Pregenerated sensors for ADAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019808Ensembl transcript IDs: ENSMUST00000019944.9
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACATGAATTATCGAGGCAATATCTCTCATTTGACCCCAGAGCTTaGTTTGGGATCTCGGAAGCCCATCTCTGTTTTCCAAGCACTGGA | + |
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Preference number: 1 (lower is better) Translates to: SHELSRQYLSFDPRA*FGISEAHLCFPSTG Trigger: TCCAGTGCTTGGAAAACAGAGATGGGCTTCCGAGATCCCAAAGCAAGCTCTGGGGTCAAATGAGAGATATTGCCTCGATAATTCATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CAA 90 bp | CACCAAACCACCCACCTGGCACTGATGGGGACCCAATCCTCATGGTaGCATGGCAAGCATTTCACCACTTGGCCCTCTTCACAGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: HQTTHLALMGTQSSW*HGKHFTTWPSSQPQ Trigger: TTGTGGCTGTGAAGAGGGCCAAGTGGTGAAATGCTTGCCATGCAACCATGAGGATTGGGTCCCCATCAGTGCCAGGTGGGTGGTTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTTGGGATCTCGGAAGCCCATCTCTGTTTTCCAAGCACTGGAATCACAGGATCCTCATGGTTGCATaGCAAGCATTTCACCACTTG | + |
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Preference number: 2 (lower is better) Translates to: LLWDLGSPSLFSKHWNHRILMVA*QAFHHL Trigger: CAAGTGGTGAAATGCTTGCCATGCAACCATGAGGAT...CCTGTGATTCCAGTGCTTGGAAAACAGAGATGGGCTTCCGAGATCCCAAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR GCA 72 bp | CCAGAGCTAACTGAGGCTGTGGGTGAAGGGCGGCGCTaGTTGCGGATCTCTGGGACCTCAACCTTAATCCCG | + |
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Preference number: 3 (lower is better) Translates to: PELTEAVGEGRR*LRISGTSTLIP Trigger: CGGGATTAAGGTTGAGGTCCCAGAGATCCGCAAGCAGCGCCGCCCTTCACCCACAGCCTCAGTTAGCTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CCA 72 bp | ACCACCCACCTGGCACTGATGGGGACCCAATCCTCATaGTTGCATGGCAAGCATTTCACCACTTGGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: TTHLALMGTQSS*LHGKHFTTWPS Trigger: AGAGGGCCAAGTGGTGAAATGCTTGCCATGCAACCATGAGGATTGGGTCCCCATCAGTGCCAGGTGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CCA 72 bp | ATCCCGCCCCTTCCTGGAAATAGTCTTTCAGCTTGGTaGAAGAGCTCACGGTTGTTTACATTGCCAGACATT | + |
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Preference number: 3 (lower is better) Translates to: IPPLPGNSLSAW*KSSRLFTLPDI Trigger: AATGTCTGGCAATGTAAACAACCGTGAGCTCTTCCACCAAGCTGAAAGACTATTTCCAGGAAGGGGCGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR GCA 72 bp | TTATCGAGGCAATATCTCTCATTTGACCCCAGAGCTTaGTTTGGGATCTCGGAAGCCCATCTCTGTTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LSRQYLSFDPRA*FGISEAHLCFP Trigger: TGGAAAACAGAGATGGGCTTCCGAGATCCCAAAGCAAGCTCTGGGGTCAAATGAGAGATATTGCCTCGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CCA 72 bp | CAATCCTCATGGTTGCATGGCAAGCATTTCACCACTTaGCCCTCTTCACAGCCACAAAAAGCTTCATTAAGC | + |
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Preference number: 3 (lower is better) Translates to: QSSWLHGKHFTT*PSSQPQKASLS Trigger: GCTTAATGAAGCTTTTTGTGGCTGTGAAGAGGGCCAAGTGGTGAAATGCTTGCCATGCAACCATGAGGATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CAA 72 bp | GAGCTAACTGAGGCTGTGGGTGAAGGGCGGCGCTGCTaGCGGATCTCTGGGACCTCAACCTTAATCCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ELTEAVGEGRRC*RISGTSTLIPP Trigger: GGGCGGGATTAAGGTTGAGGTCCCAGAGATCCGCAAGCAGCGCCGCCCTTCACCCACAGCCTCAGTTAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR TCA 90 bp | TTGGGATCTCGGAAGCCCATCTCTGTTTTCCAAGCACTGGAATCACAGGCAGGCTGCACGGCTCCACAGTaGCGTACAACACGGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LGSRKPISVFQALESQAGCTAPQ*RTTRCA Trigger: AGCACACCGTGTTGTACGTCACTGTGGAGCCGTGCA...GCCTGCCTGTGATTCCAGTGCTTGGAAAACAGAGATGGGCTTCCGAGATCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CAA 72 bp | ACCCACCTGGCACTGATGGGGACCCAATCCTCATGGTaGCATGGCAAGCATTTCACCACTTGGCCCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: THLALMGTQSSW*HGKHFTTWPSS Trigger: TGAAGAGGGCCAAGTGGTGAAATGCTTGCCATGCAACCATGAGGATTGGGTCCCCATCAGTGCCAGGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CAA 72 bp | CGAGGCAATATCTCTCATTTGACCCCAGAGCTTGCTTaGGGATCTCGGAAGCCCATCTCTGTTTTCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGNISHLTPELA*GSRKPISVFQA Trigger: TGCTTGGAAAACAGAGATGGGCTTCCGAGATCCCAAAGCAAGCTCTGGGGTCAAATGAGAGATATTGCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR GCA 90 bp | GAAATAGTCTTTCAGCTTGGTGGAAGAGCTCACGGTTGTTTACATTGCCAGACACTCGGTACCCAGGGATaGACTGAAACGGTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EIVFQLGGRAHGCLHCQTLGTQG*TETVFQ Trigger: CTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAG...TGTCTGGCAATGTAAACAACCGTGAGCTCTTCCACCAAGCTGAAAGACTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| 3UTR CAA 72 bp | TCTCTTCACATGAATTATCGAGGCAATATCTCTCATTaGACCCCAGAGCTTGCTTTGGGATCTCGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLHMNYRGNISH*TPELALGSRKP Trigger: GGGCTTCCGAGATCCCAAAGCAAGCTCTGGGGTCAAATGAGAGATATTGCCTCGATAATTCATGTGAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR TCA 90 bp | TTTGTTCCTTTAACAGAGCAAATGACGAGCGACACCATTTTTACACACAGTAATTACCCAGGGATGCACTaGAACGGTCTTCCAGTATTG | + |
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Preference number: 4 (lower is better) Translates to: FVPLTEQMTSDTIFTHSNYPGMH*NGLPVL Trigger: CAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTA...ATTACTGTGTGTAAAAATGGTGTCGCTCGTCATTTGCTCTGTTAAAGGAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS GCA 90 bp | AGGTCTTTAGGAGCTCCACAGCCTCCTCAGCTCGGTACCCAGGGATaGACTGAAACGGTCTTCCAGTATTGGGTAGGTCAGCAGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: RSLGAPQPPQLGTQG*TETVFQYWVGQQRQ Trigger: TTGCCTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAGCTGAGGAGGCTGTGGAGCTCCTAAAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS CCA 90 bp | CCTCAGCTCGGTACCCAGGGATGCACTGAAACGGTCTTCCAGTATTaGGTAGGTCAGCAGAGGCAATGTTTAGGACGGAACCGCAACCAC | + |
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Preference number: 5 (lower is better) Translates to: PQLGTQGCTETVFQY*VGQQRQCLGRNRNH Trigger: GTGGTTGCGGTTCCGTCCTAAACATTGCCTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR CAA 90 bp | GGGCGGCGCTGCTTGCGGATCTCTGGGACCTCAACCTTAATCCCGCCCCTTCCTTTGATTTTGGCGCATTaGGGTTCTCCTGTTTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: GRRCLRISGTSTLIPPLPLILAH*GSPVCR Trigger: TCTACAAACAGGAGAACCCAAATGCGCCAAAATCAA...AGGAAGGGGCGGGATTAAGGTTGAGGTCCCAGAGATCCGCAAGCAGCGCCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR CAA 90 bp | GCGGCGCTGCTTGCGGATCTCTGGGACCTCAACCTTAATCCCGCCCCTTCCTGGCCTTTTTCCGAACTTTaGATTTTGGCGCATTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: AALLADLWDLNLNPAPSWPFSEL*ILAHLG Trigger: ACCCAAATGCGCCAAAATCAAAAGTTCGGAAAAAGG...CCAGGAAGGGGCGGGATTAAGGTTGAGGTCCCAGAGATCCGCAAGCAGCGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS TCA 90 bp | TTTAGGAGCTCCACAGCCTCCTCAGCTCGGTACCCAGGGATGCACTaGAACGGTCTTCCAGTATTGGGTAGGTCAGCAGAGGCAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: FRSSTASSARYPGMH*NGLPVLGRSAEAMF Trigger: AAACATTGCCTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAGCTGAGGAGGCTGTGGAGCTCCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS-3UTR CAA 90 bp | AGGCAATATCTCTCATTTGACCCCAGAGCTTGCTTTGGGATCTCGGAAGCCCATAACGGTCTTCCAGTATaGGGTAGGTCAGCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RQYLSFDPRACFGISEAHNGLPV*GRSAEA Trigger: TGCCTCTGCTGACCTACCCAATACTGGAAGACCGTT...ATGGGCTTCCGAGATCCCAAAGCAAGCTCTGGGGTCAAATGAGAGATATTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS TCA 72 bp | TCCACAGCCTCCTCAGCTCGGTACCCAGGGATGCACTaGAACGGTCTTCCAGTATTGGGTAGGTCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: STASSARYPGMH*NGLPVLGRSAE Trigger: CTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACCGAGCTGAGGAGGCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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| CDS CCA 72 bp | GGTACCCAGGGATGCACTGAAACGGTCTTCCAGTATTaGGTAGGTCAGCAGAGGCAATGTTTAGGACGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GTQGCTETVFQY*VGQQRQCLGRN Trigger: GTTCCGTCCTAAACATTGCCTCTGCTGACCTACCCAATACTGGAAGACCGTTTCAGTGCATCCCTGGGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019944.9 |
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