Pregenerated sensors for ADAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056413Ensembl transcript IDs: ENSMUST00000110865.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGGGCGCTCCCTGGCTCCCAAGGAAGCCACTACTGGGCTCCATaGACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GGALPGSQGSHYWAP*TAPCRLGFLPVAPA Trigger: GGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCATGGAGCCCAGTAGTGGCTTCCTTGGGAGCCAGGGAGCGCCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 90 bp | TGCGGCACATCCCAGAGTGAGTCCCCAGCAGCCAGGCCAGCCCGCTaGCACAGCTATCCATGGCTGTCCATGGCTGTCCATGGCTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: CGTSQSESPAARPAR*HSYPWLSMAVHGCP Trigger: TGGACAGCCATGGACAGCCATGGACAGCCATGGATAGCTGTGGCAGCGGGCTGGCCTGGCTGCTGGGGACTCACTCTGGGATGTGCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 90 bp | CTGGGCTCCATGCACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTaGCCCAGCCAGCTGTCCCAAGGAGACTGGGGGCCCCAAACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LGSMHSTLQTRFPPG*PSQLSQGDWGPQTG Trigger: ACCTGTTTGGGGCCCCCAGTCTCCTTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCATGGAGCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 90 bp | ACTACTGGCCTGCCAGCAGCAATCAGGGCTGGGGGCAGCCACTCCTaGCCATGGCCGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TTGLPAAIRAGGSHS*PWPPLGLGSHSSRA Trigger: AGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTGCTGGCAGGCCAGTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | AGCAGATGGGGTGGGGCGCTCCCTGGCTCCCAAGGAAGCCACTACTaGGCTCCATGCACAGCACCCTGCAGACTAGGTTTCCTCCCGGTT | + |
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Preference number: 1 (lower is better) Translates to: SRWGGALPGSQGSHY*APCTAPCRLGFLPV Trigger: AACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCATGGAGCCCAGTAGTGGCTTCCTTGGGAGCCAGGGAGCGCCCCACCCCATCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | GGCCTGCCAGCAGCAATCAGGGCTGGGGGCAGCCACTCCTGCCCATaGCCGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GLPAAIRAGGSHSCP*PPLGLGSHSSRAQR Trigger: TCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTGCTGGCAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | TCAGGGCTGGGGGCAGCCACTCCTGCCCATGGCCGCCTCTTGGCTTaGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: SGLGAATPAHGRLLA*ALIHQGLKDCKVRA Trigger: GGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 90 bp | GAAAAACTGTCTATCCAATGGGCTTGCCTGAGCCCCACCTGGCCATaGCTGGGCCACACAAGGAACAGGGTGTGGGCCTGGAGGATGGAC | + |
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Preference number: 1 (lower is better) Translates to: EKLSIQWACLSPTWP*LGHTRNRVWAWRMD Trigger: GTCCATCCTCCAGGCCCACACCCTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGACAGTTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | GGTTCTGAAAAACTGTCTATCCAATGGGCTTGCCTGAGCCCCACCTaGCCATGCCTGGGCCACACAAGGAACAGGGTGTGGGCCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GSEKLSIQWACLSPT*PCLGHTRNRVWAWR Trigger: CCTCCAGGCCCACACCCTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGACAGTTTTTCAGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | TGGCCAGAGGGCAGCAGGGAGATAAATACAGGTAGCTTTAACTACTaGCCTGCCAGCAGCAATCAGGGCTGGGGGCAGCCACTCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: WPEGSREINTGSFNY*PASSNQGWGQPLLP Trigger: GGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTGCTGGCAGGCCAGTAGTTAAAGCTACCTGTATTTATCTCCCTGCTGCCCTCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 90 bp | AGCAATCAGGGCTGGGGGCAGCCACTCCTGCCCATGGCCGCCTCTTaGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SNQGWGQPLLPMAAS*LGLSFIKGSKTVRS Trigger: TGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR TCA 90 bp | AACTTTAATGAGGTTCTGAAAAACTGTCTATCCAATGGGCTTGCCTaGGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: NFNEVLKNCLSNGLA*APPGHAWATQGTGC Trigger: ACACCCTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGACAGTTTTTCAGAACCTCATTAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACGGCACATCCCAGAGTaGGTCCCCAGCAGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSGPEGMGYKAGTAPSWARHIPE*VPSSQA Trigger: GGCCTGGCTGCTGGGGACTCACTCTGGGATGTGCCG...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGAGCCCCACCTGGCCATaGCTGGGCCACACAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTSPTWP*LGHTRN Trigger: GTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCT...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCGGCACATCCCAGAGTGAGTCCCCAGCAGCCAGGCCAGCCCGCTGCCACAACAAGGAACAGGGTGTaGGCCTGGAGGATGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: HAAHPRVSPQQPGQPAATTRNRV*AWRMDS Trigger: GGAGTCCATCCTCCAGGCCCACACCCTGTTCCTTGT...TGTGGCAGCGGGCTGGCCTGGCTGCTGGGGACTCACTCTGGGATGTGCCGCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACCACCTGGCCATGCCTaGGCCACACAAGGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQPPGHA*ATQGTG Trigger: CCCTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCCCAAAAGCAGATGGGCAGCAGGAGAGTGGATaGGTCAGCTGGGCGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTKQGQHRAGHRRPKADGQQESG*VSWAWL Trigger: CAGCCACGCCCAGCTGACCCATCCACTCTCCTGCTG...CCCATCTGCTTTTGGGCGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACTGACCCTTGATCCCTaGCTGACACACAGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQLTLDP*LTHSRC Trigger: GCACCTGCTGTGTGTCAGTCAGGGATCAAGGGTCAG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCATCTATCCAATGGGCTTaGCTGAGCCCCACCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RSGPEGMGYKAGTAPSWASIQWA*LSPTWP Trigger: TGGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGA...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCATGCACAGCACCCTaGAGACTAGGTTTCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: RSGPEGMGYKAGTAPSWAPCTAP*RLGFLP Trigger: CGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCATGG...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCACAGCAGCCCAGCACCAAGTCCTGTCCTGAGGCCAAGATCCCCTCAGGCGGTCCTGCTCAAAGTTaGGAGGCAGGGCTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CPQQPSTKSCPEAKIPSGGPAQS*EAGLPA Trigger: TGCTGGAAGCCCTGCCTCCCAACTTTGAGCAGGACC...GCCTGAGGGGATCTTGGCCTCAGGACAGGACTTGGTGCTGGGCTGCTGTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCCCAAAAGCAGATGGGGTCCATGGCTGTCCATaGCTGTCCACAGCAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VTKQGQHRAGHRRPKADGVHGCP*LSTAAQ Trigger: CTGGGCTGCTGTGGACAGCCATGGACAGCCATGGAC...CCCATCTGCTTTTGGGCGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CAA 90 bp | CAGCAATCAGGGCTGGGGGCAGCCACTCCTGCCCATGGCCGCCTCTaGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QQSGLGAATPAHGRL*AWALIHQGLKDCKV Trigger: GACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCTCCAATGGGCTTGCCTaGGCCCCACCTGGCCATGCC | + |
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Preference number: 2 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGSNGLA*APPGHA Trigger: GGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGGA...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACCCTTGATCCCTGACTaGCACACAGCAGGTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQPLIPD*HTAGAQ Trigger: TTGAGCACCTGCTGTGTGTCAGTCAGGGATCAAGGG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAAATGAGCGTAGAATCCTaGGGCCTCCGGGCTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQMSVES*GLRAFF Trigger: GAAGAAAGCCCGGAGGCCCCAGGATTCTACGCTCAT...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAAGAACAGGGTGTGGGCCTaGAGGATGGACTCCCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: TAPCRLGFLPVAPASCPKNRVWA*RMDSPN Trigger: ATTAGGGGAGTCCATCCTCCAGGCCCACACCCTGTT...CTTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCGGGTGGGGCGCTCCCTaGCTCCCAAGGAAGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGGWGAP*LPRKPL Trigger: TAGTGGCTTCCTTGGGAGCCAGGGAGCGCCCCACCC...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCGGGGCCCCAAACAGGTaGACTCAGGGCCTGTGCACA | + |
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Preference number: 2 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGGAPNR*TQGLCT Trigger: TGTGCACAGGCCCTGAGTCCACCTGTTTGGGGCCCC...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCAGGTTTCCTCCCGGTTaGCCCAGCCAGCTGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGRFPPG*PSQLSQ Trigger: TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCT...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGAGGAAAGGGGAGGCATaGGGCACATCCCAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLLAWALIHQGLKDCKVRRKGEA*GTSQSE Trigger: CTCACTCTGGGATGTGCCGCATGCCTCCCCTTTCCT...CCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCAAATACTTGTTGAGGTaGGGGGAGGAAAGGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGKYLLR*GEERGG Trigger: GCCTCCCCTTTCCTCCCCCCACCTCAACAAGTATTT...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR GCA 90 bp | CGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGAGTTAGTAGGGTCCTaGTCAAAGTTGGGAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RLLAWALIHQGLKDCKVRELVGS*SKLGGR Trigger: CCTGCCTCCCAACTTTGAGCAGGACCCTACTAACTC...CCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | ACAGCACCGAGCTGGGCACCGACGCCCAAAAGCAGATaGGGTGGGGCGCTCCCTGGCTCCCAAGGAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: TAPSWAPTPKSR*GGALPGSQGSH Trigger: GTGGCTTCCTTGGGAGCCAGGGAGCGCCCCACCCCATCTGCTTTTGGGCGTCGGTGCCCAGCTCGGTGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | ATGCACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTaGCCCAGCCAGCTGTCCCAAGGAGACTGGGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: MHSTLQTRFPPG*PSQLSQGDWGP Trigger: GGGCCCCCAGTCTCCTTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | CTGCCAGCAGCAATCAGGGCTGGGGGCAGCCACTCCTaGCCATGGCCGCCTCTTGGCTTGGGCTCTCATTCA | + |
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Preference number: 3 (lower is better) Translates to: LPAAIRAGGSHS*PWPPLGLGSHS Trigger: TGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTGCTGGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | CCAGCAGCCAGGCCAGCCCGCTGCCACAGCTATCCATaGCTGTCCATGGCTGTCCATGGCTGTCCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: PAARPARCHSYP*LSMAVHGCPQQ Trigger: CTGCTGTGGACAGCCATGGACAGCCATGGACAGCCATGGATAGCTGTGGCAGCGGGCTGGCCTGGCTGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | TCCCAGAGTGAGTCCCCAGCAGCCAGGCCAGCCCGCTaGCACAGCTATCCATGGCTGTCCATGGCTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: SQSESPAARPAR*HSYPWLSMAVH Trigger: ATGGACAGCCATGGACAGCCATGGATAGCTGTGGCAGCGGGCTGGCCTGGCTGCTGGGGACTCACTCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | GGGCCCAGGTCATTCACAGATGCGTTCCCCCATCAATaGTCCCCAGCTGTCCAGCGGCCAGGACCTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: GPRSFTDAFPHQ*SPAVQRPGPAL Trigger: AAGGGCAGGTCCTGGCCGCTGGACAGCTGGGGAGCATTGATGGGGGAACGCATCTGTGAATGACCTGGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | GCAGCAATCAGGGCTGGGGGCAGCCACTCCTGCCCATaGCCGCCTCTTGGCTTGGGCTCTCATTCATCAAGG | + |
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Preference number: 3 (lower is better) Translates to: AAIRAGGSHSCP*PPLGLGSHSSR Trigger: CCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCCTGATTGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAAGTCTATCCAATGGGCTaGCCTGAGCCCCACCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQVYPMG*PEPHLA Trigger: GGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGAC...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | CCATGCCTGGGCCACACAAGGAACAGGGTGTGGGCCTaGAGGATGGACTCCCCTAATGTCCAGTGCGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PCLGHTRNRVWA*RMDSPNVQCAC Trigger: ACAGGCGCACTGGACATTAGGGGAGTCCATCCTCCAGGCCCACACCCTGTTCCTTGTGTGGCCCAGGCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | ACCTGGCCATGCCTGGGCCACACAAGGAACAGGGTGTaGGCCTGGAGGATGGACTCCCCTAATGTCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: TWPCLGHTRNRV*AWRMDSPNVQC Trigger: GCACTGGACATTAGGGGAGTCCATCCTCCAGGCCCACACCCTGTTCCTTGTGTGGCCCAGGCATGGCCAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | GGCTGGGGGCAGCCACTCCTGCCCATGGCCGCCTCTTaGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: GWGQPLLPMAAS*LGLSFIKGSKT Trigger: AGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | CTCCCTGGCTCCCAAGGAAGCCACTACTGGGCTCCATaGACAGCACCCTGCAGACTAGGTTTCCTCCCGGTT | + |
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Preference number: 3 (lower is better) Translates to: LPGSQGSHYWAP*TAPCRLGFLPV Trigger: AACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTGCATGGAGCCCAGTAGTGGCTTCCTTGGGAGCCAGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | CTGCCACAGCTATCCATGGCTGTCCATGGCTGTCCATaGCTGTCCACAGCAGCCCAGCACCAAGTCCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: LPQLSMAVHGCP*LSTAAQHQVLS Trigger: GGACAGGACTTGGTGCTGGGCTGCTGTGGACAGCCATGGACAGCCATGGACAGCCATGGATAGCTGTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR GCA 72 bp | GGTGCAGCTTTGATGAGGGCCCAGGTCATTCACAGATaGGTTCCCCCATCAATGCTCCCCAGCTGTCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: GAALMRAQVIHR*VPPSMLPSCPA Trigger: CGCTGGACAGCTGGGGAGCATTGATGGGGGAACGCATCTGTGAATGACCTGGGCCCTCATCAAAGCTGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| 3UTR CCA 72 bp | GGGGCAGCCACTCCTGCCCATGGCCGCCTCTTGGCTTaGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GAATPAHGRLLA*ALIHQGLKDCK Trigger: CTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR TCA 72 bp | TGGCTGTCCACAGCAGCCCAGCACCAAGTCCTGTCCTaGGGCCAAGATCCCCTCAGGCCAGAAGAGTTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WLSTAAQHQVLS*GQDPLRPEELV Trigger: TACTAACTCTTCTGGCCTGAGGGGATCTTGGCCTCAGGACAGGACTTGGTGCTGGGCTGCTGTGGACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAAGGTGCACAAAGTTCTCTaGGAAAAATACCTGACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TAPCRLGFLPVAPASCPKVHKVL*EKYLTP Trigger: GGGGGTCAGGTATTTTTCCAAGAGAACTTTGTGCAC...CTTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR TCA 72 bp | GAGGTTCTGAAAAACTGTCTATCCAATGGGCTTGCCTaGGCCCCACCTGGCCATGCCTGGGCCACACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EVLKNCLSNGLA*APPGHAWATQG Trigger: TCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGGATAGACAGTTTTTCAGAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR CCA 72 bp | GGCAGCAGGGAGATAAATACAGGTAGCTTTAACTACTaGCCTGCCAGCAGCAATCAGGGCTGGGGGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GSREINTGSFNY*PASSNQGWGQP Trigger: TGGCTGCCCCCAGCCCTGATTGCTGCTGGCAGGCCAGTAGTTAAAGCTACCTGTATTTATCTCCCTGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAATGCAGGCCGTGGGGGTaGCCCATCTTGGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQCRPWG*PILAGW Trigger: CCAGCCAGCCAAGATGGGCCACCCCCACGGCCTGCA...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGGTGACCTGCAGGCCGTaGGGGTGGCCCATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQVTCRP*GWPILA Trigger: AGCCAAGATGGGCCACCCCCACGGCCTGCAGGTCAC...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGGGCAGTCGGAGAACGTaGGCCGGTAGTAGAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQGSRRT*AGSRRA Trigger: CGCCCTTCTACTACCGGCCCACGTTCTCCGACTGCC...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGGGGGGTGGCCCATCTTaGCTGGCTGGAAGGTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQGGGPS*LAGRSH Trigger: ATGCGACCTTCCAGCCAGCCAAGATGGGCCACCCCC...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR CAA 72 bp | GGGCTGGGGGCAGCCACTCCTGCCCATGGCCGCCTCTaGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGAATPAHGRL*AWALIHQGLKD Trigger: GTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCGGCCATGGGCAGGAGTGGCTGCCCCCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCTGACTTCACCTTGCTaGCCTGGGGGATGTTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTLTSPC*PGGCSG Trigger: ACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAG...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCAAGTGGTGACCCTGGGTaGACAGTGGGAGGCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSGPEGMGYKAGTAPSWASGDPG*TVGGPP Trigger: TGGAGGGCCTCCCACTGTCCACCCAGGGTCACCACT...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAAGTGTCCTTCAAGTAGGTaGCCTGCAGGCCGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TAPCRLGFLPVAPASCPKCPSSR*PAGRGG Trigger: ACCCCCACGGCCTGCAGGTCACCTACTTGAAGGACA...CTTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR GCA 90 bp | CATGCGGCACATCCCAGAGTGAGTCCCCAGCAGCCAGGCCAGCCCGCTGCCACAGTAGTGGAATCGGGCTaGTCGCAGTGCATTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: HAAHPRVSPQQPGQPAATVVESG*SQCIEP Trigger: TGGTTCAATGCACTGCGAGCAGCCCGATTCCACTAC...TGTGGCAGCGGGCTGGCCTGGCTGCTGGGGACTCACTCTGGGATGTGCCGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGTGCATCACTGGCTCCTaGGAAAGCCACCTGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTCITGS*ESHLQV Trigger: TACCTGCAGGTGGCTTTCCCAGGAGCCAGTGATGCA...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGTTCGGTCATCCATGGTaGACCAACGCTTCCGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQFGHPW*TNASGS Trigger: GCTTCCGGAAGCGTTGGTTCACCATGGATGACCGAA...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGTTTCCTTGCTGCCAATaGAGACTTCCCCTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTFPCCQ*RLPLGQ Trigger: TTGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAAA...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACCACTCCCTCTGGTCTaGCTCCGTCTCACACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQPLPLV*LRLTRE Trigger: TTCACGTGTGAGACGGAGTCAGACCAGAGGGAGTGG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACTGTCCACCACCTTCTaGAAGGCCGCAATCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQLSTTF*KAAIHS Trigger: GGAGTGGATTGCGGCCTTCCAGAAGGTGGTGGACAG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGCTTGCCTCTCATACTTaGCACGGATCCACTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQLASHT*HGSTAH Trigger: GTGAGCAGTGGATCCGTGCCAAGTATGAGAGGCAAG...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCACCCTGCAGACTAGGTTTCCTCCCGGTTGCCCCAGCCAGCTGTCCCAACCAGATCTGCATCACTaGCTCCTGGGAAAGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: HSTLQTRFPPGCPSQLSQPDLHH*LLGKPP Trigger: AGGTGGCTTTCCCAGGAGCCAGTGATGCAGATCTGG...TTGGGACAGCTGGCTGGGGCAACCGGGAGGAAACCTAGTCTGCAGGGTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCAGCAATCCACTCCCTCTaGTCTGACTCCGTCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGPEGMGYKAGTAPSWAAIHSL*SDSVSH Trigger: GTGTGAGACGGAGTCAGACCAGAGGGAGTGGATTGC...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGGGTTTATGCTTGAAGTaGGCTTCCACTGCGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTGLCLK*ASTAYS Trigger: GGAGTACGCAGTGGAAGCCCACTTCAAGCATAAACC...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | GTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCCCAAAAGCAGATGGGTTCACCTTGCTGACCTaGGGGATGTTCCGGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VTKQGQHRAGHRRPKADGFTLLT*GMFRWI Trigger: GATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAA...CCCATCTGCTTTTGGGCGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | GTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCCCAAAAGCAGATGGGACTCCGTCTCACACGTaGACAGGAATTTGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTKQGQHRAGHRRPKADGTPSHT*TGICGQ Trigger: CTGACCGCAAATTCCTGTTCACGTGTGAGACGGAGT...CCCATCTGCTTTTGGGCGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCAAGAAGGGCGGTACTTTaGACTCAAATGTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSGPEGMGYKAGTAPSWARRAVL*TQMWLW Trigger: CCAGAGCCACATTTGAGTCCAAAGTACCGCCCTTCT...TGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCCTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGGCCAGAGGGCGGCATCCAGACGGACTaGCTTCACCTTGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSFIKGSKTVRSGPEGGIQTD*LHLADL Trigger: CAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCC...GCCCTCTGGCCCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| 3UTR CAA 72 bp | CTCAGGCCAGAAGAGTTAGTAGGGTCCTGCTCAAAGTaGGGAGGCAGGGCTTCCAGCAGCAGGAGAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRPEELVGSCSK*GGRASSSRRVD Trigger: ATCCACTCTCCTGCTGCTGGAAGCCCTGCCTCCCAACTTTGAGCAGGACCCTACTAACTCTTCTGGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | CGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGTCCCATGAGATGCCATaGACTCAACTTGGGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLLAWALIHQGLKDCKVRSHEMP*TQLGPH Trigger: ATGAGGCCCAAGTTGAGTTCATGGCATCTCATGGGA...CCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR TCA 90 bp | CGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGTGGCATCGTTTTTGTTaGAGTATTTCAGGGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLAWALIHQGLKDCKVRWHRFC*SISGHP Trigger: AGGGTGCCCTGAAATACTTCAACAAAAACGATGCCA...CCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGGCGTCCAGGGGGTCTTaGAAGTACATGAGCCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQASRGS*KYMSLR Trigger: CCGAAGGCTCATGTACTTCAAAGACCCCCTGGACGC...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCACAGCAGCCCAGCACCAAGTCCTGTCCTGAGGCCAAGATCCCCTCAGGCCTTAAGAACTGTCCGTaGTCCCGCCCACGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPQQPSTKSCPEAKIPSGLKNCP*SRPRFQ Trigger: CTGGAAGCGTGGGCGGGACAACGGACAGTTCTTAAG...GCCTGAGGGGATCTTGGCCTCAGGACAGGACTTGGTGCTGGGCTGCTGTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CAA 90 bp | CCAATGGGCTTGCCTGAGCCCCACCTGGCCATGCCTGGGCCACACAAGGAACAGTCTTGCCTCTCATACTaGGCACGGATCCACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PMGLPEPHLAMPGPHKEQSCLSY*ARIHCS Trigger: TGAGCAGTGGATCCGTGCCAAGTATGAGAGGCAAGA...CTGTTCCTTGTGTGGCCCAGGCATGGCCAGGTGGGGCTCAGGCAAGCCCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS TCA 90 bp | CTTGGGCCTCATCCCAGGCATCCAGACGGACTGACTTCACCTTGCTaGCCTGGGGGATGTTCCGGTGGATCCCAGAGCAGCTCAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGPHPRHPDGLTSPC*PGGCSGGSQSSSNR Trigger: TCTGTTTGAGCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS TCA 90 bp | CCTGTCCACCACCTTCTGGAAGGCCGCAATCCACTCCCTCTGGTCTaGCTCCGTCTCACACGTGAACAGGAATTTGCGGTCAGGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVHHLLEGRNPLPLV*LRLTREQEFAVRGD Trigger: GTCACCCCTGACCGCAAATTCCTGTTCACGTGTGAGACGGAGTCAGACCAGAGGGAGTGGATTGCGGCCTTCCAGAAGGTGGTGGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | CTTCAAGTAGGTGACCTGCAGGCCGTGGGGGTGGCCCATCTTGGCTaGCTGGAAGGTCGCATTCAGGTGCTCAATCTTCATGACGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVGDLQAVGVAHLG*LEGRIQVLNLHDGL Trigger: AAGGCCGTCATGAAGATTGAGCACCTGAATGCGACCTTCCAGCCAGCCAAGATGGGCCACCCCCACGGCCTGCAGGTCACCTACTTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | GACAATGGTTATGCCATGAGGCCAGTGGTGACCCTGGGTGGACAGTaGGAGGCCCTCCAGGACCGTGTAACCGCTTTCCTTGCTGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DNGYAMRPVVTLGGQ*EALQDRVTAFLAAN Trigger: ATTGGCAGCAAGGAAAGCGGTTACACGGTCCTGGAGGGCCTCCCACTGTCCACCCAGGGTCACCACTGGCCTCATGGCATAACCATTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | ATGGGCCTGTCCACCACCTTCTGGAAGGCCGCAATCCACTCCCTCTaGTCTGACTCCGTCTCACACGTGAACAGGAATTTGCGGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MGLSTTFWKAAIHSL*SDSVSHVNRNLRSG Trigger: CCCTGACCGCAAATTCCTGTTCACGTGTGAGACGGAGTCAGACCAGAGGGAGTGGATTGCGGCCTTCCAGAAGGTGGTGGACAGGCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGAGGGCATGGGTTACAAAGCAGGGACAGCACCGAGCTGGGCACCGACGCACATGAACGAATTCTaGCCTCTCATACTTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GPEGMGYKAGTAPSWAPTHMNEF*PLILGT Trigger: CGTGCCAAGTATGAGAGGCAAGAATTCGTTCATGTG...CGTCGGTGCCCAGCTCGGTGCTGTCCCTGCTTTGTAACCCATGCCCTCTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS-3UTR CAA 90 bp | CGCCTCTTGGCTTGGGCTCTCATTCATCAAGGGCTCAAAGACTGTAAGGTCAGGTGGGGGTGGCCCATCTaGGCTGGCTGGAAGGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLAWALIHQGLKDCKVRWGWPI*AGWKVA Trigger: TGCGACCTTCCAGCCAGCCAAGATGGGCCACCCCCA...CCTGACCTTACAGTCTTTGAGCCCTTGATGAATGAGAGCCCAAGCCAAGAGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS TCA 90 bp | TGCCATGAACTCAACTTGGGCCTCATCCCAGGCATCCAGACGGACTaGCTTCACCTTGCTGACCTGGGGGATGTTCCGGTGGATCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CHELNLGLIPGIQTD*LHLADLGDVPVDPR Trigger: TCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAGTTGAGTTCATGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS GCA 90 bp | CCGTGGGGGTGGCCCATCTTGGCTGGCTGGAAGGTCGCATTCAGGTaGTCAATCTTCATGACGGCCTTAGGCTCCTTGGCATCGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWGWPILAGWKVAFR*SIFMTALGSLASFL Trigger: CAAAAACGATGCCAAGGAGCCTAAGGCCGTCATGAAGATTGAGCACCTGAATGCGACCTTCCAGCCAGCCAAGATGGGCCACCCCCACGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | GCCTCATCCCAGGCATCCAGACGGACTGACTTCACCTTGCTGACCTaGGGGATGTTCCGGTGGATCCCAGAGCAGCTCAAACAGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSQASRRTDFTLLT*GMFRWIPEQLKQMN Trigger: GTTCATCTGTTTGAGCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | GTTGGCAGTCGGAGAACGTGGGCCGGTAGTAGAAGGGCGGTACTTTaGACTCAAATGTGGCTCTGGCAGCCTCGTTCCCATGAGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGSRRTWAGSRRAVL*TQMWLWQPRSHEMP Trigger: TGGCATCTCATGGGAACGAGGCTGCCAGAGCCACATTTGAGTCCAAAGTACCGCCCTTCTACTACCGGCCCACGTTCTCCGACTGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | TGGCACGGATCCACTGCTCACGTAGGAGTTGGCAGTCGGAGAACGTaGGCCGGTAGTAGAAGGGCGGTACTTTGGACTCAAATGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WHGSTAHVGVGSRRT*AGSRRAVLWTQMWL Trigger: GAGCCACATTTGAGTCCAAAGTACCGCCCTTCTACTACCGGCCCACGTTCTCCGACTGCCAACTCCTACGTGAGCAGTGGATCCGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS TCA 90 bp | TGGACTCAAATGTGGCTCTGGCAGCCTCGTTCCCATGAGATGCCATaGACTCAACTTGGGCCTCATCCCAGGCATCCAGACGGACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: WTQMWLWQPRSHEMP*TQLGPHPRHPDGLT Trigger: AGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAGTTGAGTTCATGGCATCTCATGGGAACGAGGCTGCCAGAGCCACATTTGAGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
||
| CDS CCA 90 bp | CCGCCCACGCTTCCAGAGAAGGCCCTCACGGTAGCCTGTAGAGTATaGTTCCTGCTTCTCCACATGAACGAATTCTTGCCTCTCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPTLPEKALTVACRV*FLLLHMNEFLPLIL Trigger: AAGTATGAGAGGCAAGAATTCGTTCATGTGGAGAAGCAGGAACCATACTCTACAGGCTACCGTGAGGGCCTTCTCTGGAAGCGTGGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 90 bp | ATGGTTCCTGCTTCTCCACATGAACGAATTCTTGCCTCTCATACTTaGCACGGATCCACTGCTCACGTAGGAGTTGGCAGTCGGAGAACG | + |
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Preference number: 5 (lower is better) Translates to: MVPASPHERILASHT*HGSTAHVGVGSRRT Trigger: CGTTCTCCGACTGCCAACTCCTACGTGAGCAGTGGATCCGTGCCAAGTATGAGAGGCAAGAATTCGTTCATGTGGAGAAGCAGGAACCAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | CATCCCAGGCATCCAGACGGACTGACTTCACCTTGCTaGCCTGGGGGATGTTCCGGTGGATCCCAGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HPRHPDGLTSPC*PGGCSGGSQSS Trigger: GCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | CCTCCAGGACCGTGTAACCGCTTTCCTTGCTGCCAATaGAGACTTCCCCTCGGGCAAAGGCGTCCAGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PPGPCNRFPCCQ*RLPLGQRRPGG Trigger: ACCCCCTGGACGCCTTTGCCCGAGGGGAAGTCTTCATTGGCAGCAAGGAAAGCGGTTACACGGTCCTGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | ACCTGCAGGCCGTGGGGGTGGCCCATCTTGGCTGGCTaGAAGGTCGCATTCAGGTGCTCAATCTTCATGACG | + |
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Preference number: 6 (lower is better) Translates to: TCRPWGWPILAG*KVAFRCSIFMT Trigger: CGTCATGAAGATTGAGCACCTGAATGCGACCTTCCAGCCAGCCAAGATGGGCCACCCCCACGGCCTGCAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | TATGCCATGAGGCCAGTGGTGACCCTGGGTGGACAGTaGGAGGCCCTCCAGGACCGTGTAACCGCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: YAMRPVVTLGGQ*EALQDRVTAFL Trigger: AAGGAAAGCGGTTACACGGTCCTGGAGGGCCTCCCACTGTCCACCCAGGGTCACCACTGGCCTCATGGCATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 72 bp | GCCTCATCCCAGGCATCCAGACGGACTGACTTCACCTaGCTGACCTGGGGGATGTTCCGGTGGATCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ASSQASRRTDFT*LTWGMFRWIPE Trigger: CTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | CTCAACTTGGGCCTCATCCCAGGCATCCAGACGGACTaGCTTCACCTTGCTGACCTGGGGGATGTTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LNLGLIPGIQTD*LHLADLGDVPV Trigger: CACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAGTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 90 bp | TCAACTTGGGCCTCATCCCAGGCATCCAGACGGACTGACTTCACCTaGCTGACCTGGGGGATGTTCCGGTGGATCCCAGAGCAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: STWASSQASRRTDFT*LTWGMFRWIPEQLK Trigger: TTTGAGCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAGTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | CAGGCATCCAGACGGACTGACTTCACCTTGCTGACCTaGGGGATGTTCCGGTGGATCCCAGAGCAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: QASRRTDFTLLT*GMFRWIPEQLK Trigger: TTTGAGCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 72 bp | TCTGTCAGCACAAACTTCCGGCTTAAGAACTGTCCGTaGTCCCGCCCACGCTTCCAGAGAAGGCCCTCACGG | + |
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Preference number: 6 (lower is better) Translates to: SVSTNFRLKNCP*SRPRFQRRPSR Trigger: CCGTGAGGGCCTTCTCTGGAAGCGTGGGCGGGACAACGGACAGTTCTTAAGCCGGAAGTTTGTGCTGACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | ATGTGGCTCTGGCAGCCTCGTTCCCATGAGATGCCATaGACTCAACTTGGGCCTCATCCCAGGCATCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: MWLWQPRSHEMP*TQLGPHPRHPD Trigger: GTCTGGATGCCTGGGATGAGGCCCAAGTTGAGTTCATGGCATCTCATGGGAACGAGGCTGCCAGAGCCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | CCTGCAGGTAGTGGAATCGGGCTGCTCGCAGTGCATTaGACCAGTCCACGATCTCCTTGCCGTCTTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: PAGSGIGLLAVH*TSPRSPCRLHG Trigger: ACCATGAAGACGGCAAGGAGATCGTGGACTGGTTCAATGCACTGCGAGCAGCCCGATTCCACTACCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | CACCTTCTGGAAGGCCGCAATCCACTCCCTCTGGTCTaGCTCCGTCTCACACGTGAACAGGAATTTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLEGRNPLPLV*LRLTREQEFAV Trigger: GACCGCAAATTCCTGTTCACGTGTGAGACGGAGTCAGACCAGAGGGAGTGGATTGCGGCCTTCCAGAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS GCA 72 bp | TGGCCCATCTTGGCTGGCTGGAAGGTCGCATTCAGGTaGTCAATCTTCATGACGGCCTTAGGCTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WPILAGWKVAFR*SIFMTALGSLA Trigger: TGCCAAGGAGCCTAAGGCCGTCATGAAGATTGAGCACCTGAATGCGACCTTCCAGCCAGCCAAGATGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | TCCACTGCTCACGTAGGAGTTGGCAGTCGGAGAACGTaGGCCGGTAGTAGAAGGGCGGTACTTTGGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: STAHVGVGSRRT*AGSRRAVLWTQ Trigger: TTGAGTCCAAAGTACCGCCCTTCTACTACCGGCCCACGTTCTCCGACTGCCAACTCCTACGTGAGCAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | ACTGACTTCACCTTGCTGACCTGGGGGATGTTCCGGTaGATCCCAGAGCAGCTCAAACAGATGAACACACCC | + |
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Preference number: 6 (lower is better) Translates to: TDFTLLTWGMFR*IPEQLKQMNTP Trigger: GGGTGTGTTCATCTGTTTGAGCTGCTCTGGGATCCACCGGAACATCCCCCAGGTCAGCAAGGTGAAGTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | TCCACCACCTTCTGGAAGGCCGCAATCCACTCCCTCTaGTCTGACTCCGTCTCACACGTGAACAGGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: STTFWKAAIHSL*SDSVSHVNRNL Trigger: CAAATTCCTGTTCACGTGTGAGACGGAGTCAGACCAGAGGGAGTGGATTGCGGCCTTCCAGAAGGTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS TCA 72 bp | TTGGACTCAAATGTGGCTCTGGCAGCCTCGTTCCCATaGGATGCCATGAACTCAACTTGGGCCTCATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LDSNVALAASFP*DAMNSTWASSQ Trigger: CTGGGATGAGGCCCAAGTTGAGTTCATGGCATCTCATGGGAACGAGGCTGCCAGAGCCACATTTGAGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CCA 72 bp | CTTCCAGAGAAGGCCCTCACGGTAGCCTGTAGAGTATaGTTCCTGCTTCTCCACATGAACGAATTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPEKALTVACRV*FLLLHMNEFLP Trigger: AGGCAAGAATTCGTTCATGTGGAGAAGCAGGAACCATACTCTACAGGCTACCGTGAGGGCCTTCTCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 72 bp | AGAGTATGGTTCCTGCTTCTCCACATGAACGAATTCTaGCCTCTCATACTTGGCACGGATCCACTGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: RVWFLLLHMNEF*PLILGTDPLLT Trigger: CGTGAGCAGTGGATCCGTGCCAAGTATGAGAGGCAAGAATTCGTTCATGTGGAGAAGCAGGAACCATACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 72 bp | TTCATGACGGCCTTAGGCTCCTTGGCATCGTTTTTGTaGAAGTATTTCAGGGCACCCTCTCGTTCTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FMTALGSLASFL*KYFRAPSRSVS Trigger: GCTGACAGAACGAGAGGGTGCCCTGAAATACTTCAACAAAAACGATGCCAAGGAGCCTAAGGCCGTCATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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| CDS CAA 72 bp | TTCAGGTGCTCAATCTTCATGACGGCCTTAGGCTCCTaGGCATCGTTTTTGTTGAAGTATTTCAGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: FRCSIFMTALGS*ASFLLKYFRAP Trigger: GGGTGCCCTGAAATACTTCAACAAAAACGATGCCAAGGAGCCTAAGGCCGTCATGAAGATTGAGCACCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110865.2 |
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