGAAAGACCGGAAGCCTTCAGAAAACCTTGCCGAC...GGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTCCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTTCATTGGCCTGGGCATaGTGCAGCATGAGCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGSLAWA*CSMSSA Trigger: GGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGA...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACGGGGTCACCTGGACATaGAGCTTGGAGAACTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHGVTWT*SLENWV Trigger: TACCCAGTTCTCCAAGCTGCATGTCCAGGTGACCCC...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | GAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCAGAAGCCTGCAGTTTTaGCACAATGCCAGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: EPQTWWTKPPLWSYTTSLRSLQF*HNASIQ Trigger: TTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCT...GAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTAAAGCCCCAGGGCTTTaGTGCCAATCTTCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATKAPGL*CQSSSA Trigger: TGCTGATGAAGATTGGCAGCAAAGCCCTGGGGCTTT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACGATGAGGGGGCGCAGTaGGGTGGGAAATTTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHDEGAQ*GGKFHR Trigger: TCTGTGAAATTTCCCACCCCACTGCGCCCCCTCATC...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTACTCCATCAGCACCCTaGACCAGGATGTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFTPSAP*TRMFPG Trigger: CCCTGGAAACATCCTGGTCCAGGGTGCTGATGGAGT...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR TCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACGCCAGGTCACTCCAGTaGGTCTTTCTCTGGCACAAG | + |
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Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYARSLQ*VFLWHK Trigger: CTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGGC...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACGGGGTCACCTGGACATaGAGCTTGGAGAACTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYGVTWT*SLENWV Trigger: TACCCAGTTCTCCAAGCTGCATGTCCAGGTGACCCC...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAATAAAGGGCTCTCTCTaGATCACCACGGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLIKGSL*ITTALV Trigger: AACCAGGGCCGTGGTGATGCAGAGAGAGCCCTTTAT...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTAGAAGCCTGCAGTTTTaGCACAATGCCAGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATRSLQF*HNASIQ Trigger: TTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACGCCCCAGGGCTTTGCTaGCAATCTTCATCAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHAPGLC*QSSSAV Trigger: TACTGCTGATGAAGATTGGCAGCAAAGCCCTGGGGC...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
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| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTCTGGTAGCTGGACACTaGAACACTCTCTTCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATLVAGH*NTLFIR Trigger: ACGTATGAAGAGAGTGTTCCAGTGTCCAGCTACCAG...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTACTGCCTGCTGGTAGCTaGACACTGGAACACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLLPAGS*TLEHSL Trigger: AAGAGAGTGTTCCAGTGTCCAGCTACCAGCAGGCAG...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTCTGCCTGCTGGTAGCTaGACACTGGAACACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLAAKGQTLRICLHCVHTLPAGS*TLEHSL Trigger: AAGAGAGTGTTCCAGTGTCCAGCTACCAGCAGGCAG...AGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTTCCTCTTCAGATCGGTaGGAATTCCTGCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLAAKGQTLRICLHCVHTSSSDR*EFLPAG Trigger: ACCAGCAGGCAGGAATTCCCACCGATCTGAAGAGGA...AGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTCCTCTTCAGATCGGTaGGAATTCCTGCCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHSSSDR*EFLPAG Trigger: ACCAGCAGGCAGGAATTCCCACCGATCTGAAGAGGA...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACCATCCTTGCACTCATTaGCCTGGGCATGATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHHPCTH*PGHDAA Trigger: TGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATG...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACATGTTCTTCCTGGCCTaGGTCACCAGTGTAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHMFFLA*VTSVAI Trigger: GATGGCTACACTGGTGACCCAGGCCAGGAAGAACAT...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTACCCATTGGCCCAATTTaGTATATGTTGGGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLPIGPI*YMLGLR Trigger: CCTCAGGCCCAACATATATCAAATTGGGCCAATGGG...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGTCGGCAAGGTTTTCTaGAGGCTTCCGGTCTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFVGKVF*RLPVFH Trigger: ATGAAAGACCGGAAGCCTTCAGAAAACCTTGCCGAC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACATGATGCTGGCCCTTTaGAGAGGAAGGGTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHMMLAL*RGRVLL Trigger: CAGCAAAACCCTTCCTCTTCAAAGGGCCAGCATCAT...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTATACAGCCTGGAAAACTaGCCGGAAATTCCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLYSLEN*PEIPQV Trigger: GACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTA...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAACCTTTCCACATCCTTaGACTCATTGGCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLTFPHP*THWPGH Trigger: ATGCCCAGGCCAATGAGTGCAAGGATGTGGAAAGGT...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTAGCATCCCAGGGGTCTaGAATGCCCAAGTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGSIPGV*NAQVPF Trigger: GAAAGGAACTTGGGCATTCCAGACCCCTGGGATGCT...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTCATCCTTGCACTCATTaGCCTGGGCATGATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGHPCTH*PGHDAA Trigger: TGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATG...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACCGCAGGTCTGTCTGTTaGACCATGAGCTTCTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHRRSVC*TMSFSN Trigger: ATTCGAGAAGCTCATGGTCCAACAGACAGACCTGCG...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGCCCAAGTTCCTTTCTaGACTCAAAGCATCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATAQVPF*TQSILS Trigger: ACTTAAGATGCTTTGAGTTCAGAAAGGAACTTGGGC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACAGGGCATGATGCAGCATaGGCTCAGCCACTCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: WWTKPPLWSYTTSLIILTGHDAA*AQPLDG Trigger: GCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCC...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTCCCCCTCTCCAACACTaGCATGGGCTGAGATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGPPLQH*HGLRLI Trigger: AATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGG...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGTTGATCCCCAGCTGTaGAATCTTCCTCTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFVDPQL*NLPLQI Trigger: GATCTGAAGAGGAAGATTGCACAGCTGGGGATCAAC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAGCAGTTTTGCCACAATaGCAGCATCCAACAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLAVLPQ*QHPTTP Trigger: TGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGC...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACTACAGCCTGGAAAACTaGCCGGAAATTCCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYYSLEN*PEIPQV Trigger: GACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTA...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGGGCTGAGATTAATTTaGGCAAAGTACCTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAKGQTLRICLHCVHTATGLRLI*AKYLAE Trigger: TTCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTACGGGTGCTGGCCCATTaGCCCAATTTGATATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLRVLAH*PNLIYV Trigger: AACATATATCAAATTGGGCCAATGGGCCAGCACCCG...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTATGCAGCTTGGAGAACTaGGTACAGAAAGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLCSLEN*VQKASE Trigger: TTCAGAGGCTTTCTGTACCCAGTTCTCCAAGCTGCA...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTTGCAGCTTGGAGAACTaGGTACAGAAAGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFCSLEN*VQKASE Trigger: TTCAGAGGCTTTCTGTACCCAGTTCTCCAAGCTGCA...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTATCCCCAAATGCCTGCTaGAGTAAGTATTCCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLSPNAC*SKYSVL Trigger: AAGGACGGAATACTTACTCCAGCAGGCATTTGGGGA...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTTCCCCAAATGCCTGCTaGAGTAAGTATTCCGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLAAKGQTLRICLHCVHTSPNAC*SKYSVL Trigger: AAGGACGGAATACTTACTCCAGCAGGCATTTGGGGA...AGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAAACGCTTTGTACACTTaGGCCACACAACCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLARWESGGDSATHPVLNALYT*ATQPEP Trigger: AGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTT...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCCCTCCTCCTACACAAGTACATGCAATTTAAAAAGGAAGGAAGGGACGGGGGGCGCAGTGGGGTaGGAAATTTCACAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSPSSYTSTCNLKRKEGTGGAVG*EISQMP Trigger: TGGCATCTGTGAAATTTCCCACCCCACTGCGCCCCC...CGTCCCTTCCTTCCTTTTTAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTAGATGAGGGGGCGCAGTaGGGTGGGAAATTTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLDEGAQ*GGKFHR Trigger: TCTGTGAAATTTCCCACCCCACTGCGCCCCCTCATC...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCCCTCCCCACCAACAAAGAGAGGAAGTCGTTGGCTCTACAGCAGTCACTTCAGCAGTAAATCCATaGACACCTGAGAGAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPPHQQREEVVGSTAVTSAVNP*TPERAS Trigger: GCTTGCTCTCTCAGGTGTCCATGGATTTACTGCTGA...AGTGACTGCTGTAGAGCCAACGACTTCCTCTCTTTGTTGGTGGGGAGGGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGATATATGTTGGGCCTaGGGTCTCTGTAGCTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFDICWA*GLCSFE Trigger: TTCAAAGCTACAGAGACCTCAGGCCCAACATATATC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACAGGTACAGAAAGCCTCTaGAAAGAGGTCGCGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WWTKPPLWSYTTSLIILTGTESL*KEVAPG Trigger: ACCCGGCGCGACCTCTTTTCAGAGGCTTTCTGTACC...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACGGGAAATTTCACAGATaGCATGTCCTGGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSCQRADPEDLPSLCAHGKFHR*HVLEVV Trigger: CACAACTTCCAGGACATGGCATCTGTGAAATTTCCC...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACGTTGATCCCCAGCTGTaGAATCTTCCTCTTCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYVDPQL*NLPLQI Trigger: GATCTGAAGAGGAAGATTGCACAGCTGGGGATCAAC...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAATCCCTAGAAATCCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACCTGGTAGCTGGACACTaGAACACTCTCTTCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: SPIPRNPCGSDCHSPSSYLVAGH*NTLFIR Trigger: ACGTATGAAGAGAGTGTTCCAGTGTCCAGCTACCAG...GTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGGATTTCTAGGGATTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTACTGTCTGTTGGACCATaGGCTTCTCGAATTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLLSVGP*ASRIPP Trigger: TGGAGGAATTCGAGAAGCTCATGGTCCAACAGACAG...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGGGAAATTTCACAGATaGCATGTCCTGGAAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNPVFKQTLKLARWESGGGKFHR*HVLEVV Trigger: CACAACTTCCAGGACATGGCATCTGTGAAATTTCCC...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTAACCTTTCCACATCCTTaGACTCATTGGCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLTFPHP*THWPGH Trigger: ATGCCCAGGCCAATGAGTGCAAGGATGTGGAAAGGT...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCCCTCCTCCTACACAAGTACATGCAATTTAAAAAGGAAGGAAGGGACGAGCATCCCAGGGGTCTaGAATGCCCAAGTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSPSSYTSTCNLKRKEGTSIPGV*NAQVPF Trigger: GAAAGGAACTTGGGCATTCCAGACCCCTGGGATGCT...CGTCCCTTCCTTCCTTTTTAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGGGCTGAGATTAATTTaGGCAAAGTACCTAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPVPASLPLCPKITRFGLRLI*AKYLAE Trigger: TTCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCATTTCCCAGCATTCACAACTGCCTATAACTCCAAAGGACACAATGGTCAGATGCCAGGGAGCCTaGGACACACCCACTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KFISQHSQLPITPKDTMVRCQGA*DTPTSD Trigger: GTCAGAAGTGGGTGTGTCTCAGGCTCCCTGGCATCT...GACCATTGTGTCCTTTGGAGTTATAGGCAGTTGTGAATGCTGGGAAATGAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTAGCCCAAGTTCCTTTCTaGACTCAAAGCATCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLAQVPF*TQSILS Trigger: ACTTAAGATGCTTTGAGTTCAGAAAGGAACTTGGGC...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACAGCAGTTTTGCCACAATaGCAGCATCCAACAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: WWTKPPLWSYTTSLIILTAVLPQ*QHPTTP Trigger: TGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGC...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCAGCCTCATTATTTTAACAAACGCTTTGTACACTTaGGCCACACAACCTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: WWTKPPLWSYTTSLIILTNALYT*ATQPEP Trigger: AGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTT...TGTTAAAATAATGAGGCTGGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| 3UTR CAA 72 bp | AGAGATAGCTCAGTGGTTAGTAGCACTCTGCTGCTCTaGAGAGGACCTAAATTCATTTCCCAGCATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RDSSVVSSTLLL*RGPKFISQHSQ Trigger: TTGTGAATGCTGGGAAATGAATTTAGGTCCTCTCAAGAGCAGCAGAGTGCTACTAACCACTGAGCTATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | TGTCCAGCGTGGGGTCCAGTGAGCGGCCGAGCCCCTCCAGCACCATaGTGGCAACCACAATGGAGGCGAAGTTGCTCTCCAGCTTTACCT | + |
|
Preference number: 5 (lower is better) Translates to: CPAWGPVSGRAPPAP*WQPQWRRSCSPALP Trigger: AGGTAAAGCTGGAGAGCAACTTCGCCTCCATTGTGGTTGCCATCATGGTGCTGGAGGGGCTCGGCCGCTCACTGGACCCCACGCTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | AGCCCTAGGCGGAGACACAGTAAGACGCGGGCCAGAGGCCCTTCTTaGGCCACCTTCTCCACTAGTCCATTTTCCGCCAGGTCACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRRRHSKTRARGPS*ATFSTSPFSARSLQ Trigger: CTGGAGTGACCTGGCGGAAAATGGACTAGTGGAGAAGGTGGCCCAAGAAGGGCCTCTGGCCCGCGTCTTACTGTGTCTCCGCCTAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | CTGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTTGCCACAATaGCAGCATCCAACAACACCAGGCGCAGTGGGCACAGGGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGNSSGQKPAVLPQ*QHPTTPGAVGTGQA Trigger: CGCCTGCCCTGTGCCCACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS TCA 90 bp | TGGGCCACCTTCTCCACTAGTCCATTTTCCGCCAGGTCACTCCAGTaGGTCTTTCTCTGGCACAAGCTGCCAGGCGCCCCCTCTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: WATFSTSPFSARSLQ*VFLWHKLPGAPSPT Trigger: TGTTGGAGAGGGGGCGCCTGGCAGCTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGGCGGAAAATGGACTAGTGGAGAAGGTGGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | CTGCAGTTTTGCCACAATGCCAGCATCCAACAACACCAGGCGCAGTaGGCACAGGGCAGGCGCTATGGTAGCCACCAGTGTGTCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQFCHNASIQQHQAQ*AQGRRYGSHQCVTD Trigger: GTCTGTGACACACTGGTGGCTACCATAGCGCCTGCCCTGTGCCCACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTATTCACCTGCTGCTGTaGCATCTCCAGGCTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAKGQTLRICLHCVHTATIHLLL*HLQAWG Trigger: TCCCCAAGCCTGGAGATGCAACAGCAGCAGGTGAAT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | AAAGCAGATGGAGCCAGAGGGTGGAGAGGCCAGGGGCCAAGTAGGTaGGAGGGTACAAGAAGAGGAGGGGGAAGAATTTCGCCAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KADGARGWRGQGPSR*EGTRRGGGRISPRA Trigger: TGCTCTTGGCGAAATTCTTCCCCCTCCTCTTCTTGTACCCTCTCACCTACTTGGCCCCTGGCCTCTCCACCCTCTGGCTCCATCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | GGTCACCTGGACATGCAGCTTGGAGAACTGGGTACAGAAAGCCTCTaGAAAGAGGTCGCGCCGGGTGCTGGCCCATTGGCCCAATTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHLDMQLGELGTESL*KEVAPGAGPLAQFD Trigger: ATCAAATTGGGCCAATGGGCCAGCACCCGGCGCGACCTCTTTTCAGAGGCTTTCTGTACCCAGTTCTCCAAGCTGCATGTCCAGGTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | ACCTTTCCACATCCTTGCACTCATTGGCCTGGGCATGATGCAGCATaGGCTCAGCCACTCGATGGCCCTGTCCCATCACTACAGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TFPHPCTHWPGHDAA*AQPLDGPVPSLQPG Trigger: TCCAGGCTGTAGTGATGGGACAGGGCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATGTGGAAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTCCGGGTGCTGGCCCATaGGCCCAATTTGATATATGT | + |
|
Preference number: 5 (lower is better) Translates to: AAKGQTLRICLHCVHTATPGAGP*AQFDIC Trigger: ACATATATCAAATTGGGCCAATGGGCCAGCACCCGG...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTCAGAAGCCTGCAGTTTaGCCACAATGCCAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAKGQTLRICLHCVHTATQKPAV*PQCQHP Trigger: TGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTG...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | GCGCCGGGTGCTGGCCCATTGGCCCAATTTGATATATGTTGGGCCTaGGGTCTCTGTAGCTTTGAAAAGCAGATGGAGCCAGAGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APGAGPLAQFDICWA*GLCSFEKQMEPEGG Trigger: TCCACCCTCTGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATGGGCCAGCACCCGGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | TCAGCCTTGAACCTTTCCACATCCTTGCACTCATTGGCCTGGGCATaGTGCAGCATGAGCTCAGCCACTCGATGGCCCTGTCCCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: SALNLSTSLHSLAWA*CSMSSATRWPCPIT Trigger: AGTGATGGGACAGGGCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATGTGGAAAGGTTCAAGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | CATTTTCCGCCAGGTCACTCCAGTGAGTCTTTCTCTGGCACAAGCTaGCAGGCGCCCCCTCTCCAACACTGCCATGGGCTGAGATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: HFPPGHSSESFSGTS*QAPPLQHCHGLRLI Trigger: AATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGGCGCCTGGCAGCTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGGCGGAAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | CACAACCTGAACCTACAGGTTCCCGGGTCTCGAAAAAGAGGAGGCTaGCCCAATCCTCCCCAAATGCCTGCTGGAGTAAGTATTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HNLNLQVPGSRKRGG*PNPPQMPAGVSIPS Trigger: GGACGGAATACTTACTCCAGCAGGCATTTGGGGAGGATTGGGGCAGCCTCCTCTTTTTCGAGACCCGGGAACCTGTAGGTTCAGGTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | CTGGAAAACTGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTTaGCACAATGCCAGCATCCAACAACACCAGGCGCAGTGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LENCPEIPQVRSLQF*HNASIQQHQAQWAQ Trigger: CTGTGCCCACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CCA 90 bp | TCCCCAAATGCCTGCTGGAGTAAGTATTCCGTCCTTGCCCAAGGGTaGGGGGTCACCTGGACATGCAGCTTGGAGAACTGGGTACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPNACWSKYSVLAQG*GVTWTCSLENWVQK Trigger: TTTCTGTACCCAGTTCTCCAAGCTGCATGTCCAGGTGACCCCCCACCCTTGGGCAAGGACGGAATACTTACTCCAGCAGGCATTTGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTGCCCATTGGCCCAATTaGATATATGTTGGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAKGQTLRICLHCVHTATAHWPN*IYVGPE Trigger: CTCAGGCCCAACATATATCAAATTGGGCCAATGGGC...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTATTCACCTGCTGCTGTaGCATCTCCAGGCTTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLAPVPASLPLCPKITRFIHLLL*HLQAWG Trigger: TCCCCAAGCCTGGAGATGCAACAGCAGCAGGTGAAT...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAGCGCAGGTCTGTCTGTaGGACCATGAGCTTCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LKLARWESGGDSATHPVLAQVCL*DHELLE Trigger: TTCGAGAAGCTCATGGTCCAACAGACAGACCTGCGC...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | CTCAGCCACTCGATGGCCCTGTCCCATCACTACAGCCTGGAAAACTaGCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTTGCCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHSMALSHHYSLEN*PEIPQVRSLQFCHN Trigger: ATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTAGTGATGGGACAGGGCCATCGAGTGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | AGCATGAGCTCAGCCACTCGATGGCCCTGTCCCATCACTACAGCCTaGAAAACTGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SMSSATRWPCPITTA*KTARKFLRSEACSF Trigger: AAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTAGTGATGGGACAGGGCCATCGAGTGGCTGAGCTCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | AACCTGGAGCCGCAGACCTGGTGGACTAAGCCTCCACTGTGGAGCTATACCACCACAATGGAGGCGAAGTaGCTCTCCAGCTTTACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: NLEPQTWWTKPPLWSYTTTMEAK*LSSFTL Trigger: TAAGGTAAAGCTGGAGAGCAACTTCGCCTCCATTGT...GGTGGTATAGCTCCACAGTGGAGGCTTAGTCCACCAGGTCTGCGGCTCCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACTGCCACTAATGATGCTGGCCCTTaGAAGAGGAAGGGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAKGQTLRICLHCVHTATNDAGP*KRKGFA Trigger: AGCAAAACCCTTCCTCTTCAAAGGGCCAGCATCATT...AGTGGCAGTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTAAAAGCCCCAGGGCTTaGCTGCCAATCTTCATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLAPVPASLPLCPKITRFKSPRA*LPIFIS Trigger: GCTGATGAAGATTGGCAGCAAAGCCCTGGGGCTTTT...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | CAAGGAAATACTAGCGAACGCTTTGTACACTTGGGCCACACAACCTaGACCTACAGGTTCCCGGGTCTCGAAAAAGAGGAGGCTGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QGNTSERFVHLGHTT*TYRFPGLEKEEAAP Trigger: TGGGGCAGCCTCCTCTTTTTCGAGACCCGGGAACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGTATTTCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 90 bp | ACTACAGCCTGGAAAACTGCCCGGAAATTCCTCAGGTCAGAAGCCTaGAGTTTTGCCACAATGCCAGCATCCAACAACACCAGGCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTAWKTARKFLRSEA*SFATMPASNNTRRS Trigger: ACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CCA 90 bp | GTACAGAAAGCCTCTGAAAAGAGGTCGCGCCGGGTGCTGGCCCATTaGCCCAATTTGATATATGTTGGGCCTGAGGTCTCTGTAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQKASEKRSRRVLAH*PNLIYVGPEVSVAL Trigger: CAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATGGGCCAGCACCCGGCGCGACCTCTTTTCAGAGGCTTTCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | TGCTGCTGTTGCATCTCCAGGCTTGGGGACACTCCATCAGCACCCTaGACCAGGATGTTTCCAGGGTGTAGATCTCCGTGTACAAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCISRLGDTPSAP*TRMFPGCRSPCTKL Trigger: TAACTTTGTACACGGAGATCTACACCCTGGAAACATCCTGGTCCAGGGTGCTGATGGAGTGTCCCCAAGCCTGGAGATGCAACAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGCACCAGTTCCAGCGTCCCTCCCTTTATGCCCTAAAATAACCCGGTTTGAGGTCTCTGTAGCTTaGAAAAGCAGATGGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLAPVPASLPLCPKITRFEVSVA*KSRWSQ Trigger: CTGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTC...AAACCGGGTTATTTTAGGGCATAAAGGGAGGGACGCTGGAACTGGTGCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGACTCTGCCACACATCCAGTTTTAGCCCATTGGCCCAATTaGATATATGTTGGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKLARWESGGDSATHPVLAHWPN*IYVGPE Trigger: CTCAGGCCCAACATATATCAAATTGGGCCAATGGGC...TAAAACTGGATGTGTGGCAGAGTCACCACCGCTTTCCCAGCGAGCCAGCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | AATAACCCGGTTTTTAAGCAGACCCTGAAGCTGGCTCGCTGGGAAAGCGGTGGTGGCAAGCTAAGCCATTaGACTCCAGGTAAAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NNPVFKQTLKLARWESGGGKLSH*TPGKSP Trigger: GGGGCTTTTACCTGGAGTCAAATGGCTTAGCTTGCC...ACCACCGCTTTCCCAGCGAGCCAGCTTCAGGGTCTGCTTAAAAACCGGGTTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | TTTCTCTGGCACAAGCTGCCAGGCGCCCCCTCTCCAACACTGCCATaGGCTGAGATTAATTTGGGCAAAGTACCTAGCAGAAACCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: FLWHKLPGAPSPTLP*AEINLGKVPSRNQH Trigger: ATGTTGGTTTCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGGCGCCTGGCAGCTTGTGCCAGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACACAATGGAGGCGAAGTaGCTCTCCAGCTTTACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CLSCQRADPEDLPSLCAHTMEAK*LSSFTL Trigger: TAAGGTAAAGCTGGAGAGCAACTTCGCCTCCATTGT...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTAGCTGCCAAAGGGCAGACCCTGAGGATCTGCCTTCACTGTGTGCACACAATGATGCTGGCCCTTaGAAGAGGAAGGGTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLSCQRADPEDLPSLCAHNDAGP*KRKGFA Trigger: AGCAAAACCCTTCCTCTTCAAAGGGCCAGCATCATT...GTGTGCACACAGTGAAGGCAGATCCTCAGGGTCTGCCCTTTGGCAGCTAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | TTCATACGTTTCCACCAGAATATCCCTAGTGATGAGGGGGCGCAGTaGGGTGGGAAATTTCACAGATGCCATGTCCTGGAAGTTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIRFHQNIPSDEGAQ*GGKFHRCHVLEVVL Trigger: CAGCACAACTTCCAGGACATGGCATCTGTGAAATTTCCCACCCCACTGCGCCCCCTCATCACTAGGGATATTCTGGTGGAAACGTATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTACAGAAGCCTGCAGTTTaGCCACAATGCCAGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLQKPAV*PQCQHP Trigger: TGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTG...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | CTGTCTTCCTCCAACAAGGAAATACTAGCGAACGCTTTGTACACTTaGGCCACACAACCTGAACCTACAGGTTCCCGGGTCTCGAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSNKEILANALYT*ATQPEPTGSRVSKK Trigger: CTTTTTCGAGACCCGGGAACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGTATTTCCTTGTTGGAGGAAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 90 bp | CCTCTTCAGATCGGTGGGAATTCCTGCCTGCTGGTAGCTGGACACTaGAACACTCTCTTCATACGTTTCCACCAGAATATCCCTAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PLQIGGNSCLLVAGH*NTLFIRFHQNIPSD Trigger: ATCACTAGGGATATTCTGGTGGAAACGTATGAAGAGAGTGTTCCAGTGTCCAGCTACCAGCAGGCAGGAATTCCCACCGATCTGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
||
| CDS CCA 90 bp | AAAGCCCCAGGGCTTTGCTGCCAATCTTCATCAGCAGTAAATCCATaGACACCTGAGAGAGCAAGCCTGGGTGTAATACTTTCACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAPGLCCQSSSAVNP*TPERASLGVILSLP Trigger: TGGCAGTGAAAGTATTACACCCAGGCTTGCTCTCTCAGGTGTCCATGGATTTACTGCTGATGAAGATTGGCAGCAAAGCCCTGGGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGGTTCTGATTGCCACAGCCCCTCCTCCTACACAAGTACATGCAATTTAGAGGTCTCTGTAGCTTaGAAAAGCAGATGGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCGSDCHSPSSYTSTCNLEVSVA*KSRWSQ Trigger: CTGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTC...TAAATTGCATGTACTTGTGTAGGAGGAGGGGCTGTGGCAATCAGAACCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS TCA 90 bp | CTCCGTGTACAAAGTTATCCACAAATATCATCTTCAAAAGCATGTTaGTCCCCAGCTGTGCAATCTTCCTCTTCAGATCGGTGGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LRVQSYPQISSSKAC*SPAVQSSSSDRWEF Trigger: GAATTCCCACCGATCTGAAGAGGAAGATTGCACAGCTGGGGATCAACATGCTTTTGAAGATGATATTTGTGGATAACTTTGTACACGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CCA 72 bp | AGAGGAAGGGTTTTGCTGCCTCTAGGATGTCCAGCGTaGGGTCCAGTGAGCGGCCGAGCCCCTCCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RGRVLLPLGCPA*GPVSGRAPPAP Trigger: TGGTGCTGGAGGGGCTCGGCCGCTCACTGGACCCCACGCTGGACATCCTAGAGGCAGCAAAACCCTTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | CCAGGTCACTCCAGTGAGTCTTTCTCTGGCACAAGCTaGCAGGCGCCCCCTCTCCAACACTGCCATGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGHSSESFSGTS*QAPPLQHCHGL Trigger: CAGCCCATGGCAGTGTTGGAGAGGGGGCGCCTGGCAGCTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | CGGAGACACAGTAAGACGCGGGCCAGAGGCCCTTCTTaGGCCACCTTCTCCACTAGTCCATTTTCCGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRHSKTRARGPS*ATFSTSPFSAR Trigger: CCTGGCGGAAAATGGACTAGTGGAGAAGGTGGCCCAAGAAGGGCCTCTGGCCCGCGTCTTACTGTGTCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | AAAGGGCTCTCTCTGCATCACCACGGCCCTGGTTCCTaGGGCAGAGAGCTCCCCAAGTCTCCAGATCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KGLSLHHHGPGS*GRELPKSPDPV Trigger: GACAGGATCTGGAGACTTGGGGAGCTCTCTGCCCCAGGAACCAGGGCCGTGGTGATGCAGAGAGAGCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | GCCTGCTGGAGTAAGTATTCCGTCCTTGCCCAAGGGTaGGGGGTCACCTGGACATGCAGCTTGGAGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: ACWSKYSVLAQG*GVTWTCSLENW Trigger: CCAGTTCTCCAAGCTGCATGTCCAGGTGACCCCCCACCCTTGGGCAAGGACGGAATACTTACTCCAGCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | AAGAGGAGGCTGCCCCAATCCTCCCCAAATGCCTGCTaGAGTAAGTATTCCGTCCTTGCCCAAGGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KRRLPQSSPNAC*SKYSVLAQGWG Trigger: CCCCCACCCTTGGGCAAGGACGGAATACTTACTCCAGCAGGCATTTGGGGAGGATTGGGGCAGCCTCCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 72 bp | TTCTCCACTAGTCCATTTTCCGCCAGGTCACTCCAGTaGGTCTTTCTCTGGCACAAGCTGCCAGGCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FSTSPFSARSLQ*VFLWHKLPGAP Trigger: GGGGGCGCCTGGCAGCTTGTGCCAGAGAAAGACTCACTGGAGTGACCTGGCGGAAAATGGACTAGTGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 72 bp | CATCCTTGCACTCATTGGCCTGGGCATGATGCAGCATaGGCTCAGCCACTCGATGGCCCTGTCCCATCACTA | + |
|
Preference number: 6 (lower is better) Translates to: HPCTHWPGHDAA*AQPLDGPVPSL Trigger: TAGTGATGGGACAGGGCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | GCCTCTGAAAAGAGGTCGCGCCGGGTGCTGGCCCATTaGCCCAATTTGATATATGTTGGGCCTGAGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASEKRSRRVLAH*PNLIYVGPEVS Trigger: AGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATGGGCCAGCACCCGGCGCGACCTCTTTTCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | TGCATCTCCAGGCTTGGGGACACTCCATCAGCACCCTaGACCAGGATGTTTCCAGGGTGTAGATCTCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CISRLGDTPSAP*TRMFPGCRSPC Trigger: ACACGGAGATCTACACCCTGGAAACATCCTGGTCCAGGGTGCTGATGGAGTGTCCCCAAGCCTGGAGATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CAA 72 bp | AGCCACCAGTGTGTCACAGACATTCACCTGCTGCTGTaGCATCTCCAGGCTTGGGGACACTCCATCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SHQCVTDIHLLL*HLQAWGHSIST Trigger: GGTGCTGATGGAGTGTCCCCAAGCCTGGAGATGCAACAGCAGCAGGTGAATGTCTGTGACACACTGGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CAA 90 bp | CCTGGAAAACTGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTaGCCACAATGCCAGCATCCAACAACACCAGGCGCAGTGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PGKLPGNSSGQKPAV*PQCQHPTTPGAVGT Trigger: TGTGCCCACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS TCA 72 bp | AACCTTTCCACATCCTTGCACTCATTGGCCTGGGCATaGTGCAGCATGAGCTCAGCCACTCGATGGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NLSTSLHSLAWA*CSMSSATRWPC Trigger: ACAGGGCCATCGAGTGGCTGAGCTCATGCTGCATCATGCCCAGGCCAATGAGTGCAAGGATGTGGAAAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | TCTGGCACAAGCTGCCAGGCGCCCCCTCTCCAACACTaGCATGGGCTGAGATTAATTTGGGCAAAGTACCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGTSCQAPPLQH*HGLRLIWAKYL Trigger: TAGGTACTTTGCCCAAATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGGCGCCTGGCAGCTTGTGCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | AACCTACAGGTTCCCGGGTCTCGAAAAAGAGGAGGCTaGCCCAATCCTCCCCAAATGCCTGCTGGAGTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLQVPGSRKRGG*PNPPQMPAGVS Trigger: ACTTACTCCAGCAGGCATTTGGGGAGGATTGGGGCAGCCTCCTCTTTTTCGAGACCCGGGAACCTGTAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | TGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTTaGCACAATGCCAGCATCCAACAACACCAGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CPEIPQVRSLQF*HNASIQQHQAQ Trigger: CTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CCA 72 bp | CACAAGCTGCCAGGCGCCCCCTCTCCAACACTGCCATaGGCTGAGATTAATTTGGGCAAAGTACCTAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HKLPGAPSPTLP*AEINLGKVPSR Trigger: TCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGGCGCCTGGCAGCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 72 bp | CTGCCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTTaGCCACAATGCCAGCATCCAACAACACCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGNSSGQKPAV*PQCQHPTTPGA Trigger: TGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CAA 72 bp | TTCCTGGCCTGGGTCACCAGTGTAGCCATCTCAGCCTaGAACCTTTCCACATCCTTGCACTCATTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLAWVTSVAISA*NLSTSLHSLAW Trigger: CCAGGCCAATGAGTGCAAGGATGTGGAAAGGTTCAAGGCTGAGATGGCTACACTGGTGACCCAGGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | ATGGTAGCCACCAGTGTGTCACAGACATTCACCTGCTaGTGTTGCATCTCCAGGCTTGGGGACACTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MVATSVSQTFTC*CCISRLGDTPS Trigger: TGATGGAGTGTCCCCAAGCCTGGAGATGCAACAGCAGCAGGTGAATGTCTGTGACACACTGGTGGCTACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS GCA 72 bp | AATTCCTCAGGTCAGAAGCCTGCAGTTTTGCCACAATaGCAGCATCCAACAACACCAGGCGCAGTGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: NSSGQKPAVLPQ*QHPTTPGAVGT Trigger: TGTGCCCACTGCGCCTGGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS GCA 72 bp | TCGATGGCCCTGTCCCATCACTACAGCCTGGAAAACTaGCCGGAAATTCCTCAGGTCAGAAGCCTGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SMALSHHYSLEN*PEIPQVRSLQF Trigger: AAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCAGGCTGTAGTGATGGGACAGGGCCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 90 bp | CATTGGCCCAATTTGATATATGTTGGGCCTGAGGTCTCTGTAGCTTaGAAAAGCAGATGGAGCCAGAGGGTGGAGAGGCCAGGGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HWPNLIYVGPEVSVA*KSRWSQRVERPGAK Trigger: CTTGGCCCCTGGCCTCTCCACCCTCTGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 90 bp | GCCTCTGAAAAGAGGTCGCGCCGGGTGCTGGCCCATTGGCCCAATTaGATATATGTTGGGCCTGAGGTCTCTGTAGCTTTGAAAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASEKRSRRVLAHWPN*IYVGPEVSVALKSR Trigger: TCTGCTTTTCAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATGGGCCAGCACCCGGCGCGACCTCTTTTCAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 72 bp | ACTAGCGAACGCTTTGTACACTTGGGCCACACAACCTaGACCTACAGGTTCCCGGGTCTCGAAAAAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSERFVHLGHTT*TYRFPGLEKEE Trigger: CTCCTCTTTTTCGAGACCCGGGAACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS TCA 72 bp | TCTGAGCTTCATAGCGCAGGTCTGTCTGTTGGACCATaGGCTTCTCGAATTCCTCCACGATCTCAGGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SELHSAGLSVGP*ASRIPPRSQAS Trigger: GCTTGCCTGAGATCGTGGAGGAATTCGAGAAGCTCATGGTCCAACAGACAGACCTGCGCTATGAAGCTCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
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| CDS CCA 72 bp | TTCCACCAGAATATCCCTAGTGATGAGGGGGCGCAGTaGGGTGGGAAATTTCACAGATGCCATGTCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FHQNIPSDEGAQ*GGKFHRCHVLE Trigger: TTCCAGGACATGGCATCTGTGAAATTTCCCACCCCACTGCGCCCCCTCATCACTAGGGATATTCTGGTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
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| CDS CAA 72 bp | GGCAAAGTACCTAGCAGAAACCAACATAGTCTGGCATaGCGAGAGCATCCCAGGGGTCTGGAATGCCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GKVPSRNQHSLA*REHPRGLECPS Trigger: ACTTGGGCATTCCAGACCCCTGGGATGCTCTCGCAATGCCAGACTATGTTGGTTTCTGCTAGGTACTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 72 bp | TCGAATTCCTCCACGATCTCAGGCAAGCTAAGCCATTaGACTCCAGGTAAAAGCCCCAGGGCTTTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SNSSTISGKLSH*TPGKSPRALLP Trigger: TGGCAGCAAAGCCCTGGGGCTTTTACCTGGAGTCAAATGGCTTAGCTTGCCTGAGATCGTGGAGGAATTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
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| CDS CAA 90 bp | CTCCAGATCCTGTCTTCCTCCAACAAGGAAATACTAGCGAACGCTTaGTACACTTGGGCCACACAACCTGAACCTACAGGTTCCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQILSSSNKEILANA*YTWATQPEPTGSRV Trigger: GACCCGGGAACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGTATTTCCTTGTTGGAGGAAGACAGGATCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 90 bp | CCGAGCCCCTCCAGCACCATGATGGCAACCACAATGGAGGCGAAGTaGCTCTCCAGCTTTACCTTATGGGTCATCAGTAGCTTAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: PSPSSTMMATTMEAK*LSSFTLWVISSLKT Trigger: TGTCTTTAAGCTACTGATGACCCATAAGGTAAAGCTGGAGAGCAACTTCGCCTCCATTGTGGTTGCCATCATGGTGCTGGAGGGGCTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS GCA 72 bp | GCAAAGTACCTAGCAGAAACCAACATAGTCTGGCATTaGGAGAGCATCCCAGGGGTCTGGAATGCCCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: AKYLAETNIVWH*ESIPGVWNAQV Trigger: AACTTGGGCATTCCAGACCCCTGGGATGCTCTCGCAATGCCAGACTATGTTGGTTTCTGCTAGGTACTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS GCA 72 bp | TGGAAAACTGCCCGGAAATTCCTCAGGTCAGAAGCCTaGAGTTTTGCCACAATGCCAGCATCCAACAACACC | + |
|
Preference number: 6 (lower is better) Translates to: WKTARKFLRSEA*SFATMPASNNT Trigger: GGTGTTGTTGGATGCTGGCATTGTGGCAAAACTGCAGGCTTCTGACCTGAGGAATTTCCGGGCAGTTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
||
| CDS CCA 72 bp | TCCAACAAGGAAATACTAGCGAACGCTTTGTACACTTaGGCCACACAACCTGAACCTACAGGTTCCCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SNKEILANALYT*ATQPEPTGSRV Trigger: GACCCGGGAACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGTATTTCCTTGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | TCTTCAGATCGGTGGGAATTCCTGCCTGCTGGTAGCTaGACACTGGAACACTCTCTTCATACGTTTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSDRWEFLPAGS*TLEHSLHTFPP Trigger: TGGTGGAAACGTATGAAGAGAGTGTTCCAGTGTCCAGCTACCAGCAGGCAGGAATTCCCACCGATCTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
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| CDS CAA 72 bp | TCCAGCACCATGATGGCAACCACAATGGAGGCGAAGTaGCTCTCCAGCTTTACCTTATGGGTCATCAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTMMATTMEAK*LSSFTLWVISS Trigger: GCTACTGATGACCCATAAGGTAAAGCTGGAGAGCAACTTCGCCTCCATTGTGGTTGCCATCATGGTGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS CAA 90 bp | ATGAGCTTCTCGAATTCCTCCACGATCTCAGGCAAGCTAAGCCATTaGACTCCAGGTAAAAGCCCCAGGGCTTTGCTGCCAATCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: MSFSNSSTISGKLSH*TPGKSPRALLPIFI Trigger: GATGAAGATTGGCAGCAAAGCCCTGGGGCTTTTACCTGGAGTCAAATGGCTTAGCTTGCCTGAGATCGTGGAGGAATTCGAGAAGCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
||
| CDS TCA 72 bp | AGCATCCCAGGGGTCTGGAATGCCCAAGTTCCTTTCTaGACTCAAAGCATCTTAAGTGTGACAAGCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SIPGVWNAQVPF*TQSILSVTSRP Trigger: GGGTCTGCTTGTCACACTTAAGATGCTTTGAGTTCAGAAAGGAACTTGGGCATTCCAGACCCCTGGGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS TCA 72 bp | GCTGGCCCATTGGCCCAATTTGATATATGTTGGGCCTaGGGTCTCTGTAGCTTTGAAAAGCAGATGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPLAQFDICWA*GLCSFEKQMEP Trigger: TGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATTGGGCCAATGGGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | CCCCCTCTCCAACACTGCCATGGGCTGAGATTAATTTaGGCAAAGTACCTAGCAGAAACCAACATAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPLQHCHGLRLI*AKYLAETNIVW Trigger: CCAGACTATGTTGGTTTCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | ATCGGTGGGAATTCCTGCCTGCTGGTAGCTGGACACTaGAACACTCTCTTCATACGTTTCCACCAGAATATC | + |
|
Preference number: 6 (lower is better) Translates to: IGGNSCLLVAGH*NTLFIRFHQNI Trigger: GATATTCTGGTGGAAACGTATGAAGAGAGTGTTCCAGTGTCCAGCTACCAGCAGGCAGGAATTCCCACCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 ENSMUST00000149304.2 |
||
| CDS CAA 72 bp | GCCCCCTCTCCAACACTGCCATGGGCTGAGATTAATTaGGGCAAAGTACCTAGCAGAAACCAACATAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: APSPTLPWAEIN*GKVPSRNQHSL Trigger: CAGACTATGTTGGTTTCTGCTAGGTACTTTGCCCAAATTAATCTCAGCCCATGGCAGTGTTGGAGAGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CCA 72 bp | GGGCTTTGCTGCCAATCTTCATCAGCAGTAAATCCATaGACACCTGAGAGAGCAAGCCTGGGTGTAATACTT | + |
|
Preference number: 6 (lower is better) Translates to: GLCCQSSSAVNP*TPERASLGVIL Trigger: AAGTATTACACCCAGGCTTGCTCTCTCAGGTGTCCATGGATTTACTGCTGATGAAGATTGGCAGCAAAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140364.8 |
||
| CDS CAA 72 bp | AATTTGATATATGTTGGGCCTGAGGTCTCTGTAGCTTaGAAAAGCAGATGGAGCCAGAGGGTGGAGAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: NLIYVGPEVSVA*KSRWSQRVERP Trigger: TGGCCTCTCCACCCTCTGGCTCCATCTGCTTTTCAAAGCTACAGAGACCTCAGGCCCAACATATATCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CAA 72 bp | CTGTCTTCCTCCAACAAGGAAATACTAGCGAACGCTTaGTACACTTGGGCCACACAACCTGAACCTACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSNKEILANA*YTWATQPEPTG Trigger: ACCTGTAGGTTCAGGTTGTGTGGCCCAAGTGTACAAAGCGTTCGCTAGTATTTCCTTGTTGGAGGAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
||
| CDS CAA 72 bp | CTAAGCCATTTGACTCCAGGTAAAAGCCCCAGGGCTTaGCTGCCAATCTTCATCAGCAGTAAATCCATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSHLTPGKSPRA*LPIFISSKSMD Trigger: GTCCATGGATTTACTGCTGATGAAGATTGGCAGCAAAGCCCTGGGGCTTTTACCTGGAGTCAAATGGCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140364.8 ENSMUST00000149304.2 |
||
| CDS CAA 90 bp | ATTAATTTGGGCAAAGTACCTAGCAGAAACCAACATAGTCTGGCATaGCGAGAGCATCCCAGGGGTCTGGAATGCCCAAGTTCCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: INLGKVPSRNQHSLA*REHPRGLECPSSFL Trigger: CAGAAAGGAACTTGGGCATTCCAGACCCCTGGGATGCTCTCGCAATGCCAGACTATGTTGGTTTCTGCTAGGTACTTTGCCCAAATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 |
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| CDS TCA 72 bp | CAAAGTTATCCACAAATATCATCTTCAAAAGCATGTTaGTCCCCAGCTGTGCAATCTTCCTCTTCAGATCGG | + |
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Preference number: 6 (lower is better) Translates to: QSYPQISSSKAC*SPAVQSSSSDR Trigger: CCGATCTGAAGAGGAAGATTGCACAGCTGGGGATCAACATGCTTTTGAAGATGATATTTGTGGATAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051249.13 ENSMUST00000140364.8 ENSMUST00000145788.8 |
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