RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021044

Ensembl transcript IDs: ENSMUST00000101165.9, ENSMUST00000166940.3, ENSMUST00000222695.2

Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATaGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGACCACAG +
Preference number: 1 (lower is better)
Translates to: IPGPQDKATPRQGLQ*QSMRVPWMTTLGPQ
Trigger: CTGTGGTCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR GCA 90 bp AGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTaGTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGA +
Preference number: 1 (lower is better)
Translates to: RDDQVNGTHRRWERG*FIPSHSPGHSRTSR
Trigger: TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR CCA 90 bp CCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATaGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCC +
Preference number: 1 (lower is better)
Translates to: PHKSRDDQVNGTHRR*ERGCFIPSHSPGHS
Trigger: GGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR TCA 90 bp AATATATACAATACATATAACACTGAAGGTGTCACCATGACAGCATaGGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCA +
Preference number: 1 (lower is better)
Translates to: NIYNTYNTEGVTMTA*AHSCIVPSQMQSSS
Trigger: TGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATGGTGACACCTTCAGTGTTATATGTATTGTATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR-3UTR CCA 90 bp ACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGGAAGGAATGAGGTGTaGAAAGACACTACGAAGGGG +
Preference number: 2 (lower is better)
Translates to: TSRQGHPKAGAPMAEHEGGRNEV*KDTTKG
Trigger: CCCCTTCGTAGTGTCTTTCCACACCTCATTCCTTCC...ACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR-3UTR GCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACAGATGGGAGAGAGGTTaGTTTATCCCATCTCACTCT +
Preference number: 2 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNRWERG*FIPSHS
Trigger: AGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCT...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR-3UTR CCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCGGAAGGAATGAGGTGTaGAAAGACACTACGAAGGGG +
Preference number: 2 (lower is better)
Translates to: SQWHTQEMGERLLYPISLGRNEV*KDTTKG
Trigger: CCCCTTCGTAGTGTCTTTCCACACCTCATTCCTTCC...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR-3UTR CCA 90 bp GAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGAGGAAGGAATGAGGTGTaGAAAGACACTACGAAGGGG +
Preference number: 2 (lower is better)
Translates to: ERGCFIPSHSPGHSRTSRGRNEV*KDTTKG
Trigger: CCCCTTCGTAGTGTCTTTCCACACCTCATTCCTTCC...TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR-3UTR GCA 90 bp CACAGGTGGTTGGTCCATTCTCACAGTCCTCATAAAAGTAGGGATGACCAAGTCAGATGGGAGAGAGGTTaGTTTATCCCATCTCACTCT +
Preference number: 2 (lower is better)
Translates to: HRWLVHSHSPHKSRDDQVRWERG*FIPSHS
Trigger: AGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCT...GACTTGGTCATCCCTACTTTTATGAGGACTGTGAGAATGGACCAACCACCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR CCA 72 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATaGATGACCACTCTGGGACCACAGCCAACCCTAGGC +
Preference number: 3 (lower is better)
Translates to: RQGLQWQSMRVP*MTTLGPQPTLG
Trigger: GCCTAGGGTTGGCTGTGGTCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR CCA 72 bp CCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATaGCAGAGCATGAGGGTGCCATGGATGACCACTCTG +
Preference number: 3 (lower is better)
Translates to: PQDKATPRQGLQ*QSMRVPWMTTL
Trigger: CAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR GCA 72 bp CAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTaGTTTATCCCATCTCACTCTCCAGGACATTCCAGG +
Preference number: 3 (lower is better)
Translates to: QVNGTHRRWERG*FIPSHSPGHSR
Trigger: CCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR CCA 72 bp AGTAGGGATGACCAAGTCAATGGCACACACAGGAGATaGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCA +
Preference number: 3 (lower is better)
Translates to: SRDDQVNGTHRR*ERGCFIPSHSP
Trigger: TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR TCA 72 bp GTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTaGGGCGAGACAACTTTGGGAGTGATACAGCAAAAA +
Preference number: 3 (lower is better)
Translates to: VASFPLRCSLPH*GETTLGVIQQK
Trigger: TTTTTGCTGTATCACTCCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR TCA 72 bp AATACATATAACACTGAAGGTGTCACCATGACAGCATaGGCCCACAGTTGCATCGTTCCCTCTCAGATGCAG +
Preference number: 3 (lower is better)
Translates to: NTYNTEGVTMTA*AHSCIVPSQMQ
Trigger: CTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATGGTGACACCTTCAGTGTTATATGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR TCA 72 bp GCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGAGTaGTACAGCAAAAATATAAAGTCTGTTCTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: AVFLTEARQLWE*YSKNIKSVLCR
Trigger: CCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGACTGGCAGAGCGGAGGTaGACCTGGGATCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RQGLQWQSMRVPWMTTLGLAERR*TWDRRC
Trigger: GCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAG...TCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGCCCAATGCCCTGTTTaGCTGAGTCCCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: PRQGLQWQSMRVPWMTTLAQCPV*LSPRTG
Trigger: CCCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGC...CAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGGACATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCACCTGCCGGACCTCTTaGATGCTGCTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RTFQDLKTRPPQGRGSNGTCRTS*MLLCGA
Trigger: AGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGT...GCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGACATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCGCTGGTGTACTCTTCTaGCAGCAGGTAGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: RTFQDLKTRPPQGRGSNGAGVLF*QQVVQR
Trigger: GCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGC...GCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp ATGGATGACCACTCTGGGACCACAGCCAACCCTAGGCAGCCATGGGTCAGTGGGAGCCACGCTGGTCCATaGAGCAAGCTTGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: MDDHSGTTANPRQPWVSGSHAGP*SKLESL
Trigger: AAGGCTCTCAAGCTTGCTTCATGGACCAGCGTGGCT...CCCACTGACCCATGGCTGCCTAGGGTTGGCTGTGGTCCCAGAGTGGTCATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGGACATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGCCACGCTGGTCCATaGAGCAAGCTTGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RTFQDLKTRPPQGRGSNGSHAGP*SKLESL
Trigger: AAGGCTCTCAAGCTTGCTTCATGGACCAGCGTGGCT...GCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGCTGGCAGAGCGGAGGTaGACCTGGGATCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGLAERR*TWDRRC
Trigger: GCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAG...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGTCTTCTCGGATGACCTaGCGGACCTCTTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: HSRTSRQGHPKAGAPMAESSRMT*RTSCML
Trigger: CAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGA...CTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGAACTGTCCGACCATCATaGAACACCGCCTTGTGGACC +
Preference number: 4 (lower is better)
Translates to: RQGLQWQSMRVPWMTTLGTVRPS*NTALWT
Trigger: GGTCCACAAGGCGGTGTTGCATGATGGTCGGACAGT...TCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGACTGTCCGACCATCATaGAACACCGCCTTGTGGACC +
Preference number: 4 (lower is better)
Translates to: HSRTSRQGHPKAGAPMAETVRPS*NTALWT
Trigger: GGTCCACAAGGCGGTGTTGCATGATGGTCGGACAGT...CTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAGTGGGTAGAGGTCTaGAGCTCCCAGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARQWVEV*SSQALA
Trigger: AGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTG...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp GCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCCACCCAGTGGGTAGAGGTCTaGAGCTCCCAGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALSHLTLQDIPGPQDKATQWVEV*SSQALA
Trigger: AGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTG...GGTGGCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGATTGCATGCTGCTCTGTaGGGCTTGACTGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: RQGLQWQSMRVPWMTTLGLHAAL*GLTVQH
Trigger: GTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAA...TCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp ACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTTTGCATGCTGCTCTGTaGGGCTTGACTGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: TSRQGHPKAGAPMAEHEGLHAAL*GLTVQH
Trigger: GTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAA...ACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGAAGTGCCTGAGCATGTaGGCCACTTTCTCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: HSRTSRQGHPKAGAPMAEKCLSM*ATFSAF
Trigger: GAACGCTGAGAAAGTGGCCCACATGCTCAGGCACTT...CTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGGCAGCTCCCAGGCGCTaGCTGTACTGTTTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGAAPRR*LYCFSP
Trigger: CGGGCTGAAACAGTACAGCCAGCGCCTGGGAGCTGC...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGACATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCCATACAGGCAAACAGTaGGTAGAGGTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTFQDLKTRPPQGRGSNGHTGKQ*VEVCSS
Trigger: GGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATG...GCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGAGGATGAGCAGCATCTaGCGAGGCACATGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: PRQGLQWQSMRVPWMTTLRMSSI*RGTWLR
Trigger: CCTTAACCATGTGCCTCGCCAGATGCTGCTCATCCT...CAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGCCAGGTCTTCTCGGATaGCCTGCCGGACCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGPGLLG*PAGPLA
Trigger: TGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGG...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCTGGCAGAGCGGAGGTaGACCTGGGATCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRLAERR*TWDRRC
Trigger: GCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAG...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGAAGTACGTTGCCTGGGTaGGGGTCACAGTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARSTLPG*GSQCTK
Trigger: CTTCGTGCACTGTGACCCCCACCCAGGCAACGTACT...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCGCAGCTCCCAGGCGCTaGCTGTACTGTTTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGAAPRR*LYCFSP
Trigger: CGGGCTGAAACAGTACAGCCAGCGCCTGGGAGCTGC...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp GGGTCAGTGGGTCGTCCCAGCGTGAAGGAAGGAATGAGGTGTGGAAAGACACTAACTGTCCGACCATCATaGAACACCGCCTTGTGGACC +
Preference number: 4 (lower is better)
Translates to: GSVGRPSVKEGMRCGKTLTVRPS*NTALWT
Trigger: GGTCCACAAGGCGGTGTTGCATGATGGTCGGACAGT...TAGTGTCTTTCCACACCTCATTCCTTCCTTCACGCTGGGACGACCCACTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGAAATCTGGGAAAAGTTaGTTCACGGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: HSRTSRQGHPKAGAPMAEKSGKS*FTARTS
Trigger: GCTTGTCCTGGCCGTGAAGCAACTTTTCCCAGATTT...CTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGAGGGTGGGGGTCACAGTaGACGAAGCCATTGACAAAG +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARGWGSQ*TKPLTK
Trigger: CTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCC...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACTCCTCAGAGCCATATaGGACACTCCTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARLLRAI*DTPQGG
Trigger: ACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAG...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCCACCGCTGGTGTACTCTTCTaGCAGCAGGTAGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ALSHLTLQDIPGPQDKATAGVLF*QQVVQR
Trigger: GCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGC...GGTGGCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp GAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACCAGGTCTTCTCGGATaGCCTGCCGGACCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ERGCFIPSHSPGHSRTSRPGLLG*PAGPLA
Trigger: TGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGG...TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGAGTGCACGAAGCCATTaGCAAAGATCATCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PRQGLQWQSMRVPWMTTLSARSH*QRSSHC
Trigger: ACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACT...CAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CACAGGTGGTTGGTCCATTCTCACAGTCCTCATAAAAGTAGGGATGACCAAGTCGCCCAATGCCCTGTTTaGCTGAGTCCCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: HRWLVHSHSPHKSRDDQVAQCPV*LSPRTG
Trigger: CCCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGC...GACTTGGTCATCCCTACTTTTATGAGGACTGTGAGAATGGACCAACCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGTCTTCTCGGATGACCTaGCGGACCTCTTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGSSRMT*RTSCML
Trigger: CAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGA...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGACAGTGGGTAGAGGTCTaGAGCTCCCAGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRQWVEV*SSQALA
Trigger: AGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTG...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACCTCCTCAGAGCCATATaGGACACTCCTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNLLRAI*DTPQGG
Trigger: ACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAG...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGAGCGCCCCCAGGTGCTaGCCCACCTTGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRSAPRC*PTLMKV
Trigger: CACTTTCATCAAGGTGGGCCAGCACCTGGGGGCGCT...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGCAGCTCCCAGGCGCTaGCTGTACTGTTTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRAAPRR*LYCFSP
Trigger: CGGGCTGAAACAGTACAGCCAGCGCCTGGGAGCTGC...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGACATCCACCAGCCACATaGATTCAAAATCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: RQGLQWQSMRVPWMTTLGHPPAT*IQNLGK
Trigger: TTTTCCCAGATTTTGAATTCATGTGGCTGGTGGATG...TCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGTGTAGGCCCTGTCGTTaGCTTGACCTCCCTCTACAA +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGCRPCR*LDLPLQ
Trigger: TTGTAGAGGGAGGTCAAGTCAACGACAGGGCCTACA...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCAATGCCCTGTTTGACTaGGTCCCAGGACCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SMAHTGDGREVALSHLTLNALFD*VPGPGC
Trigger: ACAGCCCGGTCCTGGGACTCAGTCAAACAGGGCATT...GAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGAATGCCCTGTTTGACTaGGTCCCAGGACCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRNALFD*VPGPGC
Trigger: ACAGCCCGGTCCTGGGACTCAGTCAAACAGGGCATT...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CATGACAGCATGAGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCAACACCGAGACATGTTaGGGAAGGAACTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: HDSMSPQLHRSLSDAVFLNTETC*GRNWHW
Trigger: CCAGTGCCAGTTCCTTCCTCAACATGTCTCGGTGTT...GAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGAACACCGAGACATGTTaGGGAAGGAACTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGNTETC*GRNWHW
Trigger: CCAGTGCCAGTTCCTTCCTCAACATGTCTCGGTGTT...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGAATATCTGAGTCCTTCTaGAGAAAGAGCCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARISESF*RKSRHP
Trigger: GGGATGCCGGCTCTTTCTTCAGAAGGACTCAGATAT...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCTCTTCTCGGATGACCTaGCGGACCTCTTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGSSRMT*RTSCML
Trigger: CAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGA...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACGTGCTGGACCTTAACTaGCACTGTCCGACCATCATG +
Preference number: 4 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNVLDLN*HCPTIM
Trigger: CATGATGGTCGGACAGTGGCAGTTAAGGTCCAGCAC...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGGCAGAGACTGGAGCTTaGCCAATGCCCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGAETGA*PMPCLT
Trigger: AGTCAAACAGGGCATTGGGCAAGCTCCAGTCTCTGC...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCTCCTCAGAGCCATATaGGACACTCCTCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GMTKSMAHTGDGREVALSLLRAI*DTPQGG
Trigger: ACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAG...GGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGAACACCTTCAGTGTGCTaGTGTACTCTTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPQLHRSLSDAVFLTEARTPSVC*CTLLAA
Trigger: TGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGT...TCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCCACCTTGCATGCTGCTCTGTaGGGCTTGACTGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: ALSHLTLQDIPGPQDKATLHAAL*GLTVQH
Trigger: GTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAA...GGTGGCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CATGACAGCATGAGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCAAGTGCCTGAGCATGTaGGCCACTTTCTCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: HDSMSPQLHRSLSDAVFLKCLSM*ATFSAF
Trigger: GAACGCTGAGAAAGTGGCCCACATGCTCAGGCACTT...GAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CATGACAGCATGAGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCGTAGACAGCTCCCAGTaGATCTGGGGAACCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HDSMSPQLHRSLSDAVFLVDSSQ*IWGTFR
Trigger: CCTAAAGGTTCCCCAGATCCACTGGGAGCTGTCTAC...GAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGAGTACGTTGCCTGGGTaGGGGTCACAGTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRSTLPG*GSQCTK
Trigger: CTTCGTGCACTGTGACCCCCACCCAGGCAACGTACT...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp TCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCAGTACGTTGCCTGGGTaGGGGTCACAGTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: SMAHTGDGREVALSHLTLSTLPG*GSQCTK
Trigger: CTTCGTGCACTGTGACCCCCACCCAGGCAACGTACT...GAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACCATACAGGCAAACAGTaGGTAGAGGTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNHTGKQ*VEVCSS
Trigger: GGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATG...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGAGGATGAGCAGCATCTaGCGAGGCACATGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGRMSSI*RGTWLR
Trigger: CCTTAACCATGTGCCTCGCCAGATGCTGCTCATCCT...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGAGCGCGTGCCCAGGGTaGTCTCAATGCTACGGAGTA +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRSACPG*SQCYGV
Trigger: TACTCCGTAGCATTGAGACCACCCTGGGCACGCGCT...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCAGCGCGTGCCCAGGGTaGTCTCAATGCTACGGAGTA +
Preference number: 4 (lower is better)
Translates to: SQWHTQEMGERLLYPISLSACPG*SQCYGV
Trigger: TACTCCGTAGCATTGAGACCACCCTGGGCACGCGCT...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACATATCTGAGTCCTTCTaGAGAAAGAGCCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNISESF*RKSRHP
Trigger: GGGATGCCGGCTCTTTCTTCAGAAGGACTCAGATAT...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp ACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTTCACTGAAAGATATCTaGGTCCTTCTGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TSRQGHPKAGAPMAEHEGSLKDI*VLLKKE
Trigger: CTCTTTCTTCAGAAGGACTCAGATATCTTTCAGTGA...ACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGGGACCTCTTGCATGCTaGTCTGTGGGGCTTGACTGT +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRGPLAC*SVGLDC
Trigger: ACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCC...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCGGACCTCTTGCATGCTaGTCTGTGGGGCTTGACTGT +
Preference number: 4 (lower is better)
Translates to: SQWHTQEMGERLLYPISLGPLAC*SVGLDC
Trigger: ACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCC...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCAGGATGAGCAGCATCTaGCGAGGCACATGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGRMSSI*RGTWLR
Trigger: CCTTAACCATGTGCCTCGCCAGATGCTGCTCATCCT...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp GAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGATGTAGGCCCTGTCGTTaGCTTGACCTCCCTCTACAA +
Preference number: 4 (lower is better)
Translates to: ERGCFIPSHSPGHSRTSRCRPCR*LDLPLQ
Trigger: TTGTAGAGGGAGGTCAAGTCAACGACAGGGCCTACA...TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCGTGCTGGACCTTAACTaGCACTGTCCGACCATCATG +
Preference number: 4 (lower is better)
Translates to: SQWHTQEMGERLLYPISLVLDLN*HCPTIM
Trigger: CATGATGGTCGGACAGTGGCAGTTAAGGTCCAGCAC...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGTGCTGGACCTTAACTaGCACTGTCCGACCATCATG +
Preference number: 4 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPVLDLN*HCPTIM
Trigger: CATGATGGTCGGACAGTGGCAGTTAAGGTCCAGCAC...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGAAATCTGGGAAAAGTTaGTTCACGGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGKSGKS*FTARTS
Trigger: GCTTGTCCTGGCCGTGAAGCAACTTTTCCCAGATTT...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTAGGAAGTCAAAGTaGCTGAGCATGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNFRKSK*LSMWAT
Trigger: AGTGGCCCACATGCTCAGGCACTTTGACTTCCTAAA...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTTGGGTTTAGGAAGTCAAAGTaGCTGAGCATGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: CIVPSQMQSSSLRRDNFGFRKSK*LSMWAT
Trigger: AGTGGCCCACATGCTCAGGCACTTTGACTTCCTAAA...CCCAAAGTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CATGACAGCATGAGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCTTTAGGAAGTCAAAGTaGCTGAGCATGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HDSMSPQLHRSLSDAVFLFRKSK*LSMWAT
Trigger: AGTGGCCCACATGCTCAGGCACTTTGACTTCCTAAA...GAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGGGTGGGGGTCACAGTaGACGAAGCCATTGACAAAG +
Preference number: 4 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRGWGSQ*TKPLTK
Trigger: CTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCC...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGCAGAGACTGGAGCTTaGCCAATGCCCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPAETGA*PMPCLT
Trigger: AGTCAAACAGGGCATTGGGCAAGCTCCAGTCTCTGC...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAAAGTGCCTGAGCATGTaGGCCACTTTCTCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPKCLSM*ATFSAF
Trigger: GAACGCTGAGAAAGTGGCCCACATGCTCAGGCACTT...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGAGTAGACAGCTCCCAGTaGATCTGGGGAACCTTTAGG +
Preference number: 4 (lower is better)
Translates to: ERGCFIPSHSPGHSRTSRVDSSQ*IWGTFR
Trigger: CCTAAAGGTTCCCCAGATCCACTGGGAGCTGTCTAC...TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
3UTR CAA 72 bp CCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTaGCTTTATCCCATCTCACTCTCCAGGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: PSQWHTQEMGER*LYPISLSRTFQ
Trigger: CTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGACACCTTCAGTGTGCTaGTGTACTCTTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRTPSVC*CTLLAA
Trigger: TGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGT...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CACAGGTGGTTGGTCCATTCTCACAGTCCTCATAAAAGTAGGGATGACCAAGTCGTAGACAGCTCCCAGTaGATCTGGGGAACCTTTAGG +
Preference number: 4 (lower is better)
Translates to: HRWLVHSHSPHKSRDDQVVDSSQ*IWGTFR
Trigger: CCTAAAGGTTCCCCAGATCCACTGGGAGCTGTCTAC...GACTTGGTCATCCCTACTTTTATGAGGACTGTGAGAATGGACCAACCACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGACATACAGGCAAACAGTaGGTAGAGGTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRHTGKQ*VEVCSS
Trigger: GGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATG...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TTGGGAGTGATACAGCAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCGCCCAATGCCCTGTTTaGCTGAGTCCCAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: LGVIQQKYKVCSLQVLSFAQCPV*LSPRTG
Trigger: CCCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGC...GAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CACAGGTGGTTGGTCCATTCTCACAGTCCTCATAAAAGTAGGGATGACCAAGTCATATCTGAGTCCTTCTaGAGAAAGAGCCGGCATCCC +
Preference number: 4 (lower is better)
Translates to: HRWLVHSHSPHKSRDDQVISESF*RKSRHP
Trigger: GGGATGCCGGCTCTTTCTTCAGAAGGACTCAGATAT...GACTTGGTCATCCCTACTTTTATGAGGACTGTGAGAATGGACCAACCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CACAGGTGGTTGGTCCATTCTCACAGTCCTCATAAAAGTAGGGATGACCAAGTCACACCTTCAGTGTGCTaGTGTACTCTTCTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRWLVHSHSPHKSRDDQVTPSVC*CTLLAA
Trigger: TGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGT...GACTTGGTCATCCCTACTTTTATGAGGACTGTGAGAATGGACCAACCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp GAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGATACATCTTGCCCAGGTaGCAGGAGATCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: ERGCFIPSHSPGHSRTSRYILPR*QEISFT
Trigger: TGTGAATGAGATCTCCTGCCACCTGGGCAAGATGTA...TCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAAGTGCACGAAGCCATTaGCAAAGATCATCTCACTGT +
Preference number: 4 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPSARSH*QRSSHC
Trigger: ACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACT...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCAGTGCACGAAGCCATTaGCAAAGATCATCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SQWHTQEMGERLLYPISLSARSH*QRSSHC
Trigger: ACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACT...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTCATCCACCAGCCACATaGATTCAAAATCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SRDDQVNGTHRRWERGCFHPPAT*IQNLGK
Trigger: TTTTCCCAGATTTTGAATTCATGTGGCTGGTGGATG...AAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCCATCCACCAGCCACATaGATTCAAAATCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SQWHTQEMGERLLYPISLHPPAT*IQNLGK
Trigger: TTTTCCCAGATTTTGAATTCATGTGGCTGGTGGATG...GAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp TTGGGAGTGATACAGCAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCAATGCCCTGTTTGACTaGGTCCCAGGACCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGVIQQKYKVCSLQVLSFNALFD*VPGPGC
Trigger: ACAGCCCGGTCCTGGGACTCAGTCAAACAGGGCATT...GAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AGGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGTCACTGAAAGATATCTaGGTCCTTCTGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RLLYPISLSRTFQDLKTRSLKDI*VLLKKE
Trigger: CTCTTTCTTCAGAAGGACTCAGATATCTTTCAGTGA...CCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCATCACTGAAAGATATCTaGGTCCTTCTGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPSLKDI*VLLKKE
Trigger: CTCTTTCTTCAGAAGGACTCAGATATCTTTCAGTGA...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAACCTGCCGGACCTCTTaGATGCTGCTCTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTTCRTS*MLLCGA
Trigger: AGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGT...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAAGCGCCCCCAGGTGCTaGCCCACCTTGATGAAAGTG +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTSAPRC*PTLMKV
Trigger: CACTTTCATCAAGGTGGGCCAGCACCTGGGGGCGCT...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAGCTGGTGTACTCTTCTaGCAGCAGGTAGTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTAGVLF*QQVVQR
Trigger: GCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGC...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAAGCGCGTGCCCAGGGTaGTCTCAATGCTACGGAGTA +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTSACPG*SQCYGV
Trigger: TACTCCGTAGCATTGAGACCACCCTGGGCACGCGCT...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAAGCCACGCTGGTCCATaGAGCAAGCTTGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTSHAGP*SKLESL
Trigger: AAGGCTCTCAAGCTTGCTTCATGGACCAGCGTGGCT...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR TCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACATGTAGGCCCTGTCGTTaGCTTGACCTCCCTCTACAA +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTCRPCR*LDLPLQ
Trigger: TTGTAGAGGGAGGTCAAGTCAACGACAGGGCCTACA...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR GCA 90 bp TTGGGAGTGATACAGCAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCAAATCTGGGAAAAGTTaGTTCACGGCCAGGACAAGC +
Preference number: 4 (lower is better)
Translates to: LGVIQQKYKVCSLQVLSFKSGKS*FTARTS
Trigger: GCTTGTCCTGGCCGTGAAGCAACTTTTCCCAGATTT...GAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp TTGGGAGTGATACAGCAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACATCTTGCCCAGGTaGCAGGAGATCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: LGVIQQKYKVCSLQVLSFYILPR*QEISFT
Trigger: TGTGAATGAGATCTCCTGCCACCTGGGCAAGATGTA...GAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CCA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACATACATCTTGCCCAGGTaGCAGGAGATCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTYILPR*QEISFT
Trigger: TGTGAATGAGATCTCCTGCCACCTGGGCAAGATGTA...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AGGCAGGGGCTCCAATGGCAGAGCATGAGGGTGCCATGGATGACCACTCTGGGAGACCTGCCGGACCTCTaGCATGCTGCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: RQGLQWQSMRVPWMTTLGDLPDL*HAALWG
Trigger: GCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTC...TCCCAGAGTGGTCATCCATGGCACCCTCATGCTCTGCCATTGGAGCCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AGGACATTCCAGGACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCTCATGCAACACCGCCTaGTGGACCTGGGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RTFQDLKTRPPQGRGSNGSCNTA*WTWARE
Trigger: CTCCCTGGCCCAGGTCCACAAGGCGGTGTTGCATGA...GCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGTCCTGGAATGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 90 bp CCAGGACCGGGCTGTCAGCATACAGGCAAACAGTGGGTAGAGGTCTaGAGCTCCCAGGCGCTGGCTGTACTGTTTCAGCCCGTCCATGTC +
Preference number: 5 (lower is better)
Translates to: PGPGCQHTGKQWVEV*SSQALAVLFQPVHV
Trigger: GACATGGACGGGCTGAAACAGTACAGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATGCTGACAGCCCGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp TTAACTGCCACTGTCCGACCATCATGCAACACCGCCTTGTGGACCTaGGCCAGGGAGGCTGCCCCAAGAGGGGTGTCATCGAAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LTATVRPSCNTALWT*AREAAPRGVSSKLR
Trigger: CCTGAGCTTCGATGACACCCCTCTTGGGGCAGCCTCCCTGGCCCAGGTCCACAAGGCGGTGTTGCATGATGGTCGGACAGTGGCAGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp ACCTCAAGACAAGGCCACCCCAAGGCAGGGGCTCCAATGGCAGAGCATGAGGGTAGGTGCTGGCCCACCTaGATGAAAGTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: TSRQGHPKAGAPMAEHEGRCWPT*MKVPRL
Trigger: CAACCGGGGCACTTTCATCAAGGTGGGCCAGCACCT...ACCCTCATGCTCTGCCATTGGAGCCCCTGCCTTGGGGTGGCCTTGTCTTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 90 bp CGGTTGGCACAGCAGAGCTCAAAGAGACGCCTGGCAGAGCGGAGGTaGACCTGGGATCGACGCTGCAAATACTCCTCAGAGCCATATGGG +
Preference number: 5 (lower is better)
Translates to: RLAQQSSKRRLAERR*TWDRRCKYSSEPYG
Trigger: CCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCTCTGCTGTGCCAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp TGGGGCTTGACTGTGCAACACCTTCAGTGTGCTGGTGTACTCTTCTaGCAGCAGGTAGTCCAGCGCCCCCAGGTGCTGGCCCACCTTGAT +
Preference number: 5 (lower is better)
Translates to: WGLTVQHLQCAGVLF*QQVVQRPQVLAHLD
Trigger: ATCAAGGTGGGCCAGCACCTGGGGGCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp GCATGCTGCTCTGTGGGGCTTGACTGTGCAACACCTTCAGTGTGCTaGTGTACTCTTCTGGCAGCAGGTAGTCCAGCGCCCCCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ACCSVGLDCATPSVC*CTLLAAGSPAPPGA
Trigger: AGCACCTGGGGGCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGGTCAGTGGGTCGTCCCAGCGTGAAGGAAGGAATGAGGTGTGGAAAGACACTAGACCTGCCGGACCTCTaGCATGCTGCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GSVGRPSVKEGMRCGKTLDLPDL*HAALWG
Trigger: GCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTC...TAGTGTCTTTCCACACCTCATTCCTTCCTTCACGCTGGGACGACCCACTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 90 bp TCAAAGAGACGCCTGGCAGAGCGGAGGTGCACCTGGGATCGACGCTaGAAATACTCCTCAGAGCCATATGGGACACTCCTCAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SKRRLAERRCTWDRR*KYSSEPYGTLLREV
Trigger: CACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp GCACAGCAGAGCTCAAAGAGACGCCTGGCAGAGCGGAGGTGCACCTaGGATCGACGCTGCAAATACTCCTCAGAGCCATATGGGACACTC +
Preference number: 5 (lower is better)
Translates to: AQQSSKRRLAERRCT*DRRCKYSSEPYGTL
Trigger: GAGTGTCCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCTCTGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 90 bp TCTCGGATGACCTGCCGGACCTCTTGCATGCTGCTCTGTGGGGCTTaGCTGTGCAACACCTTCAGTGTGCTGGTGTACTCTTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRMTCRTSCMLLCGA*LCNTFSVLVYSSGS
Trigger: GCTGCCAGAAGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 90 bp GTCCTTAGAGCTTTGAGCCTGAACCTTCGGGTGCTGGACCTTAACTaGCACTGTCCGACCATCATGCAACACCGCCTTGTGGACCTGGGC +
Preference number: 5 (lower is better)
Translates to: VLRALSLNLRVLDLN*HCPTIMQHRLVDLG
Trigger: GCCCAGGTCCACAAGGCGGTGTTGCATGATGGTCGGACAGTGGCAGTTAAGGTCCAGCACCCGAAGGTTCAGGCTCAAAGCTCTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp GCCTTGCCCGTGTCAGGACGCTTCCGTACCAGTACGTTGCCTGGGTaGGGGTCACAGTGCACGAAGCCATTGACAAAGATCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: ALPVSGRFRTSTLPG*GSQCTKPLTKIISL
Trigger: CAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACACGGGCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp CTCAGCCTTGCCCGTGTCAGGACGCTTCCGTACCAGTACGTTGCCTaGGTGGGGGTCACAGTGCACGAAGCCATTGACAAAGATCATCTC +
Preference number: 5 (lower is better)
Translates to: LSLARVRTLPYQYVA*VGVTVHEAIDKDHL
Trigger: GAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACACGGGCAAGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCCACCTCATGCAACACCGCCTaGTGGACCTGGGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALSHLTLQDIPGPQDKATSCNTA*WTWARE
Trigger: CTCCCTGGCCCAGGTCCACAAGGCGGTGTTGCATGA...GGTGGCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 90 bp AGCTCAGGAACAAATCGTGGATCTCCTTGCCCAGGTCTTCTCGGATaGCCTGCCGGACCTCTTGCATGCTGCTCTGTGGGGCTTGACTGT +
Preference number: 5 (lower is better)
Translates to: SSGTNRGSPCPGLLG*PAGPLACCSVGLDC
Trigger: ACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGGGCAAGGAGATCCACGATTTGTTCCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp CAGGTCTTCTCGGATGACCTGCCGGACCTCTTGCATGCTGCTCTGTaGGGCTTGACTGTGCAACACCTTCAGTGTGCTGGTGTACTCTTC +
Preference number: 5 (lower is better)
Translates to: QVFSDDLPDLLHAAL*GLTVQHLQCAGVLF
Trigger: GAAGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAGACCTGCCGGACCTCTaGCATGCTGCTCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPDLPDL*HAALWG
Trigger: GCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTC...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCTCATGCAACACCGCCTaGTGGACCTGGGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGSCNTA*WTWARE
Trigger: CTCCCTGGCCCAGGTCCACAAGGCGGTGTTGCATGA...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACTTCCGTACCAGTACGTaGCCTGGGTGGGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNFRTST*PGWGSQ
Trigger: CTGTGACCCCCACCCAGGCAACGTACTGGTACGGAA...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 90 bp GAGGTGCACCTGGGATCGACGCTGCAAATACTCCTCAGAGCCATATaGGACACTCCTCAGGGAGGTGAGGTAGTCATAGCTGATGACAGC +
Preference number: 5 (lower is better)
Translates to: EVHLGSTLQILLRAI*DTPQGGEVVIADDS
Trigger: GCTGTCATCAGCTATGACTACCTCACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGGTCAGTGGGTCGTCCCAGCGTGAAGGAAGGAATGAGGTGTGGAAAGACACTAATGAAAGTGCCCCGGTaGGCACAGCAGAGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSVGRPSVKEGMRCGKTLMKVPR*AQQSSK
Trigger: CTTTGAGCTCTGCTGTGCCAACCGGGGCACTTTCAT...TAGTGTCTTTCCACACCTCATTCCTTCCTTCACGCTGGGACGACCCACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACATCAGGAGCACCCTCTaGGTAGACAGCTCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNIRSTL*VDSSQW
Trigger: CCACTGGGAGCTGTCTACCAAGAGGGTGCTCCTGAT...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCTTCCGTACCAGTACGTaGCCTGGGTGGGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: GMTKSMAHTGDGREVALSFRTST*PGWGSQ
Trigger: CTGTGACCCCCACCCAGGCAACGTACTGGTACGGAA...GGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 90 bp GTACCAGTACGTTGCCTGGGTGGGGGTCACAGTGCACGAAGCCATTaGCAAAGATCATCTCACTGTACATCTTGCCCAGGTGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: VPVRCLGGGHSARSH*QRSSHCTSCPGGRR
Trigger: TCTCCTGCCACCTGGGCAAGATGTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 90 bp TCAGGACGCTTCCGTACCAGTACGTTGCCTGGGTGGGGGTCACAGTaGACGAAGCCATTGACAAAGATCATCTCACTGTACATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SGRFRTSTLPGWGSQ*TKPLTKIISLYILP
Trigger: GGGCAAGATGTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 90 bp CTGGCTGATCTCAGGCAGGTAGCAGGCTGCATTATTGCGAATCTCTaGGTCCTCAGTAGCAGAGACTGGAGCTTGCCCAATGCCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LADLRQVAGCIIANL*VLSSRDWSLPNALF
Trigger: AAACAGGGCATTGGGCAAGCTCCAGTCTCTGCTACTGAGGACTCAGAGATTCGCAATAATGCAGCCTGCTACCTGCCTGAGATCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCATGAAAGTGCCCCGGTaGGCACAGCAGAGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGMKVPR*AQQSSK
Trigger: CTTTGAGCTCTGCTGTGCCAACCGGGGCACTTTCAT...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAAGGTGCTGGCCCACCTaGATGAAAGTGCCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRRCWPT*MKVPRL
Trigger: CAACCGGGGCACTTTCATCAAGGTGGGCCAGCACCT...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAATCAGGAGCACCCTCTaGGTAGACAGCTCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPIRSTL*VDSSQW
Trigger: CCACTGGGAGCTGTCTACCAAGAGGGTGCTCCTGAT...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCAAATCGTGGATCTCCTaGCCCAGGTCTTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: GMTKSMAHTGDGREVALSKSWIS*PRSSRM
Trigger: CATCCGAGAAGACCTGGGCAAGGAGATCCACGATTT...GGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CATGACAGCATGAGCCCACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCAATGTCCTTAGAGCTTaGAGCCTGAACCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: HDSMSPQLHRSLSDAVFLNVLRA*SLNLRV
Trigger: CACCCGAAGGTTCAGGCTCAAAGCTCTAAGGACATT...GAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTGGGCTCATGCTGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 90 bp ACCCAGCAAGCTAGCCTCAAGGCCCTCACTCGAAGCAGAAGTTCATaGAGGTTGATCTGCCACAGGCTAAAGGCCTCACTGAAAGATATC +
Preference number: 5 (lower is better)
Translates to: TQQASLKALTRSRSS*RLICHRLKASLKDI
Trigger: GATATCTTTCAGTGAGGCCTTTAGCCTGTGGCAGATCAACCTTCATGAACTTCTGCTTCGAGTGAGGGCCTTGAGGCTAGCTTGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAATGAAAGTGCCCCGGTaGGCACAGCAGAGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRMKVPR*AQQSSK
Trigger: CTTTGAGCTCTGCTGTGCCAACCGGGGCACTTTCAT...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTAAATCGTGGATCTCCTaGCCCAGGTCTTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: SRDDQVNGTHRRWERGCFKSWIS*PRSSRM
Trigger: CATCCGAGAAGACCTGGGCAAGGAGATCCACGATTT...AAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CACAGTTGCATCGTTCCCTCTCAGATGCAGTCTTCCTCACTGAGGCGAGACAACCAGTGCACGAAGCCATaGACAAAGATCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: HSCIVPSQMQSSSLRRDNQCTKP*TKIISL
Trigger: CAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTG...GTTGTCTCGCCTCAGTGAGGAAGACTGCATCTGAGAGGGAACGATGCAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GTCCTCATAAAAGTAGGGATGACCAAGTCAATGGCACACACAGGAGATGGGAGAAAATCGTGGATCTCCTaGCCCAGGTCTTCTCGGATG +
Preference number: 5 (lower is better)
Translates to: VLIKVGMTKSMAHTGDGRKSWIS*PRSSRM
Trigger: CATCCGAGAAGACCTGGGCAAGGAGATCCACGATTT...TCTCCCATCTCCTGTGTGTGCCATTGACTTGGTCATCCCTACTTTTATGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp AATGGCACACACAGGAGATGGGAGAGAGGTTGCTTTATCCCATCTCACTCTCCAAATGTCCTTAGAGCTTaGAGCCTGAACCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: NGTHRRWERGCFIPSHSPNVLRA*SLNLRV
Trigger: CACCCGAAGGTTCAGGCTCAAAGCTCTAAGGACATT...TGGAGAGTGAGATGGGATAAAGCAACCTCTCTCCCATCTCCTGTGTGTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp GGTTGCTTTATCCCATCTCACTCTCCAGGACATTCCAGGACCTCAAGACAAGGCCAGTGCACGAAGCCATaGACAAAGATCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: GCFIPSHSPGHSRTSRQGQCTKP*TKIISL
Trigger: CAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTG...GCCTTGTCTTGAGGTCCTGGAATGTCCTGGAGAGTGAGATGGGATAAAGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp TTGGGAGTGATACAGCAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCATCAGGAGCACCCTCTaGGTAGACAGCTCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGVIQQKYKVCSLQVLSFIRSTL*VDSSQW
Trigger: CCACTGGGAGCTGTCTACCAAGAGGGTGCTCCTGAT...GAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTGCTGTATCACTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACATTCCGTACCAGTACGTaGCCTGGGTGGGGGTCACAG +
Preference number: 5 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTFRTST*PGWGSQ
Trigger: CTGTGACCCCCACCCAGGCAACGTACTGGTACGGAA...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACAAATGTCCTTAGAGCTTaGAGCCTGAACCTTCGGGTG +
Preference number: 5 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTNVLRA*SLNLRV
Trigger: CACCCGAAGGTTCAGGCTCAAAGCTCTAAGGACATT...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS-3UTR CAA 90 bp CAAAAATATAAAGTCTGTTCTCTGCAGGTTCTGAGTTTCTACTTATTCCCTACACAGTGCACGAAGCCATaGACAAAGATCATCTCACTG +
Preference number: 5 (lower is better)
Translates to: QKYKVCSLQVLSFYLFPTQCTKP*TKIISL
Trigger: CAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTG...TGTAGGGAATAAGTAGAAACTCAGAACCTGCAGAGAACAGACTTTATATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 90 bp TCCAGCGCCCCCAGGTGCTGGCCCACCTTGATGAAAGTGCCCCGGTaGGCACAGCAGAGCTCAAAGAGACGCCTGGCAGAGCGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SSAPRCWPTLMKVPR*AQQSSKRRLAERRC
Trigger: GCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCTCTGCTGTGCCAACCGGGGCACTTTCATCAAGGTGGGCCAGCACCTGGGGGCGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp TGCCCCGGTTGGCACAGCAGAGCTCAAAGAGACGCCTaGCAGAGCGGAGGTGCACCTGGGATCGACGCTGCA +
Preference number: 6 (lower is better)
Translates to: CPGWHSRAQRDA*QSGGAPGIDAA
Trigger: TGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCTCTGCTGTGCCAACCGGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp GTCCCAGGACCGGGCTGTCAGCATACAGGCAAACAGTaGGTAGAGGTCTGCAGCTCCCAGGCGCTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: VPGPGCQHTGKQ*VEVCSSQALAV
Trigger: TACAGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATGCTGACAGCCCGGTCCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp CCCAGGTGCTGGCCCACCTTGATGAAAGTGCCCCGGTaGGCACAGCAGAGCTCAAAGAGACGCCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PRCWPTLMKVPR*AQQSSKRRLAE
Trigger: CTCTGCCAGGCGTCTCTTTGAGCTCTGCTGTGCCAACCGGGGCACTTTCATCAAGGTGGGCCAGCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp GCCTTGCCCGTGTCAGGACGCTTCCGTACCAGTACGTaGCCTGGGTGGGGGTCACAGTGCACGAAGCCATTG +
Preference number: 6 (lower is better)
Translates to: ALPVSGRFRTST*PGWGSQCTKPL
Trigger: CAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACACGGGCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp CGCCTGGCAGAGCGGAGGTGCACCTGGGATCGACGCTaGAAATACTCCTCAGAGCCATATGGGACACTCCTC +
Preference number: 6 (lower is better)
Translates to: RLAERRCTWDRR*KYSSEPYGTLL
Trigger: GAGGAGTGTCCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp ACTGTGCAACACCTTCAGTGTGCTGGTGTACTCTTCTaGCAGCAGGTAGTCCAGCGCCCCCAGGTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: TVQHLQCAGVLF*QQVVQRPQVLA
Trigger: GGCCAGCACCTGGGGGCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGTTGCACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp CAGCAGAGCTCAAAGAGACGCCTGGCAGAGCGGAGGTaGACCTGGGATCGACGCTGCAAATACTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: QQSSKRRLAERR*TWDRRCKYSSE
Trigger: CTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp GGCTGTCAGCATACAGGCAAACAGTGGGTAGAGGTCTaGAGCTCCCAGGCGCTGGCTGTACTGTTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: GCQHTGKQWVEV*SSQALAVLFQP
Trigger: GGGCTGAAACAGTACAGCCAGCGCCTGGGAGCTGCAGACCTCTACCCACTGTTTGCCTGTATGCTGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp GCCCGTGTCAGGACGCTTCCGTACCAGTACGTTGCCTaGGTGGGGGTCACAGTGCACGAAGCCATTGACAAA +
Preference number: 6 (lower is better)
Translates to: ARVRTLPYQYVA*VGVTVHEAIDK
Trigger: TTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACACGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp CTTGCCCAGGTCTTCTCGGATGACCTGCCGGACCTCTaGCATGCTGCTCTGTGGGGCTTGACTGTGCAACAC +
Preference number: 6 (lower is better)
Translates to: LAQVFSDDLPDL*HAALWGLTVQH
Trigger: GTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 90 bp GTGGATCTCCTTGCCCAGGTCTTCTCGGATGACCTGCCGGACCTCTaGCATGCTGCTCTGTGGGGCTTGACTGTGCAACACCTTCAGTGT +
Preference number: 6 (lower is better)
Translates to: VDLLAQVFSDDLPDL*HAALWGLTVQHLQC
Trigger: ACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGGGCAAGGAGATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 90 bp CTCTTCTTGTGTTCAGCCAGCGCCCTGATACAACACCGAGACATGTaGAGGAAGGAACTGGCACTGGAGCGCGTGCCCAGGGTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LFLCSASALIQHRDM*RKELALERVPRVVS
Trigger: TGAGACCACCCTGGGCACGCGCTCCAGTGCCAGTTCCTTCCTCAACATGTCTCGGTGTTGTATCAGGGCGCTGGCTGAACACAAGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp ACAAATCGTGGATCTCCTTGCCCAGGTCTTCTCGGATaGCCTGCCGGACCTCTTGCATGCTGCTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: TNRGSPCPGLLG*PAGPLACCSVG
Trigger: CCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGAGAAGACCTGGGCAAGGAGATCCACGATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp TCTGTGGGGCTTGACTGTGCAACACCTTCAGTGTGCTaGTGTACTCTTCTGGCAGCAGGTAGTCCAGCGCCC +
Preference number: 6 (lower is better)
Translates to: SVGLDCATPSVC*CTLLAAGSPAP
Trigger: GGGCGCTGGACTACCTGCTGCCAGAAGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp TCGGATGACCTGCCGGACCTCTTGCATGCTGCTCTGTaGGGCTTGACTGTGCAACACCTTCAGTGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: SDDLPDLLHAAL*GLTVQHLQCAG
Trigger: ACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGTCATCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 90 bp ACAATCTCAGCCTTGCCCGTGTCAGGACGCTTCCGTACCAGTACGTaGCCTGGGTGGGGGTCACAGTGCACGAAGCCATTGACAAAGATC +
Preference number: 6 (lower is better)
Translates to: TISALPVSGRFRTST*PGWGSQCTKPLTKI
Trigger: GATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACACGGGCAAGGCTGAGATTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp ACCTGCCGGACCTCTTGCATGCTGCTCTGTGGGGCTTaGCTGTGCAACACCTTCAGTGTGCTGGTGTACTCT +
Preference number: 6 (lower is better)
Translates to: TCRTSCMLLCGA*LCNTFSVLVYS
Trigger: AGAGTACACCAGCACACTGAAGGTGTTGCACAGTCAAGCCCCACAGAGCAGCATGCAAGAGGTCCGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp GCCACAGATGGCAGTAGTCCAGGCGGAACTCCTCCGTaGGCACCTGGTAAAGCCCATGGTCTAAGAGGACAA +
Preference number: 6 (lower is better)
Translates to: ATDGSSPGGTPP*APGKAHGLRGQ
Trigger: TTGTCCTCTTAGACCATGGGCTTTACCAGGTGCTCACGGAGGAGTTCCGCCTGGACTACTGCCATCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp AGCAGAGACTGGAGCTTGCCCAATGCCCTGTTTGACTaGGTCCCAGGACCGGGCTGTCAGCATACAGGCAAA +
Preference number: 6 (lower is better)
Translates to: SRDWSLPNALFD*VPGPGCQHTGK
Trigger: TTTGCCTGTATGCTGACAGCCCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGCAAGCTCCAGTCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp GCTTTGAGCCTGAACCTTCGGGTGCTGGACCTTAACTaGCACTGTCCGACCATCATGCAACACCGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: ALSLNLRVLDLN*HCPTIMQHRLV
Trigger: CACAAGGCGGTGTTGCATGATGGTCGGACAGTGGCAGTTAAGGTCCAGCACCCGAAGGTTCAGGCTCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp CGAATCTCTGAGTCCTCAGTAGCAGAGACTGGAGCTTaGCCAATGCCCTGTTTGACTGAGTCCCAGGACCGG +
Preference number: 6 (lower is better)
Translates to: RISESSVAETGA*PMPCLTESQDR
Trigger: CCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGCAAGCTCCAGTCTCTGCTACTGAGGACTCAGAGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp AGCTCAAAGAGACGCCTGGCAGAGCGGAGGTGCACCTaGGATCGACGCTGCAAATACTCCTCAGAGCCATAT +
Preference number: 6 (lower is better)
Translates to: SSKRRLAERRCT*DRRCKYSSEPY
Trigger: ATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAGGTGCACCTCCGCTCTGCCAGGCGTCTCTTTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp GTGTCAGGACGCTTCCGTACCAGTACGTTGCCTGGGTaGGGGTCACAGTGCACGAAGCCATTGACAAAGATC +
Preference number: 6 (lower is better)
Translates to: VSGRFRTSTLPG*GSQCTKPLTKI
Trigger: GATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAAGCGTCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp TCAGTAGCAGAGACTGGAGCTTGCCCAATGCCCTGTTaGACTGAGTCCCAGGACCGGGCTGTCAGCATACAG +
Preference number: 6 (lower is better)
Translates to: SVAETGACPMPC*TESQDRAVSIQ
Trigger: CTGTATGCTGACAGCCCGGTCCTGGGACTCAGTCAAACAGGGCATTGGGCAAGCTCCAGTCTCTGCTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 90 bp CGTACCAGTACGTTGCCTGGGTGGGGGTCACAGTGCACGAAGCCATaGACAAAGATCATCTCACTGTACATCTTGCCCAGGTGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RTSTLPGWGSQCTKP*TKIISLYILPRWQE
Trigger: CTCCTGCCACCTGGGCAAGATGTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp GGTAAAGCCCATGGTCTAAGAGGACAATCTCAGCCTTaGCCGTGTCAGGACGCTTCCGTACCAGTACGTTGC +
Preference number: 6 (lower is better)
Translates to: GKAHGLRGQSQP*PCQDASVPVRC
Trigger: GCAACGTACTGGTACGGAAGCGTCCTGACACGGGCAAGGCTGAGATTGTCCTCTTAGACCATGGGCTTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp CGTTGCCTGGGTGGGGGTCACAGTGCACGAAGCCATTaGCAAAGATCATCTCACTGTACATCTTGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: RCLGGGHSARSH*QRSSHCTSCPG
Trigger: ACCTGGGCAAGATGTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp GCTAGCCTCAAGGCCCTCACTCGAAGCAGAAGTTCATaGAGGTTGATCTGCCACAGGCTAAAGGCCTCACTG +
Preference number: 6 (lower is better)
Translates to: ASLKALTRSRSS*RLICHRLKASL
Trigger: CAGTGAGGCCTTTAGCCTGTGGCAGATCAACCTTCATGAACTTCTGCTTCGAGTGAGGGCCTTGAGGCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp CTGGGATCGACGCTGCAAATACTCCTCAGAGCCATATaGGACACTCCTCAGGGAGGTGAGGTAGTCATAGCT +
Preference number: 6 (lower is better)
Translates to: LGSTLQILLRAI*DTPQGGEVVIA
Trigger: AGCTATGACTACCTCACCTCCCTGAGGAGTGTCCCATATGGCTCTGAGGAGTATTTGCAGCGTCGATCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp TCCATCAGGAGCACCCTCTTGGTAGACAGCTCCCAGTaGATCTGGGGAACCTTTAGGAAGTCAAAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: SIRSTLLVDSSQ*IWGTFRKSKCL
Trigger: CAGGCACTTTGACTTCCTAAAGGTTCCCCAGATCCACTGGGAGCTGTCTACCAAGAGGGTGCTCCTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp ACGTTGCCTGGGTGGGGGTCACAGTGCACGAAGCCATaGACAAAGATCATCTCACTGTACATCTTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TLPGWGSQCTKP*TKIISLYILPR
Trigger: CCTGGGCAAGATGTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp AGTGGATCTGGGGAACCTTTAGGAAGTCAAAGTGCCTaGGCATGTGGGCCACTTTCTCAGCGTTCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: SGSGEPLGSQSA*ACGPLSQRSSL
Trigger: AAGGGAGGAACGCTGAGAAAGTGGCCCACATGCTCAGGCACTTTGACTTCCTAAAGGTTCCCCAGATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp CTCAGGCAGGTAGCAGGCTGCATTATTGCGAATCTCTaGGTCCTCAGTAGCAGAGACTGGAGCTTGCCCAAT +
Preference number: 6 (lower is better)
Translates to: LRQVAGCIIANL*VLSSRDWSLPN
Trigger: ATTGGGCAAGCTCCAGTCTCTGCTACTGAGGACTCAGAGATTCGCAATAATGCAGCCTGCTACCTGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp TTCCGTACCAGTACGTTGCCTGGGTGGGGGTCACAGTaGACGAAGCCATTGACAAAGATCATCTCACTGTAC +
Preference number: 6 (lower is better)
Translates to: FRTSTLPGWGSQ*TKPLTKIISLY
Trigger: GTACAGTGAGATGATCTTTGTCAATGGCTTCGTGCACTGTGACCCCCACCCAGGCAACGTACTGGTACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp CGGAGTAGATCATTAGTCTTCAGGATGAGCAGCATCTaGCGAGGCACATGGTTAAGGAGCTGGCTGATCTCA +
Preference number: 6 (lower is better)
Translates to: RSRSLVFRMSSI*RGTWLRSWLIS
Trigger: TGAGATCAGCCAGCTCCTTAACCATGTGCCTCGCCAGATGCTGCTCATCCTGAAGACTAATGATCTACTCCG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp CATCGATCTGGTTCTTCTCCATGTAGGCCCTGTCGTTaGCTTGACCTCCCTCTACAAATTCCATCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: HRSGSSPCRPCR*LDLPLQIPSGA
Trigger: TGCTCCTGATGGAATTTGTAGAGGGAGGTCAAGTCAACGACAGGGCCTACATGGAGAAGAACCAGATCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS TCA 72 bp ATCTGCCACAGGCTAAAGGCCTCACTGAAAGATATCTaGGTCCTTCTGAAGAAAGAGCCGGCATCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ICHRLKASLKDI*VLLKKEPASLF
Trigger: GAAGAGGGATGCCGGCTCTTTCTTCAGAAGGACTCAGATATCTTTCAGTGAGGCCTTTAGCCTGTGGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS GCA 72 bp TCCACCAGCCACATGAATTCAAAATCTGGGAAAAGTTaGTTCACGGCCAGGACAAGCACCTCCATCAGGAGA +
Preference number: 6 (lower is better)
Translates to: STSHMNSKSGKS*FTARTSTSIRR
Trigger: TCTCCTGATGGAGGTGCTTGTCCTGGCCGTGAAGCAACTTTTCCCAGATTTTGAATTCATGTGGCTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CAA 72 bp ATCCACCAGCCACATGAATTCAAAATCTGGGAAAAGTaGCTTCACGGCCAGGACAAGCACCTCCATCAGGAG +
Preference number: 6 (lower is better)
Translates to: IHQPHEFKIWEK*LHGQDKHLHQE
Trigger: CTCCTGATGGAGGTGCTTGTCCTGGCCGTGAAGCAACTTTTCCCAGATTTTGAATTCATGTGGCTGGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2
CDS CCA 72 bp TTGACAAAGATCATCTCACTGTACATCTTGCCCAGGTaGCAGGAGATCTCATTCACATCGATCTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LTKIISLYILPR*QEISFTSIWFF
Trigger: GAAGAACCAGATCGATGTGAATGAGATCTCCTGCCACCTGGGCAAGATGTACAGTGAGATGATCTTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101165.9
ENSMUST00000166940.3
ENSMUST00000222695.2