Pregenerated sensors for ADAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020709Ensembl transcript IDs: ENSMUST00000021050.14, ENSMUST00000134118.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGTTGTCACTGGGCTCATGGCACCCTCGCCTCTTGCCTGGCATaGGTCACCATGGCCAGCTCTTGGTGCAGTTATGAGGAACCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PGCHWAHGTLASCLA*VTMASSWCSYEEPF Trigger: GAAGGGTTCCTCATAACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGAGGCGAGGGTGCCATGAGCCCAGTGACAACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR GCA 90 bp | CAGTGTAGTCCAGGTTGTCACTGGGCTCATGGCACCCTCGCCTCTTaGCTGGCATGCGTCACCATGGCCAGCTCTTGGTGCAGTTATGAG | + |
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Preference number: 1 (lower is better) Translates to: QCSPGCHWAHGTLAS*LACVTMASSWCSYE Trigger: CTCATAACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGAGGCGAGGGTGCCATGAGCCCAGTGACAACCTGGACTACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 90 bp | AGTTTGCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTaGAGTTCACTAGTGGGGCAGCTGCTGGCCTCAGGGCTTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SLLEGARGVVGSTTP*SSLVGQLLASGLPS Trigger: AGAAGGAAGCCCTGAGGCCAGCAGCTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGCAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 90 bp | GTAGTCCAGGTTGTCACTGGGCTCATGGCACCCTCGCCTCTTGCCTaGCATGCGTCACCATGGCCAGCTCTTGGTGCAGTTATGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: VVQVVTGLMAPSPLA*HASPWPALGAVMRN Trigger: GTTCCTCATAACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGAGGCGAGGGTGCCATGAGCCCAGTGACAACCTGGACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR TCA 90 bp | CAGCTGCTGGCCTCAGGGCTTCCTTCTGGACAACTAGGGCTGAGGTaGACACTTCTCCAGAACTTCAGATGCACAGTAGCCAGCCAGATC | + |
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Preference number: 1 (lower is better) Translates to: QLLASGLPSGQLGLR*TLLQNFRCTVASQI Trigger: GATCTGGCTGGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCTGAGGCCAGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 90 bp | CTGGAGTTCACTAGTGGGGCAGCTGCTGGCCTCAGGGCTTCCTTCTaGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGATG | + |
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Preference number: 1 (lower is better) Translates to: LEFTSGAAAGLRASF*TTRAEVNTSPELQM Trigger: CATCTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCTGAGGCCAGCAGCTGCCCCACTAGTGAACTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR TCA 90 bp | TTAGTTTTTCTAGACAGGGTTTCTCAGTGTAACCTGCCCTGGCTGTaGCTGTCCCAGATCTGCCAGTCTCTGCCTCCTGAGTGCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LVFLDRVSQCNLPWL*LSQICQSLPPECCF Trigger: AAAACAGCACTCAGGAGGCAGAGACTGGCAGATCTGGGACAGTCACAGCCAGGGCAGGTTACACTGAGAAACCCTGTCTAGAAAAACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR-3UTR CCA 90 bp | CCATACCAGCTCCTCAAGACTGAGGAGAGTTTGCTGGAAGGAGCACGGGGAGTCCTCAGGGCTTCCTTCTaGACAACTAGGGCTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PYQLLKTEESLLEGARGVLRASF*TTRAEV Trigger: CACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCTGAG...GACTCCCCGTGCTCCTTCCAGCAAACTCTCCTCAGTCTTGAGGAGCTGGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR-3UTR TCA 90 bp | TCTGAGACAAGGTCTTGCTATGTAACTCAGGCTGAACTGAACCCCCAGTGTAGTCTCTTGGTGCAGTTATaGGGAACCCTTCAGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SETRSCYVTQAELNPQCSLLVQL*GTLQDF Trigger: GAAGTCCTGAAGGGTTCCTCATAACTGCACCAAGAG...ACTACACTGGGGGTTCAGTTCAGCCTGAGTTACATAGCAAGACCTTGTCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 72 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTaGAGTTCACTAGTGGGGCAGCTGCTGGCCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: EGARGVVGSTTP*SSLVGQLLASG Trigger: CCCTGAGGCCAGCAGCTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 72 bp | GTTGTCACTGGGCTCATGGCACCCTCGCCTCTTGCCTaGCATGCGTCACCATGGCCAGCTCTTGGTGCAGTT | + |
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Preference number: 3 (lower is better) Translates to: VVTGLMAPSPLA*HASPWPALGAV Trigger: AACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGAGGCGAGGGTGCCATGAGCCCAGTGACAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR CCA 72 bp | ATGGCACCCTCGCCTCTTGCCTGGCATGCGTCACCATaGCCAGCTCTTGGTGCAGTTATGAGGAACCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: MAPSPLAWHASP*PALGAVMRNPS Trigger: TGAAGGGTTCCTCATAACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGAGGCGAGGGTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR TCA 72 bp | GCCTCAGGGCTTCCTTCTGGACAACTAGGGCTGAGGTaGACACTTCTCCAGAACTTCAGATGCACAGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: ASGLPSGQLGLR*TLLQNFRCTVA Trigger: GGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| 3UTR GCA 72 bp | TCTTGCCTGGCATGCGTCACCATGGCCAGCTCTTGGTaGAGTTATGAGGAACCCTTCAGGACTTCTAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SCLACVTMASSW*SYEEPFRTSKL Trigger: AAGCTTAGAAGTCCTGAAGGGTTCCTCATAACTGCACCAAGAGCTGGCCATGGTGACGCATGCCAGGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | CTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGCCGGTGCCCGCAGCCTaGAGCAGCTCCAGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LEGARGVVGSTTPWSSLVPVPAA*SSSSSR Trigger: GCGGCTGCTGGAGCTGCTGCAGGCTGCGGGCACCGG...CACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | CTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGCCGCAGTCGGCGCAGTaGCCGTTGCCGGTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LEGARGVVGSTTPWSSLVPQSAQ*PLPVPA Trigger: TGCGGGCACCGGCAACGGGCACTGCGCCGACTGCGG...CACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | GGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGCAGACAGCCAGTCTCTGCTaGTGTGGTGAGGAGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GARGVVGSTTPWSSLVGQTASLC*CGEEVE Trigger: CTCCACCTCCTCACCACATCAGCAGAGACTGGCTGT...CTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGCAGTCTGGGAAGTTGCGGTaGACGCCAGAGCAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GARGVVGSTTPWSSLVGQSGKLR*TPEQWR Trigger: TCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGA...CTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | GCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGAGGAGGTGGAGGGGTaGCAAGGGACTGGACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: AGRSTGSRRINHTLEFTSEEVEG*QGTGQD Trigger: GTCTTGTCCAGTCCCTTGTCACCCCTCCACCTCCTC...ACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | TGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACACCGGTGCCCGCAGCCTaGAGCAGCTCCAGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CPIFSVWKVAFKSLMLMTPVPAA*SSSSSR Trigger: GCGGCTGCTGGAGCTGCTGCAGGCTGCGGGCACCGG...TGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR GCA 90 bp | TGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACACCGCAGTCGGCGCAGTaGCCGTTGCCGGTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: CPIFSVWKVAFKSLMLMTPQSAQ*PLPVPA Trigger: TGCGGGCACCGGCAACGGGCACTGCGCCGACTGCGG...TGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGTGGACGCCAGAGCAGTaGAGACAGATGAAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: EGARGVVGSTTPWSSLVGWTPEQ*RQMKIP Trigger: GGGGATTTTCATCTGTCTCCACTGCTCTGGCGTCCA...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGAACTTTGCTGATGTCTaGGAAGTTGCGGTGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: EGARGVVGSTTPWSSLVGNFADV*EVAVDA Trigger: GGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTT...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGTCCCTCGGATGCCCTTaGGCAGATCTTCCCATACTT | + |
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Preference number: 4 (lower is better) Translates to: EGARGVVGSTTPWSSLVGSLGCP*ADLPIL Trigger: AAGTATGGGAAGATCTGCCCAAGGGCATCCGAGGGA...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGACTTGGCTTTCACGTTaGGGTTCCCATGGTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EGARGVVGSTTPWSSLVGTWLSR*GSHGES Trigger: TGACTCACCATGGGAACCTCAACGTGAAAGCCAAGT...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTAGACCAGGCAGTCGTTaGCCTGAGGGACATAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: AGRSTGSRRINHTLEFTSRPGSR*PEGHSR Trigger: TCTACTATGTCCCTCAGGCCAACGACTGCCTGGTCT...ACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGTGATCTGCAGCCCGTaGGGATGTCCTATCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LEGARGVVGSTTPWSSLVVICSP*GCPIFS Trigger: AGAGAAGATAGGACATCCCCACGGGCTGCAGATCAC...CACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGCAGAAACAAACAGGTTCCTaGTGTGGCCCTCTTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GARGVVGSTTPWSSLVGQKQTGS*CGPLSC Trigger: ACAGGAAAGAGGGCCACACCAGGAACCTGTTTGTTT...CTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | AGGGCTGAGGTGAACACTTCTCCAGAACTTCAGATGCACAGTAGCCAGCCAGATGCCAATTTCAGGTATTaGAGGCGGGCTGCACGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RAEVNTSPELQMHSSQPDANFRY*RRAARR Trigger: TCTCCGTGCAGCCCGCCTGCAATACCTGAAATTGGC...ATCTGGCTGGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | CTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGCATATCCCTGCTCATTaGTTCCCAGAAAAACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LEGARGVVGSTTPWSSLVHIPAH*FPEKPG Trigger: GCCAGGTTTTTCTGGGAAGCAATGAGCAGGGATATG...CACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTCCTATCTTCTCTGTCTaGAAGGTGGCGTTTAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: AGRSTGSRRINHTLEFTSPIFSV*KVAFKS Trigger: GGACTTAAACGCCACCTTCCAGACAGAGAAGATAGG...ACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR GCA 90 bp | GGAGAGCTGAATTCTTCTCCATACCAGCTCCTCAAGACTGAGGAGAGTTTGCTGGTATTGCAGGCGGGCTaGACGGAGAGCATTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: GELNSSPYQLLKTEESLLVLQAG*TESIEP Trigger: TGGTTCAATGCTCTCCGTGCAGCCCGCCTGCAATAC...CAGCAAACTCTCCTCAGTCTTGAGGAGCTGGTATGGAGAAGAATTCAGCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | CTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGTTCTCTATGCTTTaGACCAGTCTTCTCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: LEGARGVVGSTTPWSSLVGFSML*TSLLHE Trigger: TTCATGGAGAAGACTGGTCCAAAGCATAGAGAACCC...CACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | AGTTATGAGGAACCCTTCAGGACTTCTAAGCTTGGAGAGCTGAATTCTTCTCCAGGGGTGACAAGGGACTaGACAAGACGCCCCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SYEEPFRTSKLGELNSSPGVTRD*TRRPAD Trigger: GTCTGCGGGGCGTCTTGTCCAGTCCCTTGTCACCCC...TGGAGAAGAATTCAGCTCTCCAAGCTTAGAAGTCCTGAAGGGTTCCTCATAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | TTTCCTGTAGGTGATCTGCAGCCCGTGGGGATGTCCTATCTTCTCTGTCTGGAAACTTGGCTTTCACGTTaGGGTTCCCATGGTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: FPVGDLQPVGMSYLLCLETWLSR*GSHGES Trigger: TGACTCACCATGGGAACCTCAACGTGAAAGCCAAGT...TTCCAGACAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR TCA 90 bp | AGGGCTTCCTTCTGGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGCTGCACGGAGAGCATTaGACCAATCCACTATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RASFWTTRAEVNTSPELQLHGEH*TNPLSP Trigger: AGGAGATAGTGGATTGGTTCAATGCTCTCCGTGCAG...CTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | CCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACAGCCTGGACGCCAGAGCAGTaGAGACAGATGAAAATCCCC | + |
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Preference number: 4 (lower is better) Translates to: PIFSVWKVAFKSLMLMTAWTPEQ*RQMKIP Trigger: GGGGATTTTCATCTGTCTCCACTGCTCTGGCGTCCA...GGCTGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACATCTGGGAAGTTGCGGTaGACGCCAGAGCAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CPIFSVWKVAFKSLMLMTSGKLR*TPEQWR Trigger: TCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGA...TGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CCA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGGACATAGTAGAAAGCTaGGACTCTTGCTTCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: EGARGVVGSTTPWSSLVGDIVES*DSCFKL Trigger: AAGTTTGAAGCAAGAGTCCCAGCTTTCTACTATGTC...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | AGGGCTTCCTTCTGGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGCTTTACCCTCCTCCTTaGTGTAGTACTTCAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RASFWTTRAEVNTSPELQLYPPP*CSTSGG Trigger: GCCTCCTGAAGTACTACACCAAGGAGGAGGGTAAAG...CTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GGAGAGCTGAATTCTTCTCCATACCAGCTCCTCAAGACTGAGGAGAGTTTGCTGCACGAGCTCAGACTCTaGGAGATCAGGAAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GELNSSPYQLLKTEESLLHELRL*EIRKGQ Trigger: TTGGCCTTTCCTGATCTCCCAGAGTCTGAGCTCGTG...CAGCAAACTCTCCTCAGTCTTGAGGAGCTGGTATGGAGAAGAATTCAGCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | AGGGCTTCCTTCTGGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGAGCAGTGGAGACAGATaGAAATCCCCAGCTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: RASFWTTRAEVNTSPELQSSGDR*KSPACK Trigger: CTTACAAGCTGGGGATTTTCATCTGTCTCCACTGCT...CTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | CCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACAGCCTCCCATGGTGAGTCATaGACTCCACCATACTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: PIFSVWKVAFKSLMLMTASHGES*TPPYCR Trigger: ACGACAGTATGGTGGAGTTCATGACTCACCATGGGA...GGCTGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR GCA 90 bp | GCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTCATACTTCATATCCCTaGTCATTGCTTCCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: AGRSTGSRRINHTLEFTSHTSYP*SLLPRK Trigger: TTTTCTGGGAAGCAATGAGCAGGGATATGAAGTATG...ACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CCA 90 bp | GGATGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGAGACCAGGCAGTCGTTaGCCTGAGGGACATAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: GCPIFSVWKVAFKSLMLMRPGSR*PEGHSR Trigger: TCTACTATGTCCCTCAGGCCAACGACTGCCTGGTCT...CATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR TCA 90 bp | TCTGAGACAAGGTCTTGCTATGTAACTCAGGCTGAACTGAACCCCCAGTGTAGTTCCCATGGTGAGTCATaGACTCCACCATACTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SETRSCYVTQAELNPQCSSHGES*TPPYCR Trigger: ACGACAGTATGGTGGAGTTCATGACTCACCATGGGA...ACTACACTGGGGGTTCAGTTCAGCCTGAGTTACATAGCAAGACCTTGTCTCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR TCA 90 bp | TGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACAAGCAGTGGAGACAGATaGAAATCCCCAGCTTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: CPIFSVWKVAFKSLMLMTSSGDR*KSPACK Trigger: CTTACAAGCTGGGGATTTTCATCTGTCTCCACTGCT...TGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CCA 90 bp | TTTCCTGTAGGTGATCTGCAGCCCGTGGGGATGTCCTATCTTCTCTGTCTGGAAGACATAGTAGAAAGCTaGGACTCTTGCTTCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: FPVGDLQPVGMSYLLCLEDIVES*DSCFKL Trigger: AAGTTTGAAGCAAGAGTCCCAGCTTTCTACTATGTC...TTCCAGACAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR TCA 90 bp | AGTTATGAGGAACCCTTCAGGACTTCTAAGCTTGGAGAGCTGAATTCTTCTCCATTGAGGTTCCCATGGTaGGTCATGAACTCCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: SYEEPFRTSKLGELNSSPLRFPW*VMNSTI Trigger: TATGGTGGAGTTCATGACTCACCATGGGAACCTCAA...TGGAGAAGAATTCAGCTCTCCAAGCTTAGAAGTCCTGAAGGGTTCCTCATAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS GCA 90 bp | GCTGCCCCGCAGTCGGCGCAGTGCCCGTTGCCGGTGCCCGCAGCCTaGAGCAGCTCCAGCAGCCGCTTCTTGTTGCGCTCGCGGTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: AAPQSAQCPLPVPAA*SSSSSRFLLRSRSP Trigger: GGGCGACCGCGAGCGCAACAAGAAGCGGCTGCTGGAGCTGCTGCAGGCTGCGGGCACCGGCAACGGGCACTGCGCCGACTGCGGGGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS-3UTR CAA 90 bp | AACACTTCTCCAGAACTTCAGATGCACAGTAGCCAGCCAGATCCTCCGAGATGGTCGGCGCAGTGCCCGTaGCCGGTGCCCGCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTSPELQMHSSQPDPPRWSAQCP*PVPAAC Trigger: GCAGGCTGCGGGCACCGGCAACGGGCACTGCGCCGA...CCATCTCGGAGGATCTGGCTGGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | CCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACAGCCTCGGCGCAGTGCCCGTaGCCGGTGCCCGCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIFSVWKVAFKSLMLMTASAQCP*PVPAAC Trigger: GCAGGCTGCGGGCACCGGCAACGGGCACTGCGCCGA...GGCTGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CAA 90 bp | GGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGCAGCTGATGTCTGGGAAGTaGCGGTGGACGCCAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GARGVVGSTTPWSSLVGQLMSGK*RWTPEQ Trigger: CTGCTCTGGCGTCCACCGCAACTTCCCAGACATCAG...CTGCCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGGGCCAATTTCAGGTATaGCAGGCGGGCTGCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGARGVVGSTTPWSSLVGGQFQV*QAGCTE Trigger: CTCCGTGCAGCCCGCCTGCAATACCTGAAATTGGCC...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS GCA 90 bp | GAGGCCTTCCCTCGACAGAAGGACAAACCGCCTTCTCAGGAACTGTaGGTTGTCCCGTCCTCGCTTCCACAGGAACCCTTCTCGGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: EAFPRQKDKPPSQEL*VVPSSLPQEPFSVT Trigger: GGTAACCGAGAAGGGTTCCTGTGGAAGCGAGGACGGGACAACGCACAGTTCCTGAGAAGGCGGTTTGTCCTTCTGTCGAGGGAAGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | AGGGCTTCCTTCTGGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGTCCAGCAGCCGCTTCTaGTTGCGCTCGCGGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RASFWTTRAEVNTSPELQSSSRF*LRSRSP Trigger: GGGCGACCGCGAGCGCAACAAGAAGCGGCTGCTGGA...CTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | TTTCCTGTAGGTGATCTGCAGCCCGTGGGGATGTCCTATCTTCTCTGTCTGGAATCCAGCAGCCGCTTCTaGTTGCGCTCGCGGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPVGDLQPVGMSYLLCLESSSRF*LRSRSP Trigger: GGGCGACCGCGAGCGCAACAAGAAGCGGCTGCTGGA...TTCCAGACAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS-3UTR CAA 90 bp | GCTGGAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTCTCAGGAACTGTGCGTaGTCCCGTCCTCGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGRSTGSRRINHTLEFTSLRNCA*SRPRFH Trigger: GTGGAAGCGAGGACGGGACAACGCACAGTTCCTGAG...ACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | GAAGGAGCACGGGGAGTCGTAGGATCAACCACACCCTGGAGTTCACTAGTGGGGTTCCCTCGGATGCCCTaGGGCAGATCTTCCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: EGARGVVGSTTPWSSLVGFPRMP*GRSSHT Trigger: AGTATGGGAAGATCTGCCCAAGGGCATCCGAGGGAA...CCCCACTAGTGAACTCCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS TCA 90 bp | CATGATAAACAAACAGGTTCCTGGTGTGGCCCTCTTTCCTGTAGGTaGTCTGCAGCCCGTGGGGATGTCCTATCTTCTCTGTCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HDKQTGSWCGPLSCR*SAARGDVLSSLSGR Trigger: CCTTCCAGACAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGGAAAGAGGGCCACACCAGGAACCTGTTTGTTTATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS GCA 90 bp | TTCCCTCGGATGCCCTTGGGCAGATCTTCCCATACTTCATATCCCTaGTCATTGCTTCCCAGAAAAACCTGGCCCAGCTCAAAAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FPRMPLGRSSHTSYP*SLLPRKTWPSSKAS Trigger: GGATGCTTTTGAGCTGGGCCAGGTTTTTCTGGGAAGCAATGAGCAGGGATATGAAGTATGGGAAGATCTGCCCAAGGGCATCCGAGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | CCATACCAGCTCCTCAAGACTGAGGAGAGTTTGCTGGAAGGAGCACGGGGAGTCCTCACGGATTTAACTTaGCTGATGTCTGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PYQLLKTEESLLEGARGVLTDLT*LMSGKL Trigger: CAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAG...GACTCCCCGTGCTCCTTCCAGCAAACTCTCCTCAGTCTTGAGGAGCTGGTATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | AGGGCTTCCTTCTGGACAACTAGGGCTGAGGTGAACACTTCTCCAGAACTTCAGGCTGCACGGAGAGCATaGAACCAATCCACTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASFWTTRAEVNTSPELQAARRA*NQSTIS Trigger: GGAGATAGTGGATTGGTTCAATGCTCTCCGTGCAGC...CTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCTAGTTGTCCAGAAGGAAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS TCA 90 bp | GGGACTCTTGCTTCAAACTTGGCTTTCACGTTGAGGTTCCCATGGTaGGTCATGAACTCCACCATACTGTCGTCCCAGAAGTCCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLASNLAFTLRFPW*VMNSTILSSQKSSL Trigger: GAGACTGGACTTCTGGGACGACAGTATGGTGGAGTTCATGACTCACCATGGGAACCTCAACGTGAAAGCCAAGTTTGAAGCAAGAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS GCA 90 bp | CAGGCAGTCGTTGGCCTGAGGGACATAGTAGAAAGCTGGGACTCTTaGTTCAAACTTGGCTTTCACGTTGAGGTTCCCATGGTGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAVVGLRDIVESWDS*FKLGFHVEVPMVSH Trigger: ATGACTCACCATGGGAACCTCAACGTGAAAGCCAAGTTTGAAGCAAGAGTCCCAGCTTTCTACTATGTCCCTCAGGCCAACGACTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CCA 90 bp | GTCGTCCCAGAAGTCCAGTCTCACGGATTTAACTTTGCTGATGTCTaGGAAGTTGCGGTGGACGCCAGAGCAGTGGAGACAGATGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVPEVQSHGFNFADV*EVAVDARAVETDEN Trigger: ATTTTCATCTGTCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAGACTGGACTTCTGGGACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS-3UTR CAA 90 bp | CCTGTAGGTGATCTGCAGCCCGTGGGGATGTCCTATCTTCTCTGTCTGGAAGGTCTCACGGATTTAACTTaGCTGATGTCTGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVGDLQPVGMSYLLCLEGLTDLT*LMSGKL Trigger: CAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAG...ACCTTCCAGACAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS TCA 90 bp | GTCCCGTCCTCGCTTCCACAGGAACCCTTCTCGGTTACCTGGATGTaGGACAGCTTTGTCAATAGCCGTAAACTCCTGTCTTTCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: VPSSLPQEPFSVTWM*DSFVNSRKLLSFIL Trigger: AAGTATGAAAGACAGGAGTTTACGGCTATTGACAAAGCTGTCTCACATCCAGGTAACCGAGAAGGGTTCCTGTGGAAGCGAGGACGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | AGGGCTGAGGTGAACACTTCTCCAGAACTTCAGATGCACAGTAGCCAGCCAGATGTGGCGTTTAAGTCCTaGATGCTGATGACAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAEVNTSPELQMHSSQPDVAFKS*MLMTAF Trigger: AAAGGCTGTCATCAGCATCAAGGACTTAAACGCCAC...ATCTGGCTGGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTTCACCTCAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | AACACTTCTCCAGAACTTCAGATGCACAGTAGCCAGCCAGATCCTCCGAGATGGAGAAAGCTGGGACTCTaGCTTCAAACTTGGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTSPELQMHSSQPDPPRWRKLGL*LQTWLS Trigger: TGAAAGCCAAGTTTGAAGCAAGAGTCCCAGCTTTCT...CCATCTCGGAGGATCTGGCTGGCTACTGTGCATCTGAAGTTCTGGAGAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | GGAGAGCTGAATTCTTCTCCATACCAGCTCCTCAAGACTGAGGAGAGTTTGCTGTCATATCCCTGCTCATaGCTTCCCAGAAAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GELNSSPYQLLKTEESLLSYPCS*LPRKTW Trigger: CCAGGTTTTTCTGGGAAGCAATGAGCAGGGATATGA...CAGCAAACTCTCCTCAGTCTTGAGGAGCTGGTATGGAGAAGAATTCAGCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS TCA 90 bp | GAAAGGCCAATTTCAGGTATTGCAGGCGGGCTGCACGGAGAGCATTaGACCAATCCACTATCTCCTTCCCACTGTCATGATAAACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ERPISGIAGGLHGEH*TNPLSPSHCHDKQT Trigger: TGTTTGTTTATCATGACAGTGGGAAGGAGATAGTGGATTGGTTCAATGCTCTCCGTGCAGCCCGCCTGCAATACCTGAAATTGGCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS-3UTR CAA 90 bp | TGTCCTATCTTCTCTGTCTGGAAGGTGGCGTTTAAGTCCTTGATGCTGATGACAAGAAAGCTGGGACTCTaGCTTCAAACTTGGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPIFSVWKVAFKSLMLMTRKLGL*LQTWLS Trigger: TGAAAGCCAAGTTTGAAGCAAGAGTCCCAGCTTTCT...TGTCATCAGCATCAAGGACTTAAACGCCACCTTCCAGACAGAGAAGATAGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134118.2 |
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| CDS GCA 72 bp | CAGGATCCGCTGCCCCGCAGTCGGCGCAGTGCCCGTTaGCGGTGCCCGCAGCCTGCAGCAGCTCCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QDPLPRSRRSAR*RCPQPAAAPAA Trigger: GGCTGCTGGAGCTGCTGCAGGCTGCGGGCACCGGCAACGGGCACTGCGCCGACTGCGGGGCAGCGGATCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS GCA 72 bp | GCCCAATCAGGATCCGCTGCCCCGCAGTCGGCGCAGTaGCCGTTGCCGGTGCCCGCAGCCTGCAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AQSGSAAPQSAQ*PLPVPAACSSS Trigger: GGAGCTGCTGCAGGCTGCGGGCACCGGCAACGGGCACTGCGCCGACTGCGGGGCAGCGGATCCTGATTGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CAA 90 bp | CCTTCCCTCGACAGAAGGACAAACCGCCTTCTCAGGAACTGTGCGTaGTCCCGTCCTCGCTTCCACAGGAACCCTTCTCGGTTACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLDRRTNRLLRNCA*SRPRFHRNPSRLPG Trigger: TCCAGGTAACCGAGAAGGGTTCCTGTGGAAGCGAGGACGGGACAACGCACAGTTCCTGAGAAGGCGGTTTGTCCTTCTGTCGAGGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS GCA 72 bp | CCTCGACAGAAGGACAAACCGCCTTCTCAGGAACTGTaGGTTGTCCCGTCCTCGCTTCCACAGGAACCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRQKDKPPSQEL*VVPSSLPQEPF Trigger: GAAGGGTTCCTGTGGAAGCGAGGACGGGACAACGCACAGTTCCTGAGAAGGCGGTTTGTCCTTCTGTCGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS CAA 72 bp | GACAGAAGGACAAACCGCCTTCTCAGGAACTGTGCGTaGTCCCGTCCTCGCTTCCACAGGAACCCTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: DRRTNRLLRNCA*SRPRFHRNPSR Trigger: CCGAGAAGGGTTCCTGTGGAAGCGAGGACGGGACAACGCACAGTTCCTGAGAAGGCGGTTTGTCCTTCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS TCA 72 bp | CAAACAGGTTCCTGGTGTGGCCCTCTTTCCTGTAGGTaGTCTGCAGCCCGTGGGGATGTCCTATCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QTGSWCGPLSCR*SAARGDVLSSL Trigger: CAGAGAAGATAGGACATCCCCACGGGCTGCAGATCACCTACAGGAAAGAGGGCCACACCAGGAACCTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS CAA 72 bp | GTAAGTCCAGCCTTCCAGCGGTTCCCTCGGATGCCCTaGGGCAGATCTTCCCATACTTCATATCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSPAFQRFPRMP*GRSSHTSYPCS Trigger: TGAGCAGGGATATGAAGTATGGGAAGATCTGCCCAAGGGCATCCGAGGGAACCGCTGGAAGGCTGGACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS CAA 90 bp | CGGATGCCCTTGGGCAGATCTTCCCATACTTCATATCCCTGCTCATaGCTTCCCAGAAAAACCTGGCCCAGCTCAAAAGCATCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RMPLGRSSHTSYPCS*LPRKTWPSSKASRG Trigger: CCCCCTGGATGCTTTTGAGCTGGGCCAGGTTTTTCTGGGAAGCAATGAGCAGGGATATGAAGTATGGGAAGATCTGCCCAAGGGCATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS CAA 72 bp | CTGTCGTCCCAGAAGTCCAGTCTCACGGATTTAACTTaGCTGATGTCTGGGAAGTTGCGGTGGACGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSQKSSLTDLT*LMSGKLRWTPE Trigger: CTCTGGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAGACTGGACTTCTGGGACGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CAA 90 bp | TCCACCATACTGTCGTCCCAGAAGTCCAGTCTCACGGATTTAACTTaGCTGATGTCTGGGAAGTTGCGGTGGACGCCAGAGCAGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: STILSSQKSSLTDLT*LMSGKLRWTPEQWR Trigger: TCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAGACTGGACTTCTGGGACGACAGTATGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CAA 90 bp | CAGAAGTCCAGTCTCACGGATTTAACTTTGCTGATGTCTGGGAAGTaGCGGTGGACGCCAGAGCAGTGGAGACAGATGAAAATCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QKSSLTDLTLLMSGK*RWTPEQWRQMKIPS Trigger: GCTGGGGATTTTCATCTGTCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTTAAATCCGTGAGACTGGACTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CCA 72 bp | ACGGATTTAACTTTGCTGATGTCTGGGAAGTTGCGGTaGACGCCAGAGCAGTGGAGACAGATGAAAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TDLTLLMSGKLR*TPEQWRQMKIP Trigger: GGGGATTTTCATCTGTCTCCACTGCTCTGGCGTCCACCGCAACTTCCCAGACATCAGCAAAGTTAAATCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CCA 72 bp | CAGGCAGTCGTTGGCCTGAGGGACATAGTAGAAAGCTaGGACTCTTGCTTCAAACTTGGCTTTCACGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QAVVGLRDIVES*DSCFKLGFHVE Trigger: CTCAACGTGAAAGCCAAGTTTGAAGCAAGAGTCCCAGCTTTCTACTATGTCCCTCAGGCCAACGACTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS TCA 72 bp | GCTTCAAACTTGGCTTTCACGTTGAGGTTCCCATGGTaGGTCATGAACTCCACCATACTGTCGTCCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASNLAFTLRFPW*VMNSTILSSQK Trigger: CTTCTGGGACGACAGTATGGTGGAGTTCATGACTCACCATGGGAACCTCAACGTGAAAGCCAAGTTTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
||
| CDS TCA 72 bp | TCGCTTCCACAGGAACCCTTCTCGGTTACCTGGATGTaGGACAGCTTTGTCAATAGCCGTAAACTCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLPQEPFSVTWM*DSFVNSRKLLS Trigger: AGACAGGAGTTTACGGCTATTGACAAAGCTGTCTCACATCCAGGTAACCGAGAAGGGTTCCTGTGGAAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS GCA 72 bp | GTTGGCCTGAGGGACATAGTAGAAAGCTGGGACTCTTaGTTCAAACTTGGCTTTCACGTTGAGGTTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VGLRDIVESWDS*FKLGFHVEVPM Trigger: CATGGGAACCTCAACGTGAAAGCCAAGTTTGAAGCAAGAGTCCCAGCTTTCTACTATGTCCCTCAGGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021050.14 ENSMUST00000134118.2 |
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| CDS CAA 72 bp | CTCCGTTCCTGCGGATCCAAGGCAAACCATCTTTTCTaGAAGGGTTCTCTATGCTTTGGACCAGTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSCGSKANHLF*KGSLCFGPVFS Trigger: GGAGAAGACTGGTCCAAAGCATAGAGAACCCTTCAAGAAAAGATGGTTTGCCTTGGATCCGCAGGAACGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS TCA 72 bp | TCCGTTCCTGCGGATCCAAGGCAAACCATCTTTTCTTaGAGGGTTCTCTATGCTTTGGACCAGTCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVPADPRQTIFS*RVLYALDQSSP Trigger: TGGAGAAGACTGGTCCAAAGCATAGAGAACCCTTCAAGAAAAGATGGTTTGCCTTGGATCCGCAGGAACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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| CDS CAA 72 bp | TTGGGCAGATCTTCCCATACTTCATATCCCTGCTCATaGCTTCCCAGAAAAACCTGGCCCAGCTCAAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LGRSSHTSYPCS*LPRKTWPSSKA Trigger: TGCTTTTGAGCTGGGCCAGGTTTTTCTGGGAAGCAATGAGCAGGGATATGAAGTATGGGAAGATCTGCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021050.14 |
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