Pregenerated sensors for ADAMTSL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043822Ensembl transcript IDs: ENSMUST00000095446.10, ENSMUST00000105352.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTaGGTCATGGGACGCCAGAACAGGAGCCCTGCTGAGGATCCAACC | + |
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Preference number: 1 (lower is better) Translates to: ETLVKIYELPGGRFS*VMGRQNRSPAEDPT Trigger: GGTTGGATCCTCAGCAGGGCTCCTGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR CCA 90 bp | TGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTCATaGGACGCCAGAACAGGAGCCCTGCTGAGGATCCAACCTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: WLKYMSFQVGGFPES*DARTGALLRIQPPG Trigger: CCCTGGAGGTTGGATCCTCAGCAGGGCTCCTGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR CCA 90 bp | GAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTaGATTACCATAACTTCAAGGTTAGCCTGGTCTACACAGAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: ECTFNPSTHCRDRGR*ITITSRLAWSTQSS Trigger: GGAACTCTGTGTAGACCAGGCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR GCA 90 bp | TTAAAGTTCTCAGATATGGAGTGCACCTTTAATCCCAGCACTCACTaGAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGTTAGCC | + |
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Preference number: 1 (lower is better) Translates to: LKFSDMECTFNPSTH*RDRGRWITITSRLA Trigger: GGCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCATATCTGAGAACTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR TCA 90 bp | AGAGATGAACAGAAAGTTGTTTCGCGGAAAAGTAGCCCAGGATCTTaGAGCTCCTTAAAGTTCTCAGATATGGAGTGCACCTTTAATCCC | + |
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Preference number: 1 (lower is better) Translates to: RDEQKVVSRKSSPGS*SSLKFSDMECTFNP Trigger: GGGATTAAAGGTGCACTCCATATCTGAGAACTTTAAGGAGCTTCAAGATCCTGGGCTACTTTTCCGCGAAACAACTTTCTGTTCATCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR-3UTR TCA 90 bp | AATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGGAACAGGAGCCCTGCTaGGGATCCAACCTCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NPSTHCRDRGRWITITSREQEPC*GSNLQG Trigger: CCCCTGGAGGTTGGATCCTCAGCAGGGCTCCTGTTC...CCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR-3UTR TCA 90 bp | TTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAGGTGGGAGGTTTTCCTaGGTCATGGGACGCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: FNPSTHCRDRGRWITITSGGRFS*VMGRQN Trigger: GTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACC...TGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR CCA 72 bp | TATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTCATaGGACGCCAGAACAGGAGCCCTGCTGAGGATCCAA | + |
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Preference number: 3 (lower is better) Translates to: YMSFQVGGFPES*DARTGALLRIQ Trigger: TTGGATCCTCAGCAGGGCTCCTGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR TCA 72 bp | GTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTaGGTCATGGGACGCCAGAACAGGAGCCCTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VKIYELPGGRFS*VMGRQNRSPAE Trigger: CTCAGCAGGGCTCCTGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR CCA 72 bp | GGTCTACACAGAGTTCCAGGCCAGTCAGGGAGACCCTaGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GLHRVPGQSGRP*LKYMSFQVGGF Trigger: AAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGACTGGCCTGGAACTCTGTGTAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR GCA 72 bp | TCAGATATGGAGTGCACCTTTAATCCCAGCACTCACTaGAGAGACAGAGGCAGGTGGATTACCATAACTTCA | + |
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Preference number: 3 (lower is better) Translates to: SDMECTFNPSTH*RDRGRWITITS Trigger: TGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCATATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| 3UTR CCA 72 bp | TTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTaGATTACCATAACTTCAAGGTTAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: FNPSTHCRDRGR*ITITSRLAWST Trigger: TGTAGACCAGGCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAAAGCGGTCCTCGAGGGTaGCGGAGCCCAGTATCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SIRGRVGRSVRGQSGEAQSGPRG*RSPVSR Trigger: ACGGGATACTGGGCTCCGGCACCCTCGAGGACCGCT...TTGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR GCA 90 bp | ATCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAGGACACATTGGCGTCTaGGCACTGAGACGCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: IYSREGGTLCQRPIRGSPGHIGV*ALRRPD Trigger: GTCGGGGCGTCTCAGTGCGCAGACGCCAATGTGTCC...TGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR CCA 90 bp | ATCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAGGTCTCGGAATGGTGTaGTCCCTGGAGGGCAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: IYSREGGTLCQRPIRGSPGLGMV*SLEGSP Trigger: CGGACTGCCCTCCAGGGACCACACCATTCCGAGACC...TGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR TCA 90 bp | TCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAAGGAAGAGGCGGGGTTTaGGGGAGCACAGGGTTACCA | + |
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Preference number: 4 (lower is better) Translates to: SIRGRVGRSVRGQSGEAQGRGGV*GSTGLP Trigger: TGGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCC...TTGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR GCA 90 bp | ATCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAAAGAGCTGGAACACCTaGTCCAAGACCCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IYSREGGTLCQRPIRGSPKSWNT*SKTPRA Trigger: CGCCCTGGGGGTCTTGGAGCAGGTGTTCCAGCTCTT...TGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR CCA 90 bp | ATCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCACTGCAGGTCTCGGAATaGTGTGGTCCCTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IYSREGGTLCQRPIRGSPLQVSE*CGPWRA Trigger: TGCCCTCCAGGGACCACACCATTCCGAGACCTGCAG...TGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR CCA 90 bp | CAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGTTAGCCGGGTCTCCTGGGCCTaGCGGTGGCGGCCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: QHSLQRQRQVDYHNFKVSRVSWA*RWRPST Trigger: TGTGCTGGGCCGCCACCGCCAGGCCCAGGAGACCCG...GCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | TCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAAGGTGGTGAGTCAGAATaGGACAGTCACCGGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: SIRGRVGRSVRGQSGEAQGGESE*DSHRRR Trigger: GCGACGCCGGTGACTGTCCCATTCTGACTCACCACC...TTGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS-3UTR GCA 90 bp | AATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGCCGGGGTGCAGGGGGTaGCATCCAGCACGCGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: NPSTHCRDRGRWITITSRPGCRG*HPARGQ Trigger: TTGGCCGCGTGCTGGATGGCACCCCCTGCACCCCGG...CCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | CTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGTTAGCCTGGTCTACGTGGGGCCGGTCGCCTaGAGAGTCTCCTCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LQRQRQVDYHNFKVSLVYVGPVA*RVSSGP Trigger: GGGCCCAGAGGAGACTCTGCAGGCGACCGGCCCCAC...GTAGACCAGGCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTATGTGCTACGCGGATGTaGCTGGCGCCCTCGGGGATC | + |
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Preference number: 4 (lower is better) Translates to: WSAPLIPALTAETEAGGLCATRM*LAPSGI Trigger: GATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACA...TAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGCAGCTCCTGGGAGGTaGGGCCGGTCGCCTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QSGRPWLKYMSFQVGGFPAAPGR*GRSPAE Trigger: CTCTGCAGGCGACCGGCCCCACCTCCCAGGAGCTGC...AGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | CAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGTTAGCGTGTGGGGCCAGTGGTaGGCACGGACAGTGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QHSLQRQRQVDYHNFKVSVWGQW*ARTVAW Trigger: CCAGGCCACTGTCCGTGCCCACCACTGGCCCCACAC...GCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTAGGACACATTGGCGTCTaGGCACTGAGACGCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: WSAPLIPALTAETEAGGLGHIGV*ALRRPD Trigger: GTCGGGGCGTCTCAGTGCGCAGACGCCAATGTGTCC...TAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TCAGATATGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGGTTGTGGCTGCGCTGTaGTACGCGGATGTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SDMECTFNPSTHCRDRGRVVAAL*YADVPG Trigger: GCCAGGCACATCCGCGTAGCACAGCGCAGCCACAAC...CCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCATATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TCAGATATGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGGTCTGGTGGCAGGGATaGAACACGGGCAGGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SDMECTFNPSTHCRDRGRVWWQG*NTGRDG Trigger: GCCATCCCTGCCCGTGTTGCATCCCTGCCACCAGAC...CCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCATATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TCAGATATGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGAAGAGCTGGAACACCTaGTCCAAGACCCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SDMECTFNPSTHCRDRGRKSWNT*SKTPRA Trigger: CGCCCTGGGGGTCTTGGAGCAGGTGTTCCAGCTCTT...CCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCATATCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | GGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTCAAGCGGTCCTCGAGGGTaGCGGAGCCCAGTATCCCGT | + |
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Preference number: 4 (lower is better) Translates to: GRPWLKYMSFQVGGFPESSGPRG*RSPVSR Trigger: ACGGGATACTGGGCTCCGGCACCCTCGAGGACCGCT...TGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | TGGAGTGCACCTTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCAGGTGGTTGTGGCTaGGCTGTGCTACGCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: WSAPLIPALTAETEAGGLPGGCG*AVLRGC Trigger: ACATCCGCGTAGCACAGCGCAGCCACAACCACCTGG...TAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAAGGTGCACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | TCAGGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTGGCCCGCAGGGGTCTaGTGGCAGGGATGCAACACG | + |
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Preference number: 4 (lower is better) Translates to: SGRPWLKYMSFQVGGFPEWPAGV*WQGCNT Trigger: CGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCA...CTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | CAGTCAGGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTCTACGCGGATGTGCCTaGCGCCCTCGGGGATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QSGRPWLKYMSFQVGGFPLRGCA*RPRGSK Trigger: CTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAG...AGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR TCA 90 bp | GGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTCAGGAAGAGGCGGGGTTTaGGGGAGCACAGGGTTACCA | + |
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Preference number: 4 (lower is better) Translates to: GRPWLKYMSFQVGGFPESGRGGV*GSTGLP Trigger: TGGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCC...TGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAGGTCTCGGAATGGTGTaGTCCCTGGAGGGCAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FNPSTHCRDRGRWITITSGLGMV*SLEGSP Trigger: CGGACTGCCCTCCAGGGACCACACCATTCCGAGACC...TGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | AAATATATGAGCTTCCAGGTGGGAGGTTTTCCTGAGTCATGGGACGCCAGAACACTGCAGGTCTCGGAATaGTGTGGTCCCTGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KYMSFQVGGFPESWDARTLQVSE*CGPWRA Trigger: TGCCCTCCAGGGACCACACCATTCCGAGACCTGCAG...TGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCATATATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CCA 90 bp | TTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCACCCAGCACACGGGCCTaGAACACAAAGTCGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FNPSTHCRDRGRWITITSPSTRA*NTKSLP Trigger: TGGCAGCGACTTTGTGTTCCAGGCCCGTGTGCTGGG...TGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR GCA 90 bp | CCAGTCAGGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCGGAACACAAAGTCGCTaGCACAGTAGTGAAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PVRETLVKIYELPGGRFSGTQSR*HSSEEA Trigger: GGCTTCTTCACTACTGTGGCAGCGACTTTGTGTTCC...GGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 90 bp | GCAGCGGTCCTCGAGGGTGCCGGAGCCCAGTATCCCGTCACAGCCTaGGCTCAGACAGCGGCCTGCCACGCAGAGACCCTGGGTACCCGG | + |
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Preference number: 5 (lower is better) Translates to: AAVLEGAGAQYPVTA*AQTAACHAETLGTR Trigger: CCGGGTACCCAGGGTCTCTGCGTGGCAGGCCGCTGTCTGAGCGCAGGCTGTGACGGGATACTGGGCTCCGGCACCCTCGAGGACCGCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | CAGCAGCTCCTGGGAGGTGGGGCCGGTCGCCTGCAGAGTCTCCTCTaGGCCCGCACTCCGGGTGTAAACCACTCGGGTGCCCGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QQLLGGGAGRLQSLL*ARTPGVNHSGARSL Trigger: GAGGCTGCGGGCACCCGAGTGGTTTACACCCGGAGTGCGGGCCCAGAGGAGACTCTGCAGGCGACCGGCCCCACCTCCCAGGAGCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | ACGCCTGGGTTGGGCTCCCGCAGCAGCACCTGTAACAGCAGCTCCTaGGAGGTGGGGCCGGTCGCCTGCAGAGTCTCCTCTGGGCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: TPGLGSRSSTCNSSS*EVGPVACRVSSGPA Trigger: TGCGGGCCCAGAGGAGACTCTGCAGGCGACCGGCCCCACCTCCCAGGAGCTGCTGTTACAGGTGCTGCTGCGGGAGCCCAACCCAGGCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 90 bp | AGCGGCCTGCCACGCAGAGACCCTGGGTACCCGGGGTGCAGGGGGTaGCATCCAGCACGCGGCCAAAGCTGTGGTAGAAGGCGTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SGLPRRDPGYPGCRG*HPARGQSCGRRRGL Trigger: AAGGCCACGCCTTCTACCACAGCTTTGGCCGCGTGCTGGATGGCACCCCCTGCACCCCGGGTACCCAGGGTCTCTGCGTGGCAGGCCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS GCA 90 bp | CGCTCAGACAGCGGCCTGCCACGCAGAGACCCTGGGTACCCGGGGTaGAGGGGGTGCCATCCAGCACGCGGCCAAAGCTGTGGTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RSDSGLPRRDPGYPG*RGCHPARGQSCGRR Trigger: CCTTCTACCACAGCTTTGGCCGCGTGCTGGATGGCACCCCCTGCACCCCGGGTACCCAGGGTCTCTGCGTGGCAGGCCGCTGTCTGAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS GCA 90 bp | GTGCCCGCCGCGGGTAACCAGCGCCAGGTGGTTGTGGCTGCGCTGTaGTACGCGGATGTGCCTGGCGCCCTCGGGGATCAAAGTCACATT | + |
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Preference number: 5 (lower is better) Translates to: VPAAGNQRQVVVAAL*YADVPGALGDQSHI Trigger: AATGTGACTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACCTGGCGCTGGTTACCCGCGGCGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | ATGGCCCGCAGGGGTCTGGTGGCAGGGATGCAACACGGGCAGGGATaGCCTCGGGGACTACAGGAGTCTCTGCAGGCTGTGGCTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: MARRGLVAGMQHGQG*PRGLQESLQAVAPP Trigger: AGGTGGAGCCACAGCCTGCAGAGACTCCTGTAGTCCCCGAGGCCATCCCTGCCCGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | ACAGTAGTGAAGAAGCCGGTGTGCGCGACCACGGCTGTCGGGGCATaGCCCGCAGGGGTCTGGTGGCAGGGATGCAACACGGGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: TVVKKPVCATTAVGA*PAGVWWQGCNTGRD Trigger: ATCCCTGCCCGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCATGCCCCGACAGCCGTGGTCGCGCACACCGGCTTCTTCACTACTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | CCAGCGCCAGGTGGTTGTGGCTGCGCTGTGCTACGCGGATGTGCCTaGCGCCCTCGGGGATCAAAGTCACATTCCAGAAGCCGGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGGCGCAVLRGCA*RPRGSKSHSRSRRR Trigger: CCTTCGCCGGCTTCTGGAATGTGACTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACCTGGCGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | CATAGCGCTCCCGGGGCAGCCAGAACTCGAAGTGTACGCCTGGGTTaGGCTCCCGCAGCAGCACCTGTAACAGCAGCTCCTGGGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSAPGAARTRSVRLG*APAAAPVTAAPGRW Trigger: CCACCTCCCAGGAGCTGCTGTTACAGGTGCTGCTGCGGGAGCCCAACCCAGGCGTACACTTCGAGTTCTGGCTGCCCCGGGAGCGCTATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 90 bp | GTAACCAGCGCCAGGTGGTTGTGGCTGCGCTGTGCTACGCGGATGTaGCTGGCGCCCTCGGGGATCAAAGTCACATTCCAGAAGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VTSARWLWLRCATRM*LAPSGIKVTFQKPA Trigger: CGCCGGCTTCTGGAATGTGACTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACCTGGCGCTGGTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS TCA 90 bp | CGCGGCCAAAGCTGTGGTAGAAGGCGTGGCCTTCAGCTAGGCAGTTaGGGTCACACACATTGGGCGCCCCGTGGAAGGGCACCCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGQSCGRRRGLQLGS*GHTHWAPRGRAPTG Trigger: ACCAGTGGGTGCCCTTCCACGGGGCGCCCAATGTGTGTGACCTCAACTGCCTAGCTGAAGGCCACGCCTTCTACCACAGCTTTGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | GAACACCTGCTCCAAGACCCCCAGGGCGTCCACTCTCCCGGACCCTaGGCAGCACCCCTCAAATCACAGCTCAGGAGAGTCCACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EHLLQDPQGVHSPGP*AAPLKSQLRRVHSK Trigger: CTTGCTGTGGACTCTCCTGAGCTGTGATTTGAGGGGTGCTGCCCAGGGTCCGGGAGAGTGGACGCCCTGGGGGTCTTGGAGCAGGTGTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | GTGGTCCCTGGAGGGCAGTCCGGCAGCTGGCACACCCGGTATTCATaGCTGTCGCCCCAACAAAGTTCCTCTCCGGGAAGTCGGACACAT | + |
|
Preference number: 5 (lower is better) Translates to: VVPGGQSGSWHTRYS*LSPQQSSSPGSRTH Trigger: ATGTGTCCGACTTCCCGGAGAGGAACTTTGTTGGGGCGACAGCCATGAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCCAGGGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | CACCCCTCTCCACTGTGTTTCTCAAGCGCTGGTGGTGAGTCAGAATaGGACAGTCACCGGCGTCGCGGAACACGCGCTGCACGAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HPSPLCFSSAGGESE*DSHRRRGTRAARTG Trigger: GCCTGTTCGTGCAGCGCGTGTTCCGCGACGCCGGTGACTGTCCCATTCTGACTCACCACCAGCGCTTGAGAAACACAGTGGAGAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS CCA 90 bp | TGCAGGTCTCGGAATGGTGTGGTCCCTGGAGGGCAGTCCGGCAGCTaGCACACCCGGTATTCATGGCTGTCGCCCCAACAAAGTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSRNGVVPGGQSGS*HTRYSWLSPQQSSS Trigger: AGAGGAACTTTGTTGGGGCGACAGCCATGAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCCAGGGACCACACCATTCCGAGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | GAGTCGCCTGGCAGCCAACAGGTATTCTCGGTGTGGGGCCAGTGGTaGGCACGGACAGTGGCCTGGTGCCCATACATATTCTCGAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: ESPGSQQVFSVWGQW*ARTVAWCPYIFSST Trigger: CGTACTCGAGAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATACCTGTTGGCTGCCAGGCGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 90 bp | ATCAGGGCTTACGAGTCGCCTGGCAGCCAACAGGTATTCTCGGTGTaGGGCCAGTGGTGGGCACGGACAGTGGCCTGGTGCCCATACATA | + |
|
Preference number: 5 (lower is better) Translates to: IRAYESPGSQQVFSV*GQWWARTVAWCPYI Trigger: TATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATACCTGTTGGCTGCCAGGCGACTCGTAAGCCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CAA 90 bp | TCTATTCGAGGGAGGGTGGGACGCTCTGTCAGAGGCCAATCAGGGGAAGCCCAAGGGAAGAGGCGGGGTTaGAGGGAGCACAGGGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: SIRGRVGRSVRGQSGEAQGKRRG*REHRVT Trigger: GGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCCC...TTGGGCTTCCCCTGATTGGCCTCTGACAGAGCGTCCCACCCTCCCTCGAATAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS TCA 90 bp | GTTAAAGGGACACCCCTCTCCACTGTGTTTCTCAAGCGCTGGTGGTaGGTCAGAATGGGACAGTCACCGGCGTCGCGGAACACGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKGTPLSTVFLKRWW*VRMGQSPASRNTRC Trigger: GCAGCGCGTGTTCCGCGACGCCGGTGACTGTCCCATTCTGACTCACCACCAGCGCTTGAGAAACACAGTGGAGAGGGGTGTCCCTTTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS CCA 90 bp | GCCATTGTAGAGAGAACACTGCAGGTCTCGGAATGGTGTGGTCCCTaGAGGGCAGTCCGGCAGCTGGCACACCCGGTATTCATGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AIVERTLQVSEWCGP*RAVRQLAHPVFMAV Trigger: GACAGCCATGAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCCAGGGACCACACCATTCCGAGACCTGCAGTGTTCTCTCTACAATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 90 bp | TACGAGTCGCCTGGCAGCCAACAGGTATTCTCGGTGTGGGGCCAGTaGTGGGCACGGACAGTGGCCTGGTGCCCATACATATTCTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YESPGSQQVFSVWGQ*WARTVAWCPYIFSS Trigger: ACTCGAGAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATACCTGTTGGCTGCCAGGCGACTCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS TCA 90 bp | GGAGAGTCCACAGCAAGAACGGAAGAAGCGGGAAGAGGCGGGGTTTaGGGGAGCACAGGGTTACCAAGAGGCAGTGAAGAGCAGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GESTARTEEAGRGGV*GSTGLPRGSEEQGQ Trigger: CTGACCCTGCTCTTCACTGCCTCTTGGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCCCGCTTCTTCCGTTCTTGCTGTGGACTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS TCA 90 bp | CCCATACATATTCTCGAGTACGCAGAGGCGTGCGGCTTTTGTAGATaGGCAAGACCCGCACTTCGTAGCGGGTCTCCTGGGCCTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PIHILEYAEACGFCR*ARPALRSGSPGPGG Trigger: ACCGCCAGGCCCAGGAGACCCGCTACGAAGTGCGGGTCTTGCTCATCTACAAAAGCCGCACGCCTCTGCGTACTCGAGAATATGTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 90 bp | GTATTCTCGGTGTGGGGCCAGTGGTGGGCACGGACAGTGGCCTGGTaGCCATACATATTCTCGAGTACGCAGAGGCGTGCGGCTTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSVWGQWWARTVAW*PYIFSSTQRRAAFV Trigger: TACAAAAGCCGCACGCCTCTGCGTACTCGAGAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CAA 90 bp | CTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAGGTTAGCCTGGTCTACGGGAAGAGGCGGGGTTaGAGGGAGCACAGGGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LQRQRQVDYHNFKVSLVYGKRRG*REHRVT Trigger: GGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCCC...GTAGACCAGGCTAACCTTGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGGGAGACCCTGGTTAAAATATATGAGCTTCCAGGTGGGAGGTTTTCCTACCAGCGCCAGGTGGTaGTGGCTGCGCTGTGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: QSGRPWLKYMSFQVGGFPTSARW*WLRCAT Trigger: CGTAGCACAGCGCAGCCACAACCACCTGGCGCTGGT...AGGAAAACCTCCCACCTGGAAGCTCATATATTTTAACCAGGGTCTCCCTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS-3UTR CAA 90 bp | TTTAATCCCAGCACTCACTGCAGAGACAGAGGCAGGTGGATTACCATAACTTCAAAGTGTACGCCTGGGTaGGGCTCCCGCAGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FNPSTHCRDRGRWITITSKCTPG*GSRSST Trigger: GGTGCTGCTGCGGGAGCCCAACCCAGGCGTACACTT...TGAAGTTATGGTAATCCACCTGCCTCTGTCTCTGCAGTGAGTGCTGGGATTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | ACCACGGCTGTCGGGGCATGGCCCGCAGGGGTCTGGTaGCAGGGATGCAACACGGGCAGGGATGGCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TTAVGAWPAGVW*QGCNTGRDGLG Trigger: CCCGAGGCCATCCCTGCCCGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCATGCCCCGACAGCCGTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | GCGACCACGGCTGTCGGGGCATGGCCCGCAGGGGTCTaGTGGCAGGGATGCAACACGGGCAGGGATGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATTAVGAWPAGV*WQGCNTGRDGL Trigger: GAGGCCATCCCTGCCCGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCATGCCCCGACAGCCGTGGTCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 72 bp | AGCGGCCTGCCACGCAGAGACCCTGGGTACCCGGGGTaGAGGGGGTGCCATCCAGCACGCGGCCAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGLPRRDPGYPG*RGCHPARGQSC Trigger: ACAGCTTTGGCCGCGTGCTGGATGGCACCCCCTGCACCCCGGGTACCCAGGGTCTCTGCGTGGCAGGCCGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS GCA 72 bp | CTCGAGGGTGCCGGAGCCCAGTATCCCGTCACAGCCTaGGCTCAGACAGCGGCCTGCCACGCAGAGACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LEGAGAQYPVTA*AQTAACHAETL Trigger: CAGGGTCTCTGCGTGGCAGGCCGCTGTCTGAGCGCAGGCTGTGACGGGATACTGGGCTCCGGCACCCTCGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 72 bp | AAGAAGCCGGTGTGCGCGACCACGGCTGTCGGGGCATaGCCCGCAGGGGTCTGGTGGCAGGGATGCAACACG | + |
|
Preference number: 6 (lower is better) Translates to: KKPVCATTAVGA*PAGVWWQGCNT Trigger: CGTGTTGCATCCCTGCCACCAGACCCCTGCGGGCCATGCCCCGACAGCCGTGGTCGCGCACACCGGCTTCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 72 bp | CCACGCAGAGACCCTGGGTACCCGGGGTGCAGGGGGTaGCATCCAGCACGCGGCCAAAGCTGTGGTAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRRDPGYPGCRG*HPARGQSCGRR Trigger: CCTTCTACCACAGCTTTGGCCGCGTGCTGGATGGCACCCCCTGCACCCCGGGTACCCAGGGTCTCTGCGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS GCA 72 bp | GCGGGTAACCAGCGCCAGGTGGTTGTGGCTGCGCTGTaGTACGCGGATGTGCCTGGCGCCCTCGGGGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGNQRQVVVAAL*YADVPGALGDQ Trigger: TTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACCTGGCGCTGGTTACCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 72 bp | GCACTGAGACGCCCCGACCACAAGAGCTGGAACACCTaGTCCAAGACCCCCAGGGCGTCCACTCTCCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALRRPDHKSWNT*SKTPRASTLPD Trigger: GTCCGGGAGAGTGGACGCCCTGGGGGTCTTGGAGCAGGTGTTCCAGCTCTTGTGGTCGGGGCGTCTCAGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 72 bp | TTGGGCTCCCGCAGCAGCACCTGTAACAGCAGCTCCTaGGAGGTGGGGCCGGTCGCCTGCAGAGTCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGSRSSTCNSSS*EVGPVACRVSS Trigger: AGAGGAGACTCTGCAGGCGACCGGCCCCACCTCCCAGGAGCTGCTGTTACAGGTGCTGCTGCGGGAGCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | CTCCAAGACCCCCAGGGCGTCCACTCTCCCGGACCCTaGGCAGCACCCCTCAAATCACAGCTCAGGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQDPQGVHSPGP*AAPLKSQLRRV Trigger: GACTCTCCTGAGCTGTGATTTGAGGGGTGCTGCCCAGGGTCCGGGAGAGTGGACGCCCTGGGGGTCTTGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
||
| CDS CCA 72 bp | CCCGGGGCAGCCAGAACTCGAAGTGTACGCCTGGGTTaGGCTCCCGCAGCAGCACCTGTAACAGCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGAARTRSVRLG*APAAAPVTAAP Trigger: AGGAGCTGCTGTTACAGGTGCTGCTGCGGGAGCCCAACCCAGGCGTACACTTCGAGTTCTGGCTGCCCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 72 bp | GCCAGGTGGTTGTGGCTGCGCTGTGCTACGCGGATGTaGCTGGCGCCCTCGGGGATCAAAGTCACATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARWLWLRCATRM*LAPSGIKVTFQ Trigger: CTGGAATGTGACTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS GCA 72 bp | GTGTGGGGCCAGTGGTGGGCACGGACAGTGGCCTGGTaGCCATACATATTCTCGAGTACGCAGAGGCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: VWGQWWARTVAW*PYIFSSTQRRA Trigger: CGCACGCCTCTGCGTACTCGAGAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | CGGAATGGTGTGGTCCCTGGAGGGCAGTCCGGCAGCTaGCACACCCGGTATTCATGGCTGTCGCCCCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: RNGVVPGGQSGS*HTRYSWLSPQQ Trigger: TTGTTGGGGCGACAGCCATGAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCCAGGGACCACACCATTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS TCA 72 bp | CTCTCCGGGAAGTCGGACACATTGGCGTCTGCGCACTaGGACGCCCCGACCACAAGAGCTGGAACACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSGKSDTLASAH*DAPTTRAGTPA Trigger: AGCAGGTGTTCCAGCTCTTGTGGTCGGGGCGTCTCAGTGCGCAGACGCCAATGTGTCCGACTTCCCGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS GCA 72 bp | AGAATGGGACAGTCACCGGCGTCGCGGAACACGCGCTaGACGAACAGGCAAGAGTCGTTAGCGCCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: RMGQSPASRNTR*TNRQESLAPPQ Trigger: CTGTGGTGGCGCTAACGACTCTTGCCTGTTCGTGCAGCGCGTGTTCCGCGACGCCGGTGACTGTCCCATTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
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| CDS CCA 72 bp | GGAGGGCAGTCCGGCAGCTGGCACACCCGGTATTCATaGCTGTCGCCCCAACAAAGTTCCTCTCCGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGQSGSWHTRYS*LSPQQSSSPGS Trigger: ACTTCCCGGAGAGGAACTTTGTTGGGGCGACAGCCATGAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
||
| CDS CCA 72 bp | GAGAGAACACTGCAGGTCTCGGAATGGTGTGGTCCCTaGAGGGCAGTCCGGCAGCTGGCACACCCGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: ERTLQVSEWCGP*RAVRQLAHPVF Trigger: GAATACCGGGTGTGCCAGCTGCCGGACTGCCCTCCAGGGACCACACCATTCCGAGACCTGCAGTGTTCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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| CDS CCA 72 bp | GGTGGTTGTGGCTGCGCTGTGCTACGCGGATGTGCCTaGCGCCCTCGGGGATCAAAGTCACATTCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGCGCAVLRGCA*RPRGSKSHSRS Trigger: GCTTCTGGAATGTGACTTTGATCCCCGAGGGCGCCAGGCACATCCGCGTAGCACAGCGCAGCCACAACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | TCGGTGTGGGGCCAGTGGTGGGCACGGACAGTGGCCTaGTGCCCATACATATTCTCGAGTACGCAGAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SVWGQWWARTVA*CPYIFSSTQRR Trigger: ACGCCTCTGCGTACTCGAGAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
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| CDS CCA 72 bp | CCTGGCAGCCAACAGGTATTCTCGGTGTGGGGCCAGTaGTGGGCACGGACAGTGGCCTGGTGCCCATACATA | + |
|
Preference number: 6 (lower is better) Translates to: PGSQQVFSVWGQ*WARTVAWCPYI Trigger: TATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATACCTGTTGGCTGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
||
| CDS TCA 72 bp | AGCTGTGGTAGAAGGCGTGGCCTTCAGCTAGGCAGTTaGGGTCACACACATTGGGCGCCCCGTGGAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SCGRRRGLQLGS*GHTHWAPRGRA Trigger: TGCCCTTCCACGGGGCGCCCAATGTGTGTGACCTCAACTGCCTAGCTGAAGGCCACGCCTTCTACCACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
||
| CDS CCA 72 bp | GTGGCCATTGTAGAGAGAACACTGCAGGTCTCGGAATaGTGTGGTCCCTGGAGGGCAGTCCGGCAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VAIVERTLQVSE*CGPWRAVRQLA Trigger: TGCCAGCTGCCGGACTGCCCTCCAGGGACCACACCATTCCGAGACCTGCAGTGTTCTCTCTACAATGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
||
| CDS CCA 72 bp | GGCAGCCAACAGGTATTCTCGGTGTGGGGCCAGTGGTaGGCACGGACAGTGGCCTGGTGCCCATACATATTC | + |
|
Preference number: 6 (lower is better) Translates to: GSQQVFSVWGQW*ARTVAWCPYIF Trigger: GAATATGTATGGGCACCAGGCCACTGTCCGTGCCCACCACTGGCCCCACACCGAGAATACCTGTTGGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
||
| CDS CCA 72 bp | CCACTGTGTTTCTCAAGCGCTGGTGGTGAGTCAGAATaGGACAGTCACCGGCGTCGCGGAACACGCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLCFSSAGGESE*DSHRRRGTRAA Trigger: TGCAGCGCGTGTTCCGCGACGCCGGTGACTGTCCCATTCTGACTCACCACCAGCGCTTGAGAAACACAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105352.2 |
||
| CDS TCA 72 bp | ATTCTCGAGTACGCAGAGGCGTGCGGCTTTTGTAGATaGGCAAGACCCGCACTTCGTAGCGGGTCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILEYAEACGFCR*ARPALRSGSPG Trigger: CCCAGGAGACCCGCTACGAAGTGCGGGTCTTGCTCATCTACAAAAGCCGCACGCCTCTGCGTACTCGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095446.10 |
||
| CDS TCA 72 bp | ACAGCAAGAACGGAAGAAGCGGGAAGAGGCGGGGTTTaGGGGAGCACAGGGTTACCAAGAGGCAGTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TARTEEAGRGGV*GSTGLPRGSEE Trigger: CTCTTCACTGCCTCTTGGTAACCCTGTGCTCCCTCAAACCCCGCCTCTTCCCGCTTCTTCCGTTCTTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095446.10 ENSMUST00000105352.2 |
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