Pregenerated sensors for ADAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000113640Ensembl transcript IDs: ENSMUST00000038411.5, ENSMUST00000221670.2, ENSMUST00000221960.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACAGGTGATCAGTATCATCACAGAGGGTGAGGCCCCCAGGCCATaGAGCCGCAGGGGACACGGGCTGGCCAGGAGCAGAGAATGGTCT | + |
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Preference number: 1 (lower is better) Translates to: AQVISIITEGEAPRP*SRRGHGLARSREWS Trigger: AGACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR CCA 90 bp | GAGCTGAGCCCCACTGTCGTCGCAGCCAGCAGAGAAGCTGCAGTCTaGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCAT | + |
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Preference number: 1 (lower is better) Translates to: ELSPTVVAASREAAV*KLRGPQSGTGDQYH Trigger: ATGATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGACGACAGTGGGGCTCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGGGCTGCAGTCTGGAAACTaGGAGGCCCACAGTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: AAPCPEPGGPGDCKTATGLQSGN*EAHSLA Trigger: TGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAG...CCCAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGCTTGTAAGCAGAGCTaGGCCCCACTGTCGTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: MAAPCPEPGGPGDCKTATACKQS*APLSSQ Trigger: CTGCGACGACAGTGGGGCTCAGCTCTGCTTACAAGC...AGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGCAGGGGACACGGGCTaGCCAGGAGCAGAGAATGGT | + |
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Preference number: 2 (lower is better) Translates to: ASREAAVWKLRGPQSGTGAGDTG*PGAENG Trigger: ACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGC...ACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGGACTGTAAGACAGCCACTGGGCTTGTAAGCAGAGCTGAGCCCCACTGTTATCATCACAGAGGGTaGGGCCCCCAGGCCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGDCKTATGLVSRAEPHCYHHRG*GPQAME Trigger: CTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATA...ACAGTGGGGCTCAGCTCTGCTTACAAGCCCAGTGGCTGTCTTACAGTCCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR CCA 72 bp | AGGCCCCCAGGCCATGGAGCCGCAGGGGACACGGGCTaGCCAGGAGCAGAGAATGGTCTAGAAGCAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RPPGHGAAGDTG*PGAENGLEAGH Trigger: GTGACCTGCTTCTAGACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGCGGCTCCATGGCCTGGGGGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR TCA 72 bp | CAGTCTGGCACAGGTGATCAGTATCATCACAGAGGGTaGGGCCCCCAGGCCATGGAGCCGCAGGGGACACGG | + |
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Preference number: 3 (lower is better) Translates to: QSGTGDQYHHRG*GPQAMEPQGTR Trigger: CCGTGTCCCCTGCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGCCAGACTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| 3UTR CCA 72 bp | CCCACTGTCGTCGCAGCCAGCAGAGAAGCTGCAGTCTaGAAACTGAGAGGCCCACAGTCTGGCACAGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: PTVVAASREAAV*KLRGPQSGTGD Trigger: ATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGACGACAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR TCA 90 bp | TGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGCAAACTGGCTTCGGGTaGGGGGCGGCCGGGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLLPAPSLEDLGTVRQPLQTGFG*GAAGQA Trigger: TGCCTGCCCGGCCGCCCCTCACCCGAAGCCAGTTTG...CAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | ATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTCAGGAACCGCGGCCCTaGCCCTGGGCCACCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: MAAPCPEPGGPGDCKTATQEPRP*PWATRS Trigger: CGACCTGGTGGCCCAGGGGCAGGGCCGCGGTTCCTG...AGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTTGTGCCCAGGCCACGTaGGTCCACGGCCGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: MAAPCPEPGGPGDCKTATCAQAT*VHGRPG Trigger: CCCAGGCCGGCCGTGGACCCACGTGGCCTGGGCACA...AGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GGAGCCGCAGGGGACACGGGCTGGCCAGGAGCAGAGAATGGTCTAGAAGCAGGTCCGCGGCCCTGCCCCTaGGCCACCAGGTCGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: GAAGDTGWPGAENGLEAGPRPCP*ATRSMH Trigger: GTGCATCGACCTGGTGGCCCAGGGGCAGGGCCGCGG...ACCTGCTTCTAGACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGCGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GGAGCCGCAGGGGACACGGGCTGGCCAGGAGCAGAGAATGGTCTAGAAGCAGGTGTGCACCTCCTGCACTaGGGCTGGGGCGCACCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GAAGDTGWPGAENGLEAGVHLLH*GWGAPA Trigger: AGCGGGTGCGCCCCAGCCGCAGTGCAGGAGGTGCAC...ACCTGCTTCTAGACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGCGGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GGAGCCGCAGGGGACACGGGCTGGCCAGGAGCAGAGAATGGTCTAGAAGCAGGTTCCACGGCCCCCGACTaGTGCTCCGACAGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GAAGDTGWPGAENGLEAGSTAPD*CSDRTG Trigger: CCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGTGGA...ACCTGCTTCTAGACCATTCTCTGCTCCTGGCCAGCCCGTGTCCCCTGCGGCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGGGCCAGCTCGCTCCTGCGTaGAGAAGAGTTGCCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLPAPSLEDLGTVRQPLGQLAPA*RRVARP Trigger: TGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTG...GCCCAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR TCA 90 bp | TCACACTCGATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGCCGGCTCGGGCACCTTaGGTGGCAGTGGCCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SHSMAAPCPEPGGPGDCKPARAP*VAVACV Trigger: TACACAGGCCACTGCCACTCAAGGTGCCCGAGCCGG...CTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCATCGAGTGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | TGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGAGGACAGGGAGGGCTTaGCATTGCGCCGGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WLLPAPSLEDLGTVRQPLRTGRA*HCAGSC Trigger: GCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCT...CAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGGGCACACCATGACGGCATaGAGCAGGGGGCTGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: AAPCPEPGGPGDCKTATGHTMTA*SRGLAT Trigger: TGTAGCCAGCCCCCTGCTGCATGCCGTCATGGTGTG...CCCAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTTGCAGTCATGGCCTGTaGCCAACACGCGGTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: MAAPCPEPGGPGDCKTATCSHGL*PTRGPR Trigger: CCTCGGACCGCGTGTTGGCCACAGGCCATGACTGCA...AGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | TGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGGCGGTGGTTGAGGTCTaGCCGAGCATGGACACGGAA | + |
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Preference number: 4 (lower is better) Translates to: WLLPAPSLEDLGTVRQPLAVVEV*PSMDTE Trigger: TTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGC...CAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR TCA 90 bp | GCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCATACTGCCCGCAGCCCCTaGGCCGCTGCCCTCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AAVWKLRGPQSGTGDQYHTARSP*AAALWA Trigger: GGCCCAGAGGGCAGCGGCTCAGGGGCTGCGGGCAGT...ATGATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | CCTGGGGACTGTAAGACAGCCACTGGGCTTGTAAGCAGAGCTGAGCCCCACTGTACGGCCCCCGACTGCTaGTCCGACAGGACAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PGDCKTATGLVSRAEPHCTAPDC*SDRTGR Trigger: CCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGT...ACAGTGGGGCTCAGCTCTGCTTACAAGCCCAGTGGCTGTCTTACAGTCCCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR TCA 90 bp | GTCGCAGCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCCCTGGAAGCGGTGGTTaGGGTCTGGCCGAGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: VAASREAAVWKLRGPQSGPGSGG*GLAEHG Trigger: TCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGG...GCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | AAGACAGCCACTGGGCTTGTAAGCAGAGCTGAGCCCCACTGTCGTCGCAGCCAGTGTCCTCATCCAGCTTaGGCACGCTACCGGCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: KTATGLVSRAEPHCRRSQCPHPA*ARYRLG Trigger: CCCGAGCCGGTAGCGTGCGCAAGCTGGATGAGGACA...CTGGCTGCGACGACAGTGGGGCTCAGCTCTGCTTACAAGCCCAGTGGCTGTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCACGCGGTCCGAGGCTaGGTCCACCACGACGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EAAVWKLRGPQSGTGDQYHAVRG*VHHDGA Trigger: GGCGCCGTCGTGGTGGACCCAGCCTCGGACCGCGTG...ATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | TCACACTCGATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGTTCACAGGCCCAGGTTaGTCTGCAAAGCCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SHSMAAPCPEPGGPGDCKFTGPG*SAKPEV Trigger: CACCTCAGGCTTTGCAGAGCAACCTGGGCCTGTGAA...CTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCATCGAGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GTCGCAGCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACACTGCTGCAGTCATaGCCTGTGGCCAACACGCGG | + |
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Preference number: 4 (lower is better) Translates to: VAASREAAVWKLRGPQSGTLLQS*PVANTR Trigger: CCGCGTGTTGGCCACAGGCCATGACTGCAGCAGTGT...GCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | ATGGCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTAAGGAGCAAGCCGGGTaGCTTCTGAGGTCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: MAAPCPEPGGPGDCKTATKEQAG*LLRSQE Trigger: TTCCTGTGACCTCAGAAGCCACCCGGCTTGCTCCTT...AGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTTGCGTGGAGAAGAGTTaGCCGGCCAGAGCACTGGTC | + |
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Preference number: 4 (lower is better) Translates to: ASREAAVWKLRGPQSGTGCVEKS*PARALV Trigger: GACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCA...ACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | AAGACAGCCACTGGGCTTGTAAGCAGAGCTGAGCCCCACTGTCGTCGCAGCCAGGGGCTGGGCAGGAAGTaGATAGACAGCAGACACCTC | + |
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Preference number: 4 (lower is better) Translates to: KTATGLVSRAEPHCRRSQGLGRK*IDSRHL Trigger: GAGGTGTCTGCTGTCTATCCACTTCCTGCCCAGCCC...CTGGCTGCGACGACAGTGGGGCTCAGCTCTGCTTACAAGCCCAGTGGCTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTCCATGTGGGTTTGCATaGCAGCTCGCTCCTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ASREAAVWKLRGPQSGTGPCGFA*QLAPAW Trigger: CCACGCAGGAGCGAGCTGCCATGCAAACCCACATGG...ACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCATGGGTCGGGGTCCAGCTaGCGGCACTGGTCCTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: AAVWKLRGPQSGTGDQYHGSGSS*RHWSSR Trigger: TCTCGAGGACCAGTGCCGCCAGCTGGACCCCGACCC...ATGATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GCACAGGTGATCAGTATCATCACAGAGGGTGAGGCCCCCAGGCCATGGAGCCGCCTTGTCCAGGACAGGTaGAGCATAGGCCAGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: AQVISIITEGEAPRPWSRLVQDR*SIGQYQ Trigger: CTGATACTGGCCTATGCTGCACCTGTCCTGGACAAG...GCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GCACAGGTGATCAGTATCATCACAGAGGGTGAGGCCCCCAGGCCATGGAGCCGCACAGGTCATAGCCAGTaGACACATAGGGCAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AQVISIITEGEAPRPWSRTGHSQ*THRAGC Trigger: ACAGCCTGCCCTATGTGTGCACTGGCTATGACCTGT...GCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GTCGCAGCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCATACCGCGGAACACCTaGAAGCGGTGGTTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VAASREAAVWKLRGPQSGIPRNT*KRWLRS Trigger: AGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTAT...GCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | CTGAGCCCCACTGTCGTCGCAGCCAGCAGAGAAGCTGCAGTCTGGAAACTGAGACATTGCGCCGGCTCTTaGTCCTCACTTTCAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSPTVVAASREAAVWKLRHCAGS*SSLSAF Trigger: GAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATG...TCTCAGTTTCCAGACTGCAGCTTCTCTGCTGGCTGCGACGACAGTGGGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR GCA 90 bp | GAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATGGGGGCTGGCTACACTaGTGCAGTCATGGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAAVWKLRGPQSGTGDQYGGWLH*CSHGLW Trigger: CCACAGGCCATGACTGCAGCAGTGTAGCCAGCCCCC...ATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCATAGGAGGCGGGACGTCTaGCGCTTGTCCAGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: AAVWKLRGPQSGTGDQYHRRRDV*RLSRTG Trigger: ACCTGTCCTGGACAAGCGCCAGACGTCCCGCCTCCT...ATGATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATAACACCTGGAAGCGGTaGTTGAGGTCTGGCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAAVWKLRGPQSGTGDQYNTWKR*LRSGRA Trigger: TGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTT...ATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CCA 90 bp | GAAGCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATACCTGCTTGTCTTCATaGAAGGATGTAGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAAVWKLRGPQSGTGDQYTCLSS*KDVGQW Trigger: CCACTGGCCTACATCCTTCCATGAAGACAAGCAGGT...ATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | GCACCAGGAAAGGTGTGCCCAGGCCACGTGGGTCCACGGCCGGCCTaGGAAGGAGCTCCGCCAGAGAGCGCGGGCCCGCGGAGGGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: APGKVCPGHVGPRPA*EGAPPESAGPRRAL Trigger: CAGGGCCCTCCGCGGGCCCGCGCTCTCTGGCGGAGCTCCTTCCCAGGCCGGCCGTGGACCCACGTGGCCTGGGCACACCTTTCCTGGTGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | CGGCCGGGCAGGCACAGGCACCAGGAAAGGTGTGCCCAGGCCACGTaGGTCCACGGCCGGCCTGGGAAGGAGCTCCGCCAGAGAGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: RPGRHRHQERCAQAT*VHGRPGKELRQRAR Trigger: CCGCGCTCTCTGGCGGAGCTCCTTCCCAGGCCGGCCGTGGACCCACGTGGCCTGGGCACACCTTTCCTGGTGCCTGTGCCTGCCCGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS TCA 90 bp | TCCGAGGCTGGGTCCACCACGACGGCGCCCACTGCCCGCAGCCCCTaGGCCGCTGCCCTCTGGGCCGCACATACCGCCCGTTCCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: SEAGSTTTAPTARSP*AAALWAAHTARSMW Trigger: CCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGCGGCTCAGGGGCTGCGGGCAGTGGGCGCCGTCGTGGTGGACCCAGCCTCGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS TCA 90 bp | GCGCGGGCCCGCGGAGGGCCCTGCCAAGCACAGCAGCAGATCCGATaGCTGTGCACCTCCTGCACTGCGGCTGGGGCGCACCCGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: ARARGGPCQAQQQIR*LCTSCTAAGAHPLE Trigger: CTCAAGCGGGTGCGCCCCAGCCGCAGTGCAGGAGGTGCACAGTCATCGGATCTGCTGCTGTGCTTGGCAGGGCCCTCCGCGGGCCCGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | TACACTGCTGCAGTCATGGCCTGTGGCCAACACGCGGTCCGAGGCTaGGTCCACCACGACGGCGCCCACTGCCCGCAGCCCCTGAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: YTAAVMACGQHAVRG*VHHDGAHCPQPLSR Trigger: GCGGCTCAGGGGCTGCGGGCAGTGGGCGCCGTCGTGGTGGACCCAGCCTCGGACCGCGTGTTGGCCACAGGCCATGACTGCAGCAGTGTA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CAA 90 bp | GCTGCTCCCTGCCCCGAGCCTGGAGGACCTGGGGACTGTAAGACAGCCACTGGGCTGGGGCGCACCCGCTaGAGGTGGGGCTGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: AAPCPEPGGPGDCKTATGLGRTR*RWGWAG Trigger: TCCTGCCCAGCCCCACCTCAAGCGGGTGCGCCCCAG...CCCAGTGGCTGTCTTACAGTCCCCAGGTCCTCCAGGCTCGGGGCAGGGAGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | TGGGTCCACCACGACGGCGCCCACTGCCCGCAGCCCCTGAGCCGCTaGCCTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WVHHDGAHCPQPLSR*PLGRTYRPFHVGLH Trigger: ATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGCGGCTCAGGGGCTGCGGGCAGTGGGCGCCGTCGTGGTGGACCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | ACTGCGGCTGGGGCGCACCCGCTTGAGGTGGGGCTGGGCAGGAAGTaGATAGACAGCAGACACCTCCCGGAGGAGGCGGGACGTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAAGAHPLEVGLGRK*IDSRHLPEEAGRLA Trigger: CGCCAGACGTCCCGCCTCCTCCGGGAGGTGTCTGCTGTCTATCCACTTCCTGCCCAGCCCCACCTCAAGCGGGTGCGCCCCAGCCGCAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS GCA 90 bp | GCCGCTGCCCTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTTaGATGGCAGCTCGCTCCTGCGTGGAGAAGAGTTGCCCGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAALWAAHTARSMWV*MAARSCVEKSCPAR Trigger: TCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | AAGGAGCAAGCCGGGTGGCTTCTGAGGTCACAGGAACCGCGGCCCTaGCCCTGGGCCACCAGGTCGATGCACACCATGACGGCATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEQAGWLLRSQEPRP*PWATRSMHTMTACS Trigger: GCTGCATGCCGTCATGGTGTGCATCGACCTGGTGGCCCAGGGGCAGGGCCGCGGTTCCTGTGACCTCAGAAGCCACCCGGCTTGCTCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | ACCATGACGGCATGCAGCAGGGGGCTGGCTACACTGCTGCAGTCATaGCCTGTGGCCAACACGCGGTCCGAGGCTGGGTCCACCACGACG | + |
|
Preference number: 5 (lower is better) Translates to: TMTACSRGLATLLQS*PVANTRSEAGSTTT Trigger: CGTCGTGGTGGACCCAGCCTCGGACCGCGTGTTGGCCACAGGCCATGACTGCAGCAGTGTAGCCAGCCCCCTGCTGCATGCCGTCATGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | ACGGCCCCCGACTGCTGCTCCGACAGGACAGGGAGGGCTTGCCATTaGGCCGGCTCTTGCTCCTCACTTTCAGCCTTCACAGGCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAPDCCSDRTGRACH*AGSCSSLSAFTGPG Trigger: ACCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS GCA 90 bp | AGCTCCACGGCCCCCGACTGCTGCTCCGACAGGACAGGGAGGGCTTaGCATTGCGCCGGCTCTTGCTCCTCACTTTCAGCCTTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSTAPDCCSDRTGRA*HCAGSCSSLSAFTG Trigger: GCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGTGGAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | CTGCCCTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTTGCATaGCAGCTCGCTCCTGCGTGGAGAAGAGTTGCCCGGCCAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSGPHIPPVPCGFA*QLAPAWRRVARPEH Trigger: GTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | GGTCACCTGCTTGTCTTCATGGAAGGATGTAGGCCAGTGGGCTCGTaGCTCCTCAAACTGGCTTCGGGTGAGGGGCGGCCGGGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHLLVFMEGCRPVGS*LLKLASGEGRPGRH Trigger: GTGCCTGCCCGGCCGCCCCTCACCCGAAGCCAGTTTGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGACAAGCAGGTGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS TCA 90 bp | AGGCTGTCCTCATCCAGCTTGCGCACGCTACCGGCTCGGGCACCTTaGGTGGCAGTGGCCTGTGTAAAGGAGCAAGCCGGGTGGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSSSSLRTLPARAP*VAVACVKEQAGWLL Trigger: CAGAAGCCACCCGGCTTGCTCCTTTACACAGGCCACTGCCACTCAAGGTGCCCGAGCCGGTAGCGTGCGCAAGCTGGATGAGGACAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | GGTCATAGCCAGTGCACACATAGGGCAGGCTGTCCTCATCCAGCTTaGGCACGCTACCGGCTCGGGCACCTTGAGTGGCAGTGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHSQCTHRAGCPHPA*ARYRLGHLEWQWPV Trigger: CACAGGCCACTGCCACTCAAGGTGCCCGAGCCGGTAGCGTGCGCAAGCTGGATGAGGACAGCCTGCCCTATGTGTGCACTGGCTATGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | TCTTCATGGAAGGATGTAGGCCAGTGGGCTCGTGCCTCCTCAAACTaGCTTCGGGTGAGGGGCGGCCGGGCAGGCACAGGCACCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSWKDVGQWARASSN*LRVRGGRAGTGTRK Trigger: TTTCCTGGTGCCTGTGCCTGCCCGGCCGCCCCTCACCCGAAGCCAGTTTGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | ATACCGCGGAACACCTGGAAGCGGTGGTTGAGGTCTGGCCGAGCATaGACACGGAAGAGTGTGCCCAAGGCACCATCAGGGGAGGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPRNTWKRWLRSGRA*TRKSVPKAPSGEGA Trigger: GGCTCCCTCCCCTGATGGTGCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | GGGTCCAGCTGGCGGCACTGGTCCTCGAGAATACCGCGGAACACCTaGAAGCGGTGGTTGAGGTCTGGCCGAGCATGGACACGGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSSWRHWSSRIPRNT*KRWLRSGRAWTRKS Trigger: ACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGACCAGTGCCGCCAGCTGGACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CAA 90 bp | GCACAGGTGATCAGTATCATCACAGAGGGTGAGGCCCCCAGGCCATGGAGCCGCCTGCGTGGAGAAGAGTaGCCCGGCCAGAGCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AQVISIITEGEAPRPWSRLRGEE*PGQSTG Trigger: ACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAG...GCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS-3UTR CAA 90 bp | GCACAGGTGATCAGTATCATCACAGAGGGTGAGGCCCCCAGGCCATGGAGCCGCACCTGGAAGCGGTGGTaGAGGTCTGGCCGAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: AQVISIITEGEAPRPWSRTWKRW*RSGRAW Trigger: CCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGT...GCGGCTCCATGGCCTGGGGGCCTCACCCTCTGTGATGATACTGATCACCTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS TCA 90 bp | GGCACTGGTCCTCGAGAATACCGCGGAACACCTGGAAGCGGTGGTTaGGGTCTGGCCGAGCATGGACACGGAAGAGTGTGCCCAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPREYRGTPGSGG*GLAEHGHGRVCPRH Trigger: GTGCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGACCAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | GCACATACCGCCCGTTCCATGTGGGTTTGCATGGCAGCTCGCTCCTaGGTGGAGAAGAGTTGCCCGGCCAGAGCACTGGTCACCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHTARSMWVCMAARS*VEKSCPARALVTCL Trigger: CAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | AGAGCACTGGTCACCTGCTTGTCTTCATGGAAGGATGTAGGCCAGTaGGCTCGTGCCTCCTCAAACTGGCTTCGGGTGAGGGGCGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RALVTCLSSWKDVGQ*ARASSNWLRVRGGR Trigger: CCGGCCGCCCCTCACCCGAAGCCAGTTTGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | TGGCGGCACTGGTCCTCGAGAATACCGCGGAACACCTGGAAGCGGTaGTTGAGGTCTGGCCGAGCATGGACACGGAAGAGTGTGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRHWSSRIPRNTWKR*LRSGRAWTRKSVPK Trigger: CTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGACCAGTGCCGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 90 bp | TGCTGCTCCGACAGGACAGGGAGGGCTTGCCATTGCGCCGGCTCTTaGTCCTCACTTTCAGCCTTCACAGGCCCAGGTTGCTCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCSDRTGRACHCAGS*SSLSAFTGPGCSAK Trigger: CTTTGCAGAGCAACCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | GTCCTCGAGAATACCGCGGAACACCTGGAAGCGGTGGTTGAGGTCTaGCCGAGCATGGACACGGAAGAGTGTGCCCAAGGCACCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLENTAEHLEAVVEV*PSMDTEECAQGTIR Trigger: CCTGATGGTGCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 90 bp | ATACCGCCCGTTCCATGTGGGTTTGCATGGCAGCTCGCTCCTGCGTaGAGAAGAGTTGCCCGGCCAGAGCACTGGTCACCTGCTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPPVPCGFAWQLAPA*RRVARPEHWSPACL Trigger: AAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS GCA 90 bp | TCCATGTGGGTTTGCATGGCAGCTCGCTCCTGCGTGGAGAAGAGTTaGCCGGCCAGAGCACTGGTCACCTGCTTGTCTTCATGGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SMWVCMAARSCVEKS*PARALVTCLSSWKD Trigger: ATCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 90 bp | GAGAAGAGTTGCCCGGCCAGAGCACTGGTCACCTGCTTGTCTTCATaGAAGGATGTAGGCCAGTGGGCTCGTGCCTCCTCAAACTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EKSCPARALVTCLSS*KDVGQWARASSNWL Trigger: AAGCCAGTTTGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAGTCTGGAAACTGAGAGGCCCACAGTCTGGCACAGGTGATCAGTATCATGCACTGGTCACCTGCTaGTCTTCATGGAAGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: AAVWKLRGPQSGTGDQYHALVTC*SSWKDV Trigger: TACATCCTTCCATGAAGACAAGCAGGTGACCAGTGC...ATGATACTGATCACCTGTGCCAGACTGTGGGCCTCTCAGTTTCCAGACTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | AAGGTGTGCCCAGGCCACGTGGGTCCACGGCCGGCCTaGGAAGGAGCTCCGCCAGAGAGCGCGGGCCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: KVCPGHVGPRPA*EGAPPESAGPR Trigger: CCGCGGGCCCGCGCTCTCTGGCGGAGCTCCTTCCCAGGCCGGCCGTGGACCCACGTGGCCTGGGCACACCTT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS GCA 72 bp | CACGACGGCGCCCACTGCCCGCAGCCCCTGAGCCGCTaGCCTCTGGGCCGCACATACCGCCCGTTCCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: HDGAHCPQPLSR*PLGRTYRPFHV Trigger: CACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGCGGCTCAGGGGCTGCGGGCAGTGGGCGCCGTCGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | GCAGTCATGGCCTGTGGCCAACACGCGGTCCGAGGCTaGGTCCACCACGACGGCGCCCACTGCCCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AVMACGQHAVRG*VHHDGAHCPQP Trigger: GGGCTGCGGGCAGTGGGCGCCGTCGTGGTGGACCCAGCCTCGGACCGCGTGTTGGCCACAGGCCATGACTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | AGGCACAGGCACCAGGAAAGGTGTGCCCAGGCCACGTaGGTCCACGGCCGGCCTGGGAAGGAGCTCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHRHQERCAQAT*VHGRPGKELRQ Trigger: CTGGCGGAGCTCCTTCCCAGGCCGGCCGTGGACCCACGTGGCCTGGGCACACCTTTCCTGGTGCCTGTGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS TCA 72 bp | CGCGGAGGGCCCTGCCAAGCACAGCAGCAGATCCGATaGCTGTGCACCTCCTGCACTGCGGCTGGGGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RGGPCQAQQQIR*LCTSCTAAGAH Trigger: GTGCGCCCCAGCCGCAGTGCAGGAGGTGCACAGTCATCGGATCTGCTGCTGTGCTTGGCAGGGCCCTCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS TCA 72 bp | GGCCCTGCCCCTGGGCCACCAGGTCGATGCACACCATaGCGGCATGCAGCAGGGGGCTGGCTACACTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPAPGPPGRCTP*RHAAGGWLHCC Trigger: GCAGCAGTGTAGCCAGCCCCCTGCTGCATGCCGTCATGGTGTGCATCGACCTGGTGGCCCAGGGGCAGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | AAGGATGTAGGCCAGTGGGCTCGTGCCTCCTCAAACTaGCTTCGGGTGAGGGGCGGCCGGGCAGGCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDVGQWARASSN*LRVRGGRAGTG Trigger: GCCTGTGCCTGCCCGGCCGCCCCTCACCCGAAGCCAGTTTGAGGAGGCACGAGCCCACTGGCCTACATCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CAA 90 bp | CACGGCCCCCGACTGCTGCTCCGACAGGACAGGGAGGGCTTGCCATaGCGCCGGCTCTTGCTCCTCACTTTCAGCCTTCACAGGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HGPRLLLRQDREGLP*RRLLLLTFSLHRPR Trigger: CCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CAA 90 bp | AGCCGCTGCCCTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTaGCATGGCAGCTCGCTCCTGCGTGGAGAAGAGTTGCCCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRCPLGRTYRPFHVG*HGSSLLRGEELPGQ Trigger: CTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGCGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 72 bp | GGCCCCCGACTGCTGCTCCGACAGGACAGGGAGGGCTaGCCATTGCGCCGGCTCTTGCTCCTCACTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPRLLLRQDREG*PLRRLLLLTFS Trigger: GCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CAA 90 bp | CAGCTCCACGGCCCCCGACTGCTGCTCCGACAGGACAGGGAGGGCTaGCCATTGCGCCGGCTCTTGCTCCTCACTTTCAGCCTTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QLHGPRLLLRQDREG*PLRRLLLLTFSLHR Trigger: CCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTCGGGGGCCGTGGAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS GCA 72 bp | CCCTGGGCCACCAGGTCGATGCACACCATGACGGCATaGAGCAGGGGGCTGGCTACACTGCTGCAGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PWATRSMHTMTA*SRGLATLLQSW Trigger: CCATGACTGCAGCAGTGTAGCCAGCCCCCTGCTGCATGCCGTCATGGTGTGCATCGACCTGGTGGCCCAGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | GGGCCGCACATACCGCCCGTTCCATGTGGGTTTGCATaGCAGCTCGCTCCTGCGTGGAGAAGAGTTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPHIPPVPCGFA*QLAPAWRRVAR Trigger: CCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | GCTGCCCTCTGGGCCGCACATACCGCCCGTTCCATGTaGGTTTGCATGGCAGCTCGCTCCTGCGTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AALWAAHTARSM*VCMAARSCVEK Trigger: CTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS TCA 72 bp | TCATCCAGCTTGCGCACGCTACCGGCTCGGGCACCTTaGGTGGCAGTGGCCTGTGTAAAGGAGCAAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLRTLPARAP*VAVACVKEQAG Trigger: CCCGGCTTGCTCCTTTACACAGGCCACTGCCACTCAAGGTGCCCGAGCCGGTAGCGTGCGCAAGCTGGATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 72 bp | CTCATCCAGCTTGCGCACGCTACCGGCTCGGGCACCTaGAGTGGCAGTGGCCTGTGTAAAGGAGCAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LIQLAHATGSGT*SGSGLCKGASR Trigger: CCGGCTTGCTCCTTTACACAGGCCACTGCCACTCAAGGTGCCCGAGCCGGTAGCGTGCGCAAGCTGGATGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 90 bp | CAGGCTGTCCTCATCCAGCTTGCGCACGCTACCGGCTCGGGCACCTaGAGTGGCAGTGGCCTGTGTAAAGGAGCAAGCCGGGTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QAVLIQLAHATGSGT*SGSGLCKGASRVAS Trigger: AGAAGCCACCCGGCTTGCTCCTTTACACAGGCCACTGCCACTCAAGGTGCCCGAGCCGGTAGCGTGCGCAAGCTGGATGAGGACAGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 90 bp | CGGCACTGGTCCTCGAGAATACCGCGGAACACCTGGAAGCGGTGGTaGAGGTCTGGCCGAGCATGGACACGGAAGAGTGTGCCCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHWSSRIPRNTWKRW*RSGRAWTRKSVPKA Trigger: TGCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGACCAGTGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 72 bp | GACAGGACAGGGAGGGCTTGCCATTGCGCCGGCTCTTaGTCCTCACTTTCAGCCTTCACAGGCCCAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DRTGRACHCAGS*SSLSAFTGPGC Trigger: GCAACCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038411.5 ENSMUST00000221670.2 ENSMUST00000221960.2 |
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| CDS GCA 72 bp | CTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTTaGATGGCAGCTCGCTCCTGCGTGGAGAAGAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWAAHTARSMWV*MAARSCVEKSC Trigger: GCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 72 bp | CGACAGGACAGGGAGGGCTTGCCATTGCGCCGGCTCTaGCTCCTCACTTTCAGCCTTCACAGGCCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RQDREGLPLRRL*LLTFSLHRPRL Trigger: CAACCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038411.5 ENSMUST00000221670.2 ENSMUST00000221960.2 |
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| CDS CAA 72 bp | CCTCTGGGCCGCACATACCGCCCGTTCCATGTGGGTTaGCATGGCAGCTCGCTCCTGCGTGGAGAAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PLGRTYRPFHVG*HGSSLLRGEEL Trigger: CAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAACGGGCGGTATGTGCGGCCCAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 90 bp | CTGCTGCTCCGACAGGACAGGGAGGGCTTGCCATTGCGCCGGCTCTaGCTCCTCACTTTCAGCCTTCACAGGCCCAGGTTGCTCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLLRQDREGLPLRRL*LLTFSLHRPRLLCK Trigger: TTTGCAGAGCAACCTGGGCCTGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS TCA 72 bp | CCTCGAGAATACCGCGGAACACCTGGAAGCGGTGGTTaGGGTCTGGCCGAGCATGGACACGGAAGAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PREYRGTPGSGG*GLAEHGHGRVC Trigger: GCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS GCA 72 bp | GACTGCTGCTCCGACAGGACAGGGAGGGCTTGCCATTaGGCCGGCTCTTGCTCCTCACTTTCAGCCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: DCCSDRTGRACH*AGSCSSLSAFT Trigger: TGTGAAGGCTGAAAGTGAGGAGCAAGAGCCGGCGCAATGGCAAGCCCTCCCTGTCCTGTCGGAGCAGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 72 bp | TGCCCGGCCAGAGCACTGGTCACCTGCTTGTCTTCATaGAAGGATGTAGGCCAGTGGGCTCGTGCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CPARALVTCLSS*KDVGQWARASS Trigger: TGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 72 bp | AACACCTGGAAGCGGTGGTTGAGGTCTGGCCGAGCATaGACACGGAAGAGTGTGCCCAAGGCACCATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NTWKRWLRSGRA*TRKSVPKAPSG Trigger: CCCTGATGGTGCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CCA 72 bp | AATACCGCGGAACACCTGGAAGCGGTGGTTGAGGTCTaGCCGAGCATGGACACGGAAGAGTGTGCCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: NTAEHLEAVVEV*PSMDTEECAQG Trigger: GCCTTGGGCACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 72 bp | GGTTTGCATGGCAGCTCGCTCCTGCGTGGAGAAGAGTaGCCCGGCCAGAGCACTGGTCACCTGCTTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLHGSSLLRGEE*PGQSTGHLLVF Trigger: GAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CAA 90 bp | TCCTGCGTGGAGAAGAGTTGCCCGGCCAGAGCACTGGTCACCTGCTaGTCTTCATGGAAGGATGTAGGCCAGTGGGCTCGTGCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SCVEKSCPARALVTC*SSWKDVGQWARASS Trigger: TGAGGAGGCACGAGCCCACTGGCCTACATCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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| CDS CCA 72 bp | TGGTCCTCGAGAATACCGCGGAACACCTGGAAGCGGTaGTTGAGGTCTGGCCGAGCATGGACACGGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: WSSRIPRNTWKR*LRSGRAWTRKS Trigger: ACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGACCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 72 bp | TCCTCGAGAATACCGCGGAACACCTGGAAGCGGTGGTaGAGGTCTGGCCGAGCATGGACACGGAAGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSRIPRNTWKRW*RSGRAWTRKSV Trigger: CACACTCTTCCGTGTCCATGCTCGGCCAGACCTCAACCACCGCTTCCAGGTGTTCCGCGGTATTCTCGAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038411.5 |
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| CDS CAA 90 bp | TTCCATGTGGGTTTGCATGGCAGCTCGCTCCTGCGTGGAGAAGAGTaGCCCGGCCAGAGCACTGGTCACCTGCTTGTCTTCATGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: FHVGLHGSSLLRGEE*PGQSTGHLLVFMEG Trigger: TCCTTCCATGAAGACAAGCAGGTGACCAGTGCTCTGGCCGGGCAACTCTTCTCCACGCAGGAGCGAGCTGCCATGCAAACCCACATGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038411.5 ENSMUST00000221960.2 |
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