RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTSL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070469

Ensembl transcript IDs: ENSMUST00000172784.2, ENSMUST00000173287.8, ENSMUST00000173828.3

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCAACACAACCTGCCTCAGGAAAGGTTGTGTGCCAGGAGGCCGTaGGTGCTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACA +
Preference number: 1 (lower is better)
Translates to: VQHNLPQERLCARRP*VLCVQAAGTPSKET
Trigger: TGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAGCACCCACGGCCTCCTGGCACACAACCTTTCCTGAGGCAGGTTGTGTTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR GCA 90 bp TGCCTCAGGAAAGGTTGTGTGCCAGGAGGCCGTGGGTGCTATGTGTaGAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTT +
Preference number: 1 (lower is better)
Translates to: CLRKGCVPGGRGCYV*KQPGHRVKKQDHLF
Trigger: AAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAGCACCCACGGCCTCCTGGCACACAACCTTTCCTGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR TCA 90 bp GCACAGCAGCATCACAACCTTGCCAAAGCTTTACCCTTCTTGACATaGCTGGCAGCACCTTTGTCTGTAGACGGCCAGAGAGCACAGGTT +
Preference number: 1 (lower is better)
Translates to: AQQHHNLAKALPFLT*LAAPLSVDGQRAQV
Trigger: AACCTGTGCTCTCTGGCCGTCTACAGACAAAGGTGCTGCCAGTCATGTCAAGAAGGGTAAAGCTTTGGCAAGGTTGTGATGCTGCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
3UTR GCA 90 bp AGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTaGCGTTCACATGTTGATCAGGAGGTAGGTCCAACACAACCTGCC +
Preference number: 1 (lower is better)
Translates to: RGSASLSTNKPKATM*RSHVDQEVGPTQPA
Trigger: GGCAGGTTGTGTTGGACCTACCTCCTGATCAACATGTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR TCA 90 bp CCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACATGTTaGTCAGGAGGTAGGTCCAACACAACCTGCCTCAGGAAAGGTTGT +
Preference number: 1 (lower is better)
Translates to: PLYKQTQSHNVPFTC*SGGRSNTTCLRKGC
Trigger: ACAACCTTTCCTGAGGCAGGTTGTGTTGGACCTACCTCCTGATCAACATGTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR CCA 90 bp GTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTaGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGG +
Preference number: 1 (lower is better)
Translates to: VQAAGTPSKETGPLI*GCAASKATTGKISW
Trigger: CCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR TCA 90 bp GATCTTTGTTTTAATTTAATAAGTCCAACAATCGTATGTGATTGCTaGCTAACAACTCAAGGGCTGGTGTGCTTCTTCCTGTCCCTGTCT +
Preference number: 1 (lower is better)
Translates to: DLCFNLISPTIVCDC*LTTQGLVCFFLSLS
Trigger: AGACAGGGACAGGAAGAAGCACACCAGCCCTTGAGTTGTTAGTCAGCAATCACATACGATTGTTGGACTTATTAAATTAAAACAAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR TCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAGTGCTAGTCCAAGATaGATTCAGCCCTTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: LCSEDGREAQQASLQTNPSASPR*IQPFFP
Trigger: GGGAAAGAAGGGCTGAATTCATCTTGGACTAGCACT...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR CCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCATGTACCATTCTTCGCTaGTTTACAAAGCACAGCAGG +
Preference number: 2 (lower is better)
Translates to: LCSEDGREAQQASLQTNPCTILR*FTKHSR
Trigger: CCTGCTGTGCTTTGTAAACCAGCGAAGAATGGTACA...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR TCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCGCAACACATTGCTGTTaGTGCATTTGTGTTAGTCCT +
Preference number: 2 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPATHCC*CICVSP
Trigger: AGGACTAACACAAATGCATCAACAGCAATGTGTTGC...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR TCA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGATTACCCTTCTTGACATaGCTGGCAGCACCTTTGTCT +
Preference number: 2 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRLPFLT*LAAPLS
Trigger: AGACAAAGGTGCTGCCAGTCATGTCAAGAAGGGTAA...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
3UTR CAA 90 bp GGCTACTGGCCAAAACCTTTAAAACATAAATACTGCATAAATGTGTaGAAACTCTACAACTTGAGCGAAGTCCTCAGTTGCAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: GYWPKPLKHKYCINV*KLYNLSEVLSCRLQ
Trigger: CTGAAGTCTGCAACTGAGGACTTCGCTCAAGTTGTAGAGTTTCAACACATTTATGCAGTATTTATGTTTTAAAGGTTTTGGCCAGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR GCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGGCAGCATCACAACCTTaGCAAAGCTTTACCCTTCTT +
Preference number: 2 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWAASQP*QSFTLL
Trigger: AAGAAGGGTAAAGCTTTGGCAAGGTTGTGATGCTGC...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
3UTR CCA 72 bp AACCTGCCTCAGGAAAGGTTGTGTGCCAGGAGGCCGTaGGTGCTATGTGTGCAAGCAGCCGGGACACCGAGT +
Preference number: 3 (lower is better)
Translates to: NLPQERLCARRP*VLCVQAAGTPS
Trigger: ACTCGGTGTCCCGGCTGCTTGCACACATAGCACCCACGGCCTCCTGGCACACAACCTTTCCTGAGGCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR GCA 72 bp GTAGGTCCAACACAACCTGCCTCAGGAAAGGTTGTGTaGCAGGAGGCCGTGGGTGCTATGTGTGCAAGCAGC +
Preference number: 3 (lower is better)
Translates to: VGPTQPASGKVV*QEAVGAMCASS
Trigger: GCTGCTTGCACACATAGCACCCACGGCCTCCTGGCACACAACCTTTCCTGAGGCAGGTTGTGTTGGACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR GCA 72 bp TCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTaGTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCT +
Preference number: 3 (lower is better)
Translates to: SVRLKLECERDL*SEDGREAQQAS
Trigger: AGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR CAA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGATCCAAGATGCCTTATTaGGCCACAGATAGGCTTCCG +
Preference number: 3 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGSKMPY*ATDRLP
Trigger: CGGAAGCCTATCTGTGGCCAAATAAGGCATCTTGGA...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR TCA 72 bp CATCACAACCTTGCCAAAGCTTTACCCTTCTTGACATaGCTGGCAGCACCTTTGTCTGTAGACGGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: HHNLAKALPFLT*LAAPLSVDGQR
Trigger: TCTCTGGCCGTCTACAGACAAAGGTGCTGCCAGTCATGTCAAGAAGGGTAAAGCTTTGGCAAGGTTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
3UTR GCA 72 bp GCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTaGCGTTCACATGTTGATCAGGAGGTAGGTCCAACA +
Preference number: 3 (lower is better)
Translates to: ASLSTNKPKATM*RSHVDQEVGPT
Trigger: TGTTGGACCTACCTCCTGATCAACATGTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR-3UTR CAA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCAGCTTTTCCTCTTCTTaGATTTCCAAGATGCCTTAT +
Preference number: 3 (lower is better)
Translates to: VFIPVSVRLKLECERDLCSFSSS*ISKMPY
Trigger: ATAAGGCATCTTGGAAATCAAAGAAGAGGAAAAGCT...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR CCA 72 bp GCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTaGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAA +
Preference number: 3 (lower is better)
Translates to: AGTPSKETGPLI*GCAASKATTGK
Trigger: TTTACCAGTTGTAGCTTTAGATGCTGCACAACCCCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR CCA 72 bp AAGACAATGTTATCTGTGGAGAATCCTTGGCTCGGTTaGTGTTATAAGCTGTCCAGTGAGGTTGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: KTMLSVENPWLG*CYKLSSEVVSS
Trigger: AGAGGAGACAACCTCACTGGACAGCTTATAACACCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR CCA 72 bp TTAAGAGTGAAGACAATGTTATCTGTGGAGAATCCTTaGCTCGGTTGGTGTTATAAGCTGTCCAGTGAGGTT +
Preference number: 3 (lower is better)
Translates to: LRVKTMLSVENP*LGWCYKLSSEV
Trigger: AACCTCACTGGACAGCTTATAACACCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTTCACTCTTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR TCA 72 bp ATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTaGTCATCGTGTCTAGAGACTTTAAGAGTACGTGGT +
Preference number: 3 (lower is better)
Translates to: IVSGTVSALTST*SSCLETLRVRG
Trigger: ACCACGTACTCTTAAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173287.8
3UTR TCA 72 bp TTTAATTTAATAAGTCCAACAATCGTATGTGATTGCTaGCTAACAACTCAAGGGCTGGTGTGCTTCTTCCTG +
Preference number: 3 (lower is better)
Translates to: FNLISPTIVCDC*LTTQGLVCFFL
Trigger: CAGGAAGAAGCACACCAGCCCTTGAGTTGTTAGTCAGCAATCACATACGATTGTTGGACTTATTAAATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTCAGGCCCGCACGTGGTaGTGCAGGCTGACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSQARTW*CRLTRA
Trigger: AGCCCTGGTCAGCCTGCAGCACCACGTGCGGGCCTG...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTGCCAGGCCCGCACGTaGTGCTGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCACQART*CCRLTR
Trigger: CCTGGTCAGCCTGCAGCACCACGTGCGGGCCTGGCA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGACGCACCTCACGAACCTaGATGCCAGGCCCGCACGTG +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGRTSRT*MPGPHV
Trigger: CACGTGCGGGCCTGGCATTCAGGTTCGTGAGGTGCG...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCCACGAGGGGGAGCCCTaGCAGGTCCCTGCACAGCGT +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSHEGEP*QVPAQR
Trigger: ACGCTGTGCAGGGACCTGCCAGGGCTCCCCCTCGTG...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAGCCCCTGCCACAGACTaGTGTACAGGGCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPAPATD*CTGLPG
Trigger: CCCTGGAAGCCCTGTACAGCAGTCTGTGGCAGGGGC...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCGGACCACGCTGCCTTTaGCCACGGTGTACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VFIPVSVRLKLECERDLCGPRCL*PRCTWS
Trigger: AGACCAGGTACACCGTGGCCAAAGGCAGCGTGGTCC...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGCGTGGTGCTGCAGGCTaGCCAGGGCTCTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVRGAAG*PGLWDE
Trigger: TTCATCCCAGAGCCCTGGTCAGCCTGCAGCACCACG...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGCTCTGGTCACAGGCTTaGCGGAGGCAGGGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWLWSQA*RRQGRS
Trigger: TGACCGACCCTGCCTCCGTCAAGCCTGTGACCAGAG...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGAGCTGAGCCTCAGGTaGAACTTCCTCACGGATGCC +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCAELSLR*NFLTDA
Trigger: GGCATCCGTGAGGAAGTTGCACCTGAGGCTCAGCTC...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACTCCGGCAGCCAGCTGTaGGGGGCAGTCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNSGSQL*GAVCPG
Trigger: GCCAGGACAGACTGCCCCCCACAGCTGGCTGCCGGA...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGATCACTTCCTGACCACTaGCCATCACACACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGSLPDH*PSHTGA
Trigger: GGCCCCGGTGTGTGATGGCCAGTGGTCAGGAAGTGA...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTCCATGTTACAGGCCTaGCTCATTGGTGGAGGACGG +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCASMLQA*LIGGGR
Trigger: CCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTCCCAGGCGTCCCAGTTaGCATCCTTGTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSPRRPS*HPCLLL
Trigger: CAGAAGAAGACAAGGATGGCAACTGGGACGCCTGGG...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAAGCGTGACACTTGAGTaGACATGGGGCAGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGSVTLE*TWGSRV
Trigger: GACCCTGCTGCCCCATGTGCACTCAAGTGTCACGCT...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGGAAGGCCCGAGACAGTaGCTCCAGGCAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVEGPRQ*LQAAGF
Trigger: GAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTC...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTGCAGCGCTCCATCCTTaGTCCATGTGTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSAALHP*SMCMWP
Trigger: AGGCCACATACACATGGACCAAGGATGGAGCGCTGC...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCCTGCTTCTGGGTGCCTaGAGAACTCGCGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCALLLGA*RTRVFW
Trigger: CCAGAAAACGCGAGTTCTCCAGGCACCCAGAAGCAG...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGGGTGCTGCATCCTCGTaGCATGGCCCATGCAACGTC +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVGAASS*HGPCNV
Trigger: GACGTTGCATGGGCCATGCCACGAGGATGCAGCACC...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ACCTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCATCATAGCGGTATGTaGGGAACTGCTCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TCAQKMAERLSKPLYKQTHHSGM*GTAPLW
Trigger: CCACAGGGGAGCAGTTCCTCACATACCGCTATGATG...GGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ACCTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCACACAGGCTGTCATTaGCGGTCTGATGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TCAQKMAERLSKPLYKQTHTGCH*RSDESG
Trigger: CCCAGACTCATCAGACCGTCAATGACAGCCTGTGTG...GGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCATCTTGACAGAGGGTTaGAGCAGCGCTCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: VFIPVSVRLKLECERDLCILTEG*SSAPSL
Trigger: CAAGGATGGAGCGCTGCTGCAACCCTCTGTCAAGAT...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCCTTGGGGACACCACCTaGACAGTCCCATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VFIPVSVRLKLECERDLCLGDTT*TVPLAF
Trigger: AAAAGCCAATGGGACTGTGCAGGTGGTGTCCCCAAG...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACGTCTTTAGGAGCACATaGCCTTGGGGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHVFRST*PWGHHL
Trigger: CAGGTGGTGTCCCCAAGGGCATGTGCTCCTAAAGAC...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAGAATGCAGTCGACTTTaGGAGACTGGAAGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPECSRL*ETGSPC
Trigger: GCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTC...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTACTGAGACCACTCCATaGCAACCCACTTGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSTETTP*QPTWGN
Trigger: ATTGCCCCAAGTGGGTTGCCATGGAGTGGTCTCAGT...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACGGGTCGGTCAGTGGGTaGCTTGGGGCCTTCACACTC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNGSVSG*LGAFTL
Trigger: GAGTGTGAAGGCCCCAAGCCACCCACTGACCGACCC...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGGGGGGCAGTCTGTCCTaGCACAGGACTTATGAGACG +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWGGSLS*HRTYET
Trigger: CGTCTCATAAGTCCTGTGCCAGGACAGACTGCCCCC...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCCCAAGGGACCACAAGTaGCAGAACAGTGTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCAPRDHK*QNSVSS
Trigger: ACTGGACACACTGTTCTGCCACTTGTGGTCCCTTGG...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTGAAGTCTTCTGCATCTaGTGGGCAGTCGTGATTGCT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSEVFCI*WAVVIA
Trigger: AGCAATCACGACTGCCCAGCAGATGCAGAAGACTTC...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTGCCCTGGCAGGTCCCTaGACAGCGTCTCAGCTACGG +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFALAGP*TASQLR
Trigger: CCGTAGCTGAGACGCTGTGCAGGGACCTGCCAGGGC...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTGGATTGTCACATTTaGTTGAAGGGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCAVDCHI*LKGCLH
Trigger: GTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCAC...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCAAGCAGTGTGGTGGTaGTGCATCCTCGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQQAVWW*CILVAW
Trigger: CCATGCCACGAGGATGCAGCACCACCACACTGCTTG...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCACACTTGAGTGCACATaGGGCAGCAGGGTCATTGTA +
Preference number: 4 (lower is better)
Translates to: VFIPVSVRLKLECERDLCTLECT*GSRVIV
Trigger: TACAATGACCCTGCTGCCCCATGTGCACTCAAGTGT...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTCACAGCCCACAATCTaGCAGATGCCACTTATGCAC +
Preference number: 4 (lower is better)
Translates to: GREAQQASLQTNPKPQCASQPTI*QMPLMH
Trigger: GTGCATAAGTGGCATCTGCCAGATTGTGGGCTGTGA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGGCATCACCGTGGGCTTaGGTGCATACATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWASPWA*VHTCTS
Trigger: GGAAGTGCATGTATGCACCCAAGCCCACGGTGATGC...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAGATGCCTTGGGTCCTTaGCACAGCTCATCCGACAAA +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPDALGP*HSSSDK
Trigger: TTTGTCGGATGAGCTGTGCCAAGGACCCAAGGCATC...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAAGGACACTGGTTTCCTaGGTCGATGGCCTGTTGAAC +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGRTLVS*VDGLLN
Trigger: GTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCT...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGGAACAAGCAGTGTGGTaGTGCTGCATCCTCGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWEQAVW*CCILVA
Trigger: TGCCACGAGGATGCAGCACCACCACACTGCTTGTTC...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTACATCGGAACCCAGATaGCTGGCTACAGAACATTCA +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSTSEPR*LATEHS
Trigger: TGAATGTTCTGTAGCCAGTCATCTGGGTTCCGATGT...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACCGGATGTTACAGGACTaGAACCCAGCCAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNRMLQD*NPASGF
Trigger: GAAGCCGCTGGCTGGGTTTCAGTCCTGTAACATCCG...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCATTCTCTGCTGTAGCCTaGAGAAGACCAGAGACCGTA +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPFSAVA*RRPETV
Trigger: TACGGTCTCTGGTCTTCTGCAGGCTACAGCAGAGAA...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGACTCCACATGTCACGGTaGAGGGAAAGAAGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGLHMSR*RERSQS
Trigger: AGACTGACTTCTTTCCCTGCACCGTGACATGTGGAG...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGCACCGTGGGCTTGGGTaGATACATGCACTTCCATTC +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWHRGLG*IHALPF
Trigger: GAATGGAAGTGCATGTATGCACCCAAGCCCACGGTG...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGACAGGCCTGACTCATTaGTGGAGGACGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWTGLTH*WRTVNC
Trigger: ACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGT...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCATATGAGACGATGCCTTaGGTCCTTGGCACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPYETMP*VLGTAH
Trigger: ATGAGCTGTGCCAAGGACCCAAGGCATCGTCTCATA...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ACCTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCCTGCACAGTCCCATTaGCTTTTGTCTGCTTGCATG +
Preference number: 4 (lower is better)
Translates to: TCAQKMAERLSKPLYKQTPAQSH*LLSACM
Trigger: CATGCAAGCAGACAAAAGCCAATGGGACTGTGCAGG...GGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGATTGTCACATTTGCTTaGAGGGCTGCCTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVIVTFA*RAASTV
Trigger: CACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAAT...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAATGTGAGAGAGACCTGTGCCAAGTTACATTAGGCTaGGGGACACCTTTTACAGGA +
Preference number: 4 (lower is better)
Translates to: VFIPVSVRLKLECERDLCQVTLG*GTPFTG
Trigger: TCCTGTAAAAGGTGTCCCTCAGCCTAATGTAACTTG...GCACAGGTCTCTCTCACATTCCAACTTCAGCCTCACCGACACTGGGATGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTTCCTTCATTTTCGAGTaGAGCACTCTGCAACAACAG +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSSFIFE*STLQQQ
Trigger: CTGTTGTTGCAGAGTGCTTCACTCGAAAATGAAGGA...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACGCTTCACTCACTTCCTaGCCACTGGCCATCACACAC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNASLTS*PLAITH
Trigger: GTGTGTGATGGCCAGTGGTCAGGAAGTGAGTGAAGC...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACGAAGGGGGTAGAATTTaGCTCATGAGAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHEGGRI*LMRTGP
Trigger: AGGACCTGTTCTCATGAGGCAAATTCTACCCCCTTC...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGTCACTGTCCTTCTCTTaGAGACGGCCACCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQSLSFS*RRPPSS
Trigger: AGAACTGGGTGGCCGTCTCCAAGAGAAGGACAGTGA...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGATGTAAACCACCTTGCTaGGCAATCCCGGATGTTACA +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGCKPPC*AIPDVT
Trigger: TGTAACATCCGGGATTGCCCAGCAAGGTGGTTTACA...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACACAAAACTCCGTCTCTaGATCCCTCCTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNTKLRL*IPPPQD
Trigger: GTCCTGTGGAGGAGGGATTCAGAGACGGAGTTTTGT...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GATGCTTTAAGAGTGAAGACAATGTTATCTGTGGAGAATCCTTGGCTCGGTTGGACAGCTGTCGACAGGTaGCTCTCCGGTTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: DALRVKTMLSVENPWLGWTAVDR*LSGSEF
Trigger: GAACTCAGAACCGGAGAGTCACCTGTCGACAGCTGT...CCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTTCACTCTTAAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCTTACCCTTCTTGACATaGCTGGCAGCACCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSLPFLT*LAAPLS
Trigger: AGACAAAGGTGCTGCCAGTCATGTCAAGAAGGGTAA...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGAGCTGTGCTCTCCTCTaGTTCCTTGAAGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVSCALL*FLEVFW
Trigger: CCAAAACACTTCAAGGAAGCAGAGGAGAGCACAGCT...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCGGCAATCAAAGAGGTTaGAAGCCTGCATCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPGNQRG*KPASPW
Trigger: CCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCC...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCTCGAGTGAAGCACTCTaGAACAACAGGGATCCATTG +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSSSEAL*NNRDPL
Trigger: CAATGGATCCCTGTTGTTGCAGAGTGCTTCACTCGA...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CTCAGCACAGCAGCATCACAACCTTGCCAAAGCTTTACCCTTCTTGACATGACTTGTCCGCCACAATTTTaGAGCTCCCTGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: LSTAASQPCQSFTLLDMTCPPQF*SSLCEC
Trigger: GCATTCACACAGGGAGCTGCAAAATTGTGGCGGACA...AGTCATGTCAAGAAGGGTAAAGCTTTGGCAAGGTTGTGATGCTGCTGTGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
CDS-3UTR CCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTCTCTGGGATGAACTTTaGTTCTTCTGTGGCTATTCT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSLWDEL*FFCGYS
Trigger: AGAATAGCCACAGAAGAACCAAAGTTCATCCCAGAG...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGGAGTTCTTCAGACAATaGCCATCCTTCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQEFFRQ*PSFSHW
Trigger: CCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTC...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTGCATTTTATGCCATGTaGCTCCCAAACTATTGGCTT +
Preference number: 4 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSAFYAM*LPNYWL
Trigger: AAGCCAATAGTTTGGGAGCCACATGGCATAAAATGC...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ACCTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCATGCTCCCTGTTTCATaGCTGCTTCAAACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TCAQKMAERLSKPLYKQTMLPVS*LLQTAC
Trigger: ACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCAT...GGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACTCTCCTCTGCTTCCTTaGAGTGTTTTGGACTCAATA +
Preference number: 4 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHSPLLP*SVLDSI
Trigger: TATTGAGTCCAAAACACTTCAAGGAAGCAGAGGAGA...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGACAGCAATGGCTTCTTaGTGGCCTCCCAAACATGTT +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQTAMAS*WPPKHV
Trigger: AACATGTTTGGGAGGCCATCAAGAAGCCATTGCTGT...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATCTGGCACAGGACTTATaGGACGATGCCTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYLAQDL*DDALGP
Trigger: AGGACCCAAGGCATCGTCTCATAAGTCCTGTGCCAG...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGGGCAGATGCCACTTATaGACATATCCAGAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQGRCHL*TYPESQ
Trigger: CTGACTCTCTGGATATGTGCATAAGTGGCATCTGCC...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTGCCTCCCAAACATGTTaGAGTGCAGGGGGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFASQTC*SAGGKA
Trigger: GGCTTTACCCCCTGCACTGCAACATGTTTGGGAGGC...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCGGCAATCAAACTGATTaGACGCTCGTAAGGCATGCG +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPGNQTD*TLVRHA
Trigger: CGCATGCCTTACGAGCGTGCAATCAGTTTGATTGCC...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACTCCCTGTTTCATGGCTaGTTCAAACTGCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHSLFHG*FKLLVL
Trigger: AAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGA...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCTGTGTCCATGCTGTATaGTCCCTGTTTCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPCVHAV*SLFHGC
Trigger: GCAGCCATGAAACAGGGAGCATACAGCATGGACACA...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCGAGCATTGGTGGCTGTaGAAATGTAGGTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSEHWWL*KCRFLH
Trigger: ATGAAGGAACCTACATTTGCACAGCCACCAATGCTC...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATGCAGCTGGTTTCACCTaGACACAGTATCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYAAGFT*TQYLSA
Trigger: GGCGGACAGATACTGTGTGCAGGTGAAACCAGCTGC...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACTTCCATCCAACACTTTaGGTGCCAGCTCTACCACCA +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNFHPTL*VPALPP
Trigger: TGGTGGTAGAGCTGGCACCCAAAGTGTTGGATGGAA...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGTCCCAAGAGCATTGGTaGCTGTGCAAATGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQSQEHW*LCKCRF
Trigger: GAACCTACATTTGCACAGCCACCAATGCTCTTGGGA...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GATGCTTTAAGAGTGAAGACAATGTTATCTGTGGAGAATCCTTGGCTCGGTTGGCCTCACAGTCAGAGCTaGAGCTGTTGTGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: DALRVKTMLSVENPWLGWPHSQS*SCCGNK
Trigger: CTTGTTCCCACAACAGCTCCAGCTCTGACTGTGAGG...CCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTTCACTCTTAAAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTTTTCTGTCTTCCCTCTaGGCTGAGCCTCAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFFLSSL*AEPQVQ
Trigger: TTGCACCTGAGGCTCAGCTCAGAGGGAAGACAGAAA...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCACAACAACAGACAGATaGTTGTGTTCTGGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSTTTDR*LCSGLV
Trigger: CACCAAACCAGAACACAATCATCTGTCTGTTGTTGT...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCACAGGACACCGAACATaGAGTCCAGGGATTATGTTC +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPTGHRT*SPGIMF
Trigger: GAACATAATCCCTGGACTGCATGTTCGGTGTCCTGT...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATGGACTTATGAGACGATaGCTTGGGTCCTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYGLMRR*LGSLAQ
Trigger: CTGTGCCAAGGACCCAAGGCATCGTCTCATAAGTCC...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGATGGCTGCTTCAAACTaGTTGTTCTTAAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: ALVLALMYLPFSPNRILVMAASN*LFLNSQ
Trigger: CTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGCCAT...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATCCCAGAGGTTGCCACTaGTTTCCCAAGAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYPRGCH*FPKSIG
Trigger: ACCAATGCTCTTGGGAAAGCAGTGGCAACCTCTGGG...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACTATTCTGCTTCTGGGTaGCTGGAGAACTCGCGTTTT +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNYSASG*LENSRF
Trigger: AAAACGCGAGTTCTCCAGGCACCCAGAAGCAGAATA...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACTGGCTTTTGTCTGCTTaGATGTCACTTGCCGACTGT +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNWLLSA*MSLADC
Trigger: ACAGTCGGCAAGTGACATGCAAGCAGACAAAAGCCA...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCTTCTGTGGCTATTCTaGTCTCTTCTAGCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQLLWLF*SLLALV
Trigger: CACAAGAGCTAGAAGAGACCAGAATAGCCACAGAAG...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAATAAGCTCATCAAATTaGGCTGTGTCCATGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LCSEDGREAQQASLQTNPISSSN*AVSMLY
Trigger: ATACAGCATGGACACAGCCCAATTTGATGAGCTTAT...TGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTGTCTCCACTGATGGCTaGTGGGCTGGTAAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFVSTDG*WAGKRR
Trigger: TCTTCTTTTACCAGCCCATCAGCCATCAGTGGAGAC...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGACAACAGGGATCCATTaGAAAGCAAGGAAACATTGT +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWTTGIH*KARKHC
Trigger: ACAATGTTTCCTTGCTTTTCAATGGATCCCTGTTGT...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATTCCCAAAAGTGCTCTTaGGGCAGGGACTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYSQKCS*GRDFPV
Trigger: AACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGA...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGATTGCAGCTCCCTGTGTaGATGCAGTCGACTTTGCGA +
Preference number: 4 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRLQLPV*MQSTLR
Trigger: TCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAA...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGGAAGGCCCGAGACAGTaGCTCCAGGCAGCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWEGPRQ*LQAAGF
Trigger: GAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTC...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCGCATTCCTTCAGCTTTaGTTTAGGCTTCACATTTTC +
Preference number: 4 (lower is better)
Translates to: TRDTGKRASLALASQHSSAFLQL*FRLHIF
Trigger: GAAAATGTGAAGCCTAAACCAAAGCTGAAGGAATGC...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGACTTTGGTTCTTCTGTaGCTATTCTGGTCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWTLVLL*LFWSLL
Trigger: TAGAAGAGACCAGAATAGCCACAGAAGAACCAAAGT...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGGGTCAGTGGGTGGCTTaGGGCCTTCACACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWGQWVA*GLHTPP
Trigger: AGGAGGAGTGTGAAGGCCCCAAGCCACCCACTGACC...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGACAGATGATTGTGTTCTaGTTTGGTGACATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGQMIVF*FGDISF
Trigger: GAAAGAAATGTCACCAAACCAGAACACAATCATCTG...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTTGTTTATTCTGCTTCTaGGTGCCTGGAGAACTCGCG +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFCLFCF*VPGELA
Trigger: CGCGAGTTCTCCAGGCACCCAGAAGCAGAATAAACA...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACAACACCACAGGTAGCTaGACAGGCTCCCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNNTTGS*TGSPRA
Trigger: GGCTCTTGGGGAGCCTGTTCAGCTACCTGTGGTGTT...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp TACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCATCACAACTGTAGAATCTCTGCATaGATAGATTCCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: YWEKSLFSFSFSAQQHHNCRISA*IDSSTH
Trigger: GTGTGTGGAGGAATCTATGCATGCAGAGATTCTACA...GTTGTGATGCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCGCTCTTAAGAAAGGCTaGTTATTCATTTCACCACCG +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPALKKG*LFISPP
Trigger: CGGTGGTGAAATGAATAAGCAGCCTTTCTTAAGAGC...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGGTAGGATTTCGTATTTaGATCTTCCCAGTTTCATCC +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQVGFRI*IFPVSS
Trigger: GGATGAAACTGGGAAGATGCAAATACGAAATCCTAC...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTCGTGGCATGGCCCATaGAACGTCCAGGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNSWHGP*NVQDTG
Trigger: ACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGA...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGAGGCTTCACATTTTCTaGGTAGTAATGGCAATAGTG +
Preference number: 4 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQRLHIF*VVMAIV
Trigger: CACTATTGCCATTACTACCCAGAAAATGTGAAGCCT...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAGGAGCACATGCCCTTaGGGACACCACCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRRSTCP*GHHLHS
Trigger: ACTGTGCAGGTGGTGTCCCCAAGGGCATGTGCTCCT...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGCATCCTCGTGGCATaGCCCATGCAACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNCILVA*PMQRPG
Trigger: TCCTGGACGTTGCATGGGCCATGCCACGAGGATGCA...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCTTGTCTTCTTCTGAATaGGCATTTCTTGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPLSSSE*AFLEVW
Trigger: CCAGACTTCAAGAAATGCTCATTCAGAAGAAGACAA...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAAACCCCAGGACTGTTaGAGCTGTGCTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRKPQDC*SCALLC
Trigger: GCAGAGGAGAGCACAGCTTCAACAGTCCTGGGGTTT...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp GAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATCAAGTCACTGTGCACTaGGACCACTCCATGGCAACC +
Preference number: 4 (lower is better)
Translates to: EQHIAVDAFVLVLNYILYQVTVH*DHSMAT
Trigger: GGTTGCCATGGAGTGGTCTCAGTGCACAGTGACTTG...ATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTTTGGCAGTCAGTTTTTaGCACACCTGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFLAVSF*HTCFLL
Trigger: GAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAA...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATGTAGAATTTGCCTCATaGGAACAGGTCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYVEFAS*EQVLLA
Trigger: AGCCAAAAGGACCTGTTCTCATGAGGCAAATTCTAC...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGGGCTCTGAAGTCTTCTaGATCTGCTGGGCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWGSEVF*ICWAVV
Trigger: CACGACTGCCCAGCAGATGCAGAAGACTTCAGAGCC...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATTGTTGCTGTTTATTCTaGTTCTGGGTGCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYCCCLF*FWVPGE
Trigger: TTCTCCAGGCACCCAGAAGCAGAATAAACAGCAACA...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACGCAGCTGGTTTCACCTaGACACAGTATCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNAAGFT*TQYLSA
Trigger: GGCGGACAGATACTGTGTGCAGGTGAAACCAGCTGC...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGTAAACACACAGCAATaGCTTCTTGATGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRVNTQQ*LLDGLP
Trigger: TGGGAGGCCATCAAGAAGCCATTGCTGTGTGTTTAC...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATGGCCTGACTCATTGGTaGAGGACGGTGAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: EQHIAVDAFVLVLNYILYGLTHW*RTVNCV
Trigger: GACACAGTTCACCGTCCTCCACCAATGAGTCAGGCC...ATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp GAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATTGGGAACAAGCAGTGTaGTGGTGCTGCATCCTCGTG +
Preference number: 4 (lower is better)
Translates to: EQHIAVDAFVLVLNYILYWEQAV*WCCILV
Trigger: CACGAGGATGCAGCACCACCACACTGCTTGTTCCCA...ATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACGAGCTGGAGCTGTTGTaGGAACAAGCAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNELELL*EQAVWW
Trigger: CCACCACACTGCTTGTTCCCACAACAGCTCCAGCTC...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGTCGACTTTGCGAGACTaGAAGCCCCTGCCACAGACT +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRSTLRD*KPLPQT
Trigger: AGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGA...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACGTCCGTGCAGTTTCCTaGGAGGGGTACGTACTATCA +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNVRAVS*EGYVLS
Trigger: TGATAGTACGTACCCCTCTCAGGAAACTGCACGGAC...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
CDS-3UTR CCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGGGAACTGCTCCCCTGTaGTGTCTTCTAGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRGTAPL*CLLGSF
Trigger: GAAGCTTCCTAGAAGACACCACAGGGGAGCAGTTCC...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGAGAACAGGTCCTTTTaGCTTAAAAGTCAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRENRSF*LKSQLA
Trigger: GGCAAGCTGACTTTTAAGCCAAAAGGACCTGTTCTC...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATTGTCCGCCACAATTTTaGAGCTCCCTGTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: EQHIAVDAFVLVLNYILYCPPQF*SSLCEC
Trigger: GCATTCACACAGGGAGCTGCAAAATTGTGGCGGACA...ATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTCTGGATATAGACTCTaGGGACACCAAGAATCTGGG +
Preference number: 4 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNSGYRL*GHQESG
Trigger: CCCAGATTCTTGGTGTCCGCAGAGTCTATATCCAGA...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGCCATTGGCTTTTGTCTaGTTGCATGTCACTTGCCGA +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRPLAFV*LHVTCR
Trigger: TCGGCAAGTGACATGCAAGCAGACAAAAGCCAATGG...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGCTTTCCCAAGAGCATTaGTGGCTGTGCAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWLSQEH*WLCKCR
Trigger: CCTACATTTGCACAGCCACCAATGCTCTTGGGAAAG...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR TCA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGTGCAAGTCTTGTATCTaGTGTTCTGTCCTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWCKSCI*CSVLRS
Trigger: ACTGCGAAGGACAGAACATCAGATACAAGACTTGCA...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGGGCAAGGATCCATACTaGATTCCTTCAGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRGKDPY*IPSALV
Trigger: AACCAAAGCTGAAGGAATGCAGTATGGATCCTTGCC...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp GAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATGCTTGGGTGCATACATaGACTTCCATTCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: EQHIAVDAFVLVLNYILYAWVHT*TSILPL
Trigger: AAGTGGAAGAATGGAAGTGCATGTATGCACCCAAGC...ATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
3UTR CAA 72 bp CATAAATACTGCATAAATGTGTTGAAACTCTACAACTaGAGCGAAGTCCTCAGTTGCAGACTTCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: HKYCINVLKLYN*SEVLSCRLQDV
Trigger: TACATCCTGAAGTCTGCAACTGAGGACTTCGCTCAAGTTGTAGAGTTTCAACACATTTATGCAGTATTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR GCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGTTGGTGATGCCAAGCTaGTTAGAGTTCTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRLVMPS*LEFFRQ
Trigger: TTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAA...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CCA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGCGGAACCCAGATGACTaGCTACAGAACATTCATATA +
Preference number: 4 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRRNPDD*LQNIHI
Trigger: TATATGAATGTTCTGTAGCCAGTCATCTGGGTTCCG...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp AGGGCTCTGGTCACAGGCTTGACGGAGGCAGGGTCGGTCAGTGGGTaGCTTGGGGCCTTCACACTCCTCCTCAGGGAGCTCAGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: RALVTGLTEAGSVSG*LGAFTLLLRELSLR
Trigger: ACGGAGGCTGAGCTCCCTGAGGAGGAGTGTGAAGGCCCCAAGCCACCCACTGACCGACCCTGCCTCCGTCAAGCCTGTGACCAGAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp GTCTGTGTGAACGTGAGGAGCACCCGACACCGCACCTCACGAACCTaGATGCCAGGCCCGCACGTGGTGCTGCAGGCTGACCAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: VCVNVRSTRHRTSRT*MPGPHVVLQADQGS
Trigger: AGAGCCCTGGTCAGCCTGCAGCACCACGTGCGGGCCTGGCATTCAGGTTCGTGAGGTGCGGTGTCGGGTGCTCCTCACGTTCACACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CAGGAGACAGGTGCATCTTGGTCTGACCCCGCACCAGCCTGCAGGTaGAGCCGTCCCCAGCACAGACGCCACAATTGTCCTCCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: QETGASWSDPAPACR*SRPQHRRHNCPPWH
Trigger: ATGCCAAGGAGGACAATTGTGGCGTCTGTGCTGGGGACGGCTCCACCTGCAGGCTGGTGCGGGGTCAGACCAAGATGCACCTGTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CCCGCAGGTGACAGAGCACTTCGACCAGTCTCCGGCAGCCAGCTGTaGGGGGCAGTCTGTCCTGGCACAGGACTTATGAGACGATGCCTT +
Preference number: 5 (lower is better)
Translates to: PAGDRALRPVSGSQL*GAVCPGTGLMRRCL
Trigger: AAGGCATCGTCTCATAAGTCCTGTGCCAGGACAGACTGCCCCCCACAGCTGGCTGCCGGAGACTGGTCGAAGTGCTCTGTCACCTGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp TTTGCTGCATATAGGCATCTGGCATGGTCTCACGAGGGGGAGCCCTaGCAGGTCCCTGCACAGCGTCTCAGCTACGGAGACTCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: FAAYRHLAWSHEGEP*QVPAQRLSYGDSSA
Trigger: GGCCGAAGAGTCTCCGTAGCTGAGACGCTGTGCAGGGACCTGCCAGGGCTCCCCCTCGTGAGACCATGCCAGATGCCTATATGCAGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CTGTTGTGGGAACAAGCAGTGTGGTGGTGCTGCATCCTCGTGGCATaGCCCATGCAACGTCCAGGACACTGGTTTCCTGGGTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: LLWEQAVWWCCILVA*PMQRPGHWFPGSMA
Trigger: GGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp TGCTGTACAGGGCTTCCAGGGGCCCACACGCCAACATGCTTCACATaGCCCCAAGGTGCAGTTCCTTCCAAAGGCAGGTCTCCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: CCTGLPGAHTPTCFT*PQGAVPSKGRSPSV
Trigger: GACGGAAGGAGACCTGCCTTTGGAAGGAACTGCACCTTGGGGCCATGTGAAGCATGTTGGCGTGTGGGCCCCTGGAAGCCCTGTACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 90 bp GAGGCAGTATACATCTCGTGTCTGGATTCCAACACCACAGGTAGCTaGACAGGCTCCCCAAGAGCCCATGTGCCATCTGGGCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EAVYISCLDSNTTGS*TGSPRAHVPSGRAG
Trigger: CCCTGCCCGCCCAGATGGCACATGGGCTCTTGGGGAGCCTGTTCAGCTACCTGTGGTGTTGGAATCCAGACACGAGATGTATACTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CATGTGGCTCCCAAACTATTGGCTTCATTATGGTCCACCCCAGGGTaGCCCCTCACGTGCTCTCGTAGGGACGGGTGTGCGATGAGTCGG +
Preference number: 5 (lower is better)
Translates to: HVAPKLLASLWSTPG*PLTCSRRDGCAMSR
Trigger: CCGACTCATCGCACACCCGTCCCTACGAGAGCACGTGAGGGGTCACCCTGGGGTGGACCATAATGAAGCCAATAGTTTGGGAGCCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GGGAACAAGCAGTGTGGTGGTGCTGCATCCTCGTGGCATGGCCCATaGAACGTCCAGGACACTGGTTTCCTGGGTCGATGGCCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GNKQCGGAASSWHGP*NVQDTGFLGRWPVE
Trigger: TTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GTGAATGCAGTCGACTTTGCGAGACTGGAAGCCCCTGCCACAGACTaGTGTACAGGGCTTCCAGGGGCCCACACGCCAACATGCTTCACA +
Preference number: 5 (lower is better)
Translates to: VNAVDFARLEAPATD*CTGLPGAHTPTCFT
Trigger: TGTGAAGCATGTTGGCGTGTGGGCCCCTGGAAGCCCTGTACAGCAGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp CCATCTGGGCGGGCAGGGCTCCATGTTACAGGCCTGACTCATTGGTaGAGGACGGTGAACTGTGTCACACAGGCTGTCATTGACGGTCTG +
Preference number: 5 (lower is better)
Translates to: PSGRAGLHVTGLTHW*RTVNCVTQAVIDGL
Trigger: CAGACCGTCAATGACAGCCTGTGTGACACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGAGCCCTGCCCGCCCAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp GTGCCATCTGGGCGGGCAGGGCTCCATGTTACAGGCCTGACTCATTaGTGGAGGACGGTGAACTGTGTCACACAGGCTGTCATTGACGGT +
Preference number: 5 (lower is better)
Translates to: VPSGRAGLHVTGLTH*WRTVNCVTQAVIDG
Trigger: ACCGTCAATGACAGCCTGTGTGACACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGAGCCCTGCCCGCCCAGATGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp TGGAGCTGTTGTGGGAACAAGCAGTGTGGTGGTGCTGCATCCTCGTaGCATGGCCCATGCAACGTCCAGGACACTGGTTTCCTGGGTCGA +
Preference number: 5 (lower is better)
Translates to: WSCCGNKQCGGAASS*HGPCNVQDTGFLGR
Trigger: TCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp CACCGCATGTCCTGGAACACTGCTGCCACTCTTCGATGTGCCAGCTaGGAGGGCAATCAAACTGATTGCACGCTCGTAAGGCATGCGGCT +
Preference number: 5 (lower is better)
Translates to: HRMSWNTAATLRCAS*EGNQTDCTLVRHAA
Trigger: AGCCGCATGCCTTACGAGCGTGCAATCAGTTTGATTGCCCTCCCAGCTGGCACATCGAAGAGTGGCAGCAGTGTTCCAGGACATGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTGGACCACGCTGCCTTaGGCCACGGTGTACCTGGTC +
Preference number: 5 (lower is better)
Translates to: GREAQQASLQTNPKPQCAWTTLP*ATVYLV
Trigger: GACCAGGTACACCGTGGCCAAAGGCAGCGTGGTCCA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp TGCCAGGCCCGCACGTGGTGCTGCAGGCTGACCAGGGCTCTGGGATaGACTTTGGTTCTTCTGTGGCTATTCTGGTCTCTTCTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: CQARTWCCRLTRALG*TLVLLWLFWSLLAL
Trigger: AAGAGCTAGAAGAGACCAGAATAGCCACAGAAGAACCAAAGTTCATCCCAGAGCCCTGGTCAGCCTGCAGCACCACGTGCGGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp AAGCTGCCATCAGTTAACAGCTGTCGACAGGTGACTCTCCGGTTCTaGGTTCCCCCACCGCATGTCCTGGAACACTGCTGCCACTCTTCG +
Preference number: 5 (lower is better)
Translates to: KLPSVNSCRQVTLRF*VPPPHVLEHCCHSS
Trigger: CGAAGAGTGGCAGCAGTGTTCCAGGACATGCGGTGGGGGAACTCAGAACCGGAGAGTCACCTGTCGACAGCTGTTAACTGATGGCAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp ATGCTTGTAAACCACCTTGCTGGGCAATCCCGGATGTTACAGGACTaGAACCCAGCCAGCGGCTTCCTGTGGGGACCACACAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: MLVNHLAGQSRMLQD*NPASGFLWGPHRAS
Trigger: TGAAGCCCTGTGTGGTCCCCACAGGAAGCCGCTGGCTGGGTTTCAGTCCTGTAACATCCGGGATTGCCCAGCAAGGTGGTTTACAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp TGTCCGCCACAATTTTGCAGCTCCCTGTGTGAATGCAGTCGACTTTaGGAGACTGGAAGCCCCTGCCACAGACTGCTGTACAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: CPPQFCSSLCECSRL*ETGSPCHRLLYRAS
Trigger: GGAAGCCCTGTACAGCAGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTGTGGCGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp GGGGCTGGGAATTCCTCAGGATGGAGGCAGTATACATCTCGTGTCTaGATTCCAACACCACAGGTAGCTGAACAGGCTCCCCAAGAGCCC +
Preference number: 5 (lower is better)
Translates to: GAGNSSGWRQYTSRV*IPTPQVAEQAPQEP
Trigger: GGGCTCTTGGGGAGCCTGTTCAGCTACCTGTGGTGTTGGAATCCAGACACGAGATGTATACTGCCTCCATCCTGAGGAATTCCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp AGTTTTGTCTTCGTTCCCAGTTTCGCTTTGCTGCATATAGGCATCTaGCATGGTCTCACGAGGGGGAGCCCTGGCAGGTCCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: SFVFVPSFALLHIGI*HGLTRGSPGRSLHS
Trigger: GCTGTGCAGGGACCTGCCAGGGCTCCCCCTCGTGAGACCATGCCAGATGCCTATATGCAGCAAAGCGAAACTGGGAACGAAGACAAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CTTCCTCACGGATGCCCCTCCACTGCACAGGCGTTGGCTGAGCCTTaGCCAACTCAGCTACCAGCTGATATATCATCTGGGATGCGAGAT +
Preference number: 5 (lower is better)
Translates to: LPHGCPSTAQALAEP*PTQLPADISSGMRD
Trigger: ATCTCGCATCCCAGATGATATATCAGCTGGTAGCTGAGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGAGGGGCATCCGTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp CTCAGGTGCAACTTCCTCACGGATGCCCCTCCACTGCACAGGCGTTaGCTGAGCCTTGGCCAACTCAGCTACCAGCTGATATATCATCTG +
Preference number: 5 (lower is better)
Translates to: LRCNFLTDAPPLHRR*LSLGQLSYQLIYHL
Trigger: CAGATGATATATCAGCTGGTAGCTGAGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGAGGGGCATCCGTGAGGAAGTTGCACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCCGGTCAGTGGGTGGCTaGGGGCCTTCACACTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRDTGKRASLALASQHSSRSVGG*GPSHSS
Trigger: GGAGGAGTGTGAAGGCCCCAAGCCACCCACTGACCG...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp GCTTCATCTGTGGGTTGCAGCCTCCAACATGTTGCCCACGATGGTTaGTACACAGAACCACTCGGTAGCGCAACCCTCGGCCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: ASSVGCSLQHVAHDG*YTEPLGSATLGHKS
Trigger: TGACTTGTGGCCGAGGGTTGCGCTACCGAGTGGTTCTGTGTATCAACCATCGTGGGCAACATGTTGGAGGCTGCAACCCACAGATGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp ACTGAGACCACTCCATGGCAACCCACTTGGGGCAATCAAAGAGGTTaGAAGCCTGCATCACCGTGGGCTTGGGTGCATACATGCACTTCC +
Preference number: 5 (lower is better)
Translates to: TETTPWQPTWGNQRG*KPASPWAWVHTCTS
Trigger: GGAAGTGCATGTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCAAGTGGGTTGCCATGGAGTGGTCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp GAGTCGGTTGTCAGTCCCAATGAGCTTGAGAACGACCGTCTCCTGTaGAGAGCCTGCGATGCATCTGTATACACCAATGTCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ESVVSPNELENDRLL*RACDASVYTNVRGS
Trigger: GCTGCCCCTGACATTGGTGTATACAGATGCATCGCAGGCTCTGCACAGGAGACGGTCGTTCTCAAGCTCATTGGGACTGACAACCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GCCGGAACCCCAAGGGACCACAAGTGGCAGAACAGTGTGTCCAGTTaGCAGGTTCCCAAAAGTGCTCTTGAGGCAGGGACTTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: AGTPRDHKWQNSVSS*QVPKSALEAGTFLL
Trigger: TAACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGAACCTGGCAACTGGACACACTGTTCTGCCACTTGTGGTCCCTTGGGGTTCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp CCTAGAGGCCTGTCTTTAGGAGCACATGCCCTTGGGGACACCACCTaGACAGTCCCATTGGCTTTTGTCTGCTTGCATGTCACTTGCCGA +
Preference number: 5 (lower is better)
Translates to: PRGLSLGAHALGDTT*TVPLAFVCLHVTCR
Trigger: TCGGCAAGTGACATGCAAGCAGACAAAAGCCAATGGGACTGTGCAGGTGGTGTCCCCAAGGGCATGTGCTCCTAAAGACAGGCCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GCACACAGTATCTGTCCGCCACAATTTTGCAGCTCCCTGTGTGAATaGAGTCGACTTTGCGAGACTGGAAGCCCCTGCCACAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: AHSICPPQFCSSLCE*SRLCETGSPCHRLL
Trigger: CAGCAGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTGTGGCGGACAGATACTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACTCCACTGCACAGGCGTaGGCTGAGCCTTGGCCAACT +
Preference number: 5 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHSTAQA*AEPWPT
Trigger: AGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGA...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp TGGGTGCCAGCTCTACCACCAAACTCTGTCCCCGAGCGTGACACTTaGGTGCACATGGGGCAGCAGGGTCATTGTATAGTGGAATCCATT +
Preference number: 5 (lower is better)
Translates to: WVPALPPNSVPERDT*VHMGQQGHCIVESI
Trigger: AATGGATTCCACTATACAATGACCCTGCTGCCCCATGTGCACTCAAGTGTCACGCTCGGGGACAGAGTTTGGTGGTAGAGCTGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp AACACTTTGGGTGCCAGCTCTACCACCAAACTCTGTCCCCGAGCGTaGCACTTGAGTGCACATGGGGCAGCAGGGTCATTGTATAGTGGA +
Preference number: 5 (lower is better)
Translates to: NTLGASSTTKLCPRA*HLSAHGAAGSLYSG
Trigger: TCCACTATACAATGACCCTGCTGCCCCATGTGCACTCAAGTGTCACGCTCGGGGACAGAGTTTGGTGGTAGAGCTGGCACCCAAAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CCCATGCAACGTCCAGGACACTGGTTTCCTGGGTCGATGGCCTGTTaGACACATGGACGAATGGAACATGGTTTTCTCCCTAGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: PMQRPGHWFPGSMAC*THGRMEHGFLPRGL
Trigger: CAGGCCTCTAGGGAGAAAACCATGTTCCATTCGTCCATGTGTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 90 bp ACCTGCACACAGTATCTGTCCGCCACAATTTTGCAGCTCCCTGTGTaGATGCAGTCGACTTTGCGAGACTGGAAGCCCCTGCCACAGACT +
Preference number: 5 (lower is better)
Translates to: TCTQYLSATILQLPV*MQSTLRDWKPLPQT
Trigger: AGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTGTGGCGGACAGATACTGTGTGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp CACAGGTCCGGGAGCAGTCACTCCAGTCTCCCCAGGCGTCCCAGTTaGCATCCTTGTCTTCTTCTGAATGAGCATTTCTTGAAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: HRSGSSHSSLPRRPS*HPCLLLNEHFLKSG
Trigger: ACCAGACTTCAAGAAATGCTCATTCAGAAGAAGACAAGGATGGCAACTGGGACGCCTGGGGAGACTGGAGTGACTGCTCCCGGACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp ATCCAGAGAGTCAGCATTGCAGCGAGTTCCATCCAACACTTTGGGTaGCAGCTCTACCACCAAACTCTGTCCCCGAGCGTGACACTTGAG +
Preference number: 5 (lower is better)
Translates to: IQRVSIAASSIQHFG*QLYHQTLSPSVTLE
Trigger: CTCAAGTGTCACGCTCGGGGACAGAGTTTGGTGGTAGAGCTGGCACCCAAAGTGTTGGATGGAACTCGCTGCAATGCTGACTCTCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp AATCAAACTGATTGCACGCTCGTAAGGCATGCGGCTTTTCCTCTCTaGATTCCTCCGGAGGGGCTGGGAATTCCTCAGGATGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: NQTDCTLVRHAAFPL*IPPEGLGIPQDGGS
Trigger: ACTGCCTCCATCCTGAGGAATTCCCAGCCCCTCCGGAGGAATGCAGAGAGGAAAAGCCGCATGCCTTACGAGCGTGCAATCAGTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CATCCTCGTGGCATGGCCCATGCAACGTCCAGGACACTGGTTTCCTaGGTCGATGGCCTGTTGAACACATGGACGAATGGAACATGGTTT +
Preference number: 5 (lower is better)
Translates to: HPRGMAHATSRTLVS*VDGLLNTWTNGTWF
Trigger: AAACCATGTTCCATTCGTCCATGTGTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp GCAGTTTCTATCACAGGAAGGCCCGAGACAGTGCCTCCAGGCAGCTaGTTTCACCTGCACACAGTATCTGTCCGCCACAATTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: AVSITGRPETVPPGS*FHLHTVSVRHNFAA
Trigger: AGCTGCAAAATTGTGGCGGACAGATACTGTGTGCAGGTGAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTCCTGTGATAGAAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp GTACGTACTATCACAGGAAGGCCCGAGACAGTGCCTCCAGGCAGCTaGTTTCACCTGCACACAGTATCTGTCCGCCACAATTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: VRTITGRPETVPPGS*FHLHTVSVRHNFAA
Trigger: AGCTGCAAAATTGTGGCGGACAGATACTGTGTGCAGGTGAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTCCTGTGATAGTACGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACCGATGCCTTGGGTCCTaGGCACAGCTCATCCGACAA +
Preference number: 5 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHRCLGS*AQLIRQ
Trigger: TTGTCGGATGAGCTGTGCCAAGGACCCAAGGCATCG...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp ATGTCACGGTGCAGGGAAAGAAGTCAGTCTGTCTCCACTGATGGCTaGTGGGCTGGTAAAAGAAGAACTGGACCACGCTGCCTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: MSRCRERSQSVSTDG*WAGKRRTGPRCLWP
Trigger: TGGCCAAAGGCAGCGTGGTCCAGTTCTTCTTTTACCAGCCCATCAGCCATCAGTGGAGACAGACTGACTTCTTTCCCTGCACCGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp AGCGTCTCAGCTACGGAGACTCTTCGGCCTTTGGCAGTCAGTTTTTaGCACACCTGCTTTCTTCTCTGGAATCCAACCCCGCAGGTGACA +
Preference number: 5 (lower is better)
Translates to: SVSATETLRPLAVSF*HTCFLLWNPTPQVT
Trigger: TGTCACCTGCGGGGTTGGATTCCAGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGCTGAGACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CACTTGCCGACTGTGAAATCCTTCACCACAAGACGCGGAGCACTCTaGCCACATGCTTGTAAACCACCTTGCTGGGCAATCCCGGATGTT +
Preference number: 5 (lower is better)
Translates to: HLPTVKSFTTRRGAL*PHACKPPCWAIPDV
Trigger: AACATCCGGGATTGCCCAGCAAGGTGGTTTACAAGCATGTGGTCAGAGTGCTCCGCGTCTTGTGGTGAAGGATTTCACAGTCGGCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp AGGCAGCTGGTTTCACCTGCACACAGTATCTGTCCGCCACAATTTTaGAGCTCCCTGTGTGAATGCAGTCGACTTTGCGAGACTGGAAGC +
Preference number: 5 (lower is better)
Translates to: RQLVSPAHSICPPQF*SSLCECSRLCETGS
Trigger: GCTTCCAGTCTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTGTGGCGGACAGATACTGTGTGCAGGTGAAACCAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp ACATATCCAGAGAGTCAGCATTGCAGCGAGTTCCATCCAACACTTTaGGTGCCAGCTCTACCACCAAACTCTGTCCCCGAGCGTGACACT +
Preference number: 5 (lower is better)
Translates to: TYPESQHCSEFHPTL*VPALPPNSVPERDT
Trigger: AGTGTCACGCTCGGGGACAGAGTTTGGTGGTAGAGCTGGCACCCAAAGTGTTGGATGGAACTCGCTGCAATGCTGACTCTCTGGATATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CGGGATGGGGATGACACACTCCTCTTTGATGTGCAGCTTCATCTGTaGGTTGCAGCCTCCAACATGTTGCCCACGATGGTTGATACACAG +
Preference number: 5 (lower is better)
Translates to: RDGDDTLLFDVQLHL*VAASNMLPTMVDTQ
Trigger: CTGTGTATCAACCATCGTGGGCAACATGTTGGAGGCTGCAACCCACAGATGAAGCTGCACATCAAAGAGGAGTGTGTCATCCCCATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp GCAGGTCCCTGCACAGCGTCTCAGCTACGGAGACTCTTCGGCCTTTaGCAGTCAGTTTTTGACACACCTGCTTTCTTCTCTGGAATCCAA +
Preference number: 5 (lower is better)
Translates to: AGPCTASQLRRLFGL*QSVFDTPAFFSGIQ
Trigger: TTGGATTCCAGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGCTGAGACGCTGTGCAGGGACCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp TGGCATGGCCCATGCAACGTCCAGGACACTGGTTTCCTGGGTCGATaGCCTGTTGAACACATGGACGAATGGAACATGGTTTTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: WHGPCNVQDTGFLGR*PVEHMDEWNMVFSL
Trigger: TAGGGAGAAAACCATGTTCCATTCGTCCATGTGTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTCCAGAGAGTCAGCATaGCAGCGAGTTCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: GREAQQASLQTNPKPQCASRESA*QRVPSN
Trigger: GTTGGATGGAACTCGCTGCAATGCTGACTCTCTGGA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCTCAGTCCCAATGAGCTaGAGAACGACCGTCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GREAQQASLQTNPKPQCASVPMS*RTTVSC
Trigger: ACAGGAGACGGTCGTTCTCAAGCTCATTGGGACTGA...GGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp GAGCACTGCTGGGCTCTGAAGTCTTCTGCATCTGCTGGGCAGTCGTaGTTGCTGCAAGTCTTGTATCTGATGTTCTGTCCTTCGCAGTTC +
Preference number: 5 (lower is better)
Translates to: EHCWALKSSASAGQS*LLQVLYLMFCPSQF
Trigger: GAACTGCGAAGGACAGAACATCAGATACAAGACTTGCAGCAATCACGACTGCCCAGCAGATGCAGAAGACTTCAGAGCCCAGCAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CCGACAAATTCAAAAAGCTGCCATCAGTTAACAGCTGTCGACAGGTaGCTCTCCGGTTCTGAGTTCCCCCACCGCATGTCCTGGAACACT +
Preference number: 5 (lower is better)
Translates to: PTNSKSCHQLTAVDR*LSGSEFPHRMSWNT
Trigger: AGTGTTCCAGGACATGCGGTGGGGGAACTCAGAACCGGAGAGTCACCTGTCGACAGCTGTTAACTGATGGCAGCTTTTTGAATTTGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp GCAAGCGGAGCCCAGAGGTTGCCACTGCTTTCCCAAGAGCATTGGTaGCTGTGCAAATGTAGGTTCCTTCATTTTCGAGTGAAGCACTCT +
Preference number: 5 (lower is better)
Translates to: ASGAQRLPLLSQEHW*LCKCRFLHFRVKHS
Trigger: AGAGTGCTTCACTCGAAAATGAAGGAACCTACATTTGCACAGCCACCAATGCTCTTGGGAAAGCAGTGGCAACCTCTGGGCTCCGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACTGTGCGATGAGTCGGTaGTCAGTCCCAATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHCAMSR*SVPMSL
Trigger: CAAGCTCATTGGGACTGACAACCGACTCATCGCACA...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGTCAGAGCTGGAGCTGTaGTGGGAACAAGCAGTGTGG +
Preference number: 5 (lower is better)
Translates to: ALVLALMYLPFSPNRILVSELEL*WEQAVW
Trigger: CCACACTGCTTGTTCCCACAACAGCTCCAGCTCTGA...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CTTCTGCATCTGCTGGGCAGTCGTGATTGCTGCAAGTCTTGTATCTaGTGTTCTGTCCTTCGCAGTTCCTTCCAGTCAGACATCTCCGCA +
Preference number: 5 (lower is better)
Translates to: LLHLLGSRDCCKSCI*CSVLRSSFQSDISA
Trigger: TGCGGAGATGTCTGACTGGAAGGAACTGCGAAGGACAGAACATCAGATACAAGACTTGCAGCAATCACGACTGCCCAGCAGATGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp ACAGTCCCATTGGCTTTTGTCTGCTTGCATGTCACTTGCCGACTGTaGAATCCTTCACCACAAGACGCGGAGCACTCTGACCACATGCTT +
Preference number: 5 (lower is better)
Translates to: TVPLAFVCLHVTCRL*NPSPQDAEHSDHML
Trigger: AAGCATGTGGTCAGAGTGCTCCGCGTCTTGTGGTGAAGGATTTCACAGTCGGCAAGTGACATGCAAGCAGACAAAAGCCAATGGGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp AGAGAGCGCAAACTCAGGAAGGAAGTAGGCTCCAGGAGACTTCTCTaGTGTAGCCTGCAGAAGACCAGAGACCGTAAAGATCATTCGTGT +
Preference number: 5 (lower is better)
Translates to: RERKLRKEVGSRRLL*CSLQKTRDRKDHSC
Trigger: ACACGAATGATCTTTACGGTCTCTGGTCTTCTGCAGGCTACAGCAGAGAAGTCTCCTGGAGCCTACTTCCTTCCTGAGTTTGCGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp ATTAGGCTGAGGGACACCTTTTACAGGACAGTGGATTGTCACATTTaGTTGAAGGGCTGCCTCCACAGTGCCTCCCACAACAACAGACAG +
Preference number: 5 (lower is better)
Translates to: IRLRDTFYRTVDCHI*LKGCLHSASHNNRQ
Trigger: CTGTCTGTTGTTGTGGGAGGCACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACTGTCCTGTAAAAGGTGTCCCTCAGCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GGAGCCCAGAGGTTGCCACTGCTTTCCCAAGAGCATTGGTGGCTGTaGAAATGTAGGTTCCTTCATTTTCGAGTGAAGCACTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: GAQRLPLLSQEHWWL*KCRFLHFRVKHSAT
Trigger: TGTTGCAGAGTGCTTCACTCGAAAATGAAGGAACCTACATTTGCACAGCCACCAATGCTCTTGGGAAAGCAGTGGCAACCTCTGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp GAACCTGACTTGGTGATGCCAAGCTGCTTAGAGTTCTTCAGACAATaGCCATCCTTCTCCCACTGGATTAGAGACTTCTGGAAGCGTCGC +
Preference number: 5 (lower is better)
Translates to: EPDLVMPSCLEFFRQ*PSFSHWIRDFWKRR
Trigger: GCGACGCTTCCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAAGTCAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGGTTCCATCCAACACTTaGGGTGCCAGCTCTACCACC +
Preference number: 5 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQVPSNT*GASSTT
Trigger: GGTGGTAGAGCTGGCACCCAAAGTGTTGGATGGAAC...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAGTGGCTCCCAAACTATaGGCTTCATTATGGTCCACC +
Preference number: 5 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGVAPKL*ASLWST
Trigger: GGTGGACCATAATGAAGCCAATAGTTTGGGAGCCAC...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp AATCCATTCATAATAATGACCCTGGTACTGCACGTCATTGTAGGCTaGGCACTGCTGGGCTCTGAAGTCTTCTGCATCTGCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: NPFIIMTLVLHVIVG*ALLGSEVFCICWAV
Trigger: GACTGCCCAGCAGATGCAGAAGACTTCAGAGCCCAGCAGTGCTCAGCCTACAATGACGTGCAGTACCAGGGTCATTATTATGAATGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp TGGCATTACTTCCCAGCTGTCTATCACAGCCCACAATCTGGCAGATaGCACTTATGCACATATCCAGAGAGTCAGCATTGCAGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: WHYFPAVYHSPQSGR*HLCTYPESQHCSEF
Trigger: GAACTCGCTGCAATGCTGACTCTCTGGATATGTGCATAAGTGGCATCTGCCAGATTGTGGGCTGTGATAGACAGCTGGGAAGTAATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp ACTTGGGGCAATCAAAGAGGTTGCAAGCCTGCATCACCGTGGGCTTaGGTGCATACATGCACTTCCATTCTTCCACTTGTAGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: TWGNQRGCKPASPWA*VHTCTSILPLVESL
Trigger: CAGAGATTCTACAAGTGGAAGAATGGAAGTGCATGTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CCAAGCTGCTTAGAGTTCTTCAGACAATGGCCATCCTTCTCCCACTaGATTAGAGACTTCTGGAAGCGTCGCACTGGGCATTTGATGATC +
Preference number: 5 (lower is better)
Translates to: PSCLEFFRQWPSFSH*IRDFWKRRTGHLMI
Trigger: GATCATCAAATGCCCAGTGCGACGCTTCCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CCTGCGATGCATCTGTATACACCAATGTCAGGGGCAGCAAGGCTATaGATTTTCAGTGAACCTGACTTGGTGATGCCAAGCTGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: PAMHLYTPMSGAARL*IFSEPDLVMPSCLE
Trigger: CTCTAAGCAGCTTGGCATCACCAAGTCAGGTTCACTGAAAATCCATAGCCTTGCTGCCCCTGACATTGGTGTATACAGATGCATCGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp ATCTGGGATGCGAGATCGTCGCTGGCCTCTCCCATCTCCATAAGCTaGCTCATGTTTCTTATAAGCTCATCAAATTGGGCTGTGTCCATG +
Preference number: 5 (lower is better)
Translates to: IWDARSSLASPISIS*LMFLISSSNWAVSM
Trigger: CATGGACACAGCCCAATTTGATGAGCTTATAAGAAACATGAGCCAGCTTATGGAGATGGGAGAGGCCAGCGACGATCTCGCATCCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp GACTTTCCTGTTAAGTTGTTGCTGTTTATTCTGCTTCTGGGTGCCTaGAGAACTCGCGTTTTCTGGACCTTAGGGAACGCAGCCTTACCG +
Preference number: 5 (lower is better)
Translates to: DFPVKLLLFILLLGA*RTRVFWTLGNAALP
Trigger: CGGTAAGGCTGCGTTCCCTAAGGTCCAGAAAACGCGAGTTCTCCAGGCACCCAGAAGCAGAATAAACAGCAACAACTTAACAGGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCTGCATCACCGTGGGCTaGGGTGCATACATGCACTTC +
Preference number: 5 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPCITVG*GAYMHF
Trigger: GAAGTGCATGTATGCACCCAAGCCCACGGTGATGCA...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTATGACACACTCCTCTTaGATGTGCAGCTTCATCTGT +
Preference number: 5 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSMTHSS*MCSFIC
Trigger: ACAGATGAAGCTGCACATCAAAGAGGAGTGTGTCAT...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AAACCCTCCACCTACAGTAGTGTTCATCCCAGTGTCGGTGAGGCTGAAGTTGGAGCTGCTTCAAACTGCTaGTTCTTAAACTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: KPSTYSSVHPSVGEAEVGAASNC*FLNSQE
Trigger: CTCCTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGC...TCCAACTTCAGCCTCACCGACACTGGGATGAACACTACTGTAGGTGGAGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CTATGTGTGCAAGCAGCCGGGACACCGAGTAAAGAAACAGGACCACTTATTTGGAGTGGATTGTCACATTaGCTTGAAGGGCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LCVQAAGTPSKETGPLIWSGLSH*LEGLPP
Trigger: TGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACT...CCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCACACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp CTTCTGAATGAGCATTTCTTGAAGTCTGGTCATCATAGCGGTATGTaGGGAACTGCTCCCCTGTGGTGTCTTCTAGGAAGCTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LLNEHFLKSGHHSGM*GTAPLWCLLGSFPE
Trigger: CTCAGGGAAGCTTCCTAGAAGACACCACAGGGGAGCAGTTCCTCACATACCGCTATGATGACCAGACTTCAAGAAATGCTCATTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp GACACCTTTTACAGGACAGTGGATTGTCACATTTGCTTGAAGGGCTaGCTCCACAGTGCCTCCCACAACAACAGACAGATGATTGTGTTC +
Preference number: 5 (lower is better)
Translates to: DTFYRTVDCHICLKG*LHSASHNNRQMIVF
Trigger: GAACACAATCATCTGTCTGTTGTTGTGGGAGGCACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACTGTCCTGTAAAAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp TGGCCATCCTTCTCCCACTGGATTAGAGACTTCCATTCTATTACCTaGAGAAGACCAGAGACCGTAAAGATCATTCGTGTCAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: WPSFSHWIRDFHSIT*RRPETVKIIRVSSH
Trigger: GTGGCTGCTGACACGAATGATCTTTACGGTCTCTGGTCTTCTGCAGGTAATAGAATGGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp AGGTCCCGAGAGCAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATCTCACTGTCCTTCTCTaGGAGACGGCCACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RSREQHIAVDAFVLVLNYLTVLL*ETATQF
Trigger: GAACTGGGTGGCCGTCTCCAAGAGAAGGACAGTGAG...ATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTGCTCTCGGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GATGCTTTAAGAGTGAAGACAATGTTATCTGTGGAGAATCCTTGGCTCGGTTGGTACAGGCCTGACTCATaGGTGGAGGACGGTGAACTG +
Preference number: 5 (lower is better)
Translates to: DALRVKTMLSVENPWLGWYRPDS*VEDGEL
Trigger: CAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTA...CCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTTCACTCTTAAAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCCGTCGCACTGGGCATTaGATGATCACAGATGTATTG +
Preference number: 5 (lower is better)
Translates to: TRDTGKRASLALASQHSSRRTGH*MITDVL
Trigger: CAATACATCTGTGATCATCAAATGCCCAGTGCGACG...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GCCCTGGTCTTAGCCCTAATGTACCTTCCTTTCTCACCTAACCGAATCCTAGTGGGCTTAAAAGTCAGCTaGCCTGAGTTTTTCACGGTG +
Preference number: 5 (lower is better)
Translates to: ALVLALMYLPFSPNRILVGLKVS*PEFFTV
Trigger: CACCGTGAAAAACTCAGGCAAGCTGACTTTTAAGCC...CACTAGGATTCGGTTAGGTGAGAAAGGAAGGTACATTAGGGCTAAGACCAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGACCTGCACAGTCCCATaGGCTTTTGTCTGCTTGCAT +
Preference number: 5 (lower is better)
Translates to: NQGYWEKSLFSFSFSAQQTCTVP*AFVCLH
Trigger: ATGCAAGCAGACAAAAGCCAATGGGACTGTGCAGGT...CTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTACATACAGTAGTGAGTaGTGTCCGTGCAGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSTYSSE*CPCSFY
Trigger: ATAGAAACTGCACGGACACAACTCACTACTGTATGT...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp ACCAGGGATACTGGGAAAAGAGCCTCTTTAGCTTTAGCTTCTCAGCACAGCAGCACATACAGTAGTGAGTaGTGTCCGTGCAGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TRDTGKRASLALASQHSSTYSSE*CPCSFL
Trigger: CAGGAAACTGCACGGACACAACTCACTACTGTATGT...GCTGCTGTGCTGAGAAGCTAAAGCTAAAGAGGCTCTTTTCCCAGTATCCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172784.2
CDS TCA 90 bp GTGGCAGAACAGTGTGTCCAGTTGCCAGGTTCCCAAAAGTGCTCTTaGGGCAGGGACTTTCCTGTTAAGTTGTTGCTGTTTATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: VAEQCVQLPGSQKCS*GRDFPVKLLLFILL
Trigger: AAGCAGAATAAACAGCAACAACTTAACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGAACCTGGCAACTGGACACACTGTTCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GCAAGGCTATGGATTTTCAGTGAACCTGACTTGGTGATGCCAAGCTaGTTAGAGTTCTTCAGACAATGGCCATCCTTCTCCCACTGGATT +
Preference number: 5 (lower is better)
Translates to: ARLWIFSEPDLVMPS*LEFFRQWPSFSHWI
Trigger: AATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAAGTCAGGTTCACTGAAAATCCATAGCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp GTTCCCAAAAGTGCTCTTGAGGCAGGGACTTTCCTGTTAAGTTGTTaGTGTTTATTCTGCTTCTGGGTGCCTGGAGAACTCGCGTTTTCT +
Preference number: 5 (lower is better)
Translates to: VPKSALEAGTFLLSC*CLFCFWVPGELAFS
Trigger: AGAAAACGCGAGTTCTCCAGGCACCCAGAAGCAGAATAAACAGCAACAACTTAACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp TTCTTCAGACAATGGCCATCCTTCTCCCACTGGATTAGAGACTTCTaGAAGCGTCGCACTGGGCATTTGATGATCACAGATGTATTGAGC +
Preference number: 5 (lower is better)
Translates to: FFRQWPSFSHWIRDF*KRRTGHLMITDVLS
Trigger: GCTCAATACATCTGTGATCATCAAATGCCCAGTGCGACGCTTCCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 90 bp CCAAGCTGCTTAGAGTTCTTCAGACAATGGCCATCCTTCTCCCACTaGATTAGAGACTTCCATTCTATTACCTGCAGAAGACCAGAGACC +
Preference number: 5 (lower is better)
Translates to: PSCLEFFRQWPSFSH*IRDFHSITCRRPET
Trigger: GGTCTCTGGTCTTCTGCAGGTAATAGAATGGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp GAGGCTCAGCAAGCCTCTCTACAAACAAACCCAAAGCCACAATGTGCCGTTCACCTGAATGAGCATTTCTaGAAGTCTGGTCATCATAGC +
Preference number: 5 (lower is better)
Translates to: EAQQASLQTNPKPQCAVHLNEHF*KSGHHS
Trigger: GCTATGATGACCAGACTTCAAGAAATGCTCATTCAG...GTGAACGGCACATTGTGGCTTTGGGTTTGTTTGTAGAGAGGCTTGCTGAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCGCACAGACGCCACAATaGTCCTCCTTGGCATTACTT +
Preference number: 5 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPAQTPQ*SSLALL
Trigger: AAGTAATGCCAAGGAGGACAATTGTGGCGTCTGTGC...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GATGCTTTAAGAGTGAAGACAATGTTATCTGTGGAGAATCCTTGGCTCGGTTGGTCCATGGCAACCCACTaGGGGCAATCAAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: DALRVKTMLSVENPWLGWSMATH*GQSKRL
Trigger: CAACCTCTTTGATTGCCCCAAGTGGGTTGCCATGGA...CCAACCGAGCCAAGGATTCTCCACAGATAACATTGTCTTCACTCTTAAAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp GCTGTGTCCATGCTGTATGCTCCCTGTTTCATGGCTGCTTCAAACTaGTTGTTCTTAAACTCCCAGGAGTTATCATTTCCTTCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: AVSMLYAPCFMAASN*LFLNSQELSFPSEV
Trigger: GACCTCTGAAGGAAATGATAACTCCTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCATGGACACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp GAACCTGACTTGGTGATGCCAAGCTGCTTAGAGTTCTTCAGACAATaGCCATCCTTCTCCCACTGGATTAGAGACTTCCATTCTATTACC +
Preference number: 5 (lower is better)
Translates to: EPDLVMPSCLEFFRQ*PSFSHWIRDFHSIT
Trigger: GGTAATAGAATGGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAAGTCAGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp ATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGAGACTTTCTGCCAACAGTCAGGTaGATCCTCTTCTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: IGYCFCINLHLIIVSRDFLPTVR*ILFSSL
Trigger: GAGGGAAGAGAAGAGGATCAACCTGACTGTTGGCAG...AAAGTCTCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp ACCTGTGCTCAGAAGATGGCAGAGAGGCTCAGCAAGCCTCTCTACAAACAAACCTGTAGGATTTCGTATTaGCATCTTCCCAGTTTCATC +
Preference number: 5 (lower is better)
Translates to: TCAQKMAERLSKPLYKQTCRISY*HLPSFI
Trigger: GATGAAACTGGGAAGATGCAAATACGAAATCCTACA...GGTTTGTTTGTAGAGAGGCTTGCTGAGCCTCTCTGCCATCTTCTGAGCACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CCCTGTCTGTTCCAGACCACCAAACCCTCCACCTACAGTAGTGTTCATCCCAGTTTTCCTGTTAAGTTGTaGCTGTTTATTCTGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PCLFQTTKPSTYSSVHPSFPVKL*LFILLL
Trigger: CAGAAGCAGAATAAACAGCAACAACTTAACAGGAAA...ACTGGGATGAACACTACTGTAGGTGGAGGGTTTGGTGGTCTGGAACAGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACAGCGGAGCCCAGAGGTaGCCACTGCTTTCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: HIAVDAFVLVLNYILYRNSGAQR*PLLSQE
Trigger: CTCTTGGGAAAGCAGTGGCAACCTCTGGGCTCCGCT...GTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp AAGAGCATTGGTGGCTGTGCAAATGTAGGTTCCTTCATTTTCGAGTaGAGCACTCTGCAACAACAGGGATCCATTGAAAAGCAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: KSIGGCANVGSFIFE*STLQQQGSIEKQGN
Trigger: GTTTCCTTGCTTTTCAATGGATCCCTGTTGTTGCAGAGTGCTTCACTCGAAAATGAAGGAACCTACATTTGCACAGCCACCAATGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 90 bp ATCAAATTGGGCTGTGTCCATGCTGTATGCTCCCTGTTTCATGGCTaGTTCAAACTGCTTGTTCTTAAACTCCCAGGAGTTATCATTTCC +
Preference number: 5 (lower is better)
Translates to: IKLGCVHAVCSLFHG*FKLLVLKLPGVIIS
Trigger: GGAAATGATAACTCCTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCATGGACACAGCCCAATTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 90 bp ATCCATACTGCATTCCTTCAGCTTTGGTTTAGGCTTCACATTTTCTaGGTAGTAATGGCAATAGTGGTCAGGCACTACCCTTTTCAAGCG +
Preference number: 5 (lower is better)
Translates to: IHTAFLQLWFRLHIF*VVMAIVVRHYPFQA
Trigger: CGCTTGAAAAGGGTAGTGCCTGACCACTATTGCCATTACTACCCAGAAAATGTGAAGCCTAAACCAAAGCTGAAGGAATGCAGTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp GGGGTTGTGCAGCATCTAAAGCTACAACTGGTAAAATATCATGGAAAGGTCCCCTTTGGCAGTCAGTTTTaGACACACCTGCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GVVQHLKLQLVKYHGKVPFGSQF*THLLSS
Trigger: AGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAA...GGGGACCTTTCCATGATATTTTACCAGTTGTAGCTTTAGATGCTGCACAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAGCAGCGCTCCATCCTaGGTCCATGTGTATGTGGCC +
Preference number: 5 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRSSAPS*VHVYVA
Trigger: GGCCACATACACATGGACCAAGGATGGAGCGCTGCT...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGATTCCCAAAAGTGCTCTaGAGGCAGGGACTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRFPKVL*RQGLSC
Trigger: ACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGAA...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 90 bp TTCCTTCATTTTCGAGTGAAGCACTCTGCAACAACAGGGATCCATTaGAAAGCAAGGAAACATTGTCACTCAGAGATCCTCCTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FLHFRVKHSATTGIH*KARKHCHSEILLSS
Trigger: TGAAGACAGGAGGATCTCTGAGTGACAATGTTTCCTTGCTTTTCAATGGATCCCTGTTGTTGCAGAGTGCTTCACTCGAAAATGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGGTGTATGTGGCCTCCTaGCTGGGAGTAATGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRVYVAS*LGVMRL
Trigger: CAGCCTCATTACTCCCAGCAAGGAGGCCACATACAC...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp AATTGTATCGGGTACTGTTTCTGCATTAACCTCCACTTGATCATCGTGTCTAGACAGTCCCATTGGCTTTaGTCTGCTTGCATGTCACTT +
Preference number: 5 (lower is better)
Translates to: NCIGYCFCINLHLIIVSRQSHWL*SACMSL
Trigger: AAGTGACATGCAAGCAGACAAAAGCCAATGGGACTG...TCTAGACACGATGATCAAGTGGAGGTTAATGCAGAAACAGTACCCGATACAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 90 bp CATGTTTCTTATAAGCTCATCAAATTGGGCTGTGTCCATGCTGTATaGTCCCTGTTTCATGGCTGCTTCAAACTGCTTGTTCTTAAACTC +
Preference number: 5 (lower is better)
Translates to: HVSYKLIKLGCVHAV*SLFHGCFKLLVLKL
Trigger: GAGTTTAAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCATGGACACAGCCCAATTTGATGAGCTTATAAGAAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS-3UTR CAA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGACGGTGTACCTGGTCTaGAAGATGAAATCAGCCATC +
Preference number: 5 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWTVYLV*KMKSAI
Trigger: GATGGCTGATTTCATCTTCAAGACCAGGTACACCGT...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp ATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGAACTGGTTCAGTGAACCTGACTaGGTGATGCCAAGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: IAVDAFVLVLNYILYRNWFSEPD*VMPSCL
Trigger: TAAGCAGCTTGGCATCACCAAGTCAGGTTCACTGAA...CCAGTTCCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS-3UTR CAA 90 bp CAACACATTGCTGTTGATGCATTTGTGTTAGTCCTAAACTATATCCTTTATAGGTATAAGCTCATCAAATaGGGCTGTGTCCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: QHIAVDAFVLVLNYILYRYKLIK*GCVHAV
Trigger: TACAGCATGGACACAGCCCAATTTGATGAGCTTATA...CCTATAAAGGATATAGTTTAGGACTAACACAAATGCATCAACAGCAATGTGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp AACGTGAGGAGCACCCGACACCGCACCTCACGAACCTaGATGCCAGGCCCGCACGTGGTGCTGCAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: NVRSTRHRTSRT*MPGPHVVLQAD
Trigger: GTCAGCCTGCAGCACCACGTGCGGGCCTGGCATTCAGGTTCGTGAGGTGCGGTGTCGGGTGCTCCTCACGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp GGCATGGTCTCACGAGGGGGAGCCCTGGCAGGTCCCTaGACAGCGTCTCAGCTACGGAGACTCTTCGGCCTT +
Preference number: 6 (lower is better)
Translates to: GMVSRGGALAGP*TASQLRRLFGL
Trigger: AAGGCCGAAGAGTCTCCGTAGCTGAGACGCTGTGCAGGGACCTGCCAGGGCTCCCCCTCGTGAGACCATGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp TATAGGCATCTGGCATGGTCTCACGAGGGGGAGCCCTaGCAGGTCCCTGCACAGCGTCTCAGCTACGGAGAC +
Preference number: 6 (lower is better)
Translates to: YRHLAWSHEGEP*QVPAQRLSYGD
Trigger: GTCTCCGTAGCTGAGACGCTGTGCAGGGACCTGCCAGGGCTCCCCCTCGTGAGACCATGCCAGATGCCTATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp CAGTGTGGTGGTGCTGCATCCTCGTGGCATGGCCCATaGAACGTCCAGGACACTGGTTTCCTGGGTCGATGG +
Preference number: 6 (lower is better)
Translates to: QCGGAASSWHGP*NVQDTGFLGRW
Trigger: CCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp GGGCGGGCAGGGCTCCATGTTACAGGCCTGACTCATTaGTGGAGGACGGTGAACTGTGTCACACAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GRAGLHVTGLTH*WRTVNCVTQAV
Trigger: GACAGCCTGTGTGACACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGAGCCCTGCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp GACAGAGCACTTCGACCAGTCTCCGGCAGCCAGCTGTaGGGGGCAGTCTGTCCTGGCACAGGACTTATGAGA +
Preference number: 6 (lower is better)
Translates to: DRALRPVSGSQL*GAVCPGTGLMR
Trigger: TCTCATAAGTCCTGTGCCAGGACAGACTGCCCCCCACAGCTGGCTGCCGGAGACTGGTCGAAGTGCTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp CCCAAACTATTGGCTTCATTATGGTCCACCCCAGGGTaGCCCCTCACGTGCTCTCGTAGGGACGGGTGTGCG +
Preference number: 6 (lower is better)
Translates to: PKLLASLWSTPG*PLTCSRRDGCA
Trigger: CGCACACCCGTCCCTACGAGAGCACGTGAGGGGTCACCCTGGGGTGGACCATAATGAAGCCAATAGTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp AACCACCTTGCTGGGCAATCCCGGATGTTACAGGACTaGAACCCAGCCAGCGGCTTCCTGTGGGGACCACAC +
Preference number: 6 (lower is better)
Translates to: NHLAGQSRMLQD*NPASGFLWGPH
Trigger: GTGTGGTCCCCACAGGAAGCCGCTGGCTGGGTTTCAGTCCTGTAACATCCGGGATTGCCCAGCAAGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp CTGGAGCTGTTGTGGGAACAAGCAGTGTGGTGGTGCTaGATCCTCGTGGCATGGCCCATGCAACGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: LELLWEQAVWWC*ILVAWPMQRPG
Trigger: TCCTGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp GAGCTGGAGCTGTTGTGGGAACAAGCAGTGTGGTGGTaGTGCATCCTCGTGGCATGGCCCATGCAACGTCCA +
Preference number: 6 (lower is better)
Translates to: ELELLWEQAVWW*CILVAWPMQRP
Trigger: TGGACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAGCTCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp TGGGCGGGCAGGGCTCCATGTTACAGGCCTGACTCATaGGTGGAGGACGGTGAACTGTGTCACACAGGCTGT +
Preference number: 6 (lower is better)
Translates to: WAGRAPCYRPDS*VEDGELCHTGC
Trigger: ACAGCCTGTGTGACACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGAGCCCTGCCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 90 bp CCAAAGGCAGGTCTCCTTCCGTCCTCACAGTCAGAGCTGGAGCTGTaGTGGGAACAAGCAGTGTGGTGGTGCTGCATCCTCGTGGCATGG +
Preference number: 6 (lower is better)
Translates to: PKAGLLPSSQSELEL*WEQAVWWCCILVAW
Trigger: CCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAGCTCCAGCTCTGACTGTGAGGACGGAAGGAGACCTGCCTTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp AACCTGAATGCCAGGCCCGCACGTGGTGCTGCAGGCTaGCCAGGGCTCTGGGATGAACTTTGGTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: NLNARPARGAAG*PGLWDELWFFC
Trigger: ACAGAAGAACCAAAGTTCATCCCAGAGCCCTGGTCAGCCTGCAGCACCACGTGCGGGCCTGGCATTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp ACACCTGCTTTCTTCTCTGGAATCCAACCCCGCAGGTaGCAGAGCACTTCGACCAGTCTCCGGCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: TPAFFSGIQPRR*QSTSTSLRQPA
Trigger: AGCTGGCTGCCGGAGACTGGTCGAAGTGCTCTGTCACCTGCGGGGTTGGATTCCAGAGAAGAAAGCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp TGCTGTACAGGGCTTCCAGGGGCCCACACGCCAACATaGTTCACATGGCCCCAAGGTGCAGTTCCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: CCTGLPGAHTPT*FTWPQGAVPSK
Trigger: TTTGGAAGGAACTGCACCTTGGGGCCATGTGAAGCATGTTGGCGTGTGGGCCCCTGGAAGCCCTGTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TTCGTTCCCAGTTTCGCTTTGCTGCATATAGGCATCTaGCATGGTCTCACGAGGGGGAGCCCTGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: FVPSFALLHIGI*HGLTRGSPGRS
Trigger: GGACCTGCCAGGGCTCCCCCTCGTGAGACCATGCCAGATGCCTATATGCAGCAAAGCGAAACTGGGAACGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp GGATGCCCCTCCACTGCACAGGCGTTGGCTGAGCCTTaGCCAACTCAGCTACCAGCTGATATATCATCTGGG +
Preference number: 6 (lower is better)
Translates to: GCPSTAQALAEP*PTQLPADISSG
Trigger: CCCAGATGATATATCAGCTGGTAGCTGAGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGAGGGGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp AACTTCCTCACGGATGCCCCTCCACTGCACAGGCGTTaGCTGAGCCTTGGCCAACTCAGCTACCAGCTGATA +
Preference number: 6 (lower is better)
Translates to: NFLTDAPPLHRR*LSLGQLSYQLI
Trigger: TATCAGCTGGTAGCTGAGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGAGGGGCATCCGTGAGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp CGTTTTCTGGACCTTAGGGAACGCAGCCTTACCGCCTaGTTCTCTTCGTTCCAGCAAGCGGAGCCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: RFLDLRERSLTA*FSSFQQAEPRG
Trigger: ACCTCTGGGCTCCGCTTGCTGGAACGAAGAGAACCAGGCGGTAAGGCTGCGTTCCCTAAGGTCCAGAAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TCAGAGCTGGAGCTGTTGTGGGAACAAGCAGTGTGGTaGTGCTGCATCCTCGTGGCATGGCCCATGCAACGT +
Preference number: 6 (lower is better)
Translates to: SELELLWEQAVW*CCILVAWPMQR
Trigger: ACGTTGCATGGGCCATGCCACGAGGATGCAGCACCACCACACTGCTTGTTCCCACAACAGCTCCAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp ACGTGCTCTCGTAGGGACGGGTGTGCGATGAGTCGGTaGTCAGTCCCAATGAGCTTGAGAACGACCGTCTCC +
Preference number: 6 (lower is better)
Translates to: TCSRRDGCAMSR*SVPMSLRTTVS
Trigger: GGAGACGGTCGTTCTCAAGCTCATTGGGACTGACAACCGACTCATCGCACACCCGTCCCTACGAGAGCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp CGTAGGGACGGGTGTGCGATGAGTCGGTTGTCAGTCCCAATGAGCTaGAGAACGACCGTCTCCTGTGCAGAGCCTGCGATGCATCTGTAT +
Preference number: 6 (lower is better)
Translates to: RRDGCAMSRLSVPMS*RTTVSCAEPAMHLY
Trigger: ATACAGATGCATCGCAGGCTCTGCACAGGAGACGGTCGTTCTCAAGCTCATTGGGACTGACAACCGACTCATCGCACACCCGTCCCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp CCTCAGGTGCAACTTCCTCACGGATGCCCCTCCACTGCACAGGCGTaGGCTGAGCCTTGGCCAACTCAGCTACCAGCTGATATATCATCT +
Preference number: 6 (lower is better)
Translates to: PQVQLPHGCPSTAQA*AEPWPTQLPADISS
Trigger: AGATGATATATCAGCTGGTAGCTGAGTTGGCCAAGGCTCAGCCAACGCCTGTGCAGTGGAGGGGCATCCGTGAGGAAGTTGCACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp CCTTACCGCCTGGTTCTCTTCGTTCCAGCAAGCGGAGCCCAGAGGTaGCCACTGCTTTCCCAAGAGCATTGGTGGCTGTGCAAATGTAGG +
Preference number: 6 (lower is better)
Translates to: PYRLVLFVPASGAQR*PLLSQEHWWLCKCR
Trigger: CCTACATTTGCACAGCCACCAATGCTCTTGGGAAAGCAGTGGCAACCTCTGGGCTCCGCTTGCTGGAACGAAGAGAACCAGGCGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp TCAGTTAACAGCTGTCGACAGGTGACTCTCCGGTTCTaGGTTCCCCCACCGCATGTCCTGGAACACTGCTGC +
Preference number: 6 (lower is better)
Translates to: SVNSCRQVTLRF*VPPPHVLEHCC
Trigger: GCAGCAGTGTTCCAGGACATGCGGTGGGGGAACTCAGAACCGGAGAGTCACCTGTCGACAGCTGTTAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp GAGGGGTACGTACTATCACAGGAAGGCCCGAGACAGTaGCTCCAGGCAGCTGGTTTCACCTGCACACAGTAT +
Preference number: 6 (lower is better)
Translates to: EGYVLSQEGPRQ*LQAAGFTCTQY
Trigger: ATACTGTGTGCAGGTGAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTCCTGTGATAGTACGTACCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172784.2
ENSMUST00000173828.3
CDS CCA 72 bp CGGGCAGGGCTCCATGTTACAGGCCTGACTCATTGGTaGAGGACGGTGAACTGTGTCACACAGGCTGTCATT +
Preference number: 6 (lower is better)
Translates to: RAGLHVTGLTHW*RTVNCVTQAVI
Trigger: AATGACAGCCTGTGTGACACAGTTCACCGTCCTCCACCAATGAGTCAGGCCTGTAACATGGAGCCCTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp GGCATGGCCCATGCAACGTCCAGGACACTGGTTTCCTaGGTCGATGGCCTGTTGAACACATGGACGAATGGA +
Preference number: 6 (lower is better)
Translates to: GMAHATSRTLVS*VDGLLNTWTNG
Trigger: TCCATTCGTCCATGTGTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGGGCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp CACTCCATGGCAACCCACTTGGGGCAATCAAAGAGGTaGCAAGCCTGCATCACCGTGGGCTTGGGTGCATAC +
Preference number: 6 (lower is better)
Translates to: HSMATHLGQSKR*QACITVGLGAY
Trigger: GTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCAAGTGGGTTGCCATGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 90 bp AAAGCCAGCGTACTCCCAGTCGTAAGTCATCTCACTGTCCTTCTCTaGGAGACGGCCACCCAGTTCTCGAGACACAGGGCTCTGGTCACA +
Preference number: 6 (lower is better)
Translates to: KASVLPVVSHLTVLL*ETATQFSRHRALVT
Trigger: TGTGACCAGAGCCCTGTGTCTCGAGAACTGGGTGGCCGTCTCCAAGAGAAGGACAGTGAGATGACTTACGACTGGGAGTACGCTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp GCTCTACCACCAAACTCTGTCCCCGAGCGTGACACTTaGGTGCACATGGGGCAGCAGGGTCATTGTATAGTG +
Preference number: 6 (lower is better)
Translates to: ALPPNSVPERDT*VHMGQQGHCIV
Trigger: CACTATACAATGACCCTGCTGCCCCATGTGCACTCAAGTGTCACGCTCGGGGACAGAGTTTGGTGGTAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp CGCACGTGGTGCTGCAGGCTGACCAGGGCTCTGGGATaGACTTTGGTTCTTCTGTGGCTATTCTGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: RTWCCRLTRALG*TLVLLWLFWSL
Trigger: AAGAGACCAGAATAGCCACAGAAGAACCAAAGTTCATCCCAGAGCCCTGGTCAGCCTGCAGCACCACGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp TACATCTCGTGTCTGGATTCCAACACCACAGGTAGCTaGACAGGCTCCCCAAGAGCCCATGTGCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: YISCLDSNTTGS*TGSPRAHVPSG
Trigger: CCCAGATGGCACATGGGCTCTTGGGGAGCCTGTTCAGCTACCTGTGGTGTTGGAATCCAGACACGAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp ACTCCATGGCAACCCACTTGGGGCAATCAAAGAGGTTaGAAGCCTGCATCACCGTGGGCTTGGGTGCATACA +
Preference number: 6 (lower is better)
Translates to: TPWQPTWGNQRG*KPASPWAWVHT
Trigger: TGTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCAAGTGGGTTGCCATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp CACAGCAATGGCTTCTTGATGGCCTCCCAAACATGTTaGAGTGCAGGGGGTAAAGCCAGCGTACTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: HSNGFLMASQTC*SAGGKASVLPV
Trigger: GACTGGGAGTACGCTGGCTTTACCCCCTGCACTGCAACATGTTTGGGAGGCCATCAAGAAGCCATTGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp CTTCGATGTGCCAGCTGGGAGGGCAATCAAACTGATTaGACGCTCGTAAGGCATGCGGCTTTTCCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: LRCASWEGNQTD*TLVRHAAFPLC
Trigger: GCAGAGAGGAAAAGCCGCATGCCTTACGAGCGTGCAATCAGTTTGATTGCCCTCCCAGCTGGCACATCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp CCAAGGGACCACAAGTGGCAGAACAGTGTGTCCAGTTaGCAGGTTCCCAAAAGTGCTCTTGAGGCAGGGACT +
Preference number: 6 (lower is better)
Translates to: PRDHKWQNSVSS*QVPKSALEAGT
Trigger: AGTCCCTGCCTCAAGAGCACTTTTGGGAACCTGGCAACTGGACACACTGTTCTGCCACTTGTGGTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp TCCGTGCAGTTTCTATCACAGGAAGGCCCGAGACAGTaGCTCCAGGCAGCTGGTTTCACCTGCACACAGTAT +
Preference number: 6 (lower is better)
Translates to: SVQFLSQEGPRQ*LQAAGFTCTQY
Trigger: ATACTGTGTGCAGGTGAAACCAGCTGCCTGGAGGCACTGTCTCGGGCCTTCCTGTGATAGAAACTGCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp ATTCTGCTTCTGGGTGCCTGGAGAACTCGCGTTTTCTaGACCTTAGGGAACGCAGCCTTACCGCCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: ILLLGAWRTRVF*TLGNAALPPGS
Trigger: AGAACCAGGCGGTAAGGCTGCGTTCCCTAAGGTCCAGAAAACGCGAGTTCTCCAGGCACCCAGAAGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp GTACTCCCAGTCGTAAGTCATCTCACTGTCCTTCTCTaGGAGACGGCCACCCAGTTCTCGAGACACAGGGCT +
Preference number: 6 (lower is better)
Translates to: VLPVVSHLTVLL*ETATQFSRHRA
Trigger: AGCCCTGTGTCTCGAGAACTGGGTGGCCGTCTCCAAGAGAAGGACAGTGAGATGACTTACGACTGGGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 90 bp CAGCGTCTCAGCTACGGAGACTCTTCGGCCTTTGGCAGTCAGTTTTaGACACACCTGCTTTCTTCTCTGGAATCCAACCCCGCAGGTGAC +
Preference number: 6 (lower is better)
Translates to: QRLSYGDSSAFGSQF*THLLSSLESNPAGD
Trigger: GTCACCTGCGGGGTTGGATTCCAGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGCTGAGACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp CCCTTTTCAAGCGGATGTCCATGCACTCAGCAGAGTTaGGCTGATAACCTCCTCCACATGTCACGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: PFSSGCPCTQQS*ADNLLHMSRCR
Trigger: CCTGCACCGTGACATGTGGAGGAGGTTATCAGCTCAACTCTGCTGAGTGCATGGACATCCGCTTGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp TCAAAAAGCTGCCATCAGTTAACAGCTGTCGACAGGTaGCTCTCCGGTTCTGAGTTCCCCCACCGCATGTCC +
Preference number: 6 (lower is better)
Translates to: SKSCHQLTAVDR*LSGSEFPHRMS
Trigger: GGACATGCGGTGGGGGAACTCAGAACCGGAGAGTCACCTGTCGACAGCTGTTAACTGATGGCAGCTTTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp GGCCAACTCAGCTACCAGCTGATATATCATCTGGGATaGGAGATCGTCGCTGGCCTCTCCCATCTCCATAAG +
Preference number: 6 (lower is better)
Translates to: GQLSYQLIYHLG*EIVAGLSHLHK
Trigger: CTTATGGAGATGGGAGAGGCCAGCGACGATCTCGCATCCCAGATGATATATCAGCTGGTAGCTGAGTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp CTGTCTTTAGGAGCACATGCCCTTGGGGACACCACCTaGACAGTCCCATTGGCTTTTGTCTGCTTGCATGTC +
Preference number: 6 (lower is better)
Translates to: LSLGAHALGDTT*TVPLAFVCLHV
Trigger: GACATGCAAGCAGACAAAAGCCAATGGGACTGTGCAGGTGGTGTCCCCAAGGGCATGTGCTCCTAAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp CAATTTTGCAGCTCCCTGTGTGAATGCAGTCGACTTTaGGAGACTGGAAGCCCCTGCCACAGACTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: QFCSSLCECSRL*ETGSPCHRLLY
Trigger: GTACAGCAGTCTGTGGCAGGGGCTTCCAGTCTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp ATGATCTTGACAGAGGGTTGCAGCAGCGCTCCATCCTaGGTCCATGTGTATGTGGCCTCCTTGCTGGGAGTA +
Preference number: 6 (lower is better)
Translates to: MILTEGCSSAPS*VHVYVASLLGV
Trigger: TACTCCCAGCAAGGAGGCCACATACACATGGACCAAGGATGGAGCGCTGCTGCAACCCTCTGTCAAGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp GTGGAGGACGGTGAACTGTGTCACACAGGCTGTCATTaGCGGTCTGATGAGTCTGGGTGTGTAAACACACAG +
Preference number: 6 (lower is better)
Translates to: VEDGELCHTGCH*RSDESGCVNTQ
Trigger: CTGTGTGTTTACACACCCAGACTCATCAGACCGTCAATGACAGCCTGTGTGACACAGTTCACCGTCCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp GCTACGGAGACTCTTCGGCCTTTGGCAGTCAGTTTTTaGCACACCTGCTTTCTTCTCTGGAATCCAACCCCG +
Preference number: 6 (lower is better)
Translates to: ATETLRPLAVSF*HTCFLLWNPTP
Trigger: CGGGGTTGGATTCCAGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp GTCAGTCCCAATGAGCTTGAGAACGACCGTCTCCTGTaGAGAGCCTGCGATGCATCTGTATACACCAATGTC +
Preference number: 6 (lower is better)
Translates to: VSPNELENDRLL*RACDASVYTNV
Trigger: GACATTGGTGTATACAGATGCATCGCAGGCTCTGCACAGGAGACGGTCGTTCTCAAGCTCATTGGGACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp AGGGACACCTTTTACAGGACAGTGGATTGTCACATTTaGTTGAAGGGCTGCCTCCACAGTGCCTCCCACAAC +
Preference number: 6 (lower is better)
Translates to: RDTFYRTVDCHI*LKGCLHSASHN
Trigger: GTTGTGGGAGGCACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACTGTCCTGTAAAAGGTGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TGGGGCAATCAAAGAGGTTGCAAGCCTGCATCACCGTaGGCTTGGGTGCATACATGCACTTCCATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: WGNQRGCKPASP*AWVHTCTSILP
Trigger: TGGAAGAATGGAAGTGCATGTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp CCATGCAACGTCCAGGACACTGGTTTCCTGGGTCGATaGCCTGTTGAACACATGGACGAATGGAACATGGTT +
Preference number: 6 (lower is better)
Translates to: PCNVQDTGFLGR*PVEHMDEWNMV
Trigger: AACCATGTTCCATTCGTCCATGTGTTCAACAGGCCATCGACCCAGGAAACCAGTGTCCTGGACGTTGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp GTGCAGCTTCATCTGTGGGTTGCAGCCTCCAACATGTaGCCCACGATGGTTGATACACAGAACCACTCGGTA +
Preference number: 6 (lower is better)
Translates to: VQLHLWVAASNM*PTMVDTQNHSV
Trigger: TACCGAGTGGTTCTGTGTATCAACCATCGTGGGCAACATGTTGGAGGCTGCAACCCACAGATGAAGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp CCTGGCACAGGACTTATGAGACGATGCCTTGGGTCCTaGGCACAGCTCATCCGACAAATTCAAAAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PGTGLMRRCLGS*AQLIRQIQKAA
Trigger: GGCAGCTTTTTGAATTTGTCGGATGAGCTGTGCCAAGGACCCAAGGCATCGTCTCATAAGTCCTGTGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp GAGGGACACCTTTTACAGGACAGTGGATTGTCACATTaGCTTGAAGGGCTGCCTCCACAGTGCCTCCCACAA +
Preference number: 6 (lower is better)
Translates to: EGHLLQDSGLSH*LEGLPPQCLPQ
Trigger: TTGTGGGAGGCACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACTGTCCTGTAAAAGGTGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp GGTTGCAGCAGCGCTCCATCCTTGGTCCATGTGTATGTGGCCTCCTaGCTGGGAGTAATGAGGCTGCAAAGTATATTGATGATCTCCGTG +
Preference number: 6 (lower is better)
Translates to: GCSSAPSLVHVYVAS*LGVMRLQSILMISV
Trigger: CACGGAGATCATCAATATACTTTGCAGCCTCATTACTCCCAGCAAGGAGGCCACATACACATGGACCAAGGATGGAGCGCTGCTGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp TCATCCAAAATGATCTTGACAGAGGGTTGCAGCAGCGCTCCATCCTaGGTCCATGTGTATGTGGCCTCCTTGCTGGGAGTAATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSKMILTEGCSSAPS*VHVYVASLLGVMRL
Trigger: CAGCCTCATTACTCCCAGCAAGGAGGCCACATACACATGGACCAAGGATGGAGCGCTGCTGCAACCCTCTGTCAAGATCATTTTGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp CTGCTGGGCAGTCGTGATTGCTGCAAGTCTTGTATCTaGTGTTCTGTCCTTCGCAGTTCCTTCCAGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LLGSRDCCKSCI*CSVLRSSFQSD
Trigger: GTCTGACTGGAAGGAACTGCGAAGGACAGAACATCAGATACAAGACTTGCAGCAATCACGACTGCCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp TACAGGACAGTGGATTGTCACATTTGCTTGAAGGGCTaGCTCCACAGTGCCTCCCACAACAACAGACAGATG +
Preference number: 6 (lower is better)
Translates to: YRTVDCHICLKG*LHSASHNNRQM
Trigger: CATCTGTCTGTTGTTGTGGGAGGCACTGTGGAGGCAGCCCTTCAAGCAAATGTGACAATCCACTGTCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp GTTTCACCTGCACACAGTATCTGTCCGCCACAATTTTaGAGCTCCCTGTGTGAATGCAGTCGACTTTGCGAG +
Preference number: 6 (lower is better)
Translates to: VSPAHSICPPQF*SSLCECSRLCE
Trigger: CTCGCAAAGTCGACTGCATTCACACAGGGAGCTGCAAAATTGTGGCGGACAGATACTGTGTGCAGGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp GATGACACACTCCTCTTTGATGTGCAGCTTCATCTGTaGGTTGCAGCCTCCAACATGTTGCCCACGATGGTT +
Preference number: 6 (lower is better)
Translates to: DDTLLFDVQLHL*VAASNMLPTMV
Trigger: AACCATCGTGGGCAACATGTTGGAGGCTGCAACCCACAGATGAAGCTGCACATCAAAGAGGAGTGTGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp CGGTCTGATGAGTCTGGGTGTGTAAACACACAGCAATaGCTTCTTGATGGCCTCCCAAACATGTTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: RSDESGCVNTQQ*LLDGLPNMLQC
Trigger: GCACTGCAACATGTTTGGGAGGCCATCAAGAAGCCATTGCTGTGTGTTTACACACCCAGACTCATCAGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp AATTCCTCAGGATGGAGGCAGTATACATCTCGTGTCTaGATTCCAACACCACAGGTAGCTGAACAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: NSSGWRQYTSRV*IPTPQVAEQAP
Trigger: GGGAGCCTGTTCAGCTACCTGTGGTGTTGGAATCCAGACACGAGATGTATACTGCCTCCATCCTGAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp TGCACAGCGTCTCAGCTACGGAGACTCTTCGGCCTTTaGCAGTCAGTTTTTGACACACCTGCTTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: CTASQLRRLFGL*QSVFDTPAFFS
Trigger: AGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGCTGAGACGCTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp GCCCAGAGGTTGCCACTGCTTTCCCAAGAGCATTGGTaGCTGTGCAAATGTAGGTTCCTTCATTTTCGAGTG +
Preference number: 6 (lower is better)
Translates to: AQRLPLLSQEHW*LCKCRFLHFRV
Trigger: CACTCGAAAATGAAGGAACCTACATTTGCACAGCCACCAATGCTCTTGGGAAAGCAGTGGCAACCTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp GAAATCAGCCATCAGGGGTCCCGCAATCTTGAAGGTTaGTCTGTCCGCACCCTTCTGAAACTCAATCGTCGT +
Preference number: 6 (lower is better)
Translates to: EISHQGSRNLEG*SVRTLLKLNRR
Trigger: ACGACGATTGAGTTTCAGAAGGGTGCGGACAGACAAACCTTCAAGATTGCGGGACCCCTGATGGCTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp AGCTACGGAGACTCTTCGGCCTTTGGCAGTCAGTTTTaGACACACCTGCTTTCTTCTCTGGAATCCAACCCC +
Preference number: 6 (lower is better)
Translates to: SYGDSSAFGSQF*THLLSSLESNP
Trigger: GGGGTTGGATTCCAGAGAAGAAAGCAGGTGTGTCAAAAACTGACTGCCAAAGGCCGAAGAGTCTCCGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp CACAGTCCCATTGGCTTTTGTCTGCTTGCATGTCACTaGCCGACTGTGAAATCCTTCACCACAAGACGCGGA +
Preference number: 6 (lower is better)
Translates to: HSPIGFCLLACH*PTVKSFTTRRG
Trigger: TCCGCGTCTTGTGGTGAAGGATTTCACAGTCGGCAAGTGACATGCAAGCAGACAAAAGCCAATGGGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp CACTTGGGGCAATCAAAGAGGTTGCAAGCCTGCATCACCGTGGGCTaGGGTGCATACATGCACTTCCATTCTTCCACTTGTAGAATCTCT +
Preference number: 6 (lower is better)
Translates to: HLGQSKRLQACITVG*GAYMHFHSSTCRIS
Trigger: AGAGATTCTACAAGTGGAAGAATGGAAGTGCATGTATGCACCCAAGCCCACGGTGATGCAGGCTTGCAACCTCTTTGATTGCCCCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp GAGCATTTCTTGAAGTCTGGTCATCATAGCGGTATGTaGGGAACTGCTCCCCTGTGGTGTCTTCTAGGAAGC +
Preference number: 6 (lower is better)
Translates to: EHFLKSGHHSGM*GTAPLWCLLGS
Trigger: GCTTCCTAGAAGACACCACAGGGGAGCAGTTCCTCACATACCGCTATGATGACCAGACTTCAAGAAATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp TGGGCTCTGAAGTCTTCTGCATCTGCTGGGCAGTCGTaGTTGCTGCAAGTCTTGTATCTGATGTTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: WALKSSASAGQS*LLQVLYLMFCP
Trigger: AGGACAGAACATCAGATACAAGACTTGCAGCAATCACGACTGCCCAGCAGATGCAGAAGACTTCAGAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp ATAATAATGACCCTGGTACTGCACGTCATTGTAGGCTaGGCACTGCTGGGCTCTGAAGTCTTCTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: IIMTLVLHVIVG*ALLGSEVFCIC
Trigger: GCAGATGCAGAAGACTTCAGAGCCCAGCAGTGCTCAGCCTACAATGACGTGCAGTACCAGGGTCATTATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp GTCTATCACAGCCCACAATCTGGCAGATGCCACTTATaGACATATCCAGAGAGTCAGCATTGCAGCGAGTTC +
Preference number: 6 (lower is better)
Translates to: VYHSPQSGRCHL*TYPESQHCSEF
Trigger: GAACTCGCTGCAATGCTGACTCTCTGGATATGTGCATAAGTGGCATCTGCCAGATTGTGGGCTGTGATAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS GCA 72 bp TTCCCAGCTGTCTATCACAGCCCACAATCTGGCAGATaGCACTTATGCACATATCCAGAGAGTCAGCATTGC +
Preference number: 6 (lower is better)
Translates to: FPAVYHSPQSGR*HLCTYPESQHC
Trigger: GCAATGCTGACTCTCTGGATATGTGCATAAGTGGCATCTGCCAGATTGTGGGCTGTGATAGACAGCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp AGTCTGTCCTGGCACAGGACTTATGAGACGATGCCTTaGGTCCTTGGCACAGCTCATCCGACAAATTCAAAA +
Preference number: 6 (lower is better)
Translates to: SLSWHRTYETMP*VLGTAHPTNSK
Trigger: TTTTGAATTTGTCGGATGAGCTGTGCCAAGGACCCAAGGCATCGTCTCATAAGTCCTGTGCCAGGACAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp CAATGGCCATCCTTCTCCCACTGGATTAGAGACTTCTaGAAGCGTCGCACTGGGCATTTGATGATCACAGAT +
Preference number: 6 (lower is better)
Translates to: QWPSFSHWIRDF*KRRTGHLMITD
Trigger: ATCTGTGATCATCAAATGCCCAGTGCGACGCTTCCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp TTAGAGTTCTTCAGACAATGGCCATCCTTCTCCCACTaGATTAGAGACTTCTGGAAGCGTCGCACTGGGCAT +
Preference number: 6 (lower is better)
Translates to: LEFFRQWPSFSH*IRDFWKRRTGH
Trigger: ATGCCCAGTGCGACGCTTCCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp CTCTCTCCAAGTTTTGTCTTCGTTCCCAGTTTCGCTTaGCTGCATATAGGCATCTGGCATGGTCTCACGAGG +
Preference number: 6 (lower is better)
Translates to: LSPSFVFVPSFA*LHIGIWHGLTR
Trigger: CCTCGTGAGACCATGCCAGATGCCTATATGCAGCAAAGCGAAACTGGGAACGAAGACAAAACTTGGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 72 bp AGCGCTCCATCCTTGGTCCATGTGTATGTGGCCTCCTaGCTGGGAGTAATGAGGCTGCAAAGTATATTGATG +
Preference number: 6 (lower is better)
Translates to: SAPSLVHVYVAS*LGVMRLQSILM
Trigger: CATCAATATACTTTGCAGCCTCATTACTCCCAGCAAGGAGGCCACATACACATGGACCAAGGATGGAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp CCAGGACTGTTGAAGCTGTGCTCTCCTCTGCTTCCTTaGAGTGTTTTGGACTCAATAAAGATCAGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: PGLLKLCSPLLP*SVLDSIKIRAG
Trigger: ACCTGCCCTGATCTTTATTGAGTCCAAAACACTTCAAGGAAGCAGAGGAGAGCACAGCTTCAACAGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS TCA 72 bp CAGTGTGTCCAGTTGCCAGGTTCCCAAAAGTGCTCTTaGGGCAGGGACTTTCCTGTTAAGTTGTTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: QCVQLPGSQKCS*GRDFPVKLLLF
Trigger: AAACAGCAACAACTTAACAGGAAAGTCCCTGCCTCAAGAGCACTTTTGGGAACCTGGCAACTGGACACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp TTCCCAGTTTCATCCAAAATGATCTTGACAGAGGGTTaGAGCAGCGCTCCATCCTTGGTCCATGTGTATGTG +
Preference number: 6 (lower is better)
Translates to: FPVSSKMILTEG*SSAPSLVHVYV
Trigger: CACATACACATGGACCAAGGATGGAGCGCTGCTGCAACCCTCTGTCAAGATCATTTTGGATGAAACTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp AGGTTGCCACTGCTTTCCCAAGAGCATTGGTGGCTGTaGAAATGTAGGTTCCTTCATTTTCGAGTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: RLPLLSQEHWWL*KCRFLHFRVKH
Trigger: GTGCTTCACTCGAAAATGAAGGAACCTACATTTGCACAGCCACCAATGCTCTTGGGAAAGCAGTGGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TTGGTGATGCCAAGCTGCTTAGAGTTCTTCAGACAATaGCCATCCTTCTCCCACTGGATTAGAGACTTCTGG +
Preference number: 6 (lower is better)
Translates to: LVMPSCLEFFRQ*PSFSHWIRDFW
Trigger: CCAGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CCA 72 bp CATCTGTATACACCAATGTCAGGGGCAGCAAGGCTATaGATTTTCAGTGAACCTGACTTGGTGATGCCAAGC +
Preference number: 6 (lower is better)
Translates to: HLYTPMSGAARL*IFSEPDLVMPS
Trigger: GCTTGGCATCACCAAGTCAGGTTCACTGAAAATCCATAGCCTTGCTGCCCCTGACATTGGTGTATACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp GTTAAGTTGTTGCTGTTTATTCTGCTTCTGGGTGCCTaGAGAACTCGCGTTTTCTGGACCTTAGGGAACGCA +
Preference number: 6 (lower is better)
Translates to: VKLLLFILLLGA*RTRVFWTLGNA
Trigger: TGCGTTCCCTAAGGTCCAGAAAACGCGAGTTCTCCAGGCACCCAGAAGCAGAATAAACAGCAACAACTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp GGGGCAGCAAGGCTATGGATTTTCAGTGAACCTGACTaGGTGATGCCAAGCTGCTTAGAGTTCTTCAGACAA +
Preference number: 6 (lower is better)
Translates to: GAARLWIFSEPD*VMPSCLEFFRQ
Trigger: TTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAAGTCAGGTTCACTGAAAATCCATAGCCTTGCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp CTTCCCAGTTTCATCCAAAATGATCTTGACAGAGGGTaGCAGCAGCGCTCCATCCTTGGTCCATGTGTATGT +
Preference number: 6 (lower is better)
Translates to: LPSFIQNDLDRG*QQRSILGPCVC
Trigger: ACATACACATGGACCAAGGATGGAGCGCTGCTGCAACCCTCTGTCAAGATCATTTTGGATGAAACTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp CTTGAAGATGAAATCAGCCATCAGGGGTCCCGCAATCTTGAAGGTTaGTCTGTCCGCACCCTTCTGAAACTCAATCGTCGTGTTTTCTAC +
Preference number: 6 (lower is better)
Translates to: LEDEISHQGSRNLEG*SVRTLLKLNRRVFY
Trigger: GTAGAAAACACGACGATTGAGTTTCAGAAGGGTGCGGACAGACAAACCTTCAAGATTGCGGGACCCCTGATGGCTGATTTCATCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 90 bp GTGTCCATGCTGTATGCTCCCTGTTTCATGGCTGCTTCAAACTGCTaGTTCTTAAACTCCCAGGAGTTATCATTTCCTTCAGAGGTCCGG +
Preference number: 6 (lower is better)
Translates to: VSMLYAPCFMAASNC*FLNSQELSFPSEVR
Trigger: CCGGACCTCTGAAGGAAATGATAACTCCTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCATGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp TCCCATCTCCATAAGCTGGCTCATGTTTCTTATAAGCTCATCAAATaGGGCTGTGTCCATGCTGTATGCTCCCTGTTTCATGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SHLHKLAHVSYKLIK*GCVHAVCSLFHGCF
Trigger: GAAGCAGCCATGAAACAGGGAGCATACAGCATGGACACAGCCCAATTTGATGAGCTTATAAGAAACATGAGCCAGCTTATGGAGATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp TGGATTTTCAGTGAACCTGACTTGGTGATGCCAAGCTaGTTAGAGTTCTTCAGACAATGGCCATCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WIFSEPDLVMPS*LEFFRQWPSFS
Trigger: GGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAAGTCAGGTTCACTGAAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TTGGTGATGCCAAGCTGCTTAGAGTTCTTCAGACAATaGCCATCCTTCTCCCACTGGATTAGAGACTTCCAT +
Preference number: 6 (lower is better)
Translates to: LVMPSCLEFFRQ*PSFSHWIRDFH
Trigger: ATGGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAAGCAGCTTGGCATCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173828.3
CDS TCA 72 bp GGTGGCTGTGCAAATGTAGGTTCCTTCATTTTCGAGTaGAGCACTCTGCAACAACAGGGATCCATTGAAAAG +
Preference number: 6 (lower is better)
Translates to: GGCANVGSFIFE*STLQQQGSIEK
Trigger: CTTTTCAATGGATCCCTGTTGTTGCAGAGTGCTTCACTCGAAAATGAAGGAACCTACATTTGCACAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp GCATTCCTTCAGCTTTGGTTTAGGCTTCACATTTTCTaGGTAGTAATGGCAATAGTGGTCAGGCACTACCCT +
Preference number: 6 (lower is better)
Translates to: AFLQLWFRLHIF*VVMAIVVRHYP
Trigger: AGGGTAGTGCCTGACCACTATTGCCATTACTACCCAGAAAATGTGAAGCCTAAACCAAAGCTGAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173287.8
CDS CAA 90 bp GAAGCACTCTGCAACAACAGGGATCCATTGAAAAGCAAGGAAACATaGTCACTCAGAGATCCTCCTGTCTTCAACCAAGTTACATTAGGC +
Preference number: 6 (lower is better)
Translates to: EALCNNRDPLKSKET*SLRDPPVFNQVTLG
Trigger: GCCTAATGTAACTTGGTTGAAGACAGGAGGATCTCTGAGTGACAATGTTTCCTTGCTTTTCAATGGATCCCTGTTGTTGCAGAGTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp TATAGCACTAGTGAGCTTTCCACATCGGAACCCAGATaGCTGGCTACAGAACATTCATATATCCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: YSTSELSTSEPR*LATEHSYIPCS
Trigger: AGAGCAAGGGATATATGAATGTTCTGTAGCCAGTCATCTGGGTTCCGATGTGGAAAGCTCACTAGTGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS TCA 72 bp TTTCGAGTGAAGCACTCTGCAACAACAGGGATCCATTaGAAAGCAAGGAAACATTGTCACTCAGAGATCCTC +
Preference number: 6 (lower is better)
Translates to: FRVKHSATTGIH*KARKHCHSEIL
Trigger: GAGGATCTCTGAGTGACAATGTTTCCTTGCTTTTCAATGGATCCCTGTTGTTGCAGAGTGCTTCACTCGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp TATAAGCTCATCAAATTGGGCTGTGTCCATGCTGTATaGTCCCTGTTTCATGGCTGCTTCAAACTGCTTGTT +
Preference number: 6 (lower is better)
Translates to: YKLIKLGCVHAV*SLFHGCFKLLV
Trigger: AACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCATGGACACAGCCCAATTTGATGAGCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 90 bp GTGTATGTGGCCTCCTTGCTGGGAGTAATGAGGCTGCAAAGTATATaGATGATCTCCGTGCTTTTTGTAATGTACACTGTATTCCCAATC +
Preference number: 6 (lower is better)
Translates to: VYVASLLGVMRLQSI*MISVLFVMYTVFPI
Trigger: GATTGGGAATACAGTGTACATTACAAAAAGCACGGAGATCATCAATATACTTTGCAGCCTCATTACTCCCAGCAAGGAGGCCACATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS GCA 72 bp ATGCTGTATGCTCCCTGTTTCATGGCTGCTTCAAACTaGTTGTTCTTAAACTCCCAGGAGTTATCATTTCCT +
Preference number: 6 (lower is better)
Translates to: MLYAPCFMAASN*LFLNSQELSFP
Trigger: AGGAAATGATAACTCCTGGGAGTTTAAGAACAAGCAGTTTGAAGCAGCCATGAAACAGGGAGCATACAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CCA 72 bp TTAGAGTTCTTCAGACAATGGCCATCCTTCTCCCACTaGATTAGAGACTTCCATTCTATTACCTGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: LEFFRQWPSFSH*IRDFHSITCRR
Trigger: TCTTCTGCAGGTAATAGAATGGAAGTCTCTAATCCAGTGGGAGAAGGATGGCCATTGTCTGAAGAACTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173828.3
CDS CAA 72 bp CATAAGCTGGCTCATGTTTCTTATAAGCTCATCAAATaGGGCTGTGTCCATGCTGTATGCTCCCTGTTTCAT +
Preference number: 6 (lower is better)
Translates to: HKLAHVSYKLIK*GCVHAVCSLFH
Trigger: ATGAAACAGGGAGCATACAGCATGGACACAGCCCAATTTGATGAGCTTATAAGAAACATGAGCCAGCTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp GCCTCCTTGCTGGGAGTAATGAGGCTGCAAAGTATATaGATGATCTCCGTGCTTTTTGTAATGTACACTGTA +
Preference number: 6 (lower is better)
Translates to: ASLLGVMRLQSI*MISVLFVMYTV
Trigger: TACAGTGTACATTACAAAAAGCACGGAGATCATCAATATACTTTGCAGCCTCATTACTCCCAGCAAGGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3
CDS CAA 72 bp TGCAACAACAGGGATCCATTGAAAAGCAAGGAAACATaGTCACTCAGAGATCCTCCTGTCTTCAACCAAGTT +
Preference number: 6 (lower is better)
Translates to: CNNRDPLKSKET*SLRDPPVFNQV
Trigger: AACTTGGTTGAAGACAGGAGGATCTCTGAGTGACAATGTTTCCTTGCTTTTCAATGGATCCCTGTTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173287.8
ENSMUST00000173828.3