RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030022

Ensembl transcript IDs: ENSMUST00000113438.8, ENSMUST00000167391.2

Found 558 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTaGCCAAAGTTTTCAGGTAAAAGGTGGTCGATCTCCTGTCGTTCT +
Preference number: 1 (lower is better)
Translates to: PGRVLGSQPQGKSYH*PKFSGKRWSISCRS
Trigger: AGAACGACAGGAGATCGACCACCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 90 bp CCACACACACGCACACAGATGCACCCAAATTCAAGGTGGAGGTATTaGATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: PHTRTQMHPNSRWRY*ITILHPSPMASSSE
Trigger: CTCTGAAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGCGTGTGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 90 bp CAGTGTCACTCTGTAATGAAGCTTTTGGTGGACCCTCCCAATGATTaGCAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACC +
Preference number: 1 (lower is better)
Translates to: QCHSVMKLLVDPPND*QESKAPWSRVDHIT
Trigger: GGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTGTCAATCATTGGGAGGGTCCACCAAAAGCTTCATTACAGAGTGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 90 bp TTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACCCTCCCAATaGTTGACAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATAT +
Preference number: 1 (lower is better)
Translates to: FPVSLCNEAFGGPSQ*LTGVQGTMEQSRSY
Trigger: ATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTGTCAATCATTGGGAGGGTCCACCAAAAGCTTCATTACAGAGTGACACTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR GCA 90 bp ACACACACACACACGCGCAGACAGATCCACACACACGCACACAGATaGACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATC +
Preference number: 1 (lower is better)
Translates to: THTHTRRQIHTHAHR*TQIQGGGIELLSFI
Trigger: GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGCGTGTGTGTGGATCTGTCTGCGCGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CCA 90 bp GACCACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTaGATTCGTGGAAGATCAGAAAGACCTGGGCATCTTAGACACCAG +
Preference number: 1 (lower is better)
Translates to: DHCLSTFIPERSNKR*IRGRSERPGHLRHQ
Trigger: CTGGTGTCTAAGATGCCCAGGTCTTTCTGATCTTCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR TCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGACCCTCCCAATGATTaGCAGGAGTCCAAGGCACCA +
Preference number: 2 (lower is better)
Translates to: KRWSISCRSLSMLRGVKADPPND*QESKAP
Trigger: TGGTGCCTTGGACTCCTGTCAATCATTGGGAGGGTC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAATTCATCCGTCTCCTATaGCTTCCTCTTCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TRQGIRLPASREVISLAKFIRLL*LPLQSP
Trigger: GGGGCTCTGAAGAGGAAGCCATAGGAGACGGATGAA...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCATGCAGCTGTCTGACTaGAAGGGGGAGGATCATGCA +
Preference number: 2 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAMQLSD*KGEDHA
Trigger: TGCATGATCCTCCCCCTTGCAGTCAGACAGCTGCAT...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACCATGCCCAAGAATGTaGGTTGTGTGTCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGPCPRM*VVCLLS
Trigger: AGAAAGGAGACACACAACCCACATTCTTGGGCATGG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAGAAGAGAGCAAGCCATaGCCAAGAATGTGGGTTGTG +
Preference number: 2 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGEESKP*PRMWVV
Trigger: CACAACCCACATTCTTGGGCATGGCTTGCTCTCTTC...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGTTCATCCGTCTCCTATaGCTTCCTCTTCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVFIRLL*LPLQSP
Trigger: GGGGCTCTGAAGAGGAAGCCATAGGAGACGGATGAA...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAAAGATGAGATCTTTTTaGGATGGGGCTCATCTAAAC +
Preference number: 2 (lower is better)
Translates to: TRQGIRLPASREVISLAKKMRSF*DGAHLN
Trigger: GTTTAGATGAGCCCCATCCCAAAAAGATCTCATCTT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 90 bp TCCACACACACGCACACAGATGCACCCAAATTCAAGGTGGAGGTATaGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCAGA +
Preference number: 2 (lower is better)
Translates to: STHTHTDAPKFKVEV*NYYPSSVSYGFLFR
Trigger: TCTGAAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGCGTGTGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTCAAGGTGGAGGTATTaGATTACTATCCTTCATCCG +
Preference number: 2 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINSRWRY*ITILHP
Trigger: CGGATGAAGGATAGTAATTCAATACCTCCACCTTGA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR TCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGATTCCCAGAGATCACATaGAACGGAATAAAGACTATG +
Preference number: 2 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGFPEIT*NGIKTM
Trigger: CATAGTCTTTATTCCGTTTCATGTGATCTCTGGGAA...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGCCATGCCCAAGAATGTaGGTTGTGTGTCTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVPCPRM*VVCLLS
Trigger: AGAAAGGAGACACACAACCCACATTCTTGGGCATGG...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTCCCAGAGATCACATaGAACGGAATAAAGACTATG +
Preference number: 2 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINFPEIT*NGIKTM
Trigger: CATAGTCTTTATTCCGTTTCATGTGATCTCTGGGAA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 90 bp AATGACACTTGTTCAAACACCAAGTGCTCTGGCATTTCTGTGGAGTaGGGGAATACTGTCAGGGTTTTCCTAATCTCTTTGGTCTTGGAA +
Preference number: 2 (lower is better)
Translates to: NDTCSNTKCSGISVE*GNTVRVFLISLVLE
Trigger: TTCCAAGACCAAAGAGATTAGGAAAACCCTGACAGTATTCCCCAACTCCACAGAAATGCCAGAGCACTTGGTGTTTGAACAAGTGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTAAACGTCCCCACAATTaGCAAAAATACCCTTATTCA +
Preference number: 2 (lower is better)
Translates to: QESKAPWSRVDHITNNNSKRPHN*QKYPYS
Trigger: TGAATAAGGGTATTTTTGGCAATTGTGGGGACGTTT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 90 bp GTGATGTTGCTAACTTACTCATTGGCTAATGAAACGTCCCCACAATaGCCAAAAATACCCTTATTCAACCCACATAGCACCTTGATGTCA +
Preference number: 2 (lower is better)
Translates to: VMLLTYSLANETSPQ*PKIPLFNPHSTLMS
Trigger: TGACATCAAGGTGCTATGTGGGTTGAATAAGGGTATTTTTGGCAATTGTGGGGACGTTTCATTAGCCAATGAGTAAGTTAGCAACATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACATGCTATTAATTTATaGCTCTTCCTTTTGAACGGA +
Preference number: 2 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSHAINL*LFLLNG
Trigger: TCCGTTCAAAAGGAAGAGGCATAAATTAATAGCATG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCATGCTATTAATTTATaGCTCTTCCTTTTGAACGGA +
Preference number: 2 (lower is better)
Translates to: QESKAPWSRVDHITNNNSHAINL*LFLLNG
Trigger: TCCGTTCAAAAGGAAGAGGCATAAATTAATAGCATG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 90 bp AAACGGAATAAAGACTATGATGAACAGTTGGTACAACCTGTGATGTaGCTAACTTACTCATTGGCTAATGAAACGTCCCCACAATTGCCA +
Preference number: 2 (lower is better)
Translates to: KRNKDYDEQLVQPVM*LTYSLANETSPQLP
Trigger: TGGCAATTGTGGGGACGTTTCATTAGCCAATGAGTAAGTTAGCAACATCACAGGTTGTACCAACTGTTCATCATAGTCTTTATTCCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 90 bp TATGATGAACAGTTGGTACAACCTGTGATGTTGCTAACTTACTCATaGGCTAATGAAACGTCCCCACAATTGCCAAAAATACCCTTATTC +
Preference number: 2 (lower is better)
Translates to: YDEQLVQPVMLLTYS*ANETSPQLPKIPLF
Trigger: GAATAAGGGTATTTTTGGCAATTGTGGGGACGTTTCATTAGCCAATGAGTAAGTTAGCAACATCACAGGTTGTACCAACTGTTCATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAAAACGTCCCCACAATTaGCAAAAATACCCTTATTCA +
Preference number: 2 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKKRPHN*QKYPYS
Trigger: TGAATAAGGGTATTTTTGGCAATTGTGGGGACGTTT...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTATCCCTCATTGAAATaGTTGAGACCATCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYYPSLK*LRPSVC
Trigger: ACACACTGATGGTCTCAAGCATTTCAATGAGGGATA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAAACCCACATAGCACCTaGATGTCAGCTAGGTTGTTA +
Preference number: 3 (lower is better)
Translates to: TRQGIRLPASREVISLAKNPHST*MSARLL
Trigger: TAACAACCTAGCTGACATCAAGGTGCTATGTGGGTT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 72 bp TCACTCTGTAATGAAGCTTTTGGTGGACCCTCCCAATaGTTGACAGGAGTCCAAGGCACCATGGAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: SLCNEAFGGPSQ*LTGVQGTMEQS
Trigger: ACTCTGCTCCATGGTGCCTTGGACTCCTGTCAATCATTGGGAGGGTCCACCAAAAGCTTCATTACAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGTACAACCTGTGATGTaGCTAACTTACTCATTGGCT +
Preference number: 3 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAVQPVM*LTYSLA
Trigger: AGCCAATGAGTAAGTTAGCAACATCACAGGTTGTAC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 72 bp CGCACACAGATGCACCCAAATTCAAGGTGGAGGTATTaGATTACTATCCTTCATCCGTCTCCTATGGCTTCC +
Preference number: 3 (lower is better)
Translates to: RTQMHPNSRWRY*ITILHPSPMAS
Trigger: GGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CCA 72 bp GTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTaGCCAAAGTTTTCAGGTAAAAGGTGGTCGATCTCC +
Preference number: 3 (lower is better)
Translates to: VLGSQPQGKSYH*PKFSGKRWSIS
Trigger: GGAGATCGACCACCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CAA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTCAAGGTGGAGGTATaGAATTACTATCCTTCATCC +
Preference number: 3 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINFKVEV*NYYPSS
Trigger: GGATGAAGGATAGTAATTCAATACCTCCACCTTGAA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR-3UTR CAA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGTTCAAGGTGGAGGTATaGAATTACTATCCTTCATCC +
Preference number: 3 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRFKVEV*NYYPSS
Trigger: GGATGAAGGATAGTAATTCAATACCTCCACCTTGAA...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CCA 72 bp AAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGTaGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGG +
Preference number: 3 (lower is better)
Translates to: KSYHWPKFSGKR*SISCRSLSMLR
Trigger: CCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTTACCTGAAAACTTTGGCCAATGATATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CCA 72 bp CTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTaGATTCGTGGAAGATCAGAAAGACCTGGGCATCTT +
Preference number: 3 (lower is better)
Translates to: LSTFIPERSNKR*IRGRSERPGHL
Trigger: AAGATGCCCAGGTCTTTCTGATCTTCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 72 bp AGCACCAAGGCAGCACAATTCTTCCCAGAGATCACATaGAACGGAATAAAGACTATGATGAACAGTTGGTAC +
Preference number: 3 (lower is better)
Translates to: STKAAQFFPEIT*NGIKTMMNSWY
Trigger: GTACCAACTGTTCATCATAGTCTTTATTCCGTTTCATGTGATCTCTGGGAAGAATTGTGCTGCCTTGGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR GCA 72 bp TTGTCATATACTACATATAATGTAGAGTACGTAAAATaGAGCTGTCTGACTGCAAGGGGGAGGATCATGCAC +
Preference number: 3 (lower is better)
Translates to: LSYTTYNVEYVK*SCLTARGRIMH
Trigger: GTGCATGATCCTCCCCCTTGCAGTCAGACAGCTGCATTTTACGTACTCTACATTATATGTAGTATATGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR TCA 72 bp ATATTAAACTTTACATCATTAGGGTGTTCCGCAGGTTaGGTATCCCTCATTGAAATGCTTGAGACCATCAGT +
Preference number: 3 (lower is better)
Translates to: ILNFTSLGCSAG*VSLIEMLETIS
Trigger: ACTGATGGTCTCAAGCATTTCAATGAGGGATACTCAACCTGCGGAACACCCTAATGATGTAAAGTTTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCTGCTGGCCGAAGGCTaGGAGGCGGTAGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKALLAEG*EAVVLL
Trigger: CAGGAGCACTACCGCCTCTCAGCCTTCGGCCAGCAG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAACCACCACTCGCCTCTaGGAGCCTCCGGCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGTTTRL*EPPAQV
Trigger: TACCTGCGCCGGAGGCTCCCAGAGGCGAGTGGTGGT...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCGCCAGCCTTCCATCTaGGGCACCGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINRQPSI*GTVLLG
Trigger: GCCGAGGAGGACGGTGCCCCAGATGGAAGGCTGGCG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAATGCCAACTCTCCAGGTaGCCGAGACAGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKCQLSR*PRQDSP
Trigger: GGGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCA...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCCATTGAGGGCACGGTaGCATGGAGCAGTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAPLRAR*HGAVLV
Trigger: GACCAGGACTGCTCCATGTCACCGTGCCCTCAATGG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGGTGCAGCCTGTCCTTaGGCACGGCCGCCGCGGAGT +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLGAACP*ARPPRS
Trigger: ACTCCGCGGCGGCCGTGCGCAAGGACAGGCTGCACC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAACGGAAGTCTCGCTTCTaGTTCATGCAGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKRKSRF*FMQGSV
Trigger: CACGGAGCCCTGCATGAAGCAGAAGCGAGACTTCCG...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGCCCCTTGGCAGGGCTTaGTGCATGCTTGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRPLGRA*CMLATA
Trigger: GGCCGTGGCAAGCATGCAGCAAGCCCTGCCAAGGGG...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAACCTGGCGGTGCTTATaGCCTTTCCCACAGGTGACC +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKTWRCL*PFPQVT
Trigger: GGTCACCTGTGGGAAAGGGCATAAGCACCGCCAGGT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACCCCAGGGACCCGCCTaGCAAGCTGCACACTCTGGC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSPQGPA*QAAHSG
Trigger: GCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTGGGG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACCCCAGGGACCCGCCTaGCAAGCTGCACACTCTGGC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGPQGPA*QAAHSG
Trigger: GCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTGGGG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCTTCAGTGACAGGTCCTaGCTGGGGCAGCCGGTCACA +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAFSDRS*LGQPVT
Trigger: TGTGACCGGCTGCCCCAGCCAGGACCTGTCACTGAA...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGGGGCGGCTGGGCGCCTaGGCAGTTCACTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRGRLGA*AVHCGL
Trigger: CAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCC...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTGGAGGCCGCTGGTCTaGGTCACAGTGTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFWRPLV*VTVCAV
Trigger: CACAGCACACACTGTGACTCAGACCAGCGGCCTCCA...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCCTCGGCACCTTCTGTaGCCATGTGGCTTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAPRHLL*PCGLGR
Trigger: CCTTCCTAAGCCACATGGGCACAGAAGGTGCCGAGG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAAGCAACTGCCCCAGTTaGCAACTCTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGSNCPS*QLSRWP
Trigger: CGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCT...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCGTCTCCGCTCCCCTTaGCAGGGCTTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINRLRSP*QGLLHA
Trigger: AGCATGCAGCAAGCCCTGCCAAGGGGAGCGGAGACG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGATTCAGTGACAGGTCCTaGCTGGGGCAGCCGGTCACA +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGFSDRS*LGQPVT
Trigger: TGTGACCGGCTGCCCCAGCCAGGACCTGTCACTGAA...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTCCTGGGTGTCGGTTaGCCTAGTTGCTGCGTTACA +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKVLGVG*PSCCVT
Trigger: TGTAACGCAGCAACTAGGCCAACCGACACCCAGGAC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGATTCCCTCCAAGCACGTaGGTGCGGCTAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGFPPST*VRLGLS
Trigger: TGACAGCCCTAGCCGCACCCACGTGCTTGGAGGGAA...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCGGAATCGGTCACCGTTaGCCCGCTGACAGACCACCA +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFGIGHR*PADRPP
Trigger: TGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCC...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCGCCAGCCTTCCATCTaGGGCACCGTCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGRQPSI*GTVLLG
Trigger: GCCGAGGAGGACGGTGCCCCAGATGGAAGGCTGGCG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACGGTCTGGAGGCCGCTaGTCTGAGTCACAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGRSGGR*SESQCV
Trigger: CACACACTGTGACTCAGACCAGCGGCCTCCAGACCG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTGGGCGGCTGGGCGCCTaGGCAGTTCACTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSGRLGA*AVHCGL
Trigger: CAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCC...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTGCCAACTCTCCAGGTaGCCGAGACAGGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFCQLSR*PRQDSP
Trigger: GGGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCA...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGGTGACCAAGCACTCTaGCCAGTCTCCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKGDQAL*PVSCFP
Trigger: TGGAAAACAGGAGACTGGTCAGAGTGCTTGGTCACC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACCTCGTCCCGGCAGCTaGCGTATCTCATCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSPRPGS*RISSGY
Trigger: GTACCCGGATGAGATACGTCAGCTGCCGGGACGAGG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAACTTTCCACAGGTCACTaGGCACTCAGACCATTCTCC +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKLSTGH*ALRPFS
Trigger: GGAGAATGGTCTGAGTGCTCAGTGACCTGTGGAAAG...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAACACTCGGTTCCATCTaGCCAGGGCGTGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGTLGSI*PGRVLS
Trigger: ACTCAGCACACGCCCTGGGCAGATGGAACCGAGTGT...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTCGCTTCTGCTTCATaGAGGGCTCCGTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLASAS*RAPCCR
Trigger: CCTGCAACACGGAGCCCTGCATGAAGCAGAAGCGAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACGGAAGTCTCGCTTCTaGTTCATGCAGGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGRKSRF*FMQGSV
Trigger: CACGGAGCCCTGCATGAAGCAGAAGCGAGACTTCCG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCCCCTTGGCAGGGCTTaGTGCATGCTTGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLPLGRA*CMLATA
Trigger: GGCCGTGGCAAGCATGCAGCAAGCCCTGCCAAGGGG...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCAGCGCCATCCACCTGTaGTGCACTCTCCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKASAIHL*CTLLSI
Trigger: AATGCTCAGGAGAGTGCAGCACAGGTGGATGGCGCT...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACACCCGCCTGCCAAGCTaGACACTCTGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINTRLPS*TLWLLT
Trigger: TGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGT...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACAGCCCACATGCCTCTaGTGCACGCCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSQPTCL*CTPWPQ
Trigger: CTGTGGCCAAGGCGTGCAGCAGAGGCATGTGGGCTG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACAGCCCACATGCCTCTaGTGCACGCCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGQPTCL*CTPWPQ
Trigger: CTGTGGCCAAGGCGTGCAGCAGAGGCATGTGGGCTG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGCACCTCCAGGCCAGTaGCGGAGGATGGGGTACACT +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSAPPGQ*RRMGYT
Trigger: AGTGTACCCCATCCTCCGGCACTGGCCTGGAGGTGC...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGCACCTCCAGGCCAGTaGCGGAGGATGGGGTACACT +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLAPPGQ*RRMGYT
Trigger: AGTGTACCCCATCCTCCGGCACTGGCCTGGAGGTGC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGGGGGTTCACTCGGATaGGAGACGCGATCTCATATT +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKGGSLG*ETRSHI
Trigger: AATATGAGATCGCGTCTCCCATCCGAGTGAACCCCC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGGAATCGGTCACCGTTaGCCCGCTGACAGACCACCA +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINGIGHR*PADRPP
Trigger: TGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCGACACGCTCCGACTCTaGTCTGCTGTAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFDTLRL*SAVGAA
Trigger: TGCAGCTCCTACAGCAGACCAGAGTCGGAGCGTGTC...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCGGTCTGGAGGCCGCTaGTCTGAGTCACAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINRSGGR*SESQCV
Trigger: CACACACTGTGACTCAGACCAGCGGCCTCCAGACCG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACGATCTTCGCCAAACTaGCACCAGACCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGRSSPN*HQTWRC
Trigger: GCACCGCCAGGTCTGGTGTCAGTTTGGCGAAGATCG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACATCCCTGTCCACAAGTaGCACTGCACTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINIPVHK*HCTVPR
Trigger: CCTGGGGACAGTGCAGTGTCACTTGTGGACAGGGAT...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCCTCGTCCCGGCAGCTaGCGTATCTCATCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGPRPGS*RISSGY
Trigger: GTACCCGGATGAGATACGTCAGCTGCCGGGACGAGG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATCACCGTTGGCCCGCTaGCAGACCACCAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSSPLAR*QTTSLV
Trigger: GACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATTCACTTGCCTCGGGTaGAGCCTGTCCTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSFTCLG*SLSLRT
Trigger: CGTGCGCAAGGACAGGCTGCACCCGAGGCAAGTGAA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGAAGTTCAGTGTTGGTaGCATGACATGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKEVQCW*HDMLGT
Trigger: AGTCCCCAGCATGTCATGGCACCAACACTGAACTTC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGCTCGCTTCTGCTTCATaGAGGGCTCCGTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRLASAS*RAPCCR
Trigger: CCTGCAACACGGAGCCCTGCATGAAGCAGAAGCGAG...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCACCAGACCTGGCGGTaGTTATGCCCTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINHQTWR*LCPFPQ
Trigger: CTGTGGGAAAGGGCATAAGCACCGCCAGGTCTGGTG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCCCACATGCCTCTGCTaGACGCCTTGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGPTCLC*TPWPQD
Trigger: GTCCTGTGGCCAAGGCGTGCAGCAGAGGCATGTGGG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAACGCGGACCTCCCTTTTaGACATGGAGACAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKRGPPF*TWRQQS
Trigger: ACTTTGTTGTCTCCATGTCCAAAAGGGAGGTCCGCG...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGGAGGGCACGGTGACATaGAGCAGTCCTGGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKREGTVT*SSPGQS
Trigger: AGACTGACCAGGACTGCTCCATGTCACCGTGCCCTC...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATTCCCTCCAAGCACGTaGGTGCGGCTAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSFPPST*VRLGLS
Trigger: TGACAGCCCTAGCCGCACCCACGTGCTTGGAGGGAA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAATTCACAACTCAAGTCTaGGAATCGGTCACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKFTTQV*ESVTVG
Trigger: GCCAACGGTGACCGATTCCCAGACTTGAGTTGTGAA...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCAGAACACGAGCTCCATaGGCCAGTACTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFRTRAP*ASTPCS
Trigger: GCTGCATGGAGTACTGGCCCATGGAGCTCGTGTTCT...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACTCTGCTGCACGCCTTaGCCACAGGACACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGLCCTP*PQDTEH
Trigger: GTGCTCTGTGTCCTGTGGCCAAGGCGTGCAGCAGAG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAGCCAGTGCCGGAGGATaGGGTACACTTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGASAGG*GTLSTV
Trigger: TACTGTGGAAAGTGTACCCCATCCTCCGGCACTGGC...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCGATCTTCGCCAAACTaGCACCAGACCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLRSSPN*HQTWRC
Trigger: GCACCGCCAGGTCTGGTGTCAGTTTGGCGAAGATCG...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAATCCCTGTCCACAAGTaGCACTGCACTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGIPVHK*HCTVPR
Trigger: CCTGGGGACAGTGCAGTGTCACTTGTGGACAGGGAT...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTCACCGTTGGCCCGCTaGCAGACCACCAGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGSPLAR*QTTSLV
Trigger: GACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGA...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTTGTGTGTCCCGATCTaGCAGCCCACATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLLCVPI*QPTCLC
Trigger: GCAGAGGCATGTGGGCTGTCAGATCGGGACACACAA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCTGATGACCGCAGTGTaGTCGGACTTGGTATTGACA +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKALMTAV*SDLVLT
Trigger: TGTCAATACCAAGTCCGAGCACACTGCGGTCATCAG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAACCAGGATCCATCAATTaGAGGGCCCTCCATTTCTTT +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKPGSIN*RALHFF
Trigger: AAAGAAATGGAGGGCCCTGCAATTGATGGATCCTGG...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAACCTGGCGGTGCTTATaGCCTTTCCCACAGGTGACC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGTWRCL*PFPQVT
Trigger: GGTCACCTGTGGGAAAGGGCATAAGCACCGCCAGGT...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTCACCAGACCTGGCGGTaGTTATGCCCTTTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLHQTWR*LCPFPQ
Trigger: CTGTGGGAAAGGGCATAAGCACCGCCAGGTCTGGTG...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTACCCGCCTGCCAAGCTaGACACTCTGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLTRLPS*TLWLLT
Trigger: TGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGT...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGTCGGTTGGCCTAGTTaGTGCGTTACAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAVGWPS*CVTVIV
Trigger: GACAATGACTGTAACGCAGCAACTAGGCCAACCGAC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGAGCAACTGCCCCAGTTaGCAACTCTCCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVSNCPS*QLSRWP
Trigger: CGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCT...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGTAGAAGTTCAGTGTTaGTGCCATGACATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAVEVQC*CHDMLG
Trigger: CCCCAGCATGTCATGGCACCAACACTGAACTTCTAC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAACCACATCCAGGGGTTaGTGTAGAAGTTCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKTTSRG*CRSSVL
Trigger: CAACACTGAACTTCTACACCAACCCCTGGATGTGGT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGTGACAGGTCCTGGCTaGGGCAGCCGGTCACATCTT +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGVTGPG*GSRSHL
Trigger: AAGATGTGACCGGCTGCCCCAGCCAGGACCTGTCAC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGCATGGGCTCCGGCTTaGCCTCAGGGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGAWAPA*PQGHTF
Trigger: GAATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGCATGGGCTCCGGCTTaGCCTCAGGGTCACACATTC +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLAWAPA*PQGHTF
Trigger: GAATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAACCACCACTCGCCTCTaGGAGCCTCCGGCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKTTTRL*EPPAQV
Trigger: TACCTGCGCCGGAGGCTCCCAGAGGCGAGTGGTGGT...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCCTTCTGTGCCCATGTaGCTTAGGAAGGTGCTTACA +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAPSVPM*LRKVLT
Trigger: TGTAAGCACCTTCCTAAGCCACATGGGCACAGAAGG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCTCTGCTGCACGCCTTaGCCACAGGACACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGLCCTP*PQDTEH
Trigger: GTGCTCTGTGTCCTGTGGCCAAGGCGTGCAGCAGAG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACTGTGCACCTCACTTTaGTCCTCTGCTACGCATACC +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGLCTSL*SSATHT
Trigger: GGTATGCGTAGCAGAGGACCAAAGTGAGGTGCACAG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACTGGCTTCGTATCAGTaGGGCATAAGTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGLASYQ*GISGWV
Trigger: AACCCAGCCACTTATGCCCCACTGATACGAAGCCAG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTGGCTTCGTATCAGTaGGGCATAAGTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLASYQ*GISGWV
Trigger: AACCCAGCCACTTATGCCCCACTGATACGAAGCCAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACAGCAGTCCCCAGCGGTaGCAAAAGGAACAGGATGTC +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINSSPQR*QKEQDV
Trigger: GACATCCTGTTCCTTTTGCCACCGCTGGGGACTGCT...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAGCCCCTGTGGACATTTaGCAGCACTGTAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGAPVDI*QHCSSP
Trigger: GGGACTGCTACAGTGCTGCCAAATGTCCACAGGGGC...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGGCCAGTGCCGGAGGATaGGGTACACTTTCCACAGTA +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRASAGG*GTLSTV
Trigger: TACTGTGGAAAGTGTACCCCATCCTCCGGCACTGGC...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACACATGGCCCAGCTCGTaGGCTATTGTGAAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINTWPSS*AIVKAV
Trigger: CACAGCTTTCACAATAGCTCACGAGCTGGGCCATGT...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGCCCAGGGCGTGTGCTaGGTCCTGCAGCCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKAQGVC*VLQPLC
Trigger: ACACAAAGGCTGCAGGACTCAGCACACGCCCTGGGC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACCCACGGACAACACCTaGAGGAGAAGTTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSPTDNT*RRSSSS
Trigger: CGAGGAAGAACTTCTCCTTCAGGTGTTGTCCGTGGG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCCCACGGACAACACCTaGAGGAGAAGTTCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSPTDNT*RRSSSS
Trigger: CGAGGAAGAACTTCTCCTTCAGGTGTTGTCCGTGGG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGGTGACCAAGCACTCTaGCCAGTCTCCTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINGDQAL*PVSCFP
Trigger: TGGAAAACAGGAGACTGGTCAGAGTGCTTGGTCACC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTCAGACCATTCTCCTGTaGTCCACACGTACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLQTILL*STRTRR
Trigger: CCTGCGAGTACGTGTGGATCACAGGAGAATGGTCTG...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTGTTTCCTGCCACTCTaGAGAACAACTTGCACCGGT +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFCFLPL*RTTCTG
Trigger: ACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACA...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGGCCATCCACCTGTGCTaGACTCTCCTGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRAIHLC*TLLSIS
Trigger: AGAAATGCTCAGGAGAGTGCAGCACAGGTGGATGGC...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAGTCGGTTGGCCTAGTTaGTGCGTTACAGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGVGWPS*CVTVIV
Trigger: GACAATGACTGTAACGCAGCAACTAGGCCAACCGAC...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCCAGTCTTGTCCGCATaGCTCCACCACACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLPVLSA*LHHTAW
Trigger: CCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGG...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGCCTCGGCACCTTCTGTaGCCATGTGGCTTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVPRHLL*PCGLGR
Trigger: CCTTCCTAAGCCACATGGGCACAGAAGGTGCCGAGG...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCTCACTCTCTCTGGCTaGTTTGTGTGTCCCGATCTG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINLTLSG*FVCPDL
Trigger: CAGATCGGGACACACAAAGCAGCCAGAGAGAGTGAG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTGAGTCACAGTGTGTaGTGTGCACCTCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLSHSV*CAPHFG
Trigger: ACCAAAGTGAGGTGCACAGCACACACTGTGACTCAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGAGCAGGTCCCAAAGTaGCTCCAACCTCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLEQVPK*LQPPQD
Trigger: ATCCTGGGGAGGTTGGAGCCACTTTGGGACCTGCTC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACGTCTCCGCTCCCCTTaGCAGGGCTTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKRLRSP*QGLLHA
Trigger: AGCATGCAGCAAGCCCTGCCAAGGGGAGCGGAGACG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAACCATCCTGCTGTATTTaGCACAGTGGATGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKPSCCI*HSGCLK
Trigger: CTTTAGACATCCACTGTGCCAAATACAGCAGGATGG...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCCTGGTTACTCGGTCTaGGTTGACTGCTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFPGYSV*VDCYRN
Trigger: GTTTCTGTAGCAGTCAACCCAGACCGAGTAACCAGG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGCCAGTATGGAAGGGTaGCAAGATGCTAATTCACAG +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAASMEG*QDANSQ
Trigger: CTGTGAATTAGCATCTTGCCACCCTTCCATACTGGC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTAGAACACGAGCTCCATaGGCCAGTACTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSRTRAP*ASTPCS
Trigger: GCTGCATGGAGTACTGGCCCATGGAGCTCGTGTTCT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGACACGCTCCGACTCTaGTCTGCTGTAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGDTLRL*SAVGAA
Trigger: TGCAGCTCCTACAGCAGACCAGAGTCGGAGCGTGTC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTAGCAGTCCCCAGCGGTaGCAAAAGGAACAGGATGTC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSSPQR*QKEQDV
Trigger: GACATCCTGTTCCTTTTGCCACCGCTGGGGACTGCT...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATTTCCGACTGCACTTTaGCCACATCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSFPTAL*PHPGVG
Trigger: ACCAACCCCTGGATGTGGTCAAAGTGCAGTCGGAAA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAATTGTCATCGACCACTaGCATATAAGTCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: TRQGIRLPASREVISLAKIVIDH*HISPHD
Trigger: ATCATGGGGACTTATATGTCAGTGGTCGATGACAAT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCACATGGTCGCTGTAGTTaGCACACACTACTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSHGRCS*HTLLVG
Trigger: CCCGACAAGTAGTGTGTGTCAACTACAGCGACCATG...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTCATGGTCGCTGTAGTTaGCACACACTACTTGTCGGG +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLHGRCS*HTLLVG
Trigger: CCCGACAAGTAGTGTGTGTCAACTACAGCGACCATG...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTAGCGTAATTCCCTTGTaGCGTCCATCTGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSSVIPL*RPSGRL
Trigger: GAGTCTGCCAGATGGACGTCACAAGGGAATTACGCT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTAGCGTAATTCCCTTGTaGCGTCCATCTGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSVIPL*RPSGRL
Trigger: GAGTCTGCCAGATGGACGTCACAAGGGAATTACGCT...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCTCCATCTGTCCCTTGTaGTGTTTGTCTGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKASICPL*CLSGCY
Trigger: ATAGCAACCAGACAAACAGCACAAGGGACAGATGGA...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGGTTGGTGCCATGACATaGTGGGGACTCTTAACTCCT +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRVGAMT*WGLLTP
Trigger: AGGAGTTAAGAGTCCCCAGCATGTCATGGCACCAAC...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCGATCAGACTCCCTGGTaGAAACAAGTTTTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFDQTPW*KQVFVS
Trigger: GGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATC...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAAACCACACTGGGCACTaGATTCGCTCTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGNHTGH*IRSCWQ
Trigger: TTGCCAGCAAGAGCGAATGCAGTGCCCAGTGTGGTT...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTCTTCCCGTCCATCCTaGTGTATTTGGCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINSSRPS*CIWHSG
Trigger: TCCACTGTGCCAAATACAGCAGGATGGACGGGAAGA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGCCATCCACCTGTGCTaGACTCTCCTGAGCATTTCT +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLAIHLC*TLLSIS
Trigger: AGAAATGCTCAGGAGAGTGCAGCACAGGTGGATGGC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCAGCGCCATCCACCTGTaGTGCACTCTCCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGSAIHL*CTLLSI
Trigger: AATGCTCAGGAGAGTGCAGCACAGGTGGATGGCGCT...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTTGGGCCAGTACTCCATaGAGCATCTTGTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSWASTP*SILWTS
Trigger: GCTTGTCCACAAGATGCTGCATGGAGTACTGGCCCA...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCTCACTCTCTCTGGCTaGTTTGTGTGTCCCGATCTG +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSLTLSG*FVCPDL
Trigger: CAGATCGGGACACACAAAGCAGCCAGAGAGAGTGAG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGTCTGCTGTAGGAGCTaGACTCACTCTCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGVCCRS*THSLWL
Trigger: CAGCCAGAGAGAGTGAGTGCAGCTCCTACAGCAGAC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATTGTTGCCACTGCTCTaGCCTCCAAGTGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSLLPLL*PPSVER
Trigger: CCTCTCTACACTTGGAGGGCAGAGCAGTGGCAACAA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCTGAGTCACAGTGTGTaGTGTGCACCTCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINLSHSV*CAPHFG
Trigger: ACCAAAGTGAGGTGCACAGCACACACTGTGACTCAG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGCGGTATAAATCTCACTaGAGGAGACCAGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRRYKSH*RRPAFA
Trigger: GGCAAAGGCTGGTCTCCTGCAGTGAGATTTATACCG...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCCTCCCTTTTGGACATaGAGACAACAAAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAPPFWT*RQQSLH
Trigger: ATGGAGACTTTGTTGTCTCCATGTCCAAAAGGGAGG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGTCCTGGGTGTCGGTTaGCCTAGTTGCTGCGTTACA +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLVLGVG*PSCCVT
Trigger: TGTAACGCAGCAACTAGGCCAACCGACACCCAGGAC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTGTGCATTTCTCCTTaGTTCCAGAGCCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLCISP*FQSQYG
Trigger: TCCATACTGGCTCTGGAACCAAGGAGAAATGCACAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGCTCGGGGATGTAATCTaGGTCACACTCACTTCGATC +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRLGDVI*VTLTSI
Trigger: GATCGAAGTGAGTGTGACCCAGATTACATCCCCGAG...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCTCCACCACACAGCTTaGTACACTCTCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFILHHTA*YTLPSC
Trigger: GCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAG...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGATGCACTCACTCTCTCTaGCTGCTTTGTGTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGCTHSL*LLCVSR
Trigger: TCGGGACACACAAAGCAGCCAGAGAGAGTGAGTGCA...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTGCACTCACTCTCTCTaGCTGCTTTGTGTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLCTHSL*LLCVSR
Trigger: TCGGGACACACAAAGCAGCCAGAGAGAGTGAGTGCA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCTGGGCAGTTCACTGTaGTTTGGTAGCTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKALGSSL*FGSCIH
Trigger: ATGAATACAGCTACCAAACCACAGTGAACTGCCCAG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGCCCCTGTGGACATTTaGCAGCACTGTAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIAPVDI*QHCSSP
Trigger: GGGACTGCTACAGTGCTGCCAAATGTCCACAGGGGC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGCTCGGACTTGGTATTaGCATGGCCTTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINARTWY*HGLCRN
Trigger: GTTTCTACAAAGGCCATGTCAATACCAAGTCCGAGC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCACTGCAGTGGTTCAATaGAATAATCTCCATCGTGAG +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKATAVVQ*NNLHRE
Trigger: CTCACGATGGAGATTATTTCATTGAACCACTGCAGT...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACCTCAATGGGAATATTaGATGAGTACCGCACATCTG +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGPQWEY*MSTAHL
Trigger: CAGATGTGCGGTACTCATTCAATATTCCCATTGAGG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTCAGAAACGGTTAGCTaGTCAGACTCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSETVS*SDSLVQ
Trigger: TTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCTCCATCCACATTATTaGACCAGAGCCGTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSLHPHY*TRAVCT
Trigger: AGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGAGGTGTTGACACAAATTaGTCTTCTTCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGGVDTN*SSSLGT
Trigger: GGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACC...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACACTACTTGTCGGGTTaGCTTACCTTGCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGHYLSG*LTLPTS
Trigger: ACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACCAGTCTTGTCCGCATaGCTCCACCACACAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKPVLSA*LHHTAW
Trigger: CCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACGGTATAAATCTCACTaGAGGAGACCAGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGRYKSH*RRPAFA
Trigger: GGCAAAGGCTGGTCTCCTGCAGTGAGATTTATACCG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGGGAGCGTTAGCAGTGTaGCCCAGGATACTAACTGCA +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVGALAV*PRILTA
Trigger: TGCAGTTAGTATCCTGGGCCACACTGCTAACGCTCC...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTATAAAACCATCCTGTaGTCAGCCACCACCATCACC +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINYKTIL*SATTIT
Trigger: GGTGATGGTGGTGGCTGACCACAGGATGGTTTTATA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGAGCAGGTCCCAAAGTaGCTCCAACCTCCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKEQVPK*LQPPQD
Trigger: ATCCTGGGGAGGTTGGAGCCACTTTGGGACCTGCTC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTCTCCTGTTTTCCAATaGGGACAGGAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFSPVFQ*GQENSL
Trigger: CAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGA...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTTTCACTGCCCTTAGCTaGTATCCCTGTCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSFTALS*YPCPQV
Trigger: CACTTGTGGACAGGGATACCAGCTAAGGGCAGTGAA...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGACCCAAATCGCCACTaGGTTCTCGGTATACTCTGT +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLDPNRH*VLGILC
Trigger: ACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGTGTCACATACTCCTTaGGATAGTCAGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAVSHTP*DSQNSS
Trigger: GGATGAATTCTGACTATCCCAAGGAGTATGTGACAC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTACCCAAGTAGTTCTTTaGGTGCTGCCACTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLTQVVL*VLPLAK
Trigger: TTTTGCCAGTGGCAGCACTCAAAGAACTACTTGGGT...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCATCATTGCGGGTGTTaGCACAAATTGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINHHCGC*HKLLFF
Trigger: GAAGAAGAGCAATTTGTGTCAACACCCGCAATGATG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTCTAATAATTTCACTTaGCTCGGGTGCAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSNNFT*LGCSLS
Trigger: GGACAGGCTGCACCCGAGGCAAGTGAAATTATTAGA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGCGTGTGCTGAGTCCTaGAGCCTTTGTGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKACAES*SLCVLH
Trigger: ATGGAGCACACAAAGGCTGCAGGACTCAGCACACGC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTGTAGGCTGTGTTTCCTaGCACTCTGCAGAACAACTT +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSVGCVS*HSAEQL
Trigger: AAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTAC...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTCTTCCCGTCCATCCTaGTGTATTTGGCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGSSRPS*CIWHSG
Trigger: TCCACTGTGCCAAATACAGCAGGATGGACGGGAAGA...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGGTTGGCCTAGTTGCTaGGTTACAGTCATTGTCATC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLGWPSC*VTVIVI
Trigger: GATGACAATGACTGTAACGCAGCAACTAGGCCAACC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGCATGTGTGTTGCACTaGTCACGGTCAGTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGACVLH*SRSVGL
Trigger: CAAACCTACTGACCGTGAGCAGTGCAACACACATGC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGATGTGGCTTAGGAAGGTaGTTACAGTTATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGCGLGR*LQLSLS
Trigger: AGAGAGTGATAACTGTAAGCACCTTCCTAAGCCACA...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCCCACATGCCTCTGCTaGACGCCTTGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYPTCLC*TPWPQD
Trigger: GTCCTGTGGCCAAGGCGTGCAGCAGAGGCATGTGGG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGTTAAATAGAAACTGCTaGCCGAAGGCTGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVLNRNC*PKAERR
Trigger: CCGCCTCTCAGCCTTCGGCCAGCAGTTTCTATTTAA...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACCCATCCTGCTGTATTTaGCACAGTGGATGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINPSCCI*HSGCLK
Trigger: CTTTAGACATCCACTGTGCCAAATACAGCAGGATGG...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGCCTGGTTACTCGGTCTaGGTTGACTGCTACAGAAAC +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVPGYSV*VDCYRN
Trigger: GTTTCTGTAGCAGTCAACCCAGACCGAGTAACCAGG...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCACTGCCCTTAGCTaGTATCCCTGTCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGFTALS*YPCPQV
Trigger: CACTTGTGGACAGGGATACCAGCTAAGGGCAGTGAA...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGACCCAAATCGCCACTaGGTTCTCGGTATACTCTGT +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLDPNRH*VLGILC
Trigger: ACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTCTCGGGGATGTAATCTaGGTCACACTCACTTCGATC +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLLGDVI*VTLTSI
Trigger: GATCGAAGTGAGTGTGACCCAGATTACATCCCCGAG...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGTTCACAACTCAAGTCTaGGAATCGGTCACCGTTGGC +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVFTTQV*ESVTVG
Trigger: GCCAACGGTGACCGATTCCCAGACTTGAGTTGTGAA...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCTGTGCACCTCACTTTaGTCCTCTGCTACGCATACC +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFILCTSL*SSATHT
Trigger: GGTATGCGTAGCAGAGGACCAAAGTGAGGTGCACAG...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGGCTTTTCTTTCTTCTaGCTTCGTATCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLGFSFF*LRISGA
Trigger: TGCCCCACTGATACGAAGCCAGAAGAAAGAAAAGCC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGATAGGGACATTCTGTTaGGTTGTGCAATCTGTGACC +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRIGTFC*VVQSVT
Trigger: GGTCACAGATTGCACAACCCAACAGAATGTCCCTAT...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp ACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTaGGAGGATATCGTGACAAAACAGCAGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TCGRSFVLLLIN*EDIVTKQQESL
Trigger: GAGGCTCTCCTGCTGTTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATTCGCCGCCTTCTTTTaGAGTGCACGTTCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKFAAFF*SARSWE
Trigger: TTCCCACGAACGTGCACTTCAAAAGAAGGCGGCGAA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTATTGCTGTCATCGTaGGGCATATTAAACACATGG +
Preference number: 4 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLLLSS*GILNTW
Trigger: CCATGTGTTTAATATGCCTCACGATGACAGCAATAA...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCTCAGAAACGGTTAGCTaGTCAGACTCCCTGGTGCAA +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFISETVS*SDSLVQ
Trigger: TTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGA...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTGGAGGCCGCTGGTCTaGGTCACAGTGTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYWRPLV*VTVCAV
Trigger: CACAGCACACACTGTGACTCAGACCAGCGGCCTCCA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACTTTCCACAGGTCACTaGGCACTCAGACCATTCTCC +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKLSTGH*ALRPFS
Trigger: GGAGAATGGTCTGAGTGCTCAGTGACCTGTGGAAAG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAAGATTAAATAGAAACTaGTGGCCGAAGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSRLNRN*WPKAER
Trigger: CCTCTCAGCCTTCGGCCAGCAGTTTCTATTTAATCT...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGCCTGCAGCCTTTGTGTaGTCCATCCACATTATTGCA +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVPAAFV*SIHIIA
Trigger: TGCAATAATGTGGATGGAGCACACAAAGGCTGCAGG...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTCTCTGCAGAACAACTTaGACCGGTCCTTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLLCRTT*TGPSSK
Trigger: TTTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAG...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGGTGTTGACACAAATTaGTCTTCTTCTCTGGGTACC +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLGVDTN*SSSLGT
Trigger: GGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCTTTCTCCTGGTGTGTaGATTTGCTGTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGLSPGV*ICCHPG
Trigger: TCCTGGATGACAGCAAATGCACACACCAGGAGAAAG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATGGGCCAGTACTCCATaGAGCATCTTGTGGACAAGC +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKWASTP*SILWTS
Trigger: GCTTGTCCACAAGATGCTGCATGGAGTACTGGCCCA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATTGTTGCCACTGCTCTaGCCTCCAAGTGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKLLPLL*PPSVER
Trigger: CCTCTCTACACTTGGAGGGCAGAGCAGTGGCAACAA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCACAGTTATAAACATTaGGGCAGGCTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAHSYKH*GRLFFL
Trigger: AAGAAAGAAAAGCCTGCCGCAATGTTTATAACTGTG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCACCTCTACAAACCGTaGGTAGGACAGAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGHLYKP*VGQKAF
Trigger: AAACGCTTTCTGTCCTACCCACGGTTTGTAGAGGTG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGCTGATCAGACTCCCTaGTGCAAACAAGTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLADQTP*CKQVFV
Trigger: GACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGATCTCCTGTTTTCCAATaGGGACAGGAGAACTCATTG +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGSPVFQ*GQENSL
Trigger: CAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGA...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGCCAGTATGGAAGGGTaGCAAGATGCTAATTCACAG +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLASMEG*QDANSQ
Trigger: CTGTGAATTAGCATCTTGCCACCCTTCCATACTGGC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTTCAGTGGGGCATAAGTaGCTGGGTTGGTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLSVGHK*LGWSSL
Trigger: TAATGAAGACCAACCCAGCCACTTATGCCCCACTGA...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGTCAGTGGGGCATAAGTaGCTGGGTTGGTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVSVGHK*LGWSSL
Trigger: TAATGAAGACCAACCCAGCCACTTATGCCCCACTGA...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGGCTTTTCTTTCTTCTaGCTTCGTATCAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLGFSFF*LRISGA
Trigger: TGCCCCACTGATACGAAGCCAGAAGAAAGAAAAGCC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAGGATTTTCTGGAAACTaGAAAAGCCAGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGGFSGN*KSQQLC
Trigger: ACACAGCTGCTGGCTTTTCCAGTTTCCAGAAAATCC...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGATCGAGTCGGATTTTCTaGAAACTGGAAAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGSSRIF*KLEKPA
Trigger: TGCTGGCTTTTCCAGTTTCCAGAAAATCCGACTCGA...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp ACGCACACAGATGCACCCAAATTCAAGGTGGAGGTATaGAATTACTATCCTTCATCCGTCTCCTATGGCTTC +
Preference number: 4 (lower is better)
Translates to: THTDAPKFKVEV*NYYPSSVSYGF
Trigger: GAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp CTCAGGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTaGTGTGTCTCCTTTCTGTTTCTTAGGAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: LRKRASHAQECG*CVSFLFLRKLY
Trigger: GTAAAGTTTCCTAAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTGCCACTGTTTTGCATaGAGAATTATCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLCHCFA*RIISTT
Trigger: TGTGGTGGAGATAATTCTTCATGCAAAACAGTGGCA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACATATAAGTCCCCATaGTGCACTTCACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVTYKSP*CTSLPL
Trigger: TAAGGGCAGTGAAGTGCATCATGGGGACTTATATGT...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTTGTGTGTCCCGATCTaGCAGCCCACATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYLCVPI*QPTCLC
Trigger: GCAGAGGCATGTGGGCTGTCAGATCGGGACACACAA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACGAGGTGGCACAGGCATaGTTTCCTGTGGAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYEVAQA*FPVEGS
Trigger: GGAACCCTCCACAGGAAAGCATGCCTGTGCCACCTC...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATGTTTCCTGCCACTCTaGAGAACAACTTGCACCGGT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKCFLPL*RTTCTG
Trigger: ACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGTAGGCTGTGTTTCCTaGCACTCTGCAGAACAACTT +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIVGCVS*HSAEQL
Trigger: AAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTAC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGTTCCTGCCACTGTTTTaGATGAAGAATTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRFLPLF*MKNYLH
Trigger: GTGGAGATAATTCTTCATGCAAAACAGTGGCAGGAA...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGATCAGACTCCCTGGTaGAAACAAGTTTTCGTCTCC +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIDQTPW*KQVFVS
Trigger: GGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCTTTCTCCTGGTGTGTaGATTTGCTGTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFILSPGV*ICCHPG
Trigger: TCCTGGATGACAGCAAATGCACACACCAGGAGAAAG...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACACTACTTGTCGGGTTaGCTTACCTTGCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKHYLSG*LTLPTS
Trigger: ACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAACATTTCGATGTTTATaGCCTCGACCACAAGAGACA +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSTFRCL*PRPQET
Trigger: TGTCTCTTGTGGTCGAGGGCATAAACATCGAAATGT...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGCGATAAATCCGGTATaGGCGGTGAGATTAAATAGA +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLAINPV*AVRLNR
Trigger: TCTATTTAATCTCACCGCCCATACCGGATTTATCGC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGGTGACAGTGAACAGTaGAGCGATAAATCCGGTATG +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIGDSEQ*SDKSGM
Trigger: CATACCGGATTTATCGCTCCACTGTTCACTGTCACC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGCTGATCAGACTCCCTaGTGCAAACAAGTTTTCGTC +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIADQTP*CKQVFV
Trigger: GACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCTGTGCATTTCTCCTTaGTTCCAGAGCCAGTATGGA +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFILCISP*FQSQYG
Trigger: TCCATACTGGCTCTGGAACCAAGGAGAAATGCACAG...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCTCCACCACACAGCTTaGTACACTCTCCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYLHHTA*YTLPSC
Trigger: GCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGTGTCACATACTCCTTaGGATAGTCAGAATTCATCC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSVSHTP*DSQNSS
Trigger: GGATGAATTCTGACTATCCCAAGGAGTATGTGACAC...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTCGAGTCGGATTTTCTaGAAACTGGAAAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGSSRIF*KLEKPA
Trigger: TGCTGGCTTTTCCAGTTTCCAGAAAATCCGACTCGA...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTGCCACTGTTTTGCATaGAGAATTATCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGCHCFA*RIISTT
Trigger: TGTGGTGGAGATAATTCTTCATGCAAAACAGTGGCA...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCATTGTCATCGACCACTaGCATATAAGTCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGIVIDH*HISPHD
Trigger: ATCATGGGGACTTATATGTCAGTGGTCGATGACAAT...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCAGACCATTCTCCTGTaGTCCACACGTACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYQTILL*STRTRR
Trigger: CCTGCGAGTACGTGTGGATCACAGGAGAATGGTCTG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTGCACCAGAGCCGTCTaGACTGCATCATATAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYCTRAV*TASYRG
Trigger: GCCCCTATATGATGCAGTGCAGACGGCTCTGGTGCA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATTCCTGCCACTGTTTTaGATGAAGAATTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSFLPLF*MKNYLH
Trigger: GTGGAGATAATTCTTCATGCAAAACAGTGGCAGGAA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTATGGCTTCCATCTTTTaGCAAGCAGTAAACATTTCG +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSMASIF*QAVNIS
Trigger: CGAAATGTTTACTGCTTGGCAAAAGATGGAAGCCAT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTCTCTACACAGTCATTaGCTGTGTATCCGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSLHSH*LCIRFH
Trigger: ATGAAAACGGATACACAGCCAATGACTGTGTAGAGA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCGGATTTTCTGGAAACTaGAAAAGCCAGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AHRCTQIQGGGIELLSFIGFSGN*KSQQLC
Trigger: ACACAGCTGCTGGCTTTTCCAGTTTCCAGAAAATCC...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp GGTGTTCCGCAGGTTGAGTATCCCTCATTGAAATGCTaGAGACCATCAGTGTGTATTTCAGACATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVPQVEYPSLKC*RPSVCISDILK
Trigger: CTTCAAAATGTCTGAAATACACACTGATGGTCTCAAGCATTTCAATGAGGGATACTCAACCTGCGGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCCTTCCTGTTCATTATaGATCACAACTAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSPSCSL*ITTKFT
Trigger: TGTGAACTTAGTTGTGATTCATAATGAACAGGAAGG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATGTCTAGGAACTCAGTaGTGTATTTCCGACTGCACT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKCLGTQ*CISDCT
Trigger: AGTGCAGTCGGAAATACATCACTGAGTTCCTAGACA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACCTCAATGGGAATATTaGATGAGTACCGCACATCTG +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKPQWEY*MSTAHL
Trigger: CAGATGTGCGGTACTCATTCAATATTCCCATTGAGG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACATCATTGCGGGTGTTaGCACAAATTGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKHHCGC*HKLLFF
Trigger: GAAGAAGAGCAATTTGTGTCAACACCCGCAATGATG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACACAAAATCCAAACTTaGAGTGCTTTCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKHKIQT*SAFQAH
Trigger: GTGAGCCTGGAAAGCACTGCAAGTTTGGATTTTGTG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACAACCACACTGGGCACTaGATTCGCTCTTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYNHTGH*IRSCWQ
Trigger: TTGCCAGCAAGAGCGAATGCAGTGCCCAGTGTGGTT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCATGGCTTCCATCTTTTaGCAAGCAGTAAACATTTCG +
Preference number: 4 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGMASIF*QAVNIS
Trigger: CGAAATGTTTACTGCTTGGCAAAAGATGGAAGCCAT...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAATTCATAATTCTCCTTaGCGGTATAAATCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSIHNSP*RYKSHC
Trigger: GCAGTGAGATTTATACCGGCAAGGAGAATTATGAAT...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTCACAGTTATAAACATTaGGGCAGGCTTTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QESKAPWSRVDHITNNNSHSYKH*GRLFFL
Trigger: AAGAAAGAAAAGCCTGCCGCAATGTTTATAACTGTG...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACGTTTGGTTCTTTTGTaGTTCCATCTGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKRLVLL*FHLSLV
Trigger: CACAAGGGACAGATGGAACCACAAAAGAACCAAACG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACGGTAGGGGTCGCAAATaGTTCCCAGTTCAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYGRGRK*FPVQQD
Trigger: GTCTTGCTGAACTGGGAACCATTTGCGACCCCTACC...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAACTGGGCAGTTCACTGTaGTTTGGTAGCTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKLGSSL*FGSCIH
Trigger: ATGAATACAGCTACCAAACCACAGTGAACTGCCCAG...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp CTAACTTACTCATTGGCTAATGAAACGTCCCCACAATaGCCAAAAATACCCTTATTCAACCCACATAGCACC +
Preference number: 4 (lower is better)
Translates to: LTYSLANETSPQ*PKIPLFNPHST
Trigger: GGTGCTATGTGGGTTGAATAAGGGTATTTTTGGCAATTGTGGGGACGTTTCATTAGCCAATGAGTAAGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp GGGAATACTGTCAGGGTTTTCCTAATCTCTTTGGTCTaGGAAAGCTTGGTCAGGCTTTCTCAAGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: GNTVRVFLISLV*ESLVRLSQVKC
Trigger: ACATTTTACTTGAGAAAGCCTGACCAAGCTTTCCAAGACCAAAGAGATTAGGAAAACCCTGACAGTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAACATTTCGATGTTTATaGCCTCGACCACAAGAGACA +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKTFRCL*PRPQET
Trigger: TGTCTCTTGTGGTCGAGGGCATAAACATCGAAATGT...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATGTGGCTTAGGAAGGTaGTTACAGTTATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKCGLGR*LQLSLS
Trigger: AGAGAGTGATAACTGTAAGCACCTTCCTAAGCCACA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCGCGGACCTCCCTTTTaGACATGGAGACAACAAAGT +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYRGPPF*TWRQQS
Trigger: ACTTTGTTGTCTCCATGTCCAAAAGGGAGGTCCGCG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACGGTTGGCCTAGTTGCTaGGTTACAGTCATTGTCATC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYGWPSC*VTVIVI
Trigger: GATGACAATGACTGTAACGCAGCAACTAGGCCAACC...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATCTCTACACAGTCATTaGCTGTGTATCCGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKSLHSH*LCIRFH
Trigger: ATGAAAACGGATACACAGCCAATGACTGTGTAGAGA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp CAGTTGGTACAACCTGTGATGTTGCTAACTTACTCATaGGCTAATGAAACGTCCCCACAATTGCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: QLVQPVMLLTYS*ANETSPQLPKI
Trigger: TATTTTTGGCAATTGTGGGGACGTTTCATTAGCCAATGAGTAAGTTAGCAACATCACAGGTTGTACCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
3UTR CAA 72 bp AAAGACTATGATGAACAGTTGGTACAACCTGTGATGTaGCTAACTTACTCATTGGCTAATGAAACGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KDYDEQLVQPVM*LTYSLANETSP
Trigger: TGGGGACGTTTCATTAGCCAATGAGTAAGTTAGCAACATCACAGGTTGTACCAACTGTTCATCATAGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR TCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACACATATAAGTCCCCATaGTGCACTTCACTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYTYKSP*CTSLPL
Trigger: TAAGGGCAGTGAAGTGCATCATGGGGACTTATATGT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR GCA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAATTCATAATTCTCCTTaGCGGTATAAATCTCACTGC +
Preference number: 4 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKIHNSP*RYKSHC
Trigger: GCAGTGAGATTTATACCGGCAAGGAGAATTATGAAT...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACATAGGGACATTCTGTTaGGTTGTGCAATCTGTGACC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYIGTFC*VVQSVT
Trigger: GGTCACAGATTGCACAACCCAACAGAATGTCCCTAT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACGGCCCTCCATTTCTTTaGGAACACAAAATCCAAACT +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYGPPFL*EHKIQT
Trigger: AGTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCC...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
3UTR CAA 72 bp GATCACATGAAACGGAATAAAGACTATGATGAACAGTaGGTACAACCTGTGATGTTGCTAACTTACTCATTG +
Preference number: 4 (lower is better)
Translates to: DHMKRNKDYDEQ*VQPVMLLTYSL
Trigger: CAATGAGTAAGTTAGCAACATCACAGGTTGTACCAACTGTTCATCATAGTCTTTATTCCGTTTCATGTGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CCA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACATCCACAGACTGCAGTaGTTCAATGAAATAATCTCC +
Preference number: 4 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYIHRLQ*FNEIIS
Trigger: GGAGATTATTTCATTGAACCACTGCAGTCTGTGGAT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 90 bp CACTGTCCCCAGGGACCCGCCTGCCAAGCTGCACACTCTGGCTGCTaGCACGTCTGCATGGGCTCCGGCTTGGCCTCAGGGTCACACATT +
Preference number: 5 (lower is better)
Translates to: HCPQGPACQAAHSGC*HVCMGSGLASGSHI
Trigger: AATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGCAGACGTGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTGGGGACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TCCACAAGTGACACTGCACTGTCCCCAGGGACCCGCCTGCCAAGCTaGACACTCTGGCTGCTGACACGTCTGCATGGGCTCCGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: STSDTALSPGTRLPS*TLWLLTRLHGLRLG
Trigger: GCCAAGCCGGAGCCCATGCAGACGTGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTGGGGACAGTGCAGTGTCACTTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp AGGTGGCCGAGACAGGACAGTCCCTCAAGTAGCAGGGATGGACGCTaGGCGGCTGGGCGCCTGGGCAGTTCACTGTGGTTTGGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: RWPRQDSPSSSRDGR*AAGRLGSSLWFGSC
Trigger: ACAGCTACCAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCCAGCGTCCATCCCTGCTACTTGAGGGACTGTCCTGTCTCGGCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp GCTGACAGACCACCAGTCTTGTCCGCATGCCTCCACCACACAGCTTaGTACACTCTCCCCAGCTGCCGTAAGCCCATTGGGGACACGGGC +
Preference number: 5 (lower is better)
Translates to: ADRPPVLSACLHHTA*YTLPSCRKPIGDTG
Trigger: GCCCGTGTCCCCAATGGGCTTACGGCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TGCCGCAGGACACTGAGCAACTGCCCCAGTTGCCAACTCTCCAGGTaGCCGAGACAGGACAGTCCCTCAAGTAGCAGGGATGGACGCTGG +
Preference number: 5 (lower is better)
Translates to: CRRTLSNCPSCQLSR*PRQDSPSSSRDGRW
Trigger: CCAGCGTCCATCCCTGCTACTTGAGGGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTCAGTGTCCTGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp ATCGGTCACCGTTGGCCCGCTGACAGACCACCAGTCTTGTCCGCATaGCTCCACCACACAGCTTGGTACACTCTCCCCAGCTGCCGTAAG +
Preference number: 5 (lower is better)
Translates to: IGHRWPADRPPVLSA*LHHTAWYTLPSCRK
Trigger: CTTACGGCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TACTCGCAGGGCTGTAGGCTGCAGCTCTCACGGTCTGGAGGCCGCTaGTCTGAGTCACAGTGTGTGCTGTGCACCTCACTTTGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: YSQGCRLQLSRSGGR*SESQCVLCTSLWSS
Trigger: AGAGGACCAAAGTGAGGTGCACAGCACACACTGTGACTCAGACCAGCGGCCTCCAGACCGTGAGAGCTGCAGCCTACAGCCCTGCGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp CACAGGCACTCTCATCAGCCACAGAGCCGTCCTCGTCCCGGCAGCTaGCGTATCTCATCCGGGTACCTTTTCCACAAGTGGCTGAGCATG +
Preference number: 5 (lower is better)
Translates to: HRHSHQPQSRPRPGS*RISSGYLFHKWLSM
Trigger: CATGCTCAGCCACTTGTGGAAAAGGTACCCGGATGAGATACGTCAGCTGCCGGGACGAGGACGGCTCTGTGGCTGATGAGAGTGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TCAGACTCTCTAATAATTTCACTTGCCTCGGGTGCAGCCTGTCCTTaGGCACGGCCGCCGCGGAGTCAGGGCTCCTCATCTCAACCAGGT +
Preference number: 5 (lower is better)
Translates to: SDSLIISLASGAACP*ARPPRSQGSSSQPG
Trigger: ACCTGGTTGAGATGAGGAGCCCTGACTCCGCGGCGGCCGTGCGCAAGGACAGGCTGCACCCGAGGCAAGTGAAATTATTAGAGAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 90 bp CAGGCTCACACTCGGTTCCATCTGCCCAGGGCGTGTGCTGAGTCCTaGAGCCTTTGTGTGCTCCATCCACATTATTGCACCAGAGCCGTC +
Preference number: 5 (lower is better)
Translates to: QAHTRFHLPRACAES*SLCVLHPHYCTRAV
Trigger: GACGGCTCTGGTGCAATAATGTGGATGGAGCACACAAAGGCTGCAGGACTCAGCACACGCCCTGGGCAGATGGAACCGAGTGTGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp CACGCTCCGACTCTGGTCTGCTGTAGGAGCTGCACTCACTCTCTCTaGCTGCTTTGTGTGTCCCGATCTGACAGCCCACATGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: HAPTLVCCRSCTHSL*LLCVSRSDSPHASA
Trigger: AGCAGAGGCATGTGGGCTGTCAGATCGGGACACACAAAGCAGCCAGAGAGAGTGAGTGCAGCTCCTACAGCAGACCAGAGTCGGAGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGGTGCAGCCTGTCCTaGCGCACGGCCGCCGCGGAG +
Preference number: 5 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSGCSLS*RTAAAE
Trigger: CTCCGCGGCGGCCGTGCGCAAGGACAGGCTGCACCC...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 90 bp TGGCAACGTGCCACCTCAAGTCACAGTCTGTGCCGCACGCTTCAGTaGCAGGTCCTGGCTGGGGCAGCCGGTCACATCTTTGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: WQRATSSHSLCRTLQ*QVLAGAAGHIFDQK
Trigger: TTTCTGATCAAAGATGTGACCGGCTGCCCCAGCCAGGACCTGTCACTGAAGCGTGCGGCACAGACTGTGACTTGAGGTGGCACGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp AGGACTTCACAACTCAAGTCTGGGAATCGGTCACCGTTGGCCCGCTaGCAGACCACCAGTCTTGTCCGCATGCCTCCACCACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: RTSQLKSGNRSPLAR*QTTSLVRMPPPHSL
Trigger: CAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCCCAGACTTGAGTTGTGAAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TGTGTGCTGTGCACCTCACTTTGGTCCTCTGCTACGCATACCACCTaGCGGTACCGGGAGCCTTCGCCACACGTCTTGGTACATTGTTGC +
Preference number: 5 (lower is better)
Translates to: CVLCTSLWSSATHTT*RYREPSPHVLVHCC
Trigger: GCAACAATGTACCAAGACGTGTGGCGAAGGCTCCCGGTACCGGCAGGTGGTATGCGTAGCAGAGGACCAAAGTGAGGTGCACAGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp GTTTGTCCAGGACTTCACAACTCAAGTCTGGGAATCGGTCACCGTTaGCCCGCTGACAGACCACCAGTCTTGTCCGCATGCCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: VCPGLHNSSLGIGHR*PADRPPVLSACLHH
Trigger: GTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCCCAGACTTGAGTTGTGAAGTCCTGGACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp ACATTGTTGCCACTGCTCTGCCCTCCAAGTGTAGAGAGGACATGGTaGGGCTTGGCAGACACGCTCCGACTCTGGTCTGCTGTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: TLLPLLCPPSVERTW*GLADTLRLWSAVGA
Trigger: AGCTCCTACAGCAGACCAGAGTCGGAGCGTGTCTGCCAAGCCTCACCATGTCCTCTCTACACTTGGAGGGCAGAGCAGTGGCAACAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp GGTTCCATCTGCCCAGGGCGTGTGCTGAGTCCTGCAGCCTTTGTGTaGTCCATCCACATTATTGCACCAGAGCCGTCTGCACTGCATCAT +
Preference number: 5 (lower is better)
Translates to: GSICPGRVLSPAAFV*SIHIIAPEPSALHH
Trigger: ATGATGCAGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGCACACAAAGGCTGCAGGACTCAGCACACGCCCTGGGCAGATGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 90 bp GCGCCAGCCTTCCATCTGGGGCACCGTCCTCCTCGGCACCTTCTGTaGCCATGTGGCTTAGGAAGGTGCTTACAGTTATCACTCTCTAAA +
Preference number: 5 (lower is better)
Translates to: APAFHLGHRPPRHLL*PCGLGRCLQLSLSK
Trigger: TTTAGAGAGTGATAACTGTAAGCACCTTCCTAAGCCACATGGGCACAGAAGGTGCCGAGGAGGACGGTGCCCCAGATGGAAGGCTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp CTCGTTTTGAAATGGGTGAGCCAAGCCAGTCCATTGAGGGCACGGTaGCATGGAGCAGTCCTGGTCAGTCTCGGGGATGTAATCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LVLKWVSQASPLRAR*HGAVLVSLGDVIWV
Trigger: GACCCAGATTACATCCCCGAGACTGACCAGGACTGCTCCATGTCACCGTGCCCTCAATGGACTGGCTTGGCTCACCCATTTCAAAACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp GCTGTTTTGATGCCTCCTCCACACGTTCTTGAGCAGGTCCCAAAGTaGCTCCAACCTCCCCAGGATCCATCAATTGCAGGGCCCTCCATT +
Preference number: 5 (lower is better)
Translates to: AVLMPPPHVLEQVPK*LQPPQDPSIAGPSI
Trigger: AATGGAGGGCCCTGCAATTGATGGATCCTGGGGAGGTTGGAGCCACTTTGGGACCTGCTCAAGAACGTGTGGAGGAGGCATCAAAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp ACAGTCCCTCAAGTAGCAGGGATGGACGCTGGGCGGCTGGGCGCCTaGGCAGTTCACTGTGGTTTGGTAGCTGTATTCATAATTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TVPQVAGMDAGRLGA*AVHCGLVAVFIILL
Trigger: AAGGAGAATTATGAATACAGCTACCAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCCAGCGTCCATCCCTGCTACTTGAGGGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGAGAAGGCCGGGCAGTaGGGAAGGCAAAGGATAGGT +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKEKAGQ*GRQRIG
Trigger: ACCTATCCTTTGCCTTCCCAACTGCCCGGCCTTCTC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCCCTCCACCACACAGCTaGGTACACTCTCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAPPPHS*VHSPQL
Trigger: CAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGG...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp GTGCTGCACTCTCCTGAGCATTTCTCCTGGTTACTCGGTCTGGGTTaGCTGCTACAGAAACTGTCATCCACCTTCTCCGTCTTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: VLHSPEHFSWLLGLG*LLQKLSSTFSVFPS
Trigger: GGACGGGAAGACGGAGAAGGTGGATGACAGTTTCTGTAGCAGTCAACCCAGACCGAGTAACCAGGAGAAATGCTCAGGAGAGTGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp GCCTCAGGGTCACACATTCTATCGCTTAATCGATCTTCGCCAAACTaGCACCAGACCTGGCGGTGCTTATGCCCTTTCCCACAGGTGACC +
Preference number: 5 (lower is better)
Translates to: ASGSHILSLNRSSPN*HQTWRCLCPFPQVT
Trigger: GGTCACCTGTGGGAAAGGGCATAAGCACCGCCAGGTCTGGTGTCAGTTTGGCGAAGATCGATTAAGCGATAGAATGTGTGACCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp GCGTGTGCTGAGTCCTGCAGCCTTTGTGTGCTCCATCCACATTATTaGACCAGAGCCGTCTGCACTGCATCATATAGGGGCACACTTGAG +
Preference number: 5 (lower is better)
Translates to: ACAESCSLCVLHPHY*TRAVCTASYRGTLE
Trigger: CTCAAGTGTGCCCCTATATGATGCAGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGCACACAAAGGCTGCAGGACTCAGCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 90 bp CACAGTGGATGTCTAAAGTACGGTAGCCCAAACCACACTGGGCACTaGATTCGCTCTTGCTGGCAACGTGCCACCTCAAGTCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: HSGCLKYGSPNHTGH*IRSCWQRATSSHSL
Trigger: CAGACTGTGACTTGAGGTGGCACGTTGCCAGCAAGAGCGAATGCAGTGCCCAGTGTGGTTTGGGCTACCGTACTTTAGACATCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp GCCGGTCACATCTTTGATCAGAAACGGTTAGCTGATCAGACTCCCTaGTGCAAACAAGTTTTCGTCTCCGCTCCCCTTGGCAGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AGHIFDQKRLADQTP*CKQVFVSAPLGRAC
Trigger: GCAAGCCCTGCCAAGGGGAGCGGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGATCAAAGATGTGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TTTGAAATGGGTGAGCCAAGCCAGTCCATTGAGGGCACGGTGACATaGAGCAGTCCTGGTCAGTCTCGGGGATGTAATCTGGGTCACACT +
Preference number: 5 (lower is better)
Translates to: FEMGEPSQSIEGTVT*SSPGQSRGCNLGHT
Trigger: AGTGTGACCCAGATTACATCCCCGAGACTGACCAGGACTGCTCCATGTCACCGTGCCCTCAATGGACTGGCTTGGCTCACCCATTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGATCCCCTTGGCAGGGCTaGCTGCATGCTTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGSPWQG*LHACHG
Trigger: GCCGTGGCAAGCATGCAGCAAGCCCTGCCAAGGGGA...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp GGTCACATCTTTGATCAGAAACGGTTAGCTGATCAGACTCCCTGGTaGAAACAAGTTTTCGTCTCCGCTCCCCTTGGCAGGGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: GHIFDQKRLADQTPW*KQVFVSAPLGRACC
Trigger: GCAGCAAGCCCTGCCAAGGGGAGCGGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGATCAAAGATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TGCACTCTCCTGAGCATTTCTCCTGGTTACTCGGTCTGGGTTGACTaGTACAGAAACTGTCATCCACCTTCTCCGTCTTCCCGTCCATCC +
Preference number: 5 (lower is better)
Translates to: CTLLSISPGYSVWVD*YRNCHPPSPSSRPS
Trigger: GGATGGACGGGAAGACGGAGAAGGTGGATGACAGTTTCTGTAGCAGTCAACCCAGACCGAGTAACCAGGAGAAATGCTCAGGAGAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGCAGTGTGCTCGGACTaGGTATTGACATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKAVCSD*VLTWPL
Trigger: CAAAGGCCATGTCAATACCAAGTCCGAGCACACTGC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGGTTCCATCTGTCCCTaGTGCTGTTTGTCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKGSICP*CCLSGC
Trigger: GCAACCAGACAAACAGCACAAGGGACAGATGGAACC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAACACTACTTGTCGGGTaGCCTTACCTTGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKTLLVG*PYLAHK
Trigger: CTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGT...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGACAGACCACCAGTCTaGTCCGCATGCCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINDRPPV*SACLHH
Trigger: GTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGAGAGCAACTGCCCCAGTaGCCAACTCTCCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGEQLPQ*PTLQVA
Trigger: GGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTC...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTGAGCAACTGCCCCAGTaGCCAACTCTCCAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSEQLPQ*PTLQVA
Trigger: GGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTC...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp ACGCTGGGCAGCAGACCATTGATGTTGAAGTGTTTGCCATCAAAGTaGGCACACTGCTCCTCTCGGAAGTCTCGCTTCTGCTTCATGCAG +
Preference number: 5 (lower is better)
Translates to: TLGSRPLMLKCLPSK*AHCSSRKSRFCFMQ
Trigger: CTGCATGAAGCAGAAGCGAGACTTCCGAGAGGAGCAGTGTGCTCACTTTGATGGCAAACACTTCAACATCAATGGTCTGCTGCCCAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TGCAGCCTTTGTGTGCTCCATCCACATTATTGCACCAGAGCCGTCTaGACTGCATCATATAGGGGCACACTTGAGAGCCTGGCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: CSLCVLHPHYCTRAV*TASYRGTLESLAQK
Trigger: TTTTTGGGCCAGGCTCTCAAGTGTGCCCCTATATGATGCAGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGCACACAAAGGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 90 bp TGGAGTCCAAGACCCAAATCGCCACTGGGTTCTCGGTATACTCTGTaGATTTCTCCTTGGTTCCAGAGCCAGTATGGAAGGGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: WSPRPKSPLGSRYTL*ISPWFQSQYGRVAR
Trigger: TCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTCTTGGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp AGTGCACGTTCGTGGGAAAGGGTTCCCCGAGGGGGTTCACTCGGATaGGAGACGCGATCTCATATTCGCTCAGACTCTCTAATAATTTCA +
Preference number: 5 (lower is better)
Translates to: SARSWERVPRGGSLG*ETRSHIRSDSLIIS
Trigger: TGAAATTATTAGAGAGTCTGAGCGAATATGAGATCGCGTCTCCCATCCGAGTGAACCCCCTCGGGGAACCCTTTCCCACGAACGTGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp TCTCCAAGGAGGGTGACAGTGAACAGTGGAGCGATAAATCCGGTATaGGCGGTGAGATTAAATAGAAACTGCTGGCCGAAGGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SPRRVTVNSGAINPV*AVRLNRNCWPKAER
Trigger: CCTCTCAGCCTTCGGCCAGCAGTTTCTATTTAATCTCACCGCCCATACCGGATTTATCGCTCCACTGTTCACTGTCACCCTCCTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp TTTCCACAAGTGGCTGAGCATGGAGTCCAAGACCCAAATCGCCACTaGGTTCTCGGTATACTCTGTGCATTTCTCCTTGGTTCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FPQVAEHGVQDPNRH*VLGILCAFLLGSRA
Trigger: GGCTCTGGAACCAAGGAGAAATGCACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTCTTGGACTCCATGCTCAGCCACTTGTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTTCGCCGCCTTCTTTaGAAGTGCACGTTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLRRLL*KCTFVG
Trigger: TCCCACGAACGTGCACTTCAAAAGAAGGCGGCGAAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAATCTCTGATGGCTGTTTaGATGCCTCCTCCACACGTT +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKSLMAV*MPPPHV
Trigger: AACGTGTGGAGGAGGCATCAAAACAGCCATCAGAGA...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATGCATGGGCTCCGGCTaGGCCTCAGGGTCACACATT +
Preference number: 5 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSCMGSG*ASGSHI
Trigger: AATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGCA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTGACAGACCACCAGTCTaGTCCGCATGCCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSDRPPV*SACLHH
Trigger: GTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTC...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCGGACAAGCATGTGTGTaGCACTGCTCACGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: KRWSISCRSLSMLRGVKAGQACV*HCSRSV
Trigger: TACTGACCGTGAGCAGTGCAACACACATGCTTGTCC...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TCACTCTGTCTCGGAGCTGGTAGTAGGCTGTGTTTCCTGCCACTCTaGAGAACAACTTGCACCGGTCCTTCATCAAAATTCCGCTGTACT +
Preference number: 5 (lower is better)
Translates to: SLCLGAGSRLCFLPL*RTTCTGPSSKFRCT
Trigger: AGTACAGCGGAATTTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTACTACCAGCTCCGAGACAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TCCGTCAATCACTCTGTCTCGGAGCTGGTAGTAGGCTGTGTTTCCTaGCACTCTGCAGAACAACTTGCACCGGTCCTTCATCAAAATTCC +
Preference number: 5 (lower is better)
Translates to: SVNHSVSELVVGCVS*HSAEQLAPVLHQNS
Trigger: GGAATTTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTACTACCAGCTCCGAGACAGAGTGATTGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp AAGTTCCATTTCCTCCTCGGAATACAGCTTGGTCTGGTTTACCCCTaGCTCTCCAAGGAGGGTGACAGTGAACAGTGGAGCGATAAATCC +
Preference number: 5 (lower is better)
Translates to: KFHFLLGIQLGLVYP*LSKEGDSEQWSDKS
Trigger: GGATTTATCGCTCCACTGTTCACTGTCACCCTCCTTGGAGAGCCAGGGGTAAACCAGACCAAGCTGTATTCCGAGGAGGAAATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp AAACAGTGCCTAAGTTCCATTTCCTCCTCGGAATACAGCTTGGTCTaGTTTACCCCTGGCTCTCCAAGGAGGGTGACAGTGAACAGTGGA +
Preference number: 5 (lower is better)
Translates to: KQCLSSISSSEYSLV*FTPGSPRRVTVNSG
Trigger: TCCACTGTTCACTGTCACCCTCCTTGGAGAGCCAGGGGTAAACCAGACCAAGCTGTATTCCGAGGAGGAAATGGAACTTAGGCACTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp TGGGGACAGGAGAACTCATTGCAGCTCTGTACTACGACTTTCTCCTaGTGTGTGCATTTGCTGTCATCCAGGACATCATTGCGGGTGTTG +
Preference number: 5 (lower is better)
Translates to: WGQENSLQLCTTTFS*CVHLLSSRTSLRVL
Trigger: CAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGAGAAAGTCGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TTCCCACAGGTGACCAAGCACTCTGACCAGTCTCCTGTTTTCCAATaGGGACAGGAGAACTCATTGCAGCTCTGTACTACGACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FPQVTKHSDQSPVFQ*GQENSLQLCTTTFS
Trigger: GGAGAAAGTCGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGACTGGTCAGAGTGCTTGGTCACCTGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCCTCCACCACACAGCTaGGTACACTCTCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGPPPHS*VHSPQL
Trigger: CAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp GTTCCTCTTCATCCTCTTGCTCATCCACAGACTGCAGTGGTTCAATaGAATAATCTCCATCGTGAGAGCGGAACGTGCCCATCATTCCGG +
Preference number: 5 (lower is better)
Translates to: VPLHPLAHPQTAVVQ*NNLHRESGTCPSFR
Trigger: CCGGAATGATGGGCACGTTCCGCTCTCACGATGGAGATTATTTCATTGAACCACTGCAGTCTGTGGATGAGCAAGAGGATGAAGAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 90 bp CTAAGGTGTCACATTTGTCCTGAGCTCTGCAGATATCTTCCCTTGTaGCCAGAACGGCTGTGTCGTGCTGAATCCCACCCAAGTAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRCHICPELCRYLPL*PERLCRAESHPSSS
Trigger: AGAACTACTTGGGTGGGATTCAGCACGACACAGCCGTTCTGGTCACAAGGGAAGATATCTGCAGAGCTCAGGACAAATGTGACACCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 90 bp CCTGGTGTGTGCATTTGCTGTCATCCAGGACATCATTGCGGGTGTTaGCACAAATTGCTCTTCTTCTCTGGGTACCACCATCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: PGVCICCHPGHHCGC*HKLLFFSGYHHHSF
Trigger: GAAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TGCTACAGAAACTGTCATCCACCTTCTCCGTCTTCCCGTCCATCCTaGTGTATTTGGCACAGTGGATGTCTAAAGTACGGTAGCCCAAAC +
Preference number: 5 (lower is better)
Translates to: CYRNCHPPSPSSRPS*CIWHSGCLKYGSPN
Trigger: GTTTGGGCTACCGTACTTTAGACATCCACTGTGCCAAATACAGCAGGATGGACGGGAAGACGGAGAAGGTGGATGACAGTTTCTGTAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp AAGTGGCTGGGTTGGTCTTCATTAGTTAAACACTGCACAGATCTATaGATGACTCCTATGCCGCAGGACACTGAGCAACTGCCCCAGTTG +
Preference number: 5 (lower is better)
Translates to: KWLGWSSLVKHCTDL*MTPMPQDTEQLPQL
Trigger: CAACTGGGGCAGTTGCTCAGTGTCCTGCGGCATAGGAGTCATGCATAGATCTGTGCAGTGTTTAACTAATGAAGACCAACCCAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp CCACCACCATCACCTCTACAAACCGTGGGTAGGACAGAAAGCGTTTaGTTCTTTTGTGGTTCCATCTGTCCCTTGTGCTGTTTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: PPPSPLQTVGRTESV*FFCGSICPLCCLSG
Trigger: ACCAGACAAACAGCACAAGGGACAGATGGAACCACAAAAGAACCAAACGCTTTCTGTCCTACCCACGGTTTGTAGAGGTGATGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp TCCAACCTCCCCAGGATCCATCAATTGCAGGGCCCTCCATTTCTTTaGGAACACAAAATCCAAACTTGCAGTGCTTTCCAGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: SNLPRIHQLQGPPFL*EHKIQTCSAFQAHT
Trigger: AGTGTGAGCCTGGAAAGCACTGCAAGTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCCCTGCAATTGATGGATCCTGGGGAGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp ATACTCTGTGCATTTCTCCTTGGTTCCAGAGCCAGTATGGAAGGGTaGCAAGATGCTAATTCACAGTCCTGGGTGTCGGTTGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: ILCAFLLGSRASMEG*QDANSQSWVSVGLV
Trigger: AACTAGGCCAACCGACACCCAGGACTGTGAATTAGCATCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TTCTCGGTATACTCTGTGCATTTCTCCTTGGTTCCAGAGCCAGTATaGAAGGGTGGCAAGATGCTAATTCACAGTCCTGGGTGTCGGTTG +
Preference number: 5 (lower is better)
Translates to: FSVYSVHFSLVPEPV*KGGKMLIHSPGCRL
Trigger: CAACCGACACCCAGGACTGTGAATTAGCATCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTATACCGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp CGGAGAAGTTCTCTGAGTCACCGTGAGCCAGTGTCACATACTCCTTaGGATAGTCAGAATTCATCCCTGCACAGAATACCTTTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: RRSSLSHREPVSHTP*DSQNSSLHRIPLAA
Trigger: AGCCGCTAAAGGTATTCTGTGCAGGGATGAATTCTGACTATCCCAAGGAGTATGTGACACTGGCTCACGGTGACTCAGAGAACTTCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCCTCCTCCACACGTTCTaGAGCAGGTCCCAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGLLHTF*SRSQSG
Trigger: GCCACTTTGGGACCTGCTCAAGAACGTGTGGAGGAG...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCACTCTGCAGAACAACTaGCACCGGTCCTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: KRWSISCRSLSMLRGVKATLQNN*HRSFIK
Trigger: TTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAGT...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTGGACACAGATGTCATTaGTGTCCTGGCCACAGGGGG +
Preference number: 5 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLGHRCH*CPGHRG
Trigger: CCCCCTGTGGCCAGGACACAAATGACATCTGTGTCC...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp AATCTGGGTCACACTCACTTCGATCAATCACATGGTCGCTGTAGTTaGCACACACTACTTGTCGGGTTGCCTTACCTTGCCCACAAGTCA +
Preference number: 5 (lower is better)
Translates to: NLGHTHFDQSHGRCS*HTLLVGLPYLAHKS
Trigger: TGACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAACTACAGCGACCATGTGATTGATCGAAGTGAGTGTGACCCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp CTGGGCAGTTCACTGTGGTTTGGTAGCTGTATTCATAATTCTCCTTaGCGGTATAAATCTCACTGCAGGAGACCAGCCTTTGCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: LGSSLWFGSCIHNSP*RYKSHCRRPAFACS
Trigger: GCTACAGGCAAAGGCTGGTCTCCTGCAGTGAGATTTATACCGGCAAGGAGAATTATGAATACAGCTACCAAACCACAGTGAACTGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TCAGTGGGGCATAAGTGGCTGGGTTGGTCTTCATTAGTTAAACACTaGACAGATCTATGCATGACTCCTATGCCGCAGGACACTGAGCAA +
Preference number: 5 (lower is better)
Translates to: SVGHKWLGWSSLVKH*TDLCMTPMPQDTEQ
Trigger: TTGCTCAGTGTCCTGCGGCATAGGAGTCATGCATAGATCTGTGCAGTGTTTAACTAATGAAGACCAACCCAGCCACTTATGCCCCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TCCAGGACATCATTGCGGGTGTTGACACAAATTGCTCTTCTTCTCTaGGTACCACCATCACAGCTTCTAGAACATTCGGTCCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SRTSLRVLTQIALLL*VPPSQLLEHSVQAE
Trigger: TTCAGCCTGGACCGAATGTTCTAGAAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGCAGAGAGCACCTTTGTaGCCAAACCGCTCTTTAGCA +
Preference number: 5 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRQRAPL*PNRSLA
Trigger: TGCTAAAGAGCGGTTTGGCAACAAAGGTGCTCTCTG...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTGTCCCTTGTGCTGTTaGTCTGGTTGCTATAGCCAG +
Preference number: 5 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINCPLCC*SGCYSQ
Trigger: CTGGCTATAGCAACCAGACAAACAGCACAAGGGACA...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGCTCCATCCACATTATaGCACCAGAGCCGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGAPSTL*HQSRLH
Trigger: GTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCTCCTCCACACGTTCTaGAGCAGGTCCCAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AHRCTQIQGGGIELLSFILLHTF*SRSQSG
Trigger: GCCACTTTGGGACCTGCTCAAGAACGTGTGGAGGAG...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCTCATCCAGGACATCATaGCGGGTGTTGACACAAATT +
Preference number: 5 (lower is better)
Translates to: KRWSISCRSLSMLRGVKASSRTS*RVLTQI
Trigger: AATTTGTGTCAACACCCGCAATGATGTCCTGGATGA...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTACACTACTTGTCGGGTaGCCTTACCTTGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSTLLVG*PYLAHK
Trigger: CTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGTTGACACACACTACTaGTCGGGTTGCCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINVDTHY*SGCLTL
Trigger: CAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAAC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAACGGAAGTCCTCGTTTaGAAATGGGTGAGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSTEVLV*KWVSQA
Trigger: GGCTTGGCTCACCCATTTCAAAACGAGGACTTCCGT...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTACGGAAGTCCTCGTTTaGAAATGGGTGAGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSTEVLV*KWVSQA
Trigger: GGCTTGGCTCACCCATTTCAAAACGAGGACTTCCGT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp TTTGGTAGCTGTATTCATAATTCTCCTTGCCGGTATAAATCTCACTaGAGGAGACCAGCCTTTGCCTGTAGCCCTTTCCACAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: FGSCIHNSPCRYKSH*RRPAFACSPFHRSL
Trigger: CAGTGACCTGTGGAAAGGGCTACAGGCAAAGGCTGGTCTCCTGCAGTGAGATTTATACCGGCAAGGAGAATTATGAATACAGCTACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp CCAGAGCCGTCTGCACTGCATCATATAGGGGCACACTTGAGAGCCTaGCCCAAAAATCAGTTCACATTGTTTATTCACGTTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PEPSALHHIGAHLRA*PKNQFTLFIHVVEK
Trigger: CTTCTCTACAACGTGAATAAACAATGTGAACTGATTTTTGGGCCAGGCTCTCAAGTGTGCCCCTATATGATGCAGTGCAGACGGCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 90 bp CGGCAGGCTTTTCTTTCTTCTGGCTTCGTATCAGTGGGGCATAAGTaGCTGGGTTGGTCTTCATTAGTTAAACACTGCACAGATCTATGC +
Preference number: 5 (lower is better)
Translates to: RQAFLSSGFVSVGHK*LGWSSLVKHCTDLC
Trigger: GCATAGATCTGTGCAGTGTTTAACTAATGAAGACCAACCCAGCCACTTATGCCCCACTGATACGAAGCCAGAAGAAAGAAAAGCCTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTCACCCAAGTAGTTCTTaGAGTGCTGCCACTGGCAAA +
Preference number: 5 (lower is better)
Translates to: KRASHAQECGLCVSFLFLHPSSS*SAATGK
Trigger: TTTGCCAGTGGCAGCACTCAAAGAACTACTTGGGTG...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp GGGGTGTTAAGGCCATACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACGGGCCCTCCATTTCTTaGGGAACACAAAATCCAAAC +
Preference number: 5 (lower is better)
Translates to: GVLRPYTCGRSFVLLLINGPSIS*GTQNPN
Trigger: GTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCCC...GTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTATGGCCTTAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACTGGGCAGCAGACCATaGATGTTGAAGTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGLGSRP*MLKCLP
Trigger: TGGCAAACACTTCAACATCAATGGTCTGCTGCCCAG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGGACACAGATGTCATTaGTGTCCTGGCCACAGGGGG +
Preference number: 5 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKGHRCH*CPGHRG
Trigger: CCCCCTGTGGCCAGGACACAAATGACATCTGTGTCC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGGTGGTCGATCTCCTGTCGTTCTCTGAGTATGCTGAGGGGTGTTAAGGCCTCCTCAATGGGAATATaGAATGAGTACCGCACATCT +
Preference number: 5 (lower is better)
Translates to: KRWSISCRSLSMLRGVKASSMGI*NEYRTS
Trigger: AGATGTGCGGTACTCATTCAATATTCCCATTGAGGA...GGCCTTAACACCCCTCAGCATACTCAGAGAACGACAGGAGATCGACCACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTCCCCTTGGCAGGGCTaGCTGCATGCTTGCCACGGC +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYSPWQG*LHACHG
Trigger: GCCGTGGCAAGCATGCAGCAAGCCCTGCCAAGGGGA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTCCTGGTGTGTGCATTaGCTGTCATCCAGGACATCA +
Preference number: 5 (lower is better)
Translates to: KRASHAQECGLCVSFLFLSWCVH*LSSRTS
Trigger: TGATGTCCTGGATGACAGCAAATGCACACACCAGGA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATCTGTGCATTTCTCCTaGGTTCCAGAGCCAGTATGG +
Preference number: 5 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSSVHFS*VPEPVW
Trigger: CCATACTGGCTCTGGAACCAAGGAGAAATGCACAGA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp ACCCGGCAGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGCAGTTCACTGTGGTTaGGTAGCTGTATTCATAATT +
Preference number: 5 (lower is better)
Translates to: TRQGIRLPASREVISLAKAVHCG*VAVFII
Trigger: AATTATGAATACAGCTACCAAACCACAGTGAACTGC...TTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCTGCCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp ACAGCAGGAGAGCCTCCTTTCCCAGTGTCACTCTGTAATGAAGCTTTTGGTGGACAGGATGTCCTTCACTaGTCCTTGCAAACTCTAAGT +
Preference number: 5 (lower is better)
Translates to: TAGEPPFPVSLCNEAFGGQDVLH*SLQTLS
Trigger: ACTTAGAGTTTGCAAGGACAAGTGAAGGACATCCTG...TCCACCAAAAGCTTCATTACAGAGTGACACTGGGAAAGGAGGCTCTCCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 90 bp GCATTTGCTGTCATCCAGGACATCATTGCGGGTGTTGACACAAATTaGTCTTCTTCTCTGGGTACCACCATCACAGCTTCTAGAACATTC +
Preference number: 5 (lower is better)
Translates to: AFAVIQDIIAGVDTN*SSSLGTTITASRTF
Trigger: GAATGTTCTAGAAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTTTCCTCTTCATCCTCTaGCTCATCCACAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLFLFIL*LIHRLQ
Trigger: CTGCAGTCTGTGGATGAGCAAGAGGATGAAGAGGAA...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTTCTCTGATGGCTGTTTaGATGCCTCCTCCACACGTT +
Preference number: 5 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLSLMAV*MPPPHV
Trigger: AACGTGTGGAGGAGGCATCAAAACAGCCATCAGAGA...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTGCTGCGTTACAGTCATaGTCATCGACCACTGACATA +
Preference number: 5 (lower is better)
Translates to: KRASHAQECGLCVSFLFLAALQS*SSTTDI
Trigger: TATGTCAGTGGTCGATGACAATGACTGTAACGCAGC...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGTTGACACACACTACTaGTCGGGTTGCCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGVDTHY*SGCLTL
Trigger: CAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAAC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGAAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCCTCTGTTCATCAGGTTaGATTCTCTCTACACAGTCA +
Preference number: 5 (lower is better)
Translates to: GREQAMPKNVGCVSPFCFLCSSG*ILSTQS
Trigger: TGACTGTGTAGAGAGAATCAAACCTGATGAACAGAG...GAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGTATAGGGACATTCTGTaGGGTTGTGCAATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRYRDIL*GCAICD
Trigger: GTCACAGATTGCACAACCCAACAGAATGTCCCTATA...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 90 bp TTTGTTTTGTTCCTCTTCATCCTCTTGCTCATCCACAGACTGCAGTaGTTCAATGAAATAATCTCCATCGTGAGAGCGGAACGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: FVLFLFILLLIHRLQ*FNEIISIVRAERAH
Trigger: ATGGGCACGTTCCGCTCTCACGATGGAGATTATTTCATTGAACCACTGCAGTCTGTGGATGAGCAAGAGGATGAAGAGGAACAAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTACTCTGCAGAACAACTaGCACCGGTCCTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLTLQNN*HRSFIK
Trigger: TTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAGT...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTGCATGGGCTCCGGCTaGGCCTCAGGGTCACACATT +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYCMGSG*ASGSHI
Trigger: AATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGCA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGGCTGCGTTACAGTCATaGTCATCGACCACTGACATA +
Preference number: 5 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVAALQS*SSTTDI
Trigger: TATGTCAGTGGTCGATGACAATGACTGTAACGCAGC...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCTCTGTGCATTTCTCCTaGGTTCCAGAGCCAGTATGG +
Preference number: 5 (lower is better)
Translates to: AHRCTQIQGGGIELLSFISVHFS*VPEPVW
Trigger: CCATACTGGCTCTGGAACCAAGGAGAAATGCACAGA...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGGACAAGCATGTGTGTaGCACTGCTCACGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKGQACV*HCSRSV
Trigger: TACTGACCGTGAGCAGTGCAACACACATGCTTGTCC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACTCCATGCAGCATCTaGTGGACAAGCATGTGTGTT +
Preference number: 5 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVTPCSI*WTSMCV
Trigger: AACACACATGCTTGTCCACAAGATGCTGCATGGAGT...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AGGGTATTAGGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCATATAGGGACATTCTGTaGGGTTGTGCAATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: RVLGSQPQGKSYHWPKFSYRDIL*GCAICD
Trigger: GTCACAGATTGCACAACCCAACAGAATGTCCCTATA...TGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCCTAATACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCGTCCTTCACTTGTCCTaGCAAACTCTAAGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: PKFKVEVLNYYPSSVSYGVLHLS*QTLSQW
Trigger: CCACTGACTTAGAGTTTGCAAGGACAAGTGAAGGAC...GCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 90 bp GTTCCAGTAAAATTGCTGAGGTTTGTCCTCAATGGGAATATTGAATaGGTACCGCACATCTGGGTTATACAGCTTTCCCACGGACAACAC +
Preference number: 5 (lower is better)
Translates to: VPVKLLRFVLNGNIE*VPHIWVIQLSHGQH
Trigger: GTGTTGTCCGTGGGAAAGCTGTATAACCCAGATGTGCGGTACTCATTCAATATTCCCATTGAGGACAAACCTCAGCAATTTTACTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAAGGTGGAGGTATTGAATTACTATCCTTCATCCGTCTCCTATGGCTTCCTCTTTCCGTGTTGCAGGATTaGAACTTCATTCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QGGGIELLSFIRLLWLPLSVLQD*NFILLP
Trigger: AGGAAGGAGAATGAAGTTCAAATCCTGCAACACGGA...AAGAGGAAGCCATAGGAGACGGATGAAGGATAGTAATTCAATACCTCCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAATTGCCGGCAAAGGCCTaGGACACAGATGTCATTTGT +
Preference number: 5 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKLPAKA*DTDVIC
Trigger: ACAAATGACATCTGTGTCCAAGGCCTTTGCCGGCAA...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTTCCTCAATGGGAATATaGAATGAGTACCGCACATCT +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSSSMGI*NEYRTS
Trigger: AGATGTGCGGTACTCATTCAATATTCCCATTGAGGA...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGACTCTGTTCATCAGGTTaGATTCTCTCTACACAGTCA +
Preference number: 5 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGLCSSG*ILSTQS
Trigger: TGACTGTGTAGAGAGAATCAAACCTGATGAACAGAG...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GGCTCCCAGCCTCAAGGGAAGTCATATCATTGGCCAAAGTTTTCAGGTAAAAGGTATAATGTTGAAGGTTaGCTCCGTGGTATAAAACCA +
Preference number: 5 (lower is better)
Translates to: GSQPQGKSYHWPKFSGKRYNVEG*LRGIKP
Trigger: TGGTTTTATACCACGGAGCAAACCTTCAACATTATA...CCTTTTACCTGAAAACTTTGGCCAATGATATGACTTCCCTTGAGGCTGGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGAGCAGACCATTGATGTaGAAGTGTTTGCCATCAAAG +
Preference number: 5 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVSRPLM*KCLPSK
Trigger: CTTTGATGGCAAACACTTCAACATCAATGGTCTGCT...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGGTTCCTGCCACTGTTTaGCATGAAGAATTATCTCCA +
Preference number: 5 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVVPATV*HEELSP
Trigger: TGGAGATAATTCTTCATGCAAAACAGTGGCAGGAAC...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTACTGTTCCAGTAAAATaGCTGAGGTTTGTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSTVPVK*LRFVLN
Trigger: ATTGAGGACAAACCTCAGCAATTTTACTGGAACAGT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp GCACACAGATGCACCCAAATTCAAGGTGGAGGTATTGAATTACTATCCTTCATCTCATCCAGGACATCATaGCGGGTGTTGACACAAATT +
Preference number: 5 (lower is better)
Translates to: AHRCTQIQGGGIELLSFISSRTS*RVLTQI
Trigger: AATTTGTGTCAACACCCGCAATGATGTCCTGGATGA...GATGAAGGATAGTAATTCAATACCTCCACCTTGAATTTGGGTGCATCTGTGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTAATGGCTTCCATCTTTaGCCAAGCAGTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSNGFHL*PSSKHF
Trigger: GAAATGTTTACTGCTTGGCAAAAGATGGAAGCCATT...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTGCAGTTCACTGTGGTTaGGTAGCTGTATTCATAATT +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSAVHCG*VAVFII
Trigger: AATTATGAATACAGCTACCAAACCACAGTGAACTGC...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGTCCTTCACTTGTCCTaGCAAACTCTAAGTCAGTGG +
Preference number: 5 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKVLHLS*QTLSQW
Trigger: CCACTGACTTAGAGTTTGCAAGGACAAGTGAAGGAC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp CACTGCCTCAGCACGTTCATTCCTGAAAGAAGTAACAAAAGGTGGATTCGTGGATTAACTCCTTCTTCTTaGCATTTATTGCTGTCATCG +
Preference number: 5 (lower is better)
Translates to: HCLSTFIPERSNKRWIRGLTPSS*HLLLSS
Trigger: CGATGACAGCAATAAATGCAAAGAAGAAGGAGTTAA...TCCACGAATCCACCTTTTGTTACTTCTTTCAGGAATGAACGTGCTGAGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACATTTCCGACTGCACTTaGACCACATCCAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYISDCT*TTSRGW
Trigger: CCAACCCCTGGATGTGGTCAAAGTGCAGTCGGAAAT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp CAGGAGTCCAAGGCACCATGGAGCAGAGTAGATCATATTACCAACAACAACAGTTATCTTTCCGGGCCTTaGAGTTTAAAATATGATCAC +
Preference number: 5 (lower is better)
Translates to: QESKAPWSRVDHITNNNSYLSGP*SLKYDH
Trigger: GTGATCATATTTTAAACTCAAAGGCCCGGAAAGATA...ACTGTTGTTGTTGGTAATATGATCTACTCTGCTCCATGGTGCCTTGGACTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAGAGAGCAAGCCATGCCCAAGAATGTGGGTTGTGTGTCTCCTTTCTGTTTCTTTATCTTTCCGGGCCTTaGAGTTTAAAATATGATCAC +
Preference number: 5 (lower is better)
Translates to: KRASHAQECGLCVSFLFLYLSGP*SLKYDH
Trigger: GTGATCATATTTTAAACTCAAAGGCCCGGAAAGATA...AAGAAACAGAAAGGAGACACACAACCCACATTCTTGGGCATGGCTTGCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TACACCTGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACTGTTCCAGTAAAATaGCTGAGGTTTGTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: YTCGRSFVLLLINLEDIVTVPVK*LRFVLN
Trigger: ATTGAGGACAAACCTCAGCAATTTTACTGGAACAGT...CACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACAGGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCTGGGCAGCAGACCATaGATGTTGAAGTGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYLGSRP*MLKCLP
Trigger: TGGCAAACACTTCAACATCAATGGTCTGCTGCCCAG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp TGTGGTAGATCCTTTGTGTTGCTGCTCATAAACTTGGAGGATATCGTGACAAAAGTTCCTGCCACTGTTTaGCATGAAGAATTATCTCCA +
Preference number: 5 (lower is better)
Translates to: CGRSFVLLLINLEDIVTKVPATV*HEELSP
Trigger: TGGAGATAATTCTTCATGCAAAACAGTGGCAGGAAC...TTTTGTCACGATATCCTCCAAGTTTATGAGCAGCAACACAAAGGATCTACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTCCTGGTGTGTGCATTaGCTGTCATCCAGGACATCA +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYSWCVH*LSSRTS
Trigger: TGATGTCCTGGATGACAGCAAATGCACACACCAGGA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACACTCCATGCAGCATCTaGTGGACAAGCATGTGTGTT +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYTPCSI*WTSMCV
Trigger: AACACACATGCTTGTCCACAAGATGCTGCATGGAGT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACACACAAAATCCAAACTaGCAGTGCTTTCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYTQNPN*QCFPGS
Trigger: TGAGCCTGGAAAGCACTGCAAGTTTGGATTTTGTGT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACTCCGTGTTGCAGGATTaGAACTTCATTCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYSVLQD*NFILLP
Trigger: AGGAAGGAGAATGAAGTTCAAATCCTGCAACACGGA...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACCAGGATGTCCTTCACTaGTCCTTGCAAACTCTAAGT +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYQDVLH*SLQTLS
Trigger: ACTTAGAGTTTGCAAGGACAAGTGAAGGACATCCTG...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS-3UTR CAA 90 bp AAAAGTAAACAACAGTGTACCGTGATAACGAAGAGTCACTTTGTCATATACTACAATGGCTTCCATCTTTaGCCAAGCAGTAAACATTTC +
Preference number: 5 (lower is better)
Translates to: KSKQQCTVITKSHFVIYYNGFHL*PSSKHF
Trigger: GAAATGTTTACTGCTTGGCAAAAGATGGAAGCCATT...GTAGTATATGACAAAGTGACTCTTCGTTATCACGGTACACTGTTGTTTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CAGGGACCCGCCTGCCAAGCTGCACACTCTGGCTGCTaGCACGTCTGCATGGGCTCCGGCTTGGCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: QGPACQAAHSGC*HVCMGSGLASG
Trigger: CCCTGAGGCCAAGCCGGAGCCCATGCAGACGTGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp GACACTGCACTGTCCCCAGGGACCCGCCTGCCAAGCTaGACACTCTGGCTGCTGACACGTCTGCATGGGCTC +
Preference number: 6 (lower is better)
Translates to: DTALSPGTRLPS*TLWLLTRLHGL
Trigger: GAGCCCATGCAGACGTGTCAGCAGCCAGAGTGTGCAGCTTGGCAGGCGGGTCCCTGGGGACAGTGCAGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CACGCCTTGGCCACAGGACACAGAGCACTGACTCCATaGGCCAGCCTTCCATCTGGGGCACCGTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: HALATGHRALTP*ASLPSGAPSSS
Trigger: CGAGGAGGACGGTGCCCCAGATGGAAGGCTGGCGCATGGAGTCAGTGCTCTGTGTCCTGTGGCCAAGGCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CGTTGGCCCGCTGACAGACCACCAGTCTTGTCCGCATaGCTCCACCACACAGCTTGGTACACTCTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RWPADRPPVLSA*LHHTAWYTLPS
Trigger: GCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CTCCTATGCCGCAGGACACTGAGCAACTGCCCCAGTTaGCAACTCTCCAGGTGGCCGAGACAGGACAGTCCC +
Preference number: 6 (lower is better)
Translates to: LLCRRTLSNCPS*QLSRWPRQDSP
Trigger: GGGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTCAGTGTCCTGCGGCATAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp ACACAGAGCACTGACTCCATGCGCCAGCCTTCCATCTaGGGCACCGTCCTCCTCGGCACCTTCTGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: TQSTDSMRQPSI*GTVLLGTFCAH
Trigger: ATGGGCACAGAAGGTGCCGAGGAGGACGGTGCCCCAGATGGAAGGCTGGCGCATGGAGTCAGTGCTCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp AGTCTGGGAATCGGTCACCGTTGGCCCGCTGACAGACCACCAGTCTaGTCCGCATGCCTCCACCACACAGCTTGGTACACTCTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: SLGIGHRWPADRPPV*SACLHHTAWYTLPS
Trigger: GCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp GCCACCTCAAGTCACAGTCTGTGCCGCACGCTTCAGTaGCAGGTCCTGGCTGGGGCAGCCGGTCACATCTTT +
Preference number: 6 (lower is better)
Translates to: ATSSHSLCRTLQ*QVLAGAAGHIF
Trigger: AAAGATGTGACCGGCTGCCCCAGCCAGGACCTGTCACTGAAGCGTGCGGCACAGACTGTGACTTGAGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CTAATAATTTCACTTGCCTCGGGTGCAGCCTGTCCTTaGGCACGGCCGCCGCGGAGTCAGGGCTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: LIISLASGAACP*ARPPRSQGSSS
Trigger: AGATGAGGAGCCCTGACTCCGCGGCGGCCGTGCGCAAGGACAGGCTGCACCCGAGGCAAGTGAAATTATTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp TGCCTCCACCACACAGCTTGGTACACTCTCCCCAGCTaGCGTAAGCCCATTGGGGACACGGGCCAGATTCAC +
Preference number: 6 (lower is better)
Translates to: CLHHTAWYTLPS*RKPIGDTGQIH
Trigger: GTGAATCTGGCCCGTGTCCCCAATGGGCTTACGGCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp CCACCAGTCTTGTCCGCATGCCTCCACCACACAGCTTaGTACACTCTCCCCAGCTGCCGTAAGCCCATTGGG +
Preference number: 6 (lower is better)
Translates to: PPVLSACLHHTA*YTLPSCRKPIG
Trigger: CCCAATGGGCTTACGGCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GGCTGTAGGCTGCAGCTCTCACGGTCTGGAGGCCGCTaGTCTGAGTCACAGTGTGTGCTGTGCACCTCACTT +
Preference number: 6 (lower is better)
Translates to: GCRLQLSRSGGR*SESQCVLCTSL
Trigger: AAGTGAGGTGCACAGCACACACTGTGACTCAGACCAGCGGCCTCCAGACCGTGAGAGCTGCAGCCTACAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp ACTCCTATGCCGCAGGACACTGAGCAACTGCCCCAGTaGCCAACTCTCCAGGTGGCCGAGACAGGACAGTCC +
Preference number: 6 (lower is better)
Translates to: TPMPQDTEQLPQ*PTLQVAETGQS
Trigger: GGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTCAGTGTCCTGCGGCATAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CAACTCAAGTCTGGGAATCGGTCACCGTTGGCCCGCTaGCAGACCACCAGTCTTGTCCGCATGCCTCCACCA +
Preference number: 6 (lower is better)
Translates to: QLKSGNRSPLAR*QTTSLVRMPPP
Trigger: TGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCCCAGACTTGAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CACTCACTCTCTCTGGCTGCTTTGTGTGTCCCGATCTaGCAGCCCACATGCCTCTGCTGCACGCCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: HSLSLAALCVPI*QPTCLCCTPWP
Trigger: TGGCCAAGGCGTGCAGCAGAGGCATGTGGGCTGTCAGATCGGGACACACAAAGCAGCCAGAGAGAGTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CCACTGCTCTGCCCTCCAAGTGTAGAGAGGACATGGTaGGGCTTGGCAGACACGCTCCGACTCTGGTCTGCT +
Preference number: 6 (lower is better)
Translates to: PLLCPPSVERTW*GLADTLRLWSA
Trigger: AGCAGACCAGAGTCGGAGCGTGTCTGCCAAGCCTCACCATGTCCTCTCTACACTTGGAGGGCAGAGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TGCACCTCACTTTGGTCCTCTGCTACGCATACCACCTaGCGGTACCGGGAGCCTTCGCCACACGTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: CTSLWSSATHTT*RYREPSPHVLV
Trigger: TACCAAGACGTGTGGCGAAGGCTCCCGGTACCGGCAGGTGGTATGCGTAGCAGAGGACCAAAGTGAGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp AGCCCAAACCACACTGGGCACTGCATTCGCTCTTGCTaGCAACGTGCCACCTCAAGTCACAGTCTGTGCCGC +
Preference number: 6 (lower is better)
Translates to: SPNHTGHCIRSC*QRATSSHSLCR
Trigger: GCGGCACAGACTGTGACTTGAGGTGGCACGTTGCCAGCAAGAGCGAATGCAGTGCCCAGTGTGGTTTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp CAGCTTGGTACACTCTCCCCAGCTGCCGTAAGCCCATaGGGGACACGGGCCAGATTCACAGGCTCTCTGTTC +
Preference number: 6 (lower is better)
Translates to: QLGTLSPAAVSP*GTRARFTGSLF
Trigger: GAACAGAGAGCCTGTGAATCTGGCCCGTGTCCCCAATGGGCTTACGGCAGCTGGGGAGAGTGTACCAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp ATCGGTCACCGTTGGCCCGCTGACAGACCACCAGTCTaGTCCGCATGCCTCCACCACACAGCTTGGTACACT +
Preference number: 6 (lower is better)
Translates to: IGHRWPADRPPV*SACLHHTAWYT
Trigger: AGTGTACCAAGCTGTGTGGTGGAGGCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp GGCTCACACTCGGTTCCATCTGCCCAGGGCGTGTGCTaGGTCCTGCAGCCTTTGTGTGCTCCATCCACATTA +
Preference number: 6 (lower is better)
Translates to: GSHSVPSAQGVC*VLQPLCAPSTL
Trigger: TAATGTGGATGGAGCACACAAAGGCTGCAGGACTCAGCACACGCCCTGGGCAGATGGAACCGAGTGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 72 bp GTCTTTCCACCACATTGTCCGATCCGCTGTACTCAATaGCGGCGCTCCCCACGCGGACCTCCCTTTTGGACA +
Preference number: 6 (lower is better)
Translates to: VFPPHCPIRCTQ*RRSPRGPPFWT
Trigger: TGTCCAAAAGGGAGGTCCGCGTGGGGAGCGCCGTCATTGAGTACAGCGGATCGGACAATGTGGTGGAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp TCTCATCAGCCACAGAGCCGTCCTCGTCCCGGCAGCTaGCGTATCTCATCCGGGTACCTTTTCCACAAGTGG +
Preference number: 6 (lower is better)
Translates to: SHQPQSRPRPGS*RISSGYLFHKW
Trigger: CCACTTGTGGAAAAGGTACCCGGATGAGATACGTCAGCTGCCGGGACGAGGACGGCTCTGTGGCTGATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CAAGTTTTCGTCTCCGCTCCCCTTGGCAGGGCTTGCTaGATGCTTGCCACGGCCCGTGACTGTTCCAGTAAA +
Preference number: 6 (lower is better)
Translates to: QVFVSAPLGRAC*MLATARDCSSK
Trigger: TTTACTGGAACAGTCACGGGCCGTGGCAAGCATGCAGCAAGCCCTGCCAAGGGGAGCGGAGACGAAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CACGGTCTGGAGGCCGCTGGTCTGAGTCACAGTGTGTaGTGTGCACCTCACTTTGGTCCTCTGCTACGCATA +
Preference number: 6 (lower is better)
Translates to: HGLEAAGLSHSV*CAPHFGPLLRI
Trigger: TATGCGTAGCAGAGGACCAAAGTGAGGTGCACAGCACACACTGTGACTCAGACCAGCGGCCTCCAGACCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GTCACAGTCTGTGCCGCACGCTTCAGTGACAGGTCCTaGCTGGGGCAGCCGGTCACATCTTTGATCAGAAAC +
Preference number: 6 (lower is better)
Translates to: VTVCAARFSDRS*LGQPVTSLIRN
Trigger: GTTTCTGATCAAAGATGTGACCGGCTGCCCCAGCCAGGACCTGTCACTGAAGCGTGCGGCACAGACTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GGTGAGCCAAGCCAGTCCATTGAGGGCACGGTGACATaGAGCAGTCCTGGTCAGTCTCGGGGATGTAATCTG +
Preference number: 6 (lower is better)
Translates to: GEPSQSIEGTVT*SSPGQSRGCNL
Trigger: CAGATTACATCCCCGAGACTGACCAGGACTGCTCCATGTCACCGTGCCCTCAATGGACTGGCTTGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GGACTTCACAACTCAAGTCTGGGAATCGGTCACCGTTaGCCCGCTGACAGACCACCAGTCTTGTCCGCATGC +
Preference number: 6 (lower is better)
Translates to: GLHNSSLGIGHR*PADRPPVLSAC
Trigger: GCATGCGGACAAGACTGGTGGTCTGTCAGCGGGCCAACGGTGACCGATTCCCAGACTTGAGTTGTGAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TGGTCTGAGTCACAGTGTGTGCTGTGCACCTCACTTTaGTCCTCTGCTACGCATACCACCTGCCGGTACCGG +
Preference number: 6 (lower is better)
Translates to: WSESQCVLCTSL*SSATHTTCRYR
Trigger: CCGGTACCGGCAGGTGGTATGCGTAGCAGAGGACCAAAGTGAGGTGCACAGCACACACTGTGACTCAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp ACACTGAGCAACTGCCCCAGTTGCCAACTCTCCAGGTaGCCGAGACAGGACAGTCCCTCAAGTAGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: TLSNCPSCQLSR*PRQDSPSSSRD
Trigger: ATCCCTGCTACTTGAGGGACTGTCCTGTCTCGGCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp TCCACCACACAGCTTGGTACACTCTCCCCAGCTGCCGTAAGCCCATaGGGGACACGGGCCAGATTCACAGGCTCTCTGTTCATCAGGTTT +
Preference number: 6 (lower is better)
Translates to: STTQLGTLSPAAVSP*GTRARFTGSLFIRF
Trigger: AAACCTGATGAACAGAGAGCCTGTGAATCTGGCCCGTGTCCCCAATGGGCTTACGGCAGCTGGGGAGAGTGTACCAAGCTGTGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp AAATGGGTGAGCCAAGCCAGTCCATTGAGGGCACGGTaGCATGGAGCAGTCCTGGTCAGTCTCGGGGATGTA +
Preference number: 6 (lower is better)
Translates to: KWVSQASPLRAR*HGAVLVSLGDV
Trigger: TACATCCCCGAGACTGACCAGGACTGCTCCATGTCACCGTGCCCTCAATGGACTGGCTTGGCTCACCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp TTCCACAGGTCACTGAGCACTCAGACCATTCTCCTGTaGTCCACACGTACTCGCAGGGCTGTAGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FHRSLSTQTILL*STRTRRAVGCS
Trigger: GCTGCAGCCTACAGCCCTGCGAGTACGTGTGGATCACAGGAGAATGGTCTGAGTGCTCAGTGACCTGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CACAGATCTATGCATGACTCCTATGCCGCAGGACACTaGGCAACTGCCCCAGTTGCCAACTCTCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: HRSMHDSYAAGH*ATAPVANSPGG
Trigger: GCCACCTGGAGAGTTGGCAACTGGGGCAGTTGCTCAGTGTCCTGCGGCATAGGAGTCATGCATAGATCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp GCCGGGCAGTTGGGAAGGCAAAGGATAGGTCCTGGATaGAGGTTCATTCAGCAAGCACTCTCCGTACCCAGT +
Preference number: 6 (lower is better)
Translates to: AGQLGRQRIGPG*RFIQQALSVPS
Trigger: ACTGGGTACGGAGAGTGCTTGCTGAATGAACCTGCATCCAGGACCTATCCTTTGCCTTCCCAACTGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp ACTCGGTTCCATCTGCCCAGGGCGTGTGCTGAGTCCTaGAGCCTTTGTGTGCTCCATCCACATTATTGCACC +
Preference number: 6 (lower is better)
Translates to: TRFHLPRACAES*SLCVLHPHYCT
Trigger: GGTGCAATAATGTGGATGGAGCACACAAAGGCTGCAGGACTCAGCACACGCCCTGGGCAGATGGAACCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp TCGTGGGAAAGGGTTCCCCGAGGGGGTTCACTCGGATaGGAGACGCGATCTCATATTCGCTCAGACTCTCTA +
Preference number: 6 (lower is better)
Translates to: SWERVPRGGSLG*ETRSHIRSDSL
Trigger: TAGAGAGTCTGAGCGAATATGAGATCGCGTCTCCCATCCGAGTGAACCCCCTCGGGGAACCCTTTCCCACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp GAAGGCCGGGCAGTTGGGAAGGCAAAGGATAGGTCCTaGATGCAGGTTCATTCAGCAAGCACTCTCCGTACC +
Preference number: 6 (lower is better)
Translates to: EGRAVGKAKDRS*MQVHSASTLRT
Trigger: GGTACGGAGAGTGCTTGCTGAATGAACCTGCATCCAGGACCTATCCTTTGCCTTCCCAACTGCCCGGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp ATGCCTCCTCCACACGTTCTTGAGCAGGTCCCAAAGTaGCTCCAACCTCCCCAGGATCCATCAATTGCAGGG +
Preference number: 6 (lower is better)
Translates to: MPPPHVLEQVPK*LQPPQDPSIAG
Trigger: CCCTGCAATTGATGGATCCTGGGGAGGTTGGAGCCACTTTGGGACCTGCTCAAGAACGTGTGGAGGAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp GGGTCAGAGGCAGAGTTAATGCTTCGCCGCCTTCTTTaGAAGTGCACGTTCGTGGGAAAGGGTTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: GSEAELMLRRLL*KCTFVGKGSPR
Trigger: CCTCGGGGAACCCTTTCCCACGAACGTGCACTTCAAAAGAAGGCGGCGAAGCATTAACTCTGCCTCTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp GCTAGGGCTGTCACTCCTGGGACGGAAGTCCTCGTTTaGAAATGGGTGAGCCAAGCCAGTCCATTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: ARAVTPGTEVLV*KWVSQASPLRA
Trigger: TGCCCTCAATGGACTGGCTTGGCTCACCCATTTCAAAACGAGGACTTCCGTCCCAGGAGTGACAGCCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp ATTCGGTCCAGGCTGAATAGCGCCATCCACCTGTGCTaGACTCTCCTGAGCATTTCTCCTGGTTACTCGGTC +
Preference number: 6 (lower is better)
Translates to: IRSRLNSAIHLC*TLLSISPGYSV
Trigger: GACCGAGTAACCAGGAGAAATGCTCAGGAGAGTGCAGCACAGGTGGATGGCGCTATTCAGCCTGGACCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TTCCATCTGGGGCACCGTCCTCCTCGGCACCTTCTGTaGCCATGTGGCTTAGGAAGGTGCTTACAGTTATCA +
Preference number: 6 (lower is better)
Translates to: FHLGHRPPRHLL*PCGLGRCLQLS
Trigger: TGATAACTGTAAGCACCTTCCTAAGCCACATGGGCACAGAAGGTGCCGAGGAGGACGGTGCCCCAGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TTCCTCCTCGGAATACAGCTTGGTCTGGTTTACCCCTaGCTCTCCAAGGAGGGTGACAGTGAACAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: FLLGIQLGLVYP*LSKEGDSEQWS
Trigger: GCTCCACTGTTCACTGTCACCCTCCTTGGAGAGCCAGGGGTAAACCAGACCAAGCTGTATTCCGAGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp ACTCTGGCTGCTGACACGTCTGCATGGGCTCCGGCTTaGCCTCAGGGTCACACATTCTATCGCTTAATCGAT +
Preference number: 6 (lower is better)
Translates to: TLAADTSAWAPA*PQGHTFYRLID
Trigger: ATCGATTAAGCGATAGAATGTGTGACCCTGAGGCCAAGCCGGAGCCCATGCAGACGTGTCAGCAGCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp ACTCTGGTCTGCTGTAGGAGCTGCACTCACTCTCTCTaGCTGCTTTGTGTGTCCCGATCTGACAGCCCACAT +
Preference number: 6 (lower is better)
Translates to: TLVCCRSCTHSL*LLCVSRSDSPH
Trigger: ATGTGGGCTGTCAGATCGGGACACACAAAGCAGCCAGAGAGAGTGAGTGCAGCTCCTACAGCAGACCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp GCTGGGCGGCTGGGCGCCTGGGCAGTTCACTGTGGTTaGGTAGCTGTATTCATAATTCTCCTTGCCGGTATA +
Preference number: 6 (lower is better)
Translates to: AGRLGAWAVHCG*VAVFIILLAGI
Trigger: TATACCGGCAAGGAGAATTATGAATACAGCTACCAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp GGGATGGACGCTGGGCGGCTGGGCGCCTGGGCAGTTCACTGTGGTTaGGTAGCTGTATTCATAATTCTCCTTGCCGGTATAAATCTCACT +
Preference number: 6 (lower is better)
Translates to: GMDAGRLGAWAVHCG*VAVFIILLAGINLT
Trigger: AGTGAGATTTATACCGGCAAGGAGAATTATGAATACAGCTACCAAACCACAGTGAACTGCCCAGGCGCCCAGCCGCCCAGCGTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp GAGTCCTGCAGCCTTTGTGTGCTCCATCCACATTATTaGACCAGAGCCGTCTGCACTGCATCATATAGGGGC +
Preference number: 6 (lower is better)
Translates to: ESCSLCVLHPHY*TRAVCTASYRG
Trigger: GCCCCTATATGATGCAGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGCACACAAAGGCTGCAGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp CACTCTGTCTCGGAGCTGGTAGTAGGCTGTGTTTCCTaGCACTCTGCAGAACAACTTGCACCGGTCCTTCAT +
Preference number: 6 (lower is better)
Translates to: HSVSELVVGCVS*HSAEQLAPVLH
Trigger: ATGAAGGACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTACTACCAGCTCCGAGACAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TGTCTAAAGTACGGTAGCCCAAACCACACTGGGCACTaGATTCGCTCTTGCTGGCAACGTGCCACCTCAAGT +
Preference number: 6 (lower is better)
Translates to: CLKYGSPNHTGH*IRSCWQRATSS
Trigger: ACTTGAGGTGGCACGTTGCCAGCAAGAGCGAATGCAGTGCCCAGTGTGGTTTGGGCTACCGTACTTTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp AACATTCGGTCCAGGCTGAATAGCGCCATCCACCTGTaGTGCACTCTCCTGAGCATTTCTCCTGGTTACTCG +
Preference number: 6 (lower is better)
Translates to: NIRSRLNSAIHL*CTLLSISPGYS
Trigger: CGAGTAACCAGGAGAAATGCTCAGGAGAGTGCAGCACAGGTGGATGGCGCTATTCAGCCTGGACCGAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp TACTCAATGACGGCGCTCCCCACGCGGACCTCCCTTTaGGACATGGAGACAACAAAGTCTCCATTTAGCAGG +
Preference number: 6 (lower is better)
Translates to: YSMTALPTRTSL*DMETTKSPFSR
Trigger: CCTGCTAAATGGAGACTTTGTTGTCTCCATGTCCAAAAGGGAGGTCCGCGTGGGGAGCGCCGTCATTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp GATCCGCTGTACTCAATGACGGCGCTCCCCACGCGGACCTCCCTTTaGGACATGGAGACAACAAAGTCTCCATTTAGCAGGAATTCACCT +
Preference number: 6 (lower is better)
Translates to: DPLYSMTALPTRTSL*DMETTKSPFSRNSP
Trigger: AGGTGAATTCCTGCTAAATGGAGACTTTGTTGTCTCCATGTCCAAAAGGGAGGTCCGCGTGGGGAGCGCCGTCATTGAGTACAGCGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CACATTTGTCCTGAGCTCTGCAGATATCTTCCCTTGTaGCCAGAACGGCTGTGTCGTGCTGAATCCCACCCA +
Preference number: 6 (lower is better)
Translates to: HICPELCRYLPL*PERLCRAESHP
Trigger: TGGGTGGGATTCAGCACGACACAGCCGTTCTGGTCACAAGGGAAGATATCTGCAGAGCTCAGGACAAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 72 bp GTGCTTATGCCCTTTCCCACAGGTGACCAAGCACTCTaGCCAGTCTCCTGTTTTCCAATGGGGACAGGAGAA +
Preference number: 6 (lower is better)
Translates to: VLMPFPTGDQAL*PVSCFPMGTGE
Trigger: TTCTCCTGTCCCCATTGGAAAACAGGAGACTGGTCAGAGTGCTTGGTCACCTGTGGGAAAGGGCATAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TGTGTGCTCCATCCACATTATTGCACCAGAGCCGTCTaGACTGCATCATATAGGGGCACACTTGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: CVLHPHYCTRAV*TASYRGTLESL
Trigger: CAGGCTCTCAAGTGTGCCCCTATATGATGCAGTGCAGACGGCTCTGGTGCAATAATGTGGATGGAGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp TACCCCTGGCTCTCCAAGGAGGGTGACAGTGAACAGTaGAGCGATAAATCCGGTATGGGCGGTGAGATTAAA +
Preference number: 6 (lower is better)
Translates to: YPWLSKEGDSEQ*SDKSGMGGEIK
Trigger: TTTAATCTCACCGCCCATACCGGATTTATCGCTCCACTGTTCACTGTCACCCTCCTTGGAGAGCCAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp CTAAGTTCCATTTCCTCCTCGGAATACAGCTTGGTCTaGTTTACCCCTGGCTCTCCAAGGAGGGTGACAGTG +
Preference number: 6 (lower is better)
Translates to: LSSISSSEYSLV*FTPGSPRRVTV
Trigger: CACTGTCACCCTCCTTGGAGAGCCAGGGGTAAACCAGACCAAGCTGTATTCCGAGGAGGAAATGGAACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp GTGGCTGAGCATGGAGTCCAAGACCCAAATCGCCACTaGGTTCTCGGTATACTCTGTGCATTTCTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: VAEHGVQDPNRH*VLGILCAFLLG
Trigger: ACCAAGGAGAAATGCACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTCTTGGACTCCATGCTCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp CATGGAGCAGTCCTGGTCAGTCTCGGGGATGTAATCTaGGTCACACTCACTTCGATCAATCACATGGTCGCT +
Preference number: 6 (lower is better)
Translates to: HGAVLVSLGDVI*VTLTSINHMVA
Trigger: AGCGACCATGTGATTGATCGAAGTGAGTGTGACCCAGATTACATCCCCGAGACTGACCAGGACTGCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GCATGCTGGTCAGGTCGAGTCGGATTTTCTGGAAACTaGAAAAGCCAGCAGCTGTGTAGTCCTTCCGGCAAT +
Preference number: 6 (lower is better)
Translates to: ACWSGRVGFSGN*KSQQLCSPSGN
Trigger: ATTGCCGGAAGGACTACACAGCTGCTGGCTTTTCCAGTTTCCAGAAAATCCGACTCGACCTGACCAGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp TCTAGAGCCTTCCACTGTCCACAGGGTGTCACAGAACACTCTTCCTaGGCTACTGGTTTAGGTAAGGTAGCACAGGCACTCTCATCAGCC +
Preference number: 6 (lower is better)
Translates to: SRAFHCPQGVTEHSS*ATGLGKVAQALSSA
Trigger: GGCTGATGAGAGTGCCTGTGCTACCTTACCTAAACCAGTAGCCAAGGAAGAGTGTTCTGTGACACCCTGTGGACAGTGGAAGGCTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp CTCCAACCTCCCCAGGATCCATCAATTGCAGGGCCCTCCATTTCTTaGGGAACACAAAATCCAAACTTGCAGTGCTTTCCAGGCTCACAC +
Preference number: 6 (lower is better)
Translates to: LQPPQDPSIAGPSIS*GTQNPNLQCFPGSH
Trigger: GTGTGAGCCTGGAAAGCACTGCAAGTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCCCTGCAATTGATGGATCCTGGGGAGGTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 90 bp TTGAGCAGGTCCCAAAGTGGCTCCAACCTCCCCAGGATCCATCAATaGCAGGGCCCTCCATTTCTTTGGGAACACAAAATCCAAACTTGC +
Preference number: 6 (lower is better)
Translates to: LSRSQSGSNLPRIHQ*QGPPFLWEHKIQTC
Trigger: GCAAGTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCCCTGCAATTGATGGATCCTGGGGAGGTTGGAGCCACTTTGGGACCTGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 90 bp TCTTGTGGACAAGCATGTGTGTTGCACTGCTCACGGTCAGTAGGTTaGTCCAGGACTTCACAACTCAAGTCTGGGAATCGGTCACCGTTG +
Preference number: 6 (lower is better)
Translates to: SCGQACVLHCSRSVG*SRTSQLKSGNRSPL
Trigger: CAACGGTGACCGATTCCCAGACTTGAGTTGTGAAGTCCTGGACAAACCTACTGACCGTGAGCAGTGCAACACACATGCTTGTCCACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp TCTCCTGAGCATTTCTCCTGGTTACTCGGTCTGGGTTaGCTGCTACAGAAACTGTCATCCACCTTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: SPEHFSWLLGLG*LLQKLSSTFSV
Trigger: GACGGAGAAGGTGGATGACAGTTTCTGTAGCAGTCAACCCAGACCGAGTAACCAGGAGAAATGCTCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CCACATCCAGGGGTTGGTGTAGAAGTTCAGTGTTGGTaGCATGACATGCTGGGGACTCTTAACTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: PHPGVGVEVQCW*HDMLGTLNSFF
Trigger: GAAGAAGGAGTTAAGAGTCCCCAGCATGTCATGGCACCAACACTGAACTTCTACACCAACCCCTGGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp CTCGGAGCTGGTAGTAGGCTGTGTTTCCTGCCACTCTaGAGAACAACTTGCACCGGTCCTTCATCAAAATTC +
Preference number: 6 (lower is better)
Translates to: LGAGSRLCFLPL*RTTCTGPSSKF
Trigger: GAATTTTGATGAAGGACCGGTGCAAGTTGTTCTGCAGAGTGGCAGGAAACACAGCCTACTACCAGCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TTTGATCAGAAACGGTTAGCTGATCAGACTCCCTGGTaGAAACAAGTTTTCGTCTCCGCTCCCCTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: FDQKRLADQTPW*KQVFVSAPLGR
Trigger: CCTGCCAAGGGGAGCGGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp AGACCCAAATCGCCACTGGGTTCTCGGTATACTCTGTaGATTTCTCCTTGGTTCCAGAGCCAGTATGGAAGG +
Preference number: 6 (lower is better)
Translates to: RPKSPLGSRYTL*ISPWFQSQYGR
Trigger: CCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTATACCGAGAACCCAGTGGCGATTTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp ATGGTCGCTGTAGTTGACACACACTACTTGTCGGGTTaGCTTACCTTGCCCACAAGTCACGGAACAAGAGCT +
Preference number: 6 (lower is better)
Translates to: MVAVVDTHYLSG*LTLPTSHGTRA
Trigger: AGCTCTTGTTCCGTGACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAACTACAGCGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp CCTGTGGTCAGCCACCACCATCACCTCTACAAACCGTaGGTAGGACAGAAAGCGTTTGGTTCTTTTGTGGTT +
Preference number: 6 (lower is better)
Translates to: PVVSHHHHLYKP*VGQKAFGSFVV
Trigger: AACCACAAAAGAACCAAACGCTTTCTGTCCTACCCACGGTTTGTAGAGGTGATGGTGGTGGCTGACCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp GTGACCAAGCACTCTGACCAGTCTCCTGTTTTCCAATaGGGACAGGAGAACTCATTGCAGCTCTGTACTACG +
Preference number: 6 (lower is better)
Translates to: VTKHSDQSPVFQ*GQENSLQLCTT
Trigger: CGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGACTGGTCAGAGTGCTTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GCATTTCTCCTTGGTTCCAGAGCCAGTATGGAAGGGTaGCAAGATGCTAATTCACAGTCCTGGGTGTCGGTT +
Preference number: 6 (lower is better)
Translates to: AFLLGSRASMEG*QDANSQSWVSV
Trigger: AACCGACACCCAGGACTGTGAATTAGCATCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp TTCCACTGTCCACAGGGTGTCACAGAACACTCTTCCTaGGCTACTGGTTTAGGTAAGGTAGCACAGGCACTC +
Preference number: 6 (lower is better)
Translates to: FHCPQGVTEHSS*ATGLGKVAQAL
Trigger: GAGTGCCTGTGCTACCTTACCTAAACCAGTAGCCAAGGAAGAGTGTTCTGTGACACCCTGTGGACAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp CAAGCATGTGTGTTGCACTGCTCACGGTCAGTAGGTTaGTCCAGGACTTCACAACTCAAGTCTGGGAATCGG +
Preference number: 6 (lower is better)
Translates to: QACVLHCSRSVG*SRTSQLKSGNR
Trigger: CCGATTCCCAGACTTGAGTTGTGAAGTCCTGGACAAACCTACTGACCGTGAGCAGTGCAACACACATGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp CACTCTGACCAGTCTCCTGTTTTCCAATGGGGACAGGAGAACTCATaGCAGCTCTGTACTACGACTTTCTCCTGGTGTGTGCATTTGCTG +
Preference number: 6 (lower is better)
Translates to: HSDQSPVFQWGQENS*QLCTTTFSWCVHLL
Trigger: CAGCAAATGCACACACCAGGAGAAAGTCGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGACTGGTCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp ACCCAAATCGCCACTGGGTTCTCGGTATACTCTGTGCATTTCTCCTaGGTTCCAGAGCCAGTATGGAAGGGTGGCAAGATGCTAATTCAC +
Preference number: 6 (lower is better)
Translates to: TQIATGFSVYSVHFS*VPEPVWKGGKMLIH
Trigger: GTGAATTAGCATCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTATACCGAGAACCCAGTGGCGATTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp CTCACTTCGATCAATCACATGGTCGCTGTAGTTGACACACACTACTaGTCGGGTTGCCTTACCTTGCCCACAAGTCACGGAACAAGAGCT +
Preference number: 6 (lower is better)
Translates to: LTSINHMVAVVDTHY*SGCLTLPTSHGTRA
Trigger: AGCTCTTGTTCCGTGACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAACTACAGCGACCATGTGATTGATCGAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp GGCAATGGCAGTCATCTCGCCGGCTCCCATTATAGGGACATTCTGTaGGGTTGTGCAATCTGTGACCATAAACTTCGGAGAAGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: GNGSHLAGSHYRDIL*GCAICDHKLRRSSL
Trigger: CAGAGAACTTCTCCGAAGTTTATGGTCACAGATTGCACAACCCAACAGAATGTCCCTATAATGGGAGCCGGCGAGATGACTGCCATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CATCCTCTTGCTCATCCACAGACTGCAGTGGTTCAATaGAATAATCTCCATCGTGAGAGCGGAACGTGCCCA +
Preference number: 6 (lower is better)
Translates to: HPLAHPQTAVVQ*NNLHRESGTCP
Trigger: TGGGCACGTTCCGCTCTCACGATGGAGATTATTTCATTGAACCACTGCAGTCTGTGGATGAGCAAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 72 bp AGCAGACCATTGATGTTGAAGTGTTTGCCATCAAAGTaGGCACACTGCTCCTCTCGGAAGTCTCGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRPLMLKCLPSK*AHCSSRKSRFC
Trigger: GCAGAAGCGAGACTTCCGAGAGGAGCAGTGTGCTCACTTTGATGGCAAACACTTCAACATCAATGGTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp TCACACATTCTATCGCTTAATCGATCTTCGCCAAACTaGCACCAGACCTGGCGGTGCTTATGCCCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: SHILSLNRSSPN*HQTWRCLCPFP
Trigger: TGGGAAAGGGCATAAGCACCGCCAGGTCTGGTGTCAGTTTGGCGAAGATCGATTAAGCGATAGAATGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp AACTGTCATCCACCTTCTCCGTCTTCCCGTCCATCCTaGTGTATTTGGCACAGTGGATGTCTAAAGTACGGT +
Preference number: 6 (lower is better)
Translates to: NCHPPSPSSRPS*CIWHSGCLKYG
Trigger: ACCGTACTTTAGACATCCACTGTGCCAAATACAGCAGGATGGACGGGAAGACGGAGAAGGTGGATGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp AGTCTCCTGTTTTCCAATGGGGACAGGAGAACTCATTaGAGCTCTGTACTACGACTTTCTCCTGGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: SLLFSNGDRRTH*SSVLRLSPGVC
Trigger: GCACACACCAGGAGAAAGTCGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CATGCAGCATCTTGTGGACAAGCATGTGTGTTGCACTaGTCACGGTCAGTAGGTTTGTCCAGGACTTCACAA +
Preference number: 6 (lower is better)
Translates to: HAASCGQACVLH*SRSVGLSRTSQ
Trigger: TTGTGAAGTCCTGGACAAACCTACTGACCGTGAGCAGTGCAACACACATGCTTGTCCACAAGATGCTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp AGGGTGACAGTGAACAGTGGAGCGATAAATCCGGTATaGGCGGTGAGATTAAATAGAAACTGCTGGCCGAAG +
Preference number: 6 (lower is better)
Translates to: RVTVNSGAINPV*AVRLNRNCWPK
Trigger: CTTCGGCCAGCAGTTTCTATTTAATCTCACCGCCCATACCGGATTTATCGCTCCACTGTTCACTGTCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp ATCTTTGATCAGAAACGGTTAGCTGATCAGACTCCCTaGTGCAAACAAGTTTTCGTCTCCGCTCCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: IFDQKRLADQTP*CKQVFVSAPLG
Trigger: GCCAAGGGGAGCGGAGACGAAAACTTGTTTGCACCAGGGAGTCTGATCAGCTAACCGTTTCTGATCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TACTCTGTGCATTTCTCCTTGGTTCCAGAGCCAGTATaGAAGGGTGGCAAGATGCTAATTCACAGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: YSVHFSLVPEPV*KGGKMLIHSPG
Trigger: CCCAGGACTGTGAATTAGCATCTTGCCACCCTTCCATACTGGCTCTGGAACCAAGGAGAAATGCACAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TGTCCGAAACAGCGTAATTCCCTTGTGACGTCCATCTaGCAGACTCCGTTAAAGACAGCCCAGTCCCATAAA +
Preference number: 6 (lower is better)
Translates to: CPKQRNSLVTSI*QTPLKTAQSHK
Trigger: TTTATGGGACTGGGCTGTCTTTAACGGAGTCTGCCAGATGGACGTCACAAGGGAATTACGCTGTTTCGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp ACATTGTTTATTCACGTTGTAGAGAAGGCCGGGCAGTaGGGAAGGCAAAGGATAGGTCCTGGATGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: TLFIHVVEKAGQ*GRQRIGPGCRF
Trigger: GAACCTGCATCCAGGACCTATCCTTTGCCTTCCCAACTGCCCGGCCTTCTCTACAACGTGAATAAACAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp CCAGAGCCGTCTGCACTGCATCATATAGGGGCACACTaGAGAGCCTGGCCCAAAAATCAGTTCACATTGTTT +
Preference number: 6 (lower is better)
Translates to: PEPSALHHIGAH*RAWPKNQFTLF
Trigger: AAACAATGTGAACTGATTTTTGGGCCAGGCTCTCAAGTGTGCCCCTATATGATGCAGTGCAGACGGCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp CGCTTCTGCTTCATGCAGGGCTCCGTGTTGCAGGATTaGAACTTCATTCTCCTTCCTACACAGTACTTCCCA +
Preference number: 6 (lower is better)
Translates to: RFCFMQGSVLQD*NFILLPTQYFP
Trigger: TGGGAAGTACTGTGTAGGAAGGAGAATGAAGTTCAAATCCTGCAACACGGAGCCCTGCATGAAGCAGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp CAGCTCTGTACTACGACTTTCTCCTGGTGTGTGCATTaGCTGTCATCCAGGACATCATTGCGGGTGTTGACA +
Preference number: 6 (lower is better)
Translates to: QLCTTTFSWCVH*LSSRTSLRVLT
Trigger: TGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGAGAAAGTCGTAGTACAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp CAGTCTCCTGTTTTCCAATGGGGACAGGAGAACTCATaGCAGCTCTGTACTACGACTTTCTCCTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: QSPVFQWGQENS*QLCTTTFSWCV
Trigger: CACACACCAGGAGAAAGTCGTAGTACAGAGCTGCAATGAGTTCTCCTGTCCCCATTGGAAAACAGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp ATCAATCACATGGTCGCTGTAGTTGACACACACTACTaGTCGGGTTGCCTTACCTTGCCCACAAGTCACGGA +
Preference number: 6 (lower is better)
Translates to: INHMVAVVDTHY*SGCLTLPTSHG
Trigger: TCCGTGACTTGTGGGCAAGGTAAGGCAACCCGACAAGTAGTGTGTGTCAACTACAGCGACCATGTGATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp CACGGGCCAGATTCACAGGCTCTCTGTTCATCAGGTTaGATTCTCTCTACACAGTCATTGGCTGTGTATCCG +
Preference number: 6 (lower is better)
Translates to: HGPDSQALCSSG*ILSTQSLAVYP
Trigger: CGGATACACAGCCAATGACTGTGTAGAGAGAATCAAACCTGATGAACAGAGAGCCTGTGAATCTGGCCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp CATATAGGGGCACACTTGAGAGCCTGGCCCAAAAATCAGTTCACATaGTTTATTCACGTTGTAGAGAAGGCCGGGCAGTTGGGAAGGCAA +
Preference number: 6 (lower is better)
Translates to: HIGAHLRAWPKNQFT*FIHVVEKAGQLGRQ
Trigger: TTGCCTTCCCAACTGCCCGGCCTTCTCTACAACGTGAATAAACAATGTGAACTGATTTTTGGGCCAGGCTCTCAAGTGTGCCCCTATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 90 bp TCCTGGTGTGTGCATTTGCTGTCATCCAGGACATCATTGCGGGTGTaGACACAAATTGCTCTTCTTCTCTGGGTACCACCATCACAGCTT +
Preference number: 6 (lower is better)
Translates to: SWCVHLLSSRTSLRV*TQIALLLWVPPSQL
Trigger: AAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp ACGACTTTCTCCTGGTGTGTGCATTTGCTGTCATCCAGGACATCATaGCGGGTGTTGACACAAATTGCTCTTCTTCTCTGGGTACCACCA +
Preference number: 6 (lower is better)
Translates to: TTFSWCVHLLSSRTS*RVLTQIALLLWVPP
Trigger: TGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGAGAAAGTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp CATTGGGGACACGGGCCAGATTCACAGGCTCTCTGTTCATCAGGTTaGATTCTCTCTACACAGTCATTGGCTGTGTATCCGTTTTCATCC +
Preference number: 6 (lower is better)
Translates to: HWGHGPDSQALCSSG*ILSTQSLAVYPFSS
Trigger: GGATGAAAACGGATACACAGCCAATGACTGTGTAGAGAGAATCAAACCTGATGAACAGAGAGCCTGTGAATCTGGCCCGTGTCCCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp AGTCATTGTCATCGACCACTGACATATAAGTCCCCATaGTGCACTTCACTGCCCTTAGCTGGTATCCCTGTC +
Preference number: 6 (lower is better)
Translates to: SHCHRPLTYKSP*CTSLPLAGIPV
Trigger: GACAGGGATACCAGCTAAGGGCAGTGAAGTGCATCATGGGGACTTATATGTCAGTGGTCGATGACAATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp CCTAGTTGCTGCGTTACAGTCATTGTCATCGACCACTaGCATATAAGTCCCCATGATGCACTTCACTGCCCT +
Preference number: 6 (lower is better)
Translates to: PSCCVTVIVIDH*HISPHDALHCP
Trigger: AGGGCAGTGAAGTGCATCATGGGGACTTATATGTCAGTGGTCGATGACAATGACTGTAACGCAGCAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp AGCGTTTGGTTCTTTTGTGGTTCCATCTGTCCCTTGTaGTGTTTGTCTGGTTGCTATAGCCAGAGAGCACCT +
Preference number: 6 (lower is better)
Translates to: SVWFFCGSICPL*CLSGCYSQRAP
Trigger: AGGTGCTCTCTGGCTATAGCAACCAGACAAACAGCACAAGGGACAGATGGAACCACAAAAGAACCAAACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp GTCATCCAGGACATCATTGCGGGTGTTGACACAAATTaGTCTTCTTCTCTGGGTACCACCATCACAGCTTCT +
Preference number: 6 (lower is better)
Translates to: VIQDIIAGVDTN*SSSLGTTITAS
Trigger: AGAAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TCACCTCTACAAACCGTGGGTAGGACAGAAAGCGTTTaGTTCTTTTGTGGTTCCATCTGTCCCTTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: SPLQTVGRTESV*FFCGSICPLCC
Trigger: ACAGCACAAGGGACAGATGGAACCACAAAAGAACCAAACGCTTTCTGTCCTACCCACGGTTTGTAGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp TCTCTGAGTCACCGTGAGCCAGTGTCACATACTCCTTaGGATAGTCAGAATTCATCCCTGCACAGAATACCT +
Preference number: 6 (lower is better)
Translates to: SLSHREPVSHTP*DSQNSSLHRIP
Trigger: AGGTATTCTGTGCAGGGATGAATTCTGACTATCCCAAGGAGTATGTGACACTGGCTCACGGTGACTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp GTCATCTCGCCGGCTCCCATTATAGGGACATTCTGTTaGGTTGTGCAATCTGTGACCATAAACTTCGGAGAA +
Preference number: 6 (lower is better)
Translates to: VISPAPIIGTFC*VVQSVTINFGE
Trigger: TTCTCCGAAGTTTATGGTCACAGATTGCACAACCCAACAGAATGTCCCTATAATGGGAGCCGGCGAGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp GCACACTTGAGAGCCTGGCCCAAAAATCAGTTCACATaGTTTATTCACGTTGTAGAGAAGGCCGGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: AHLRAWPKNQFT*FIHVVEKAGQL
Trigger: CAACTGCCCGGCCTTCTCTACAACGTGAATAAACAATGTGAACTGATTTTTGGGCCAGGCTCTCAAGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp CCCCAGGATCCATCAATTGCAGGGCCCTCCATTTCTTaGGGAACACAAAATCCAAACTTGCAGTGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: PQDPSIAGPSIS*GTQNPNLQCFP
Trigger: TGGAAAGCACTGCAAGTTTGGATTTTGTGTTCCCAAAGAAATGGAGGGCCCTGCAATTGATGGATCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp GTGCATTTGCTGTCATCCAGGACATCATTGCGGGTGTaGACACAAATTGCTCTTCTTCTCTGGGTACCACCA +
Preference number: 6 (lower is better)
Translates to: VHLLSSRTSLRV*TQIALLLWVPP
Trigger: TGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp TCCTGGTGTGTGCATTTGCTGTCATCCAGGACATCATaGCGGGTGTTGACACAAATTGCTCTTCTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: SWCVHLLSSRTS*RVLTQIALLLW
Trigger: CCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp AGTCATCTCGCCGGCTCCCATTATAGGGACATTCTGTaGGGTTGTGCAATCTGTGACCATAAACTTCGGAGA +
Preference number: 6 (lower is better)
Translates to: SHLAGSHYRDIL*GCAICDHKLRR
Trigger: TCTCCGAAGTTTATGGTCACAGATTGCACAACCCAACAGAATGTCCCTATAATGGGAGCCGGCGAGATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp AATCAGTTCACATTGTTTATTCACGTTGTAGAGAAGGCCGGGCAGTaGGGAAGGCAAAGGATAGGTCCTGGATGCAGGTTCATTCAGCAA +
Preference number: 6 (lower is better)
Translates to: NQFTLFIHVVEKAGQ*GRQRIGPGCRFIQQ
Trigger: TTGCTGAATGAACCTGCATCCAGGACCTATCCTTTGCCTTCCCAACTGCCCGGCCTTCTCTACAACGTGAATAAACAATGTGAACTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 90 bp AACTCATTGCAGCTCTGTACTACGACTTTCTCCTGGTGTGTGCATTaGCTGTCATCCAGGACATCATTGCGGGTGTTGACACAAATTGCT +
Preference number: 6 (lower is better)
Translates to: NSLQLCTTTFSWCVH*LSSRTSLRVLTQIA
Trigger: AGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCACACACCAGGAGAAAGTCGTAGTACAGAGCTGCAATGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp TTTCCGCTTGTCTTTACTGTGACTATTTTTGAGTTCTaGGGTGGCACAGGCATGCTTTCCTGTGGAGGGTTC +
Preference number: 6 (lower is better)
Translates to: FPLVFTVTIFEF*GGTGMLSCGGF
Trigger: GAACCCTCCACAGGAAAGCATGCCTGTGCCACCTCAGAACTCAAAAATAGTCACAGTAAAGACAAGCGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 72 bp TGCATTTGCTGTCATCCAGGACATCATTGCGGGTGTTaGCACAAATTGCTCTTCTTCTCTGGGTACCACCAT +
Preference number: 6 (lower is better)
Translates to: CICCHPGHHCGC*HKLLFFSGYHH
Trigger: ATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGATGTCCTGGATGACAGCAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp TGTATTCATAATTCTCCTTGCCGGTATAAATCTCACTaGAGGAGACCAGCCTTTGCCTGTAGCCCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: CIHNSPCRYKSH*RRPAFACSPFH
Trigger: GTGGAAAGGGCTACAGGCAAAGGCTGGTCTCCTGCAGTGAGATTTATACCGGCAAGGAGAATTATGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp GGTTGGTCTTCATTAGTTAAACACTGCACAGATCTATaGATGACTCCTATGCCGCAGGACACTGAGCAACTG +
Preference number: 6 (lower is better)
Translates to: GWSSLVKHCTDL*MTPMPQDTEQL
Trigger: CAGTTGCTCAGTGTCCTGCGGCATAGGAGTCATGCATAGATCTGTGCAGTGTTTAACTAATGAAGACCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CATAAGTGGCTGGGTTGGTCTTCATTAGTTAAACACTaGACAGATCTATGCATGACTCCTATGCCGCAGGAC +
Preference number: 6 (lower is better)
Translates to: HKWLGWSSLVKH*TDLCMTPMPQD
Trigger: GTCCTGCGGCATAGGAGTCATGCATAGATCTGTGCAGTGTTTAACTAATGAAGACCAACCCAGCCACTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS GCA 72 bp CCTTGCAGTTCTGGGGTAGCTCACAGTTATAAACATTaGGGCAGGCTTTTCTTTCTTCTGGCTTCGTATCAG +
Preference number: 6 (lower is better)
Translates to: PCSSGVAHSYKH*GRLFFLLASYQ
Trigger: CTGATACGAAGCCAGAAGAAAGAAAAGCCTGCCGCAATGTTTATAACTGTGAGCTACCCCAGAACTGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TCATTGCGGGTGTTGACACAAATTGCTCTTCTTCTCTaGGTACCACCATCACAGCTTCTAGAACATTCGGTC +
Preference number: 6 (lower is better)
Translates to: SLRVLTQIALLL*VPPSQLLEHSV
Trigger: GACCGAATGTTCTAGAAGCTGTGATGGTGGTACCCAGAGAAGAAGAGCAATTTGTGTCAACACCCGCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 72 bp TGGTTCTTTTGTGGTTCCATCTGTCCCTTGTGCTGTTaGTCTGGTTGCTATAGCCAGAGAGCACCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: WFFCGSICPLCC*SGCYSQRAPLL
Trigger: CAACAAAGGTGCTCTCTGGCTATAGCAACCAGACAAACAGCACAAGGGACAGATGGAACCACAAAAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS TCA 72 bp CCACATTTATCTTTCCGGGCCTTTGAGTTTAAAATATaGTCACATCCAGCTTGCCGGCAAAGGCCTTGGACA +
Preference number: 6 (lower is better)
Translates to: PHLSFRAFEFKI*SHPACRQRPWT
Trigger: TGTCCAAGGCCTTTGCCGGCAAGCTGGATGTGATCATATTTTAAACTCAAAGGCCCGGAAAGATAAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TTCCTCTTCATCCTCTTGCTCATCCACAGACTGCAGTaGTTCAATGAAATAATCTCCATCGTGAGAGCGGAA +
Preference number: 6 (lower is better)
Translates to: FLFILLLIHRLQ*FNEIISIVRAE
Trigger: TTCCGCTCTCACGATGGAGATTATTTCATTGAACCACTGCAGTCTGTGGATGAGCAAGAGGATGAAGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS GCA 72 bp TCACTGTGGTTTGGTAGCTGTATTCATAATTCTCCTTaGCGGTATAAATCTCACTGCAGGAGACCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: SLWFGSCIHNSP*RYKSHCRRPAF
Trigger: AAAGGCTGGTCTCCTGCAGTGAGATTTATACCGGCAAGGAGAATTATGAATACAGCTACCAAACCACAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CCA 72 bp TCTGCACTGCATCATATAGGGGCACACTTGAGAGCCTaGCCCAAAAATCAGTTCACATTGTTTATTCACGTT +
Preference number: 6 (lower is better)
Translates to: SALHHIGAHLRA*PKNQFTLFIHV
Trigger: AACGTGAATAAACAATGTGAACTGATTTTTGGGCCAGGCTCTCAAGTGTGCCCCTATATGATGCAGTGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CCA 72 bp TTTCTTTCTTCTGGCTTCGTATCAGTGGGGCATAAGTaGCTGGGTTGGTCTTCATTAGTTAAACACTGCACA +
Preference number: 6 (lower is better)
Translates to: FLSSGFVSVGHK*LGWSSLVKHCT
Trigger: TGTGCAGTGTTTAACTAATGAAGACCAACCCAGCCACTTATGCCCCACTGATACGAAGCCAGAAGAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS TCA 72 bp AAATTGCTGAGGTTTGTCCTCAATGGGAATATTGAATaGGTACCGCACATCTGGGTTATACAGCTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: KLLRFVLNGNIE*VPHIWVIQLSH
Trigger: GTGGGAAAGCTGTATAACCCAGATGTGCGGTACTCATTCAATATTCCCATTGAGGACAAACCTCAGCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp TGGAGACAACAAAGTCTCCATTTAGCAGGAATTCACCTTTACTGTTaGATAAAGCTAGGTAGTTGTCATCCTCAGACTTCCCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: WRQQSLHLAGIHLYC*IKLGSCHPQTSLRS
Trigger: GCTTCTCAGGGAAGTCTGAGGATGACAACTACCTAGCTTTATCAAACAGTAAAGGTGAATTCCTGCTAAATGGAGACTTTGTTGTCTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2
CDS CAA 90 bp GTGCCTATAAATAATGTGGGGTTTGTTTTGTTCCTCTTCATCCTCTaGCTCATCCACAGACTGCAGTGGTTCAATGAAATAATCTCCATC +
Preference number: 6 (lower is better)
Translates to: VPINNVGFVLFLFIL*LIHRLQWFNEIISI
Trigger: GATGGAGATTATTTCATTGAACCACTGCAGTCTGTGGATGAGCAAGAGGATGAAGAGGAACAAAACAAACCCCACATTATTTATAGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp CAATGGACATTAAGGTTAAGATATAATGTTGAAGGTTaGCTCCGTGGTATAAAACCATCCTGTGGTCAGCCA +
Preference number: 6 (lower is better)
Translates to: QWTLRLRYNVEG*LRGIKPSCGQP
Trigger: TGGCTGACCACAGGATGGTTTTATACCACGGAGCAAACCTTCAACATTATATCTTAACCTTAATGTCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000113438.8
CDS CAA 72 bp GCTTACAGTTATCACTCTCTAAATGGCTTCCATCTTTaGCCAAGCAGTAAACATTTCGATGTTTATGCCCTC +
Preference number: 6 (lower is better)
Translates to: AYSYHSLNGFHL*PSSKHFDVYAL
Trigger: GAGGGCATAAACATCGAAATGTTTACTGCTTGGCAAAAGATGGAAGCCATTTAGAGAGTGATAACTGTAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113438.8
ENSMUST00000167391.2