RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046169

Ensembl transcript IDs: ENSMUST00000065766.7, ENSMUST00000223562.2, ENSMUST00000224208.2, ENSMUST00000224303.2, ENSMUST00000224504.2, ENSMUST00000224742.2, ENSMUST00000224784.2

Found 723 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACAGCGCGGAGTAGGTTTTGCTCCCACACTGCCAGCTGTGGGCTaGCTAGTGGGTGTCTTACCTCCAGCACAAGTAGCAGAGCACTCC +
Preference number: 1 (lower is better)
Translates to: TQRGVGFAPTLPAVG*LVGVLPPAQVAEHS
Trigger: GGAGTGCTCTGCTACTTGTGCTGGAGGTAAGACACCCACTAGGCAGCCCACAGCTGGCAGTGTGGGAGCAAAACCTACTCCGCGCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR GCA 90 bp CACGAAGGAGTCTCGGTGACTCAAATAAGGCATCCCACTGACGGCTaGAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGC +
Preference number: 1 (lower is better)
Translates to: HEGVSVTQIRHPTDG*KGLVLQSLPCLRSG
Trigger: GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCTTATTTGAGTCACCGAGACTCCTTCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp CGGACCAGTCCAAAGCTACCCACTGAGGTGGACATGACTGGTTGTTaGAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGT +
Preference number: 1 (lower is better)
Translates to: RTSPKLPTEVDMTGC*RTLSPQAGVLSSRR
Trigger: ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGACTGGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp GCGGCCCAGACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTaGACATTGTGCAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTT +
Preference number: 1 (lower is better)
Translates to: AAQTAADASRRLALL*TLCSWECFRKVTAL
Trigger: AAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGTCTGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp GGCCAGGCTCCCATGTGTTGCCTTCCTTTAGTGGAATGGCTGGGATaGTACTTAGGCTGGTCTTCTCAGGGCAGTCAGATGGAGGGCTTG +
Preference number: 1 (lower is better)
Translates to: GQAPMCCLPLVEWLG*YLGWSSQGSQMEGL
Trigger: CAAGCCCTCCATCTGACTGCCCTGAGAAGACCAGCCTAAGTACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 90 bp TGGAAGGCCGTGCTCCCCTCAGCAGTAGCCTGTCCACTGTGCCAATaGACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGT +
Preference number: 1 (lower is better)
Translates to: WKAVLPSAVACPLCQ*TSWREHRLISYPSS
Trigger: ACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGCTGAGGGGAGCACGGCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 90 bp GGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATGGATaGAGGCCGGACAGTTTCTGGACAGTCAACAGACGCCTGTCCAGT +
Preference number: 1 (lower is better)
Translates to: GERGAITFAVTLLHG*RPDSFWTVNRRLSS
Trigger: ACTGGACAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp AGCCAGCTTATCTTTCCGCATGGCATCATCTCCATAAGCTCACCATaGATGCAACAGCCGAGCAGGGCAGAAGCTGATCTGTGGCTGGTG +
Preference number: 1 (lower is better)
Translates to: SQLIFPHGIISISSP*MQQPSRAEADLWLV
Trigger: CACCAGCCACAGATCAGCTTCTGCCCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAAGATAAGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp TCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTaGATGGATGGAGGCCGGACAGTTTCTGGACAGTCAACAGACGCC +
Preference number: 1 (lower is better)
Translates to: SVLERGVLSHLLSHC*MDGGRTVSGQSTDA
Trigger: GGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp CACCATGCATGCAACAGCCGAGCAGGGCAGAAGCTGATCTGTGGCTaGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAATAAGG +
Preference number: 1 (lower is better)
Translates to: HHACNSRAGQKLICG*WGCKHEGVSVTQIR
Trigger: CCTTATTTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTCGGCTGTTGCATGCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp TACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATaGATGGAGGCCGGACAGTTTCTGGACAGTCAACAGACGCCTGTC +
Preference number: 1 (lower is better)
Translates to: YWREGCYHICCHTAA*MEAGQFLDSQQTPV
Trigger: GACAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp TCAAGTCTGGGCCAGGCTCCCATGTGTTGCCTTCCTTTAGTGGAATaGCTGGGATGGTACTTAGGCTGGTCTTCTCAGGGCAGTCAGATG +
Preference number: 1 (lower is better)
Translates to: SSLGQAPMCCLPLVE*LGWYLGWSSQGSQM
Trigger: CATCTGACTGCCCTGAGAAGACCAGCCTAAGTACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 90 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAAC +
Preference number: 1 (lower is better)
Translates to: TAADASRRLALLWTL*SWECFRKVTALAQN
Trigger: GTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp CATGCATGCAACAGCCGAGCAGGGCAGAAGCTGATCTGTGGCTGGTaGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAATAAGGCAT +
Preference number: 1 (lower is better)
Translates to: HACNSRAGQKLICGW*GCKHEGVSVTQIRH
Trigger: ATGCCTTATTTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTCGGCTGTTGCATGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp GCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTaGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCG +
Preference number: 1 (lower is better)
Translates to: ADASRRLALLWTLCS*ECFRKVTALAQNNP
Trigger: CGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp ACATTTGCTGTCACACTGCTGCATGGATGGAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTGTCCAGTATAGGAAAGGCACTGGAC +
Preference number: 1 (lower is better)
Translates to: TFAVTLLHGWRPDSF*TVNRRLSSIGKALD
Trigger: GTCCAGTGCCTTTCCTATACTGGACAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp TTCCTCTGGGTGGTTCTCTTTGATGGACGCATTTCCACGATGAAATaGCAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGGCAGGT +
Preference number: 1 (lower is better)
Translates to: FLWVVLFDGRISTMK*QDSLAFCGSVSLAG
Trigger: ACCTGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGTCATTTCATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp TCCACTTCCTCTGGGTGGTTCTCTTTGATGGACGCATTTCCACGATaGAATGACAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: STSSGWFSLMDAFPR*NDRTLWLSAGQCPW
Trigger: CCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGTCATTTCATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp TCTTCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTaGTGCATGGATGGAGGCCGGACAGTTTCTGGACAGTCAACAGAC +
Preference number: 1 (lower is better)
Translates to: SSVLERGVLSHLLSH*CMDGGRTVSGQSTD
Trigger: GTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp CATCTTTGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCACATTTaGTGTCACACTGCTGCATGGATGGAGGCCGGACAGTTTCTGGAC +
Preference number: 1 (lower is better)
Translates to: HLCTLQYWREGCYHI*CHTAAWMEAGQFLD
Trigger: GTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp GAAAAGGACCAAGGGAATTCAAGTCTGGGCCAGGCTCCCATGTGTTaGCTTCCTTTAGTGGAATGGCTGGGATGGTACTTAGGCTGGTCT +
Preference number: 1 (lower is better)
Translates to: EKDQGNSSLGQAPMC*LPLVEWLGWYLGWS
Trigger: AGACCAGCCTAAGTACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGACTTGAATTCCCTTGGTCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 90 bp GCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTaGAGTAGCAGTGGCATTGTAATGTGTTATGGAAGATGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: ASAADPTVTTEDRDG*SSSGIVMCYGRCSS
Trigger: TGAAGAGCATCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 90 bp CCCTTTCTCAATATTCCCAGTCTGACACAGTGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACAGCGGTTGCTTTTGCTGAGGCACCA +
Preference number: 1 (lower is better)
Translates to: PFLNIPSLTQCPLSS*NTVGDTAVAFAEAP
Trigger: TGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACACTGTGTCAGACTGGGAATATTGAGAAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp CTTGTCTTTGGACACCAGTCCATGAAGCAGCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGTAAAGAAT +
Preference number: 1 (lower is better)
Translates to: LVFGHQSMKQQGCWL*RKPTVLLSQPEVKN
Trigger: ATTCTTTACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTCATGGACTGGTGTCCAAAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp GAACCACATTTAGGAGTACATTCGGACCAGTCCAAAGCTACCCACTaGGGTGGACATGACTGGTTGTTGCAGGACTCTTTCTCCACAGGC +
Preference number: 1 (lower is better)
Translates to: EPHLGVHSDQSKATH*GGHDWLLQDSFSTG
Trigger: GCCTGTGGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGACTGGTCCGAATGTACTCCTAAATGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp CACGCTTTGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTaGAAAGCCGTCTTCGGAAAACATCAGAAGCTGGCAAAACACGTC +
Preference number: 1 (lower is better)
Translates to: HALEAHYQGKYHGLN*KAVFGKHQKLAKHV
Trigger: GACGTGTTTTGCCAGCTTCTGATGTTTTCCGAAGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp TCAATTAGCTTCTTTAGCAAACAAAACACAGCGCGGAGTAGGTTTTaGTCCCACACTGCCAGCTGTGGGCTGCCTAGTGGGTGTCTTACC +
Preference number: 1 (lower is better)
Translates to: SISFFSKQNTARSRF*SHTASCGLPSGCLT
Trigger: GGTAAGACACCCACTAGGCAGCCCACAGCTGGCAGTGTGGGAGCAAAACCTACTCCGCGCTGTGTTTTGTTTGCTAAAGAAGCTAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR TCA 90 bp GCTGTGTGTACGGGGCACATACGTGAAGGACTAAGGAGGTGTGCTTaGCACAAAGCACATTCACCAACAACCTACTACACGCTACAAGTG +
Preference number: 1 (lower is better)
Translates to: AVCTGHIREGLRRCA*HKAHSPTTYYTLQV
Trigger: CACTTGTAGCGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGTCCTTCACGTATGTGCCCCGTACACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 90 bp CATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATaGCTTAGGTCTGGCTTCTGCATGAAATTGAAATGTTTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: HPTDGCKGLVLQSLP*LRSGFCMKLKCFSL
Trigger: AAGAGAAAAACATTTCAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp GGGTCAGTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAACTTCAGCACCAGTGGGCAATAAGC +
Preference number: 1 (lower is better)
Translates to: GSVSLAGLTTHLSEV*STAELELQHQWAIS
Trigger: GCTTATTGCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACACTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp AAAGTCACGCTTTGGAGGCTCATTATCAAGGCAAGTACCACGGCCTaGACTGCAAAGCCGTCTTCGGAAAACATCAGAAGCTGGCAAAAC +
Preference number: 1 (lower is better)
Translates to: KVTLWRLIIKASTTA*TAKPSSENIRSWQN
Trigger: GTTTTGCCAGCTTCTGATGTTTTCCGAAGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp GTATCTGAACCACTTCCATATAACCTCCTCTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCATCACAGGTGCTTCCATCCCCACCAC +
Preference number: 1 (lower is better)
Translates to: VSEPLPYNLLWAMSH*RTLQWHHRCFHPHH
Trigger: GTGGTGGGGATGGAAGCACCTGTGATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCAGAGGAGGTTATATGGAAGTGGTTCAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp GAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: ERTQTLHSKQVSCVV*ISQIWQSLLIPCPA
Trigger: TGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp CCAGAGCTCTCTACACACTTCCCCATATTTGCATTGGCGGGATGTTaGTCCATACTGGAAACGACATTGTTCATCAGCATCATACACCTG +
Preference number: 1 (lower is better)
Translates to: PELSTHFPIFALAGC*SILETTLFISIIHL
Trigger: CAGGTGTATGATGCTGATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGGGAAGTGTGTAGAGAGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 90 bp ACGACATTGTTCATCAGCATCATACACCTGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTTTGGAGGCTCATTATCAAGGCAAGT +
Preference number: 1 (lower is better)
Translates to: TTLFISIIHLTWGHS*IKKVTLWRLIIKAS
Trigger: ACTTGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAACAATGTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp TGCTTTTGTAAGGACATCCATCCACTTCCTCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGATGAAATGACAGGACTCTCTGGCTTT +
Preference number: 1 (lower is better)
Translates to: CFCKDIHPLPLGGSL*WTHFHDEMTGLSGF
Trigger: AAAGCCAGAGAGTCCTGTCATTTCATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGATGTCCTTACAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp AAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTTGGATCAATAAATCCCACTTCACAG +
Preference number: 1 (lower is better)
Translates to: KFPVLFGSLRSGSPS*YRVQHFGSINPTSQ
Trigger: CTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp AGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGAATCCTaGACCACATTTAGGAGTACATTCGGACCAGTCCAAAGCTACCCA +
Preference number: 1 (lower is better)
Translates to: RKVTALAQNNPMLES*TTFRSTFGPVQSYP
Trigger: TGGGTAGCTTTGGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 90 bp GAACCCTTAAACAATCTAGTTGTTGAATCTTTTGATGGCAACGTGTaGAGCGTGAAGGTGGGAAGGCCCACGCGAGTCATTTCAGTTCTG +
Preference number: 1 (lower is better)
Translates to: EPLNNLVVESFDGNV*SVKVGRPTRVISVL
Trigger: CAGAACTGAAATGACTCGCGTGGGCCTTCCCACCTTCACGCTTCACACGTTGCCATCAAAAGATTCAACAACTAGATTGTTTAAGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR TCA 90 bp TCCTATATTTTACCAGGGCACATTAGCACCAAGTTAACTGTCCTTTaGAAAGGACCAAGGGAATTCAAGTCTGGGCCAGGCTCCCATGTG +
Preference number: 1 (lower is better)
Translates to: SYILPGHISTKLTVL*KGPREFKSGPGSHV
Trigger: CACATGGGAGCCTGGCCCAGACTTGAATTCCCTTGGTCCTTTTCAAAGGACAGTTAACTTGGTGCTAATGTGCCCTGGTAAAATATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 90 bp GCAGGCAGACCAGGAGAAGGGATTGGTATTTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTCATGACCTTTCGTCCCACAAGAATT +
Preference number: 1 (lower is better)
Translates to: AGRPGEGIGICSNMS*HKFCCLMTFRPTRI
Trigger: AATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGGTCTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR GCA 90 bp GATGTAGTCTCTGCTGCAGGCAGACCAGGAGAAGGGATTGGTATTTaGAGTAATATGAGCTGCCATAAGTTTTGCTGCCTCATGACCTTT +
Preference number: 1 (lower is better)
Translates to: DVVSAAGRPGEGIGI*SNMSCHKFCCLMTF
Trigger: AAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGGTCTGCCTGCAGCAGAGACTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR CCA 90 bp CTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTaGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCAATAAA +
Preference number: 1 (lower is better)
Translates to: LHSKQVSCVVWISQI*QSLLIPCPALWINK
Trigger: TTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp GGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATaGTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCC +
Preference number: 1 (lower is better)
Translates to: GNVLERSLLLHRTIR*LNPEPHLGVHSDQS
Trigger: GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp CAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCAATTaGTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATAGAGTTT +
Preference number: 1 (lower is better)
Translates to: QTLSTEFIDLHSCSN*CAASNQVPHCLIEF
Trigger: AAACTCTATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp GGAGAAGGGATTGGTATTTGCAGTAATATGAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATC +
Preference number: 1 (lower is better)
Translates to: GEGIGICSNMSCHKF*CLMTFRPTRISNSI
Trigger: GATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR GCA 90 bp ACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCAATTGCTaGGCAGCTTCAAACCAAGTCCCTCACTGTTTAATAGAGTTTATA +
Preference number: 1 (lower is better)
Translates to: TLSTEFIDLHSCSNC*AASNQVPHCLIEFI
Trigger: TATAAACTCTATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp GAAGGGATTGGTATTTGCAGTAATATGAGCTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATCATG +
Preference number: 1 (lower is better)
Translates to: EGIGICSNMSCHKFC*LMTFRPTRISNSIM
Trigger: CATGATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR CCA 90 bp TCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCATTTTCTaGAATGGTGTTTCCATCACTTTGGTGGGAGAGAATGGATTTCTG +
Preference number: 1 (lower is better)
Translates to: SSNKNCIIVVGNPIF*NGVSITLVGENGFL
Trigger: CAGAAATCCATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CCA 90 bp TACGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGGTGG +
Preference number: 1 (lower is better)
Translates to: YVQISYLVIRTALSW*AIPFSGMVFPSLWW
Trigger: CCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CCA 90 bp TTTCAGGTGGCTTACTGTCAGGATCACAGAAATTGTTCTGGACAATaGAGTTGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGA +
Preference number: 1 (lower is better)
Translates to: FQVAYCQDHRNCSGQ*SCHPIFYRPLLVFG
Trigger: TCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAAGCCACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 90 bp AGAGATGGCTGCAGTAGCAGTGGCATTGTAATGTGTTATGGAAGATaGTCTTCATTTTGTGTAACCTGCTCAAGTTTAAATTCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: RDGCSSSGIVMCYGR*SSFCVTCSSLNSES
Trigger: AGACTCTGAATTTAAACTTGAGCAGGTTACACAAAATGAAGAGCATCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 90 bp TTATACGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCATCACTTTGG +
Preference number: 1 (lower is better)
Translates to: LYVQISYLVIRTALS*WAIPFSGMVFPSLW
Trigger: CCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR TCA 90 bp AGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTGCGAGCAGGGCAGAAGCTaGTCTGTGGCTGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: SPASAADPTVTTEDRDGCEQGRS*SVAGGD
Trigger: ATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTC...GCAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGTCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTT +
Preference number: 2 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLSGSPS*YRVQHF
Trigger: AAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGA...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTT +
Preference number: 2 (lower is better)
Translates to: LTAARAWCFSLCHALGLASGSPS*YRVQHF
Trigger: AAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGA...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTTACGGGGCACATACGTaGAGGACTAAGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLYGAHT*RTKEVC
Trigger: GCACACCTCCTTAGTCCTTCACGTATGTGCCCCGTA...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGCTTCAGTCTCTGCCATaGCTTAGGTCTGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLLQSLP*LRSGFC
Trigger: GCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAG...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCAGCTGCAAGGGCCTGGTaGTTCAGTCTCTGCCATGCC +
Preference number: 2 (lower is better)
Translates to: EGPTFLMQSTALVRIPPSAARAW*FSLCHA
Trigger: GGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGC...TGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTCTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRLRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLLGGSL*WTHFHD
Trigger: ATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAG...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTG +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLQGCWL*RKPTVL
Trigger: CAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTG...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTGCTGCACTCCAATTGGACACCAGTCCATaGAGCAGCAAGGGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: AEHGPCAHPTITSLAALQLDTSP*SSKGVG
Trigger: GCCAACACCCTTGCTGCTTCATGGACTGGTGTCCAA...TTGGAGTGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCGCTGGGGCTGACCAGTaGTTACATTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGAGADQ*LHFPQG
Trigger: ACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGC...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGTGCACTCTTCAGTACTaGAGAGAGGGGTGCTATCAC +
Preference number: 2 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLCTLQY*REGCYH
Trigger: GTGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCA...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: LTAARAWCFSLCHALGLALGGSL*WTHFHD
Trigger: ATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAG...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCAATCTCAGCCTCCCTTaGACAATGGCAAGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGNLSLP*TMASWP
Trigger: TGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAATCTCAGCCTCCCTTaGACAATGGCAAGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLNLSLP*TMASWP
Trigger: TGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATT...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTTCCACTTCCTCTGGGTaGTTCTCTTTGATGGACGCA +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLSTSSG*FSLMDA
Trigger: TGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp CTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTaGCTGCACTCCAACCAGTCTCCAATGAACCATTCAGGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: LMQSTALVRIPPSQV*LHSNQSPMNHSGGQ
Trigger: TTGCCCACCTGAATGGTTCATTGGAGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAGGCCGTGCTCCCCTCAGCAGTAGCCTGTCCACTGTGCCAATGCACTTCCTGGCTGGAGAAGGGAGTTTaGATGGGATTGTGGGAAACA +
Preference number: 2 (lower is better)
Translates to: KAVLPSAVACPLCQCTSWLEKGV*MGLWET
Trigger: TGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAG...CCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGCTGAGGGGAGCACGGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CTCTTCAGAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCCAATGGCATCACAGGTaGTTCCATCCCCACCACAGA +
Preference number: 2 (lower is better)
Translates to: LFRRSNFPDAEHGPCAHPQWHHR*FHPHHR
Trigger: TCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTG...GGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTTGCACAATGGCAAGTTaGCCACAGACTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLCTMAS*PQTLST
Trigger: AGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCA...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp CAGACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: QTAADASRRLALLWT*CSWECFRKVTALAQ
Trigger: CTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCCCCATACCTGTCAGCTGGGGCTaGCCAGTGGTTACATTTTCC +
Preference number: 2 (lower is better)
Translates to: DTAVAFAEAPELSTHFPIPVSWG*PVVTFS
Trigger: GGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGG...TATGGGGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ATTCGGACCAGTCCAAAGCTACCCACTGAGGTGGACATGACTGGTTGTTGCAGGAGCGGTTGCTTTTGCTaGGGCACCAGAGCTCTCTAC +
Preference number: 2 (lower is better)
Translates to: IRTSPKLPTEVDMTGCCRSGCFC*GTRALY
Trigger: GTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCT...CCTGCAACAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGACTGGTCCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTGCTGCAGTAGAACCATTACAATaGGGTTCTCAGAGGTGGGTC +
Preference number: 2 (lower is better)
Translates to: PDAEHGPCAHPTITSLAAVEPLQ*GSQRWV
Trigger: GACCCACCTCTGAGAACCTCATTGTAATGGTTCTAC...TGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAACTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: PTFKIVLEKHQQRYSLCQLRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGGCCTCCCTTGCACAATaGCAAGTTGGCCACAGACTC +
Preference number: 2 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLASLAQ*QVGHRL
Trigger: GAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGC...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTGCTGCACTCCAACCAGTCTCCAATGAACCATTCAGGTGGGCAAGGCTCAGTGGCCTCCCTTGCACAATaGCAAGTTGGCCACAGACTC +
Preference number: 2 (lower is better)
Translates to: LLHSNQSPMNHSGGQGSVASLAQ*QVGHRL
Trigger: GAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGC...CACTGAGCCTTGCCCACCTGAATGGTTCATTGGAGACTGGTTGGAGTGCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp ACCACTTCTTGTCTTTGGACACCAGTCCATGAAGCAGCAAGGGTGTaGGCTTTGAAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TTSCLWTPVHEAARV*ALKEANCPALPARG
Trigger: ACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTCATGGACTGGTGTCCAAAGACAAGAAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp AGACGCCTGTCCAGTATAGGAAAGGCACTGGACAGTTCTCATTTGTaGTCCAAGACCACACTGAGCAGAGCACTGGCCCCAGTCTCCTGT +
Preference number: 2 (lower is better)
Translates to: RRLSSIGKALDSSHL*SKTTLSRALAPVSC
Trigger: ACAGGAGACTGGGGCCAGTGCTCTGCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTCCAGTGCCTTTCCTATACTGGACAGGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp AACAGACGCCTGTCCAGTATAGGAAAGGCACTGGACAGTTCTCATTaGTTGTCCAAGACCACACTGAGCAGAGCACTGGCCCCAGTCTCC +
Preference number: 2 (lower is better)
Translates to: NRRLSSIGKALDSSH*LSKTTLSRALAPVS
Trigger: GGAGACTGGGGCCAGTGCTCTGCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTCCAGTGCCTTTCCTATACTGGACAGGCGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TCTGGGCCAGGCTCCCATGTGTTGCCTTCCTTTAGTGGAATGGCTGGGATGGTACTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: SGPGSHVLPSFSGMAGMVLGGSL*WTHFHD
Trigger: ATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAG...TACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGCCTGTCAGCTGGGGCTaGCCAGTGGTTACATTTTCC +
Preference number: 2 (lower is better)
Translates to: EISASLAQWQVGHRLLALPVSWG*PVVTFS
Trigger: GGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGG...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTCCTGTCAGCTGGGGCTaGCCAGTGGTTACATTTTCC +
Preference number: 2 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTPVSWG*PVVTFS
Trigger: GGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGG...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCATCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: MEISASLAQWQVGHRLLASASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTCTTCAGTCTCTGCCATaGCTTAGGTCTGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLLQSLP*LRSGFC
Trigger: GCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAG...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAGCTGCAAGGGCCTGGTaGTTCAGTCTCTGCCATGCC +
Preference number: 2 (lower is better)
Translates to: SQMEGLTICFVSLIASSGAARAW*FSLCHA
Trigger: GGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGC...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAAACATTTGGAGTGCCTaGCAGGGCAGCCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SQMEGLTICFVSLIASSGNIWSA*QGSPAS
Trigger: GGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTT...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGGCTGGGGCTGACCAGTaGTTACATTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: FPHGIISISSPCMQQPSRAGADQ*LHFPQG
Trigger: ACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGC...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCGCTGGGGCTGACCAGTaGTTACATTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: WISQIWQSLLIPCPALWIAGADQ*LHFPQG
Trigger: ACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGC...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCATGCACAATGGCAAGTTaGCCACAGACTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: EGPTFLMQSTALVRIPPSCTMAS*PQTLST
Trigger: AGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCA...TGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 2 (lower is better)
Translates to: STSSRALRPGLISPHEANIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTG +
Preference number: 2 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLRPDSF*TVNRRL
Trigger: CAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCT...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGGCGGGTCAGTGTCCTTaGCAGGTCTTACAACACATC +
Preference number: 2 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLAGQCP*QVLQHI
Trigger: GATGTGTTGTAAGACCTGCCAAGGACACTGACCCGC...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTCAAAGAAGGGACATCTaGAACCCATCGGACTGTCAG +
Preference number: 2 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRQRRDI*NPSDCQ
Trigger: CTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTG...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR CAA 90 bp GTCCCCTCAGCAGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCTCTACACACTTCCCCATATTTGCAT +
Preference number: 2 (lower is better)
Translates to: VPSAAGILLVTQRLL*LRHQSSLHTSPYLH
Trigger: ATGCAAATATGGGGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGCTGAGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLLGGSL*WTHFHD
Trigger: ATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAG...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CACCAAGGCAATATTTCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTATCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTT +
Preference number: 2 (lower is better)
Translates to: HQGNISHLLKVLDCHSVLSGSPS*YRVQHF
Trigger: AAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGA...TAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGAAATATTGCCTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCATCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTT +
Preference number: 2 (lower is better)
Translates to: MEISASLAQWQVGHRLLASGSPS*YRVQHF
Trigger: AAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGA...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCACCACAGACTCGGCACCTATCTTCCCTAGCATCAGATCCCAAAATATTATCAGAGCAGGGCAGAAGCTaGTCTGTGGCTGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: PPQTRHLSSLASDPKILSEQGRS*SVAGGD
Trigger: ATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTC...TGATAATATTTTGGGATCTGATGCTAGGGAAGATAGGTGCCGAGTCTGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CTTCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATGGTCCAAAGCTACCCACTaGGGTGGACATGACTGGTTG +
Preference number: 2 (lower is better)
Translates to: LQYWREGCYHICCHTAAWSKATH*GGHDWL
Trigger: CAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGA...CCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGCATGGCTCACAGCAGTaGTCAGAACAGGGGTTATTC +
Preference number: 2 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLHGSQQ*SEQGLF
Trigger: GAATAACCCCTGTTCTGAGCACTGCTGTGAGCCATG...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CTTCAATGGCATCACAGGTGCTTCCATCCCCACCACAGACTCGGCACCTATCTTCATGGCTCACAGCAGTaGTCAGAACAGGGGTTATTC +
Preference number: 2 (lower is better)
Translates to: LQWHHRCFHPHHRLGTYLHGSQQ*SEQGLF
Trigger: GAATAACCCCTGTTCTGAGCACTGCTGTGAGCCATG...AAGATAGGTGCCGAGTCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGGAATGTTTTGCATTGGCGGGATGTTaGTCCATACTGGAAACGACA +
Preference number: 2 (lower is better)
Translates to: DASRRLALLWTLCSWECFALAGC*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC...AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCAGTCCATGAAGCAGCACTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: SNLLQTTSCLWTPVHEAALRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...TGCTGCTTCATGGACTGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAAAGAGCACGGCCCTTGTaGGCATCCCACCATCACAAG +
Preference number: 2 (lower is better)
Translates to: VSLAGLTTHLSEVCSTAERARPL*ASHHHK
Trigger: CTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCT...TTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAAGCAGAGGCAGGAACTaGACAGTACCTGTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: SQMEGLTICFVSLIASSGSRGRN*TVPVGV
Trigger: GACCCCCACAGGTACTGTGCAGTTCCTGCCTCTGCT...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGCTGGGGCTGACCAGTaGTTACATTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLAGADQ*LHFPQG
Trigger: ACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGC...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGGCTGGGGCTGACCAGTaGTTACATTTTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: EISASLAQWQVGHRLLALAGADQ*LHFPQG
Trigger: ACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGC...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: TAADASRRLALLWTLCSWVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...CCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CAA 90 bp CATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: HTPDLGPQLDKESHA*EAHYQGKYHGLNCK
Trigger: TTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp TCTTGTCTTTGGACACCAGTCCATGAAGCAGCAAGGGTGTTGGCTTaGAAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: SCLWTPVHEAARVLA*KEANCPALPARGKE
Trigger: TTCTTTACCTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTCATGGACTGGTGTCCAAAGACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTTTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 2 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR TCA 90 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACTTTCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SLAGLTTHLSEVCSTAELSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...AAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAAGCGGTTGCTTTTGCTaGGGCACCAGAGCTCTCTAC +
Preference number: 2 (lower is better)
Translates to: PTFKIVLEKHQQRYSLCQSGCFC*GTRALY
Trigger: GTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCT...TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRWAMSH*RTLQWH
Trigger: ATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCA...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCAAGGTCCAACTTTCCTaGTGCAGAGCACGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSKVQLS*CRARPL
Trigger: CAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTT...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GCCACTTTGTTCACATCTTTGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCACCACTGAGGTGGACATaGCTGGTTGTTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: ATLFTSLHSSVLERGVLSPLRWT*LVVAGL
Trigger: GAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGG...TGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCAAAGATGTGAACAAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 2 (lower is better)
Translates to: WISQIWQSLLIPCPALWICHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 2 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLCHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp TTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACACTCATACTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: FDCWRREFEWDCGKHTLILRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...TATGAGTGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGTCCACTTCCTCTGGGTaGTTCTCTTTGATGGACGCA +
Preference number: 2 (lower is better)
Translates to: EISASLAQWQVGHRLLALSTSSG*FSLMDA
Trigger: TGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CATGACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGTCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: HDWLLQDSFSTGRCVKQSSIHFL*VVLFDG
Trigger: TCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGA...CGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACCTCCAGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAACCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 2 (lower is better)
Translates to: TSSTSSRALRPGLISPHEPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...TTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTGGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAG +
Preference number: 2 (lower is better)
Translates to: TFLMQSTALVRIPPSQVLVSCVV*ISQIWQ
Trigger: CTGCCAGATCTGAGAGATCCAAACAACACAGGAAAC...CAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCAAGCTGATCTGTGGCTaGTGGGGATGTAAACACGAA +
Preference number: 2 (lower is better)
Translates to: WISQIWQSLLIPCPALWIKLICG*WGCKHE
Trigger: TTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ATTTCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGAACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: ISHLLKVLDCHSVLETRRTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...TCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp CCCATATTTGCATTGGCGGGATGTTGCTCCATACTGGAAACGACATaGTTCATCAGCATCATACACCTGACCTGGGGCCACAGCTGGATA +
Preference number: 2 (lower is better)
Translates to: PIFALAGCCSILETT*FISIIHLTWGHSWI
Trigger: TATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp CATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAATCTAGAA +
Preference number: 2 (lower is better)
Translates to: HTPDLGPQLDKESHA*EAHYQGKYHGLNLE
Trigger: TTCTAGATTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
3UTR-3UTR TCA 90 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACTTCCTGTCAGCTGGGGCTaGCCAGTGGTTACATTTTCC +
Preference number: 2 (lower is better)
Translates to: SLAGLTTHLSEVCSTAELPVSWG*PVVTFS
Trigger: GGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGG...AAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGGAGCAGGGCAGAAGCTaGTCTGTGGCTGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKEQGRS*SVAGGD
Trigger: ATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTC...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCATTGATACAGATATCCAGTGAGTCTGCATTGCACTGTGTCCCATCTATCACATCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 2 (lower is better)
Translates to: PLIQISSESALHCVPSITSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...TGTGATAGATGGGACACAGTGCAATGCAGACTCACTGGATATCTGTATCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TTGCTGCACTCCAACCAGTCTCCAATGAACCATTCAGGTGGGCAAGGCTCAGTGGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: LLHSNQSPMNHSGGQGSVDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...CACTGAGCCTTGCCCACCTGAATGGTTCATTGGAGACTGGTTGGAGTGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TTGCTGCACTCCAACCAGTCTCCAATGAACCATTCAGGTGGGCAAGGCTCAGTGTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: LLHSNQSPMNHSGGQGSVWAMSH*RTLQWH
Trigger: ATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCA...CACTGAGCCTTGCCCACCTGAATGGTTCATTGGAGACTGGTTGGAGTGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGGCAGGTCTTACAACACACCGATGCTTGAATCCTaGACCACATTTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: TGLSGFLRVSVLGRSYNTPMLES*TTFRST
Trigger: TGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGG...TGTGTTGTAAGACCTGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGGTCAGATGGAGGGCTTaGCCATATGCTTTGTATCAC +
Preference number: 2 (lower is better)
Translates to: EISASLAQWQVGHRLLALVRWRA*PYALYH
Trigger: GTGATACAAAGCATATGGTCAAGCCCTCCATCTGAC...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATCATGGCTCACAGCAGTaGTCAGAACAGGGGTTATTC +
Preference number: 2 (lower is better)
Translates to: AQLQQLLRSFKPSPSLFNHGSQQ*SEQGLF
Trigger: GAATAACCCCTGTTCTGAGCACTGCTGTGAGCCATG...ATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTCTTAGGTCTGGCTTCTaGATGAAATTGAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLLRSGF*MKLKCF
Trigger: AAAACATTTCAATTTCATGCAGAAGCCAGACCTAAG...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGACACATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 2 (lower is better)
Translates to: SHLLKVLDCHSVLETRRHIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...GTGTCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLLLWTL*SWECFR
Trigger: TCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAG...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCGACTCTCTGGCTTTCTaGGGGTCAGTGTCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGDSLAF*GSVSLA
Trigger: TGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTC...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CTTCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATGGCACATCACCAACCACTaGCTAACAGCTATGTCTACC +
Preference number: 2 (lower is better)
Translates to: LQYWREGCYHICCHTAAWHITNH*LTAMST
Trigger: GGTAGACATAGCTGTTAGGCAGTGGTTGGTGATGTG...CCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGTAGCCTGTCCACTGTaGCAATGCACTTCCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSVACPL*QCTSWR
Trigger: TCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTAC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCAGAGGACAGAGATGGCTaGAGTAGCAGTGGCATTGTA +
Preference number: 2 (lower is better)
Translates to: MEISASLAQWQVGHRLLAEDRDG*SSSGIV
Trigger: TACAATGCCACTGCTACTGCAGCCATCTCTGTCCTC...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCATCCACTTCCTCTGGGTaGTTCTCTTTGATGGACGCA +
Preference number: 2 (lower is better)
Translates to: MEISASLAQWQVGHRLLASTSSG*FSLMDA
Trigger: TGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TCACGCTTTGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTGCAAAGCTCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: SRFGGSLSRQVPRPELQSSIHFL*VVLFDG
Trigger: TCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGA...GCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCAAATTTCCTAGGCCAGTCGGAACCCAAAGGGCATaGATCTGTGTTGCAAGAGCG +
Preference number: 2 (lower is better)
Translates to: RSLVVKSCPRNIKFPRPVGTQRA*ICVARA
Trigger: CGCTCTTGCAACACAGATCCATGCCCTTTGGGTTCC...GACTGGCCTAGGAAATTTGATGTTTCGGGGACAGCTTTTCACTACAAGAGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
3UTR-3UTR CCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCCATGAAAAACGCACATaGGACAACCAACACATCACC +
Preference number: 2 (lower is better)
Translates to: WISQIWQSLLIPCPALWIHEKRT*DNQHIT
Trigger: GGTGATGTGTTGGTTGTCCCATGTGCGTTTTTCATG...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CTTCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATGGCTTCCTTTAGTGGAATaGCTGGGATGGTACTTAGGC +
Preference number: 2 (lower is better)
Translates to: LQYWREGCYHICCHTAAWLPLVE*LGWYLG
Trigger: GCCTAAGTACCATCCCAGCCATTCCACTAAAGGAAG...CCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR CAA 90 bp ACAATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTaGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: TMASWPQTLSTEFID*HSCSNCCAASNQVP
Trigger: AGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATAAGGTCCAACTTTCCTaGTGCAGAGCACGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYKVQLS*CRARPL
Trigger: CAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTT...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CATCAATACTCTGGGGCCATGTGCCAAAAGGAACACAATCTCCCTGATAACACCCATGGCTCACAGCAGTaGTCAGAACAGGGGTTATTC +
Preference number: 2 (lower is better)
Translates to: HQYSGAMCQKEHNLPDNTHGSQQ*SEQGLF
Trigger: GAATAACCCCTGTTCTGAGCACTGCTGTGAGCCATG...GGTGTTATCAGGGAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTATTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACTGTGTCCCATCTATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCTTCAGTCTCTGCCATaGCTTAGGTCTGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: TVSHLSQQELALCRNYSLLQSLP*LRSGFC
Trigger: GCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAG...AAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATAGATGGGACACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTGCGAGCAGGAGGCTTaGTCTCCTCTGGACATTGTG +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQCEQEA*SPLDIV
Trigger: CACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCA...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCAGCCAGGCAATTGGCATGGATCTGTGTTaGAAGAGCGGTAGCGTTTCC +
Preference number: 2 (lower is better)
Translates to: YHSRSSLCVEIIAFSQAIGMDLC*KSGSVS
Trigger: GGAAACGCTACCGCTCTTGCAACACAGATCCATGCC...AATTGCCTGGCTGAAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
3UTR-3UTR GCA 90 bp GAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACATACTGTCAAAGTCTaGACACTGTTTTTCTCGAAA +
Preference number: 2 (lower is better)
Translates to: EGPTFLMQSTALVRIPPSHTVKV*TLFFSK
Trigger: TTTCGAGAAAAACAGTGTGCAGACTTTGACAGTATG...TGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224303.2
3UTR-3UTR CCA 90 bp CGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCAAATTTCCTAGGCCAGTCACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: RSLVVKSCPRNIKFPRPVTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...GACTGGCCTAGGAAATTTGATGTTTCGGGGACAGCTTTTCACTACAAGAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAATGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACA +
Preference number: 2 (lower is better)
Translates to: PTFKIVLEKHQQRYSLCQCPLSS*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACA...TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGCCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: KQPTFKIVLEKHQQRYSLPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...CAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CCACCACAGACTCGGCACCTATCTTCCCTAGCATCAGATCCCAAAATATTATCACCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PPQTRHLSSLASDPKILSPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...TGATAATATTTTGGGATCTGATGCTAGGGAAGATAGGTGCCGAGTCTGTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCACATGAAGCCAACTTCATTATCTCCACTGCCAGTACGAACGATGGGAACATTCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: PHEANFIISTASTNDGNILEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...AATGTTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAGTTGGCTTCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTCAATATTCCCAGTCTaGCACAGTGTCCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: KQPTFKIVLEKHQQRYSLSIFPV*HSVPSA
Trigger: TGCTGAGGGGACACTGTGTCAGACTGGGAATATTGA...CAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCTCAATATTCCCAGTCTaGCACAGTGTCCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGSIFPV*HSVPSA
Trigger: TGCTGAGGGGACACTGTGTCAGACTGGGAATATTGA...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGATATTTCCCACCTCCTaGAGGTGCTGGACTGTCACA +
Preference number: 2 (lower is better)
Translates to: KQPTFKIVLEKHQQRYSLIFPTS*RCWTVT
Trigger: TGTGACAGTCCAGCACCTTCAGGAGGTGGGAAATAT...CAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTTGATTGCTGGAGAAGGGCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTG +
Preference number: 2 (lower is better)
Translates to: ELCSIPVYCPLTLIAGEGQGCWL*RKPTVL
Trigger: CAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTG...CCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTGTGTTGCAGGCTCTTTaGTTTTCAGGTGGCTTACTG +
Preference number: 2 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLVLQAL*FSGGLL
Trigger: CAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACAC...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGGCAGGTCTTACAACACAAACAAGTTGCATCTGTaGTGTATGATTCTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: TGLSGFLRVSVLGRSYNTNKLHL*CMILAG
Trigger: ACCAGCAAGAATCATACATCACAGATGCAACTTGTT...TGTGTTGTAAGACCTGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GCCACTTTGTTCACATCTTTGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCAGTCAGATGGAGGGCTTaGCCATATGCTTTGTATCAC +
Preference number: 2 (lower is better)
Translates to: ATLFTSLHSSVLERGVLSVRWRA*PYALYH
Trigger: GTGATACAAAGCATATGGTCAAGCCCTCCATCTGAC...TGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCAAAGATGTGAACAAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CTTCTACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGAGCTGCAGCAATTGCTaGGCAGCTTCAAACCAAGTC +
Preference number: 2 (lower is better)
Translates to: LLPYQRRDIWNPSDCQQMSCSNC*AASNQV
Trigger: GACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCT...CATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGACACTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: SHLLKVLDCHSVLETRRHSSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...GTGTCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp TGTCTACCTCACTGGGGGATTATAATGGGGTCACTAACACCATTATCCCAGAGAGCATTGGCGGGATGTTaGTCCATACTGGAAACGACA +
Preference number: 2 (lower is better)
Translates to: CLPHWGIIMGSLTPLSQRALAGC*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC...TCTCTGGGATAATGGTGTTAGTGACCCCATTATAATCCCCCAGTGAGGTAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGGCATTGGCGGGATGTTaGTCCATACTGGAAACGACA +
Preference number: 2 (lower is better)
Translates to: AGNVLERSLLLHRTIRCLALAGC*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC...CAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GCCACTTTGTTCACATCTTTGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCATACTCTGGGGCCATGTaGCAAAAGGAACACAATCTC +
Preference number: 2 (lower is better)
Translates to: ATLFTSLHSSVLERGVLSYSGAM*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTA...TGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCAAAGATGTGAACAAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGACCCCACATCTGTGTTaGAAGAGCGGTAGCGTTTCC +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQTPHLC*KSGSVS
Trigger: GGAAACGCTACCGCTCTTGCAACACAGATGTGGGGT...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TTAGTTTGTGTTTTCGATGATGCTGTGTGTACGGGGCACATACGTGAAGGACTACAATGGCATCACAGGTaGTTCCATCCCCACCACAGA +
Preference number: 2 (lower is better)
Translates to: LVCVFDDAVCTGHIREGLQWHHR*FHPHHR
Trigger: TCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTG...TAGTCCTTCACGTATGTGCCCCGTACACACAGCATCATCGAAAACACAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp ACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCCACCATCACAAGTCTTaGTGCACTCCAACCAGTCTC +
Preference number: 2 (lower is better)
Translates to: TIRCLNPEPHLGVHSDQSHHHKS*CTPTSL
Trigger: GAGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTG...GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCTCCTAGCCATGGGTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGA +
Preference number: 2 (lower is better)
Translates to: SYFGRPLYQWQTLLLAMGLLWTL*SWECFR
Trigger: TCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAG...ACCCATGGCTAGGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACCATACTGTCAAAGTCTaGACACTGTTTTTCTCGAAA +
Preference number: 2 (lower is better)
Translates to: STSSRALRPGLISPHEANHTVKV*TLFFSK
Trigger: TTTCGAGAAAAACAGTGTGCAGACTTTGACAGTATG...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
3UTR-3UTR GCA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGGTGGGGGTCAGCCCTTaGGATGTTAGCTTCCAAGTG +
Preference number: 2 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWVGVSP*DVSFQV
Trigger: CACTTGGAAGCTAACATCGCAAGGGCTGACCCCCAC...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CCCCATATTTGCATTGGCGGGATGTTGCTCCATACTGGAAACGACATTGTTCATTCCACTTCCTCTGGGTaGTTCTCTTTGATGGACGCA +
Preference number: 2 (lower is better)
Translates to: PHICIGGMLLHTGNDIVHSTSSG*FSLMDA
Trigger: TGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA...ATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCTCCACTTCCTCTGGGTaGTTCTCTTTGATGGACGCA +
Preference number: 2 (lower is better)
Translates to: TIRCLNPEPHLGVHSDQSSTSSG*FSLMDA
Trigger: TGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGA...GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCCCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 2 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCTCCTAGCCATGGGTGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAG +
Preference number: 2 (lower is better)
Translates to: SYFGRPLYQWQTLLLAMGVSCVV*ISQIWQ
Trigger: CTGCCAGATCTGAGAGATCCAAACAACACAGGAAAC...ACCCATGGCTAGGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGCACAATGGCAAGTTaGCCACAGACTCTTAGCACT +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSCTMAS*PQTLST
Trigger: AGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCA...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGCTGATCTGTGGCTGGTaGGGATGTAAACACGAAGGA +
Preference number: 2 (lower is better)
Translates to: AGNVLERSLLLHRTIRCLLICGW*GCKHEG
Trigger: TCCTTCGTGTTTACATCCCCACCAGCCACAGATCAG...CAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCCCCATAGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: DTAVAFAEAPELSTHFPIVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...TATGGGGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 2 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TGTCTACCTCACTGGGGGATTATAATGGGGTCACTAACACCATTATCCCAGAGAATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 2 (lower is better)
Translates to: CLPHWGIIMGSLTPLSQRIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...TCTCTGGGATAATGGTGTTAGTGACCCCATTATAATCCCCCAGTGAGGTAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTATCTCCACTGCCAGTACGAACGATGGGAACATTGAACTTGTACCTAATTCCCCCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LSPLPVRTMGTLNLYLIPPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCGTACTGGCAGTGGAGATAA
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATCCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTG +
Preference number: 2 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWRPDSF*TVNRRL
Trigger: CAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCT...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTACATTTTCCACAGGGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTGGACACTGCTGCATGGATaGAGGCCGGACAGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: LHFPQGNAFVRTSIHFLWTLLHG*RPDSFW
Trigger: CCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGT...CCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACCCTGTGGAAAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp ACCAGAGCTCTCTACACACTTCCCCATATTTGCATTGGCGGGATGTaGCTCCATACTGGAAACGACATTGTTCATCAGCATCATACACCT +
Preference number: 2 (lower is better)
Translates to: TRALYTLPHICIGGM*LHTGNDIVHQHHTP
Trigger: AGGTGTATGATGCTGATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGGGAAGTGTGTAGAGAGCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYLGGSL*WTHFHD
Trigger: ATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAG...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TTATCTCCACTGCCAGTACGAACGATGGGAACATTGAACTTGTACCTAATTCCCCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 2 (lower is better)
Translates to: LSPLPVRTMGTLNLYLIPLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCGTACTGGCAGTGGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGATACAACACATCTGTCTaGAGTATGCTCGACTGCAGA +
Preference number: 2 (lower is better)
Translates to: SQMEGLTICFVSLIASSGYNTSV*SMLDCR
Trigger: TCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTA...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCGAAAGAAGCAGGGAATaGAGATATGGCTGGTCACAC +
Preference number: 2 (lower is better)
Translates to: TIRCLNPEPHLGVHSDQSERSRE*RYGWSH
Trigger: GTGTGACCAGCCATATCTTCATTCCCTGCTTCTTTC...GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGAAGTTAACTGTCCTTTaGAAAGGACCAAGGGAATTC +
Preference number: 2 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLKLTVL*KGPREF
Trigger: GAATTCCCTTGGTCCTTTTCAAAGGACAGTTAACTT...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGAATCTCAGCCTCCCTTaGACAATGGCAAGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQNLSLP*TMASWP
Trigger: TGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATT...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCAAATTTCCTAGGCCAGTCAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 2 (lower is better)
Translates to: RSLVVKSCPRNIKFPRPVSCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...GACTGGCCTAGGAAATTTGATGTTTCGGGGACAGCTTTTCACTACAAGAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp ACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCACACTTCCCCATATTTaGATTGGCGGGATGTTGCTC +
Preference number: 2 (lower is better)
Translates to: TIRCLNPEPHLGVHSDQSTLPHI*IGGMLL
Trigger: GAGCAACATCCCGCCAATGCAAATATGGGGAAGTGT...GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCAGCCAGGCAATTTACTCTGGGGCCATGTaGCAAAAGGAACACAATCTC +
Preference number: 2 (lower is better)
Translates to: YHSRSSLCVEIIAFSQAIYSGAM*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTA...AATTGCCTGGCTGAAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCCAGAGATACTCATTGTaGCAAGATGTATTTACCAAC +
Preference number: 2 (lower is better)
Translates to: WISQIWQSLLIPCPALWIQRYSL*QDVFTN
Trigger: GTTGGTAAATACATCTTGGCACAATGAGTATCTCTG...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCTCCTAGCCATGGGTCACAGAACAATCCGATaGTTGAATCCTGAACCACAT +
Preference number: 2 (lower is better)
Translates to: SYFGRPLYQWQTLLLAMGHRTIR*LNPEPH
Trigger: ATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTG...ACCCATGGCTAGGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACACTCATAGGCATGGATCTGTGTTaGAAGAGCGGTAGCGTTTCC +
Preference number: 2 (lower is better)
Translates to: FDCWRREFEWDCGKHTLIGMDLC*KSGSVS
Trigger: GGAAACGCTACCGCTCTTGCAACACAGATCCATGCC...TATGAGTGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
3UTR-3UTR GCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTGAGGGCTTGACCATATaGTTTGTATCACTGATAGCC +
Preference number: 2 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLEGLTI*FVSLIA
Trigger: GGCTATCAGTGATACAAAGCATATGGTCAAGCCCTC...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTATCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVSIHFL*VVLFDG
Trigger: TCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGA...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAG +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSVSCVV*ISQIWQ
Trigger: CTGCCAGATCTGAGAGATCCAAACAACACAGGAAAC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GCCACTTTGTTCACATCTTTGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCAGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAG +
Preference number: 2 (lower is better)
Translates to: ATLFTSLHSSVLERGVLSVSCVV*ISQIWQ
Trigger: CTGCCAGATCTGAGAGATCCAAACAACACAGGAAAC...TGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCAAAGATGTGAACAAAGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGCTTATCTTTCCGCATaGCATCATCTCCATAAGCTC +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSAYLSA*HHLHKL
Trigger: GAGCTTATGGAGATGATGCCATGCGGAAAGATAAGC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: MEISASLAQWQVGHRLLARTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGAACTTCAGCACCAGTaGGCAATAAGCCACTTTGTT +
Preference number: 2 (lower is better)
Translates to: CPWQVLQHICLKYARLQNELQHQ*AISHFV
Trigger: AACAAAGTGGCTTATTGCCCACTGGTGCTGAAGTTC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGCTTAACTTTGATTGCTaGAGAAGGGAGTTTGAATGG +
Preference number: 2 (lower is better)
Translates to: EISASLAQWQVGHRLLALLNFDC*RREFEW
Trigger: CCATTCAAACTCCCTTCTCCAGCAATCAAAGTTAAG...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGCGCTTTGTTTCCCCATaGAAGGCCGTGCTCCCCTCA +
Preference number: 2 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLRFVSP*KAVLPS
Trigger: TGAGGGGAGCACGGCCTTCCATGGGGAAACAAAGCG...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR TCA 90 bp ATACTGTCAAAGTCTGCACACTGTTTTTCTCGAAAATCTCGGGAACCCAAAGGGAGTTTTGCTGCCTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 2 (lower is better)
Translates to: ILSKSAHCFSRKSREPKGSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACT...CCCTTTGGGTTCCCGAGATTTTCGAGAAAAACAGTGTGCAGACTTTGACAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000224303.2
3UTR-3UTR TCA 90 bp TTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACACTCATAATATTTCCCACCTCCTaGAGGTGCTGGACTGTCACA +
Preference number: 2 (lower is better)
Translates to: FDCWRREFEWDCGKHTLIIFPTS*RCWTVT
Trigger: TGTGACAGTCCAGCACCTTCAGGAGGTGGGAAATAT...TATGAGTGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCACATGAAGCCAACTTCATTATCTCCACTGCCAGTACGAACGATGGGAACATTTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCAT +
Preference number: 2 (lower is better)
Translates to: PHEANFIISTASTNDGNIWAMSH*RTLQWH
Trigger: ATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCA...AATGTTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAGTTGGCTTCATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACTTCCGATGCTTGAATCCTaGACCACATTTAGGAGTACA +
Preference number: 2 (lower is better)
Translates to: SLAGLTTHLSEVCSTAELPMLES*TTFRST
Trigger: TGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGG...AAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CATCAATACTCTGGGGCCATGTGCCAAAAGGAACACAATCTCCCTGATAACACCATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 2 (lower is better)
Translates to: HQYSGAMCQKEHNLPDNTIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...GGTGTTATCAGGGAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTATTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp ACTGTGTCCCATCTATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 2 (lower is better)
Translates to: TVSHLSQQELALCRNYSLSCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...AAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATAGATGGGACACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCCCCCTTAACTTTGATTaGTGGAGAAGGGAGTTTGAA +
Preference number: 2 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSPLNFD*WRREFE
Trigger: TTCAAACTCCCTTCTCCAGCAATCAAAGTTAAGGGG...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQSIHFL*VVLFDG
Trigger: TCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGA...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACTGTGTCCCATCTATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 2 (lower is better)
Translates to: TVSHLSQQELALCRNYSLPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...AAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATAGATGGGACACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGGGTTTCCAGTTATAATGCTTTCCCCGGAAAGGCATACTGTCAAAGTCTGCACGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAG +
Preference number: 2 (lower is better)
Translates to: RVSSYNAFPGKAYCQSLHVSCVV*ISQIWQ
Trigger: CTGCCAGATCTGAGAGATCCAAACAACACAGGAAAC...GTGCAGACTTTGACAGTATGCCTTTCCGGGGAAAGCATTATAACTGGAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224303.2
3UTR-3UTR CCA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCCTGATCTGTGGCTGGTaGGGATGTAAACACGAAGGA +
Preference number: 2 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCLICGW*GCKHEG
Trigger: TCCTTCGTGTTTACATCCCCACCAGCCACAGATCAG...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CCACATGAAGCCAACTTCATTATCTCCACTGCCAGTACGAACGATGGGAACATTGCTTATCTTTCCGCATaGCATCATCTCCATAAGCTC +
Preference number: 2 (lower is better)
Translates to: PHEANFIISTASTNDGNIAYLSA*HHLHKL
Trigger: GAGCTTATGGAGATGATGCCATGCGGAAAGATAAGC...AATGTTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAGTTGGCTTCATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TCTGCTGCAGGCAGACCAGGAGAAGGGATTGGTATTTGCAGTAATATGAGCTGCTTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 2 (lower is better)
Translates to: SAAGRPGEGIGICSNMSCFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...GCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGGTCTGCCTGCAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp GTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAAGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 2 (lower is better)
Translates to: VSLAGLTTHLSEVCSTAEVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...TTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp GTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 2 (lower is better)
Translates to: VSLAGLTTHLSEVCSTAERTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...TTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp CCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAAAGAAAGTCACGCTTTaGAGGCTCATTATCAAGGCA +
Preference number: 2 (lower is better)
Translates to: PTFKIVLEKHQQRYSLCQKKVTL*RLIIKA
Trigger: TGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTT...TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCCCATATTTGCATTaGCGGGATGTTGCTCCATAC +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQSPYLH*RDVAPY
Trigger: GTATGGAGCAACATCCCGCCAATGCAAATATGGGGA...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp AGAGATGGCTGCAGTAGCAGTGGCATTGTAATGTGTTATGGAAGATGCTCTTCACAGGGAATGAAGATATaGCTGGTCACACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: RDGCSSSGIVMCYGRCSSQGMKI*LVTLEC
Trigger: ACACTCCAGTGTGACCAGCCATATCTTCATTCCCTG...TGAAGAGCATCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CAA 90 bp GGCCACTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATaGTGCCAAGATGTATTTACCAACAAATCTCCAGCACAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: GHFKIVLEKHQQRYS*CQDVFTNKSPAQVA
Trigger: TGCTACTTGTGCTGGAGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224742.2
3UTR CAA 90 bp TCTGGACATTGTGCAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGA +
Preference number: 2 (lower is better)
Translates to: SGHCAAGNVLERSLL*HRTIRCLNPEPHLG
Trigger: TCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCGCTTGCATTCTCCATTaGTACAGATATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: TIRCLNPEPHLGVHSDQSACILH*YRYPVS
Trigger: ACTCACTGGATATCTGTATCAATGGAGAATGCAAGC...GGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGTCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKSIHFL*VVLFDG
Trigger: TCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGA...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp CTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCCCGTGTCCAGCACTTTaGATCAATAAATCCCACTTC +
Preference number: 2 (lower is better)
Translates to: LERTQTLHSKQVSCVVWIPCPAL*INKSHF
Trigger: GAAGTGGGATTTATTGATCCAAAGTGCTGGACACGG...GATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAGGGAATGAAGATATaGCTGGTCACACTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: DSLGEAPAEILIVPRCIYQGMKI*LVTLEC
Trigger: ACACTCCAGTGTGACCAGCCATATCTTCATTCCCTG...GTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR CAA 90 bp GGTGGCTTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTaGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCA +
Preference number: 2 (lower is better)
Translates to: GGLLSGSQKLFWTME*SSNLLQTTSCLWTP
Trigger: TGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp AGACAACAGGAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTaGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACA +
Preference number: 2 (lower is better)
Translates to: RQQELCSIPVYCPLT*IAGEGSLNGIVGNT
Trigger: TGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTCCTGTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CCTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATCATGGTTCATACCAATTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 2 (lower is better)
Translates to: PHDLSSHKNFQFHHGSYQLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...TTGGTATGAACCATGATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR TCA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224303.2
3UTR-3UTR TCA 90 bp GTCCTAGAGCTTCCAAGGATTCTGGTTCATCTGTCGGTCTCTTGTAGTGAAAAGTTCATACCAAAATTGTaGCCAATCTCATGTGCGATG +
Preference number: 2 (lower is better)
Translates to: VLELPRILVHLSVSCSEKFIPKL*PISCAM
Trigger: CATCGCACATGAGATTGGTCACAATTTTGGTATGAA...CTTTTCACTACAAGAGACCGACAGATGAACCAGAATCCTTGGAAGCTCTAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp GATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCTTCATTATCTCCACTaGCAGTACGAACGATGGGAA +
Preference number: 2 (lower is better)
Translates to: DSLGEAPAEILIVPRCIYLHYLH*QYERWE
Trigger: TTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAG...GTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGGAGGGCTTGACCATATaGTTTGTATCACTGATAGCC +
Preference number: 2 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKEGLTI*FVSLIA
Trigger: GGCTATCAGTGATACAAAGCATATGGTCAAGCCCTC...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGGATGTTGCTCCATACTaGAAACGACATTGTTCATCA +
Preference number: 2 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQDVAPY*KRHCSS
Trigger: TGATGAACAATGTCGTTTCCAGTATGGAGCAACATC...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTTCCCCATATTTGCATTaGCGGGATGTTGCTCCATAC +
Preference number: 2 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSSPYLH*RDVAPY
Trigger: GTATGGAGCAACATCCCGCCAATGCAAATATGGGGA...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCATGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACA +
Preference number: 2 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPCPLSS*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACA...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GTGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACCCAAATTCTGTTCTTaGAGTAGAACCATTACAATG +
Preference number: 2 (lower is better)
Translates to: VSLAGLTTHLSEVCSTAEPKFCS*SRTITM
Trigger: CATTGTAATGGTTCTACTCCAAGAACAGAATTTGGG...TTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 2 (lower is better)
Translates to: AGNVLERSLLLHRTIRCLSLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...CAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp AATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTaGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: NVLERSLLLHRTIRC*NPEPHLGVHSDQSK
Trigger: TTTGGACTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp CTTAACTTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACAGCTTGCATTCTCCATTaGTACAGATATCCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: LNFDCWRREFEWDCGKHTACILH*YRYPVS
Trigger: ACTCACTGGATATCTGTATCAATGGAGAATGCAAGC...TGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAAGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GTTTTGCTGCCTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATCATGGTATATCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 2 (lower is better)
Translates to: VLLPHDLSSHKNFQFHHGISDLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGATAT...ACCATGATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224504.2
3UTR-3UTR TCA 90 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTTGATTGCTGGAGAAGGGAACAAGTTGCATCTGTaGTGTATGATTCTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: ELCSIPVYCPLTLIAGEGNKLHL*CMILAG
Trigger: ACCAGCAAGAATCATACATCACAGATGCAACTTGTT...CCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGGAAAGAAGCAGGGAATaGAGATATGGCTGGTCACAC +
Preference number: 2 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLERSRE*RYGWSH
Trigger: GTGTGACCAGCCATATCTTCATTCCCTGCTTCTTTC...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp CTTAACTTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACATGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LNFDCWRREFEWDCGKHTCSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...TGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAAGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224303.2
3UTR-3UTR GCA 90 bp TTACATTTTCCACAGGGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTGGTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LHFPQGNAFVRTSIHFLWCSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...CCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACCCTGTGGAAAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTAAAGGTCACTGCTCTTaGACAGAACAATCCGATGCT +
Preference number: 2 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVKGHCS*TEQSDA
Trigger: AGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTTGATTGCTGGAGAAGGGGATGTTGCTCCATACTaGAAACGACATTGTTCATCA +
Preference number: 2 (lower is better)
Translates to: ELCSIPVYCPLTLIAGEGDVAPY*KRHCSS
Trigger: TGATGAACAATGTCGTTTCCAGTATGGAGCAACATC...CCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTTGATTGCTGGAGAAGGGTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 2 (lower is better)
Translates to: ELCSIPVYCPLTLIAGEGSLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...CCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TCTGTGCCTGGTATGAAATTTCACTCCATCAAGTGTTACAATGACTTTCATTTTAGGCTTGCTCTCCTCTaGACATTGTGCAGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SVPGMKFHSIKCYNDFHFRLALL*TLCSWE
Trigger: TTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCT...AAAATGAAAGTCATTGTAACACTTGATGGAGTGAAATTTCATACCAGGCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR CAA 90 bp AAACATGTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTaGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTT +
Preference number: 2 (lower is better)
Translates to: KHVFMKSKQPTFKIV*EKHQQRYSLCQDVF
Trigger: AAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACACATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCAGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTCTTCATTATCTCCACTaGCAGTACGAACGATGGGAA +
Preference number: 2 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLLHYLH*QYERWE
Trigger: TTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAG...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACACCAGAGGTAAAGAATTaGATTGGTGGCCACTTCAAG +
Preference number: 2 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTPEVKN*IGGHFK
Trigger: CTTGAAGTGGCCACCAATGCAATTCTTTACCTCTGG...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224742.2
3UTR-3UTR CCA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGGCTTATCTTTCCGCATaGCATCATCTCCATAAGCTC +
Preference number: 2 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLAYLSA*HHLHKL
Trigger: GAGCTTATGGAGATGATGCCATGCGGAAAGATAAGC...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CAA 90 bp TTTTTGACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTaGGTATCTGAACCACTTCCATATAACCTCCTCTGGGCAATGAGT +
Preference number: 2 (lower is better)
Translates to: FLTWKLLLLQYEQSL*VSEPLPYNLLWAMS
Trigger: ACTCATTGCCCAGAGGAGGTTATATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGTCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 90 bp ACTTCATTATCTCCACTGCCAGTACGAACGATGGGAACATTGAACTaGTACCTAATTCCCAAATTCTGTTCTTGGAGTAGAACCATTACA +
Preference number: 2 (lower is better)
Translates to: TSLSPLPVRTMGTLN*YLIPKFCSWSRTIT
Trigger: TGTAATGGTTCTACTCCAAGAACAGAATTTGGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR GCA 90 bp GAAGGGATTGGTATTTGCAGTAATATGAGCTGCCATAAGTTTTGCTGCCTCATGTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 2 (lower is better)
Translates to: EGIGICSNMSCHKFCCLMSSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...CATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGATGTGTTATGGAAGATaGTCTTCATTTTGTGTAACC +
Preference number: 2 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQMCYGR*SSFCVT
Trigger: GGTTACACAAAATGAAGAGCATCTTCCATAACACAT...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTGATGTTGCTCCATACTaGAAACGACATTGTTCATCA +
Preference number: 2 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSDVAPY*KRHCSS
Trigger: TGATGAACAATGTCGTTTCCAGTATGGAGCAACATC...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CCA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTATGAACAGAGCCTCTTaGTATCTGAACCACTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLMNRAS*YLNHFH
Trigger: ATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCAT...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR TCA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACAATCTCCAAGTTTGGCTaGTCTTCAGTGAGAACAATT +
Preference number: 2 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTISKFG*SSVRTI
Trigger: AATTGTTCTCACTGAAGATCAGCCAAACTTGGAGAT...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR GCA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCACTTAGGTCTGGCTTCTaGATGAAATTGAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPLRSGF*MKLKCF
Trigger: AAAACATTTCAATTTCATGCAGAAGCCAGACCTAAG...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp TTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTaGTCCCACTGTTACCACGGAGGACAGAGATGGCTG +
Preference number: 3 (lower is better)
Translates to: LECLPGQPSLRC*SHCYHGGQRWL
Trigger: CAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 72 bp TTAGAGACGAGGAGACACCTCCTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACCAGGAACCCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: LETRRHLLRRSY*TRPTVTRNPSP
Trigger: GGGGCTGGGGTTCCTGGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAGGAGGTGTCTCCTCGTCTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGGGTGGACATGACTGGTaGTTGCAGGACTCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLGGHDW*LQDSFS
Trigger: GGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACC...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GCAGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTCCAGGCTCCCATGTGTaGCCTTCCTTTAGTGGAATG +
Preference number: 3 (lower is better)
Translates to: AAQPPLLIPLLPRRTEMAPGSHV*PSFSGM
Trigger: CATTCCACTAAAGGAAGGCAACACATGGGAGCCTGG...AGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGAAATCTCAGCCTCCCTaGCACAATGGCAAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: TAADASRRLALLWTLCSWKSQPP*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTT...CCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CACACTGCCAGCTGTGGGCTGCCTAGTGGGTGTCTTACCTCCAGCACAAGTAGCGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: HTASCGLPSGCLTSSTSSAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...GCTACTTGTGCTGGAGGTAAGACACCCACTAGGCAGCCCACAGCTGGCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR TCA 72 bp GGACACCAGTCCATGAAGCAGCAAGGGTGTTGGCTTTaGAGGAAGCCAACTGTCCTGCTCTCCCAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GHQSMKQQGCWL*RKPTVLLSQPE
Trigger: CTCTGGCTGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTCATGGACTGGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp GTCTCGGTGACTCAAATAAGGCATCCCACTGACGGCTaGAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTT +
Preference number: 3 (lower is better)
Translates to: VSVTQIRHPTDG*KGLVLQSLPCL
Trigger: AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCTTATTTGAGTCACCGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp GGAGTAGGTTTTGCTCCCACACTGCCAGCTGTGGGCTaGCTAGTGGGTGTCTTACCTCCAGCACAAGTAGCA +
Preference number: 3 (lower is better)
Translates to: GVGFAPTLPAVG*LVGVLPPAQVA
Trigger: TGCTACTTGTGCTGGAGGTAAGACACCCACTAGGCAGCCCACAGCTGGCAGTGTGGGAGCAAAACCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR GCA 72 bp AAGGCCGTGCTCCCCTCAGCAGTAGCCTGTCCACTGTaGCAATGCACTTCCTGGAGAGAGCATAGACTGATC +
Preference number: 3 (lower is better)
Translates to: KAVLPSAVACPL*QCTSWREHRLI
Trigger: GATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGCTGAGGGGAGCACGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CTCTTCAGAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCAAATCTCAGCCTCCCTaGCACAATGGCAAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LFRRSNFPDAEHGPCAHPKSQPP*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTT...GGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTCTGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp CTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTaGTGCATGGATGGAGGCCGGACAGTTTCTGGACAG +
Preference number: 3 (lower is better)
Translates to: LERGVLSHLLSH*CMDGGRTVSGQ
Trigger: CTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp AACAGCCGAGCAGGGCAGAAGCTGATCTGTGGCTGGTaGGGATGTAAACACGAAGGAGTCTCGGTGACTCAA +
Preference number: 3 (lower is better)
Translates to: NSRAGQKLICGW*GCKHEGVSVTQ
Trigger: TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTTCTGCCCTGCTCGGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGCGAACGATGGGAACATaGAACTTGTACCTAATTCCC +
Preference number: 3 (lower is better)
Translates to: TAADASRRLALLWTLCSWRTMGT*NLYLIP
Trigger: GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCG...CCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 3 (lower is better)
Translates to: TAADASRRLALLWTLCSWSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...CCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp CCAAAGCTACCCACTGAGGTGGACATGACTGGTTGTTaGAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGC +
Preference number: 3 (lower is better)
Translates to: PKLPTEVDMTGC*RTLSPQAGVLS
Trigger: GCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp GAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTaGATGGATGGAGGCCGGACAGTTTCTGGACAGTCA +
Preference number: 3 (lower is better)
Translates to: ERGVLSHLLSHC*MDGGRTVSGQS
Trigger: TGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp GTGCTCCCCTCAGCAGTAGCCTGTCCACTGTGCCAATaGACTTCCTGGAGAGAGCATAGACTGATCTCTTAC +
Preference number: 3 (lower is better)
Translates to: VLPSAVACPLCQ*TSWREHRLISY
Trigger: GTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGCTGAGGGGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 72 bp ACTGCAGCGGATGCGAGCAGGAGGCTTGCTCTCCTCTaGACATTGTGCAGCTGGGAATGTTTTAGAAAGGTC +
Preference number: 3 (lower is better)
Translates to: TAADASRRLALL*TLCSWECFRKV
Trigger: GACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp GTCACACTGCTGCATGGATGGAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTGTCCAGTATAGGAAAG +
Preference number: 3 (lower is better)
Translates to: VTLLHGWRPDSF*TVNRRLSSIGK
Trigger: CTTTCCTATACTGGACAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp GAGGGGTGCTATCACATTTGCTGTCACACTGCTGCATaGATGGAGGCCGGACAGTTTCTGGACAGTCAACAG +
Preference number: 3 (lower is better)
Translates to: EGCYHICCHTAA*MEAGQFLDSQQ
Trigger: CTGTTGACTGTCCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATGTGATAGCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TCCAGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCTTCCCCATATTTGCATaGGCGGGATGTTGCTCCATA +
Preference number: 3 (lower is better)
Translates to: SSTSSRALRPGLISPHEAFPIFA*AGCCSI
Trigger: TATGGAGCAACATCCCGCCAATGCAAATATGGGGAA...GGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACCTCCAGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAACACACTTCCCCATATTaGCATTGGCGGGATGTTGCT +
Preference number: 3 (lower is better)
Translates to: TSSTSSRALRPGLISPHEHTSPY*HWRDVA
Trigger: AGCAACATCCCGCCAATGCAAATATGGGGAAGTGTG...TTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CATGACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCACCATCACAAGTCTaGCTGCACTCCAACCAGTCT +
Preference number: 3 (lower is better)
Translates to: HDWLLQDSFSTGRCVKQSPPSQV*LHSNQS
Trigger: AGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTGG...CGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp ATCTTTCCGCATGGCATCATCTCCATAAGCTCACCATaGATGCAACAGCCGAGCAGGGCAGAAGCTGATCTG +
Preference number: 3 (lower is better)
Translates to: IFPHGIISISSP*MQQPSRAEADL
Trigger: CAGATCAGCTTCTGCCCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GAACCCTTCAATGGCATCACAGGTGCTTCCATCCCCACCACAGACTCGGCACCTACTGAGTTTATAGACTaGCACAGCTGCAGCAATTGC +
Preference number: 3 (lower is better)
Translates to: EPFNGITGASIPTTDSAPTEFID*HSCSNC
Trigger: GCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGT...AGGTGCCGAGTCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTGAAGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCAAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 3 (lower is better)
Translates to: EGPTFLMQSTALVRIPPSKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...TGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TGCACTCTTCAGTACTGGAGAGAGGGGTGCTATCACATTTGCTGTCACACTGCTACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: CTLQYWREGCYHICCHTATQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...AGCAGTGTGACAGCAAATGTGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTGCTGCATCAGGATCACAGAAATaGTTCTGGACAATGGAGTTG +
Preference number: 3 (lower is better)
Translates to: PDAEHGPCAHPTITSLAASGSQK*FWTMEL
Trigger: CAACTCCATTGTCCAGAACAATTTCTGTGATCCTGA...TGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGAAGCTGAGGAGGCCTTaGGTGACAGCCTTTCTAAGG +
Preference number: 3 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLKLRRP*VTAFLR
Trigger: CCTTAGAAAGGCTGTCACCAAAGGCCTCCTCAGCTT...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 3 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CAATGCACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGTAGCAGAACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: QCTSWREHRLISYPSSSRTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...TCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTTTTACAGACCACTTCTaGTCTTTGGACACCAGTCCA +
Preference number: 3 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRFTDHF*SLDTSP
Trigger: TGGACTGGTGTCCAAAGACAAGAAGTGGTCTGTAAA...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp GTGGTTCTCTTTGATGGACGCATTTCCACGATGAAATaGCAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: VVLFDGRISTMK*QDSLAFCGSVS
Trigger: GGACACTGACCCGCAGAAAGCCAGAGAGTCCTGTCATTTCATCGTGGAAATGCGTCCATCAAAGAGAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp CACTGTGCCAATGCACTTCCTGGAGAGAGCATAGACTaGTCTCTTACCCTAGCAGTAGCAGAGGCAGGAACT +
Preference number: 3 (lower is better)
Translates to: HCANALPGESID*SLTLAVAEAGT
Trigger: AGTTCCTGCCTCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 72 bp GAGGCTCATTATCAAGGCAAGTACCACGGCCTGAACTaGAAAGCCGTCTTCGGAAAACATCAGAAGCTGGCA +
Preference number: 3 (lower is better)
Translates to: EAHYQGKYHGLN*KAVFGKHQKLA
Trigger: TGCCAGCTTCTGATGTTTTCCGAAGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp GATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTT +
Preference number: 3 (lower is better)
Translates to: DASRRLALLWTL*SWECFRKVTAL
Trigger: AAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp CAAGGGAATTCAAGTCTGGGCCAGGCTCCCATGTGTTaGCTTCCTTTAGTGGAATGGCTGGGATGGTACTTA +
Preference number: 3 (lower is better)
Translates to: QGNSSLGQAPMC*LPLVEWLGWYL
Trigger: TAAGTACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGACTTGAATTCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 72 bp AGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTaGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAG +
Preference number: 3 (lower is better)
Translates to: SRRLALLWTLCS*ECFRKVTALAQ
Trigger: CTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACTGGTTGTTGCAGGACTCTTTCTCCACAGGCCGGTGTGTTAAGCAGTCGCCGTAGCAAGTTTCCTGTGTaGTTTGGATCTCTCAGATCT +
Preference number: 3 (lower is better)
Translates to: TGCCRTLSPQAGVLSSRRSKFPV*FGSLRS
Trigger: AGATCTGAGAGATCCAAACAACACAGGAAACTTGCT...ACGGCGACTGCTTAACACACCGGCCTGTGGAGAAAGAGTCCTGCAACAACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGGCAGGTCTTACAACACAACTGAGTTTATAGACTaGCACAGCTGCAGCAATTGC +
Preference number: 3 (lower is better)
Translates to: TGLSGFLRVSVLGRSYNTTEFID*HSCSNC
Trigger: GCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGT...TGTGTTGTAAGACCTGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGTTGGTGACACAGCGGTaGCTTTTGCTGAGGCACCAG +
Preference number: 3 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQLVTQR*LLLRHQ
Trigger: CTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAA...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTCGAACGATGGGAACATaGAACTTGTACCTAATTCCC +
Preference number: 3 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLRTMGT*NLYLIP
Trigger: GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCG...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CAATGCACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGTAGCAGAGCAAGGGTGTTGGCTTaGAAGGAAGCCAACTGTCCT +
Preference number: 3 (lower is better)
Translates to: QCTSWREHRLISYPSSSRARVLA*KEANCP
Trigger: AGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGC...TCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACACCTTGCATTCTCCATaGATACAGATATCCAGTGAG +
Preference number: 3 (lower is better)
Translates to: STSSRALRPGLISPHEANTLHSP*IQISSE
Trigger: CTCACTGGATATCTGTATCAATGGAGAATGCAAGGT...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223562.2
3UTR TCA 72 bp CTTTGGAGGCTCATTATCAAGGCAAGTACCACGGCCTaGACTGCAAAGCCGTCTTCGGAAAACATCAGAAGC +
Preference number: 3 (lower is better)
Translates to: LWRLIIKASTTA*TAKPSSENIRS
Trigger: GCTTCTGATGTTTTCCGAAGACGGCTTTGCAGTTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp TTAGGAGTACATTCGGACCAGTCCAAAGCTACCCACTaGGGTGGACATGACTGGTTGTTGCAGGACTCTTTC +
Preference number: 3 (lower is better)
Translates to: LGVHSDQSKATH*GGHDWLLQDSF
Trigger: GAAAGAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGACTGGTCCGAATGTACTCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp ACGGGGCACATACGTGAAGGACTAAGGAGGTGTGCTTaGCACAAAGCACATTCACCAACAACCTACTACACG +
Preference number: 3 (lower is better)
Translates to: TGHIREGLRRCA*HKAHSPTTYYT
Trigger: CGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGTCCTTCACGTATGTGCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 72 bp GCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTaGAGTAGCAGTGGCATTGTAATGTGTTATGGAAGA +
Preference number: 3 (lower is better)
Translates to: ADPTVTTEDRDG*SSSGIVMCYGR
Trigger: TCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CCA 72 bp CAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTaGATCTCTCAGATCTGGCAGTCCCTCCTGATACCG +
Preference number: 3 (lower is better)
Translates to: QTLHSKQVSCVV*ISQIWQSLLIP
Trigger: CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp AATATTCCCAGTCTGACACAGTGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACAGCGGTTGCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: NIPSLTQCPLSS*NTVGDTAVAFA
Trigger: AGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACACTGTGTCAGACTGGGAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACAGGACTCTCTGGCTTTCTGCGGGTCAGTGTCCTTGGCAGGTCTTACAACACAAGCAAGTTTCCTGTGTaGTTTGGATCTCTCAGATCT +
Preference number: 3 (lower is better)
Translates to: TGLSGFLRVSVLGRSYNTSKFPV*FGSLRS
Trigger: AGATCTGAGAGATCCAAACAACACAGGAAACTTGCT...TGTGTTGTAAGACCTGCCAAGGACACTGACCCGCAGAAAGCCAGAGAGTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCCACACTTCCCCATATTaGCATTGGCGGGATGTTGCT +
Preference number: 3 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSHTSPY*HWRDVA
Trigger: AGCAACATCCCGCCAATGCAAATATGGGGAAGTGTG...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCGAAGCAGCAAGGGTGTaGGCTTTGAAGGAAGCCAAC +
Preference number: 3 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGEAARV*ALKEAN
Trigger: GTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTC...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 3 (lower is better)
Translates to: SQMEGLTICFVSLIASSGERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACCACTTCCATATAACCTaGCATTCTCCATTGATACAG +
Preference number: 3 (lower is better)
Translates to: STSSRALRPGLISPHEANHFHIT*HSPLIQ
Trigger: CTGTATCAATGGAGAATGCAAGGTTATATGGAAGTG...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223562.2
3UTR TCA 72 bp AAGGACATCCATCCACTTCCTCTGGGTGGTTCTCTTTaGTGGACGCATTTCCACGATGAAATGACAGGACTC +
Preference number: 3 (lower is better)
Translates to: KDIHPLPLGGSL*WTHFHDEMTGL
Trigger: GAGTCCTGTCATTTCATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGATGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp GTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTaGTACCGTGTCCAGCACTTTGGATCAATAAATCCC +
Preference number: 3 (lower is better)
Translates to: VLFGSLRSGSPS*YRVQHFGSINP
Trigger: GGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp TCTGCTGCAGGCAGACCAGGAGAAGGGATTGGTATTTaGAGTAATATGAGCTGCCATAAGTTTTGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: SAAGRPGEGIGI*SNMSCHKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGGTCTGCCTGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR GCA 72 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAACTTCAGCACCAGTGG +
Preference number: 3 (lower is better)
Translates to: SLAGLTTHLSEV*STAELELQHQW
Trigger: CCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp AAACGCACATGGGACAACCAACACATCACCAACCACTaGCTAACAGCTATGTCTACCTCACTGGGGGATTAT +
Preference number: 3 (lower is better)
Translates to: KRTWDNQHITNH*LTAMSTSLGDY
Trigger: ATAATCCCCCAGTGAGGTAGACATAGCTGTTAGGCAGTGGTTGGTGATGTGTTGGTTGTCCCATGTGCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR CCA 72 bp TTCATCAGCATCATACACCTGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTTTGGAGGCTCATTATC +
Preference number: 3 (lower is better)
Translates to: FISIIHLTWGHS*IKKVTLWRLII
Trigger: GATAATGAGCCTCCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp GAAACGACATTGTTCATCAGCATCATACACCTGACCTaGGGCCACAGCTGGATAAAGAAAGTCACGCTTTGG +
Preference number: 3 (lower is better)
Translates to: ETTLFISIIHLT*GHSWIKKVTLW
Trigger: CCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAACAATGTCGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTATACTGGAAACGACATaGTTCATCAGCATCATACAC +
Preference number: 3 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLILETT*FISIIH
Trigger: GTGTATGATGCTGATGAACAATGTCGTTTCCAGTAT...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCAAATTTCCTAGGCCAGTCCTGGGCAATGAGTCATaGAAGAACCCTTCAATGGCA +
Preference number: 3 (lower is better)
Translates to: RSLVVKSCPRNIKFPRPVLGNES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGACTCATTGCCCAG...GACTGGCCTAGGAAATTTGATGTTTCGGGGACAGCTTTTCACTACAAGAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGTTCTGGACAATGGAGTaGTCATCCAATCTTTTACAG +
Preference number: 3 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLFWTME*SSNLLQ
Trigger: CTGTAAAAGATTGGATGACAACTCCATTGTCCAGAA...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 3 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TTACATTTTCCACAGGGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTGGATGCGAGCAGGAGGCTaGCTCTCCTCTGGACATTGT +
Preference number: 3 (lower is better)
Translates to: LHFPQGNAFVRTSIHFLWMRAGG*LSSGHC
Trigger: ACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCAT...CCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACCCTGTGGAAAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TTGGTGACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCCGAAGTTAAAATAATATaGAAATCCTGTCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LVTQRLLLLRHQSSLHTSEVKII*KSCQLG
Trigger: CCCCAGCTGACAGGATTTCAATATTATTTTAACTTC...GGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGTTTCCTGTGTTGTTaGGATCTCTCAGATCTGGCA +
Preference number: 3 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCSFLCC*DLSDLA
Trigger: TGCCAGATCTGAGAGATCCAAACAACACAGGAAACT...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGAAATCTCAGCCTCCCTaGCACAATGGCAAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKKSQPP*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TTACATTTTCCACAGGGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTGGAAATCTCAGCCTCCCTaGCACAATGGCAAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LHFPQGNAFVRTSIHFLWKSQPP*HNGKLA
Trigger: GGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTT...CCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACCCTGTGGAAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GGATTCTGGTTCATCTGTCGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 3 (lower is better)
Translates to: GFWFICRSLVVKSCPRNIGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...GATGTTTCGGGGACAGCTTTTCACTACAAGAGACCGACAGATGAACCAGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CAA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGAGAACAATCCGATGCTaGAATCCTGAACCACATTTA +
Preference number: 3 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLRTIRC*NPEPHL
Trigger: TAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AGAACAATCCGATGCTTGAATCCTGAACCACATTTAGGAGTACATTCGGACCAGGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 3 (lower is better)
Translates to: RTIRCLNPEPHLGVHSDQERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...CTGGTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp AACAATCTAGTTGTTGAATCTTTTGATGGCAACGTGTaGAGCGTGAAGGTGGGAAGGCCCACGCGAGTCATT +
Preference number: 3 (lower is better)
Translates to: NNLVVESFDGNV*SVKVGRPTRVI
Trigger: AATGACTCGCGTGGGCCTTCCCACCTTCACGCTTCACACGTTGCCATCAAAAGATTCAACAACTAGATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR GCA 72 bp CCAGGAGAAGGGATTGGTATTTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTCATGACCTTTCGTCCC +
Preference number: 3 (lower is better)
Translates to: PGEGIGICSNMS*HKFCCLMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR CCA 72 bp GGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTaGGTGGTTCTCTTTGATGGACGCATTTCCACGATG +
Preference number: 3 (lower is better)
Translates to: GNAFVRTSIHFL*VVLFDGRISTM
Trigger: CATCGTGGAAATGCGTCCATCAAAGAGAACCACCCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTAGCAAGTTTCCTGTGTaGTTTGGATCTCTCAGATCT +
Preference number: 3 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLSKFPV*FGSLRS
Trigger: AGATCTGAGAGATCCAAACAACACAGGAAACTTGCT...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CATCAATACTCTGGGGCCATGTGCCAAAAGGAACACAATCTCCCTGATAACACCAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATA +
Preference number: 3 (lower is better)
Translates to: HQYSGAMCQKEHNLPDNTSVPQG*FLYVQI
Trigger: TATCTGCACGTATAAAAACAAGCCCTGTGGAACACT...GGTGTTATCAGGGAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTATTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CAA 90 bp TCAAAGTCTGCACACTGTTTTTCTCGAAAATCTCGGGAACCCAAAGGGCATGGAAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 3 (lower is better)
Translates to: SKSAHCFSRKSREPKGHGKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...TCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAAAAACAGTGTGCAGACTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
3UTR-3UTR CAA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACTTTATGAACAGAGCCTCTaGGTATCTGAACCACTTCCA +
Preference number: 3 (lower is better)
Translates to: SLAGLTTHLSEVCSTAELYEQSL*VSEPLP
Trigger: TGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATA...AAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp CAATGGAGTTGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCAGGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTT +
Preference number: 3 (lower is better)
Translates to: QWSCHPIFYRPLLVFGHQALLWT*CSWECF
Trigger: AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGC...CTGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGGAGCTTTTCTTCTTaGGTTGTTATCCTTCCCTAC +
Preference number: 3 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSWSFSS*VVILPY
Trigger: GTAGGGAAGGATAACAACCAAAGAAGAAAAGCTCCA...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR TCA 72 bp TACGTGCTTGCATTCTCCATTGATACAGATATCCAGTaGGTCTGCATTGCACTGTGTCCCATCTATCACAGC +
Preference number: 3 (lower is better)
Translates to: YVLAFSIDTDIQ*VCIALCPIYHS
Trigger: GCTGTGATAGATGGGACACAGTGCAATGCAGACTCACTGGATATCTGTATCAATGGAGAATGCAAGCACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp ATAAATGCCCTTCTACCATATCAAAGAAGGGACATCTaGAACCCATCGGACTGTCAGCAAATGGTAAAGGGC +
Preference number: 3 (lower is better)
Translates to: INALLPYQRRDI*NPSDCQQMVKG
Trigger: GCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAGGGCATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCAGAAGTTAAAATAATATaGAAATCCTGTCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: MEISASLAQWQVGHRLLAEVKII*KSCQLG
Trigger: CCCCAGCTGACAGGATTTCAATATTATTTTAACTTC...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCAGCCAGGCAATTAGCAAGTTTCCTGTGTaGTTTGGATCTCTCAGATCT +
Preference number: 3 (lower is better)
Translates to: YHSRSSLCVEIIAFSQAISKFPV*FGSLRS
Trigger: AGATCTGAGAGATCCAAACAACACAGGAAACTTGCT...AATTGCCTGGCTGAAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGGTAAAACTGAGTTTATAGACTaGCACAGCTGCAGCAATTGC +
Preference number: 3 (lower is better)
Translates to: TISKKGHLEPIGLSANGKTEFID*HSCSNC
Trigger: GCAATTGCTGCAGCTGTGCAAGTCTATAAACTCAGT...TTTACCATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AGCTTCCAAGGATTCTGGTTCATCTGTCGGTCTCTTGTAGTGAAAAGCTGTCCCATACTGGAAACGACATaGTTCATCAGCATCATACAC +
Preference number: 3 (lower is better)
Translates to: SFQGFWFICRSLVVKSCPILETT*FISIIH
Trigger: GTGTATGATGCTGATGAACAATGTCGTTTCCAGTAT...GGGACAGCTTTTCACTACAAGAGACCGACAGATGAACCAGAATCCTTGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCATGCATTGGCGGGATGTaGCTCCATACTGGAAACGAC +
Preference number: 3 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPCIGGM*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCA...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGTTCCCCATATTTGCATaGGCGGGATGTTGCTCCATA +
Preference number: 3 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKFPIFA*AGCCSI
Trigger: TATGGAGCAACATCCCGCCAATGCAAATATGGGGAA...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCAGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACAGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 3 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACAGCAAGGGTGTTGGCTTaGAAGGAAGCCAACTGTCCT +
Preference number: 3 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTARVLA*KEANCP
Trigger: AGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGC...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTT +
Preference number: 3 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVALLWT*CSWECF
Trigger: AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGC...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp TATCTGAACCACTTCCATATAACCTCCTCTGGGCAATaGGTCATTGAAGAACCCTTCAATGGCATCACAGGT +
Preference number: 3 (lower is better)
Translates to: YLNHFHITSSGQ*VIEEPFNGITG
Trigger: ACCTGTGATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCAGAGGAGGTTATATGGAAGTGGTTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp AAGAACTGCATTATCGTGGTGGGCAATCCCATTTTCTaGAATGGTGTTTCCATCACTTTGGTGGGAGAGAAT +
Preference number: 3 (lower is better)
Translates to: KNCIIVVGNPIF*NGVSITLVGEN
Trigger: ATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CAA 90 bp TGTCCTTGGCAGGTCTTACAACACATCTGTCTGAAGTATGCTCGACTGCAGAACGAAGTTAAAATAATATaGAAATCCTGTCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: CPWQVLQHICLKYARLQNEVKII*KSCQLG
Trigger: CCCCAGCTGACAGGATTTCAATATTATTTTAACTTC...GTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGATACTGGAAACGACATaGTTCATCAGCATCATACAC +
Preference number: 3 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQILETT*FISIIH
Trigger: GTGTATGATGCTGATGAACAATGTCGTTTCCAGTAT...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp TTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACACTCATATATGAACAGAGCCTCTaGGTATCTGAACCACTTCCA +
Preference number: 3 (lower is better)
Translates to: FDCWRREFEWDCGKHTLIYEQSL*VSEPLP
Trigger: TGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATA...TATGAGTGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATTCAGGATCACAGAAATaGTTCTGGACAATGGAGTTG +
Preference number: 3 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYSGSQK*FWTMEL
Trigger: CAACTCCATTGTCCAGAACAATTTCTGTGATCCTGA...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTGACAGTTCTCATTTGTaGTCCAAGACCACACTGAGC +
Preference number: 3 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVDSSHL*SKTTLS
Trigger: GCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTC...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR GCA 72 bp TTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATaGTTGAATCCTGAACCACATTTAGGAGTACATTCG +
Preference number: 3 (lower is better)
Translates to: LERSLLLHRTIR*LNPEPHLGVHS
Trigger: CGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp ATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTaGATCAATAAATCCCACTTCACAGAAGTTAAAATA +
Preference number: 3 (lower is better)
Translates to: IWQSLLIPCPAL*INKSHFTEVKI
Trigger: TATTTTAACTTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp AAAGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATaGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTA +
Preference number: 3 (lower is better)
Translates to: KVLMEISASLAQ*QVGHRLLALSL
Trigger: TAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp GGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTaGTATCTGAACCACTTCCATATAACCTCCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GNFSYFNMNRAS*YLNHFHITSSG
Trigger: CCCAGAGGAGGTTATATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp TCAGGTGGCTTACTGTCAGGATCACAGAAATTGTTCTaGACAATGGAGTTGTCATCCAATCTTTTACAGACC +
Preference number: 3 (lower is better)
Translates to: SGGLLSGSQKLF*TMELSSNLLQT
Trigger: GGTCTGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAAGCCACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 3 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR-3UTR CAA 90 bp TCTGTGCCTGGTATGAAATTTCACTCCATCAAGTGTTACAATGACTTTCATTTTTGCATTGGCGGGATGTaGCTCCATACTGGAAACGAC +
Preference number: 3 (lower is better)
Translates to: SVPGMKFHSIKCYNDFHFCIGGM*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCA...AAAATGAAAGTCATTGTAACACTTGATGGAGTGAAATTTCATACCAGGCACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
3UTR GCA 72 bp GGTATTTGCAGTAATATGAGCTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCCACAAGAATTTCCAAT +
Preference number: 3 (lower is better)
Translates to: GICSNMSCHKFC*LMTFRPTRISN
Trigger: ATTGGAAATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR GCA 72 bp ATTGGTATTTGCAGTAATATGAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGTCCCACAAGAATTTCC +
Preference number: 3 (lower is better)
Translates to: IGICSNMSCHKF*CLMTFRPTRIS
Trigger: GGAAATTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCTCATATTACTGCAAATACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
3UTR-3UTR CAA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 3 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTCAGCAGAGATACTCATaGTGCCAAGATGTATTTACC +
Preference number: 3 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVQQRYS*CQDVFT
Trigger: GGTAAATACATCTTGGCACAATGAGTATCTCTGCTG...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR-3UTR CAA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGGAAGTTAAAATAATATaGAAATCCTGTCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKEVKII*KSCQLG
Trigger: CCCCAGCTGACAGGATTTCAATATTATTTTAACTTC...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR TCA 72 bp AAATATTATCACAACCTACGTGCTTGCATTCTCCATTaGTACAGATATCCAGTGAGTCTGCATTGCACTGTG +
Preference number: 3 (lower is better)
Translates to: KYYHNLRACILH*YRYPVSLHCTV
Trigger: CACAGTGCAATGCAGACTCACTGGATATCTGTATCAATGGAGAATGCAAGCACGTAGGTTGTGATAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp CAGATATCATATCTAGTAATAAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCTGGAATGGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: QISYLVIRTALS*WAIPFSGMVFP
Trigger: TGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CCA 72 bp GGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTaGTATCTGAACCACTTCCATATAACCTTGCATTCT +
Preference number: 3 (lower is better)
Translates to: GNFSYFNMNRAS*YLNHFHITLHS
Trigger: AGAATGCAAGGTTATATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223562.2
3UTR-3UTR CAA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACAATGGGAACATTGAACTaGTACCTAATTCCCAAATTC +
Preference number: 3 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTMGTLN*YLIPKF
Trigger: GAATTTGGGAATTAGGTACAAGTTCAATGTTCCCAT...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CCA 72 bp ATATCATATCTAGTAATAAGAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGAATGGTGTTTCCATCA +
Preference number: 3 (lower is better)
Translates to: ISYLVIRTALSW*AIPFSGMVFPS
Trigger: TGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR GCA 72 bp TTTATACGTGCAGATATCATATCTAGTAATAAGAACTaGATTATCGTGGTGGGCAATCCCATTTTCTGGAAT +
Preference number: 3 (lower is better)
Translates to: FIRADIISSNKN*IIVVGNPIFWN
Trigger: ATTCCAGAAAATGGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACGTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR GCA 72 bp ATGTGTTATGGAAGATGCTCTTCATTTTGTGTAACCTaGTCAAGTTTAAATTCAGAGTCTACTTTGAGAATG +
Preference number: 3 (lower is better)
Translates to: MCYGRCSSFCVT*SSLNSESTLRM
Trigger: CATTCTCAAAGTAGACTCTGAATTTAAACTTGAGCAGGTTACACAAAATGAAGAGCATCTTCCATAACACAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCCTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGLRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTACACTGCTGCATGGATaGAGGCCGGACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AAQPPLLIPLLPRRTEMATLLHG*RPDSFW
Trigger: CCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGT...AGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCAAGGTCCAACTTTCCTaGTGCAGAGCACGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGKVQLS*CRARPL
Trigger: CAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTTTGCTGTCACACTGCTaGATGGATGGAGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLLLSHC*MDGGRT
Trigger: TGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAA...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLARPDSF*TVNRRL
Trigger: CAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCT...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTGCTGTCACACTGCTGCATaGATGGAGGCCGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: SPASAADPTVTTEDRDGCCHTAA*MEAGQF
Trigger: AAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACA...GCAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTAGGCAGCGGCCCAGACTaGAGCGGATGCGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLGSGPD*SGCEQE
Trigger: CTCCTGCTCGCATCCGCTGCAGTCTGGGCCGCTGCC...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTAGGCTTGCTCTCCTCTaGACATTGTGCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLARLALL*TLCSWE
Trigger: TTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCT...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGCCAGTGAGTCTGCATTaGACTGTGTCCCATCTATCA +
Preference number: 4 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLPVSLH*TVSHLS
Trigger: TGATAGATGGGACACAGTGCAATGCAGACTCACTGG...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TCTGGGCCAGGCTCCCATGTGTTGCCTTCCTTTAGTGGAATGGCTGGGATGGTAAGAGCACGGCCCTTGTaGGCATCCCACCATCACAAG +
Preference number: 4 (lower is better)
Translates to: SGPGSHVLPSFSGMAGMVRARPL*ASHHHK
Trigger: CTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCT...TACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGCCAGACTGCAGCGGATaGGAGCAGGAGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRPDCSG*EQEACS
Trigger: AGAGCAAGCCTCCTGCTCGCATCCGCTGCAGTCTGG...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTGCACTCTTCAGTACTaGAGAGAGGGGTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLACTLQY*REGCYH
Trigger: GTGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCA...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGTCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCGTAGAACCATTACAATaGGGTTCTCAGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGVEPLQ*GSQRWV
Trigger: GACCCACCTCTGAGAACCTCATTGTAATGGTTCTAC...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTGTGTTGCAGGCTCTTTaGTTTTCAGGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLVLQAL*FSGGLL
Trigger: CAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACAC...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTCCAGTGAGTCTGCATTaGACTGTGTCCCATCTATCA +
Preference number: 4 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLPVSLH*TVSHLS
Trigger: TGATAGATGGGACACAGTGCAATGCAGACTCACTGG...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTAGAGCACGGCCCTTGTaGGCATCCCACCATCACAAG +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCRARPL*ASHHHK
Trigger: CTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCT...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTGACATGACTGGTTGTTaGAGGACTCTTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLDMTGC*RTLSPQ
Trigger: CTGTGGAGAAAGAGTCCTGCAACAACCAGTCATGTC...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ACTAAGGAGGTGTGCTTGACACAAAGCACATTCACCAACAACCTACTACACGCTGGCAGCGGCCCAGACTaGAGCGGATGCGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TKEVCLTQSTFTNNLLHAGSGPD*SGCEQE
Trigger: CTCCTGCTCGCATCCGCTGCAGTCTGGGCCGCTGCC...AGCGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCCCCATATTTGCATTaGCGGGATGTTGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLASPYLH*RDVAPY
Trigger: GTATGGAGCAACATCCCGCCAATGCAAATATGGGGA...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTGAACTTCAGCACCAGTaGGCAATAAGCCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: AAQPPLLIPLLPRRTEMAELQHQ*AISHFV
Trigger: AACAAAGTGGCTTATTGCCCACTGGTGCTGAAGTTC...AGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGAAGGTCCAACTTTCCTaGTGCAGAGCACGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRKVQLS*CRARPL
Trigger: CAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTT...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTCCGATGCTTGAATCCTaGACCACATTTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLAPMLES*TTFRST
Trigger: TGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGG...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAAGACCACACTaGGCAGAGCACTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPCPRPH*AEHWPQ
Trigger: CTGGGGCCAGTGCTCTGCTCAGTGTGGTCTTGGACA...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ACAACATTTGGAGTGCCTGCCAGGGCAGCCCAGCCTCCGCTGCTGATCCCACTGATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TTFGVPARAAQPPLLIPLIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...CAGTGGGATCAGCAGCGGAGGCTGGGCTGCCCTGGCAGGCACTCCAAATGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCCTTCATTATCTCCACTaGCAGTACGAACGATGGGAA +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGLHYLH*QYERWE
Trigger: TTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAG...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLALLWTL*SWECFR
Trigger: TCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAG...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLATALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CAA 72 bp GACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGCAAGTACCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: DLGPQLDKESHA*EAHYQGKYHGL
Trigger: CAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp GCAGCTGGAATACTGTTGGTGACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCTCTACACACTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AAGILLVTQRLL*LRHQSSLHTSP
Trigger: TGGGGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp CCCTCAGCAGCTGGAATACTGTTGGTGACACAGCGGTaGCTTTTGCTGAGGCACCAGAGCTCTCTACACACT +
Preference number: 4 (lower is better)
Translates to: PSAAGILLVTQR*LLLRHQSSLHT
Trigger: AGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp AGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTaGCTGCACTCCAACCAGTCTCCAATGAACCATTCA +
Preference number: 4 (lower is better)
Translates to: STALVRIPPSQV*LHSNQSPMNHS
Trigger: TGAATGGTTCATTGGAGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp GCGGATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTTAGAAAGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: ADASRRLALLWT*CSWECFRKVTA
Trigger: AGCAGTGACCTTTCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LTAARAWCFSLCHALGLARDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...AGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTCCACTGAGGTGGACATaGCTGGTTGTTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTPLRWT*LVVAGL
Trigger: GAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGG...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGTCCAAAGCTACCCACTaGGGTGGACATGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRSKATH*GGHDWL
Trigger: CAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGA...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAACTCGACTGCAGAACTTaGACTTCAGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQLDCRT*TSAPVG
Trigger: GCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAG...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGCTCGACTGCAGAACTTaGACTTCAGCACCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLLDCRT*TSAPVG
Trigger: GCCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAG...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCCTCCGCAGGTCCTACTaGACTCGCCCCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGLRRSY*TRPTVT
Trigger: GGTCACTGTGGGGCGAGTGCAGTAGGACCTGCGGAG...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGCAATGGCATCACAGGTaGTTCCATCCCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLQWHHR*FHPHHR
Trigger: TCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTG...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTTTCAGGCTCACACATTCCAGCCACAGAGGCTAAGCCCAGTGTTCCACAGGGCAGACACTGCCTGCTGTaGATCAAGAAGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: LSGSHIPATEAKPSVPQGRHCLL*IKKVHT
Trigger: AGTATGGACCTTCTTGATCCACAGCAGGCAGTGTCT...GCCCTGTGGAACACTGGGCTTAGCCTCTGTGGCTGGAATGTGTGAGCCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
CDS-3UTR CCA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGCCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp GCATTGGCGGGATGTTGCTCCATACTGGAAACGACATaGTTCATCAGCATCATACACCTGACCTGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALAGCCSILETT*FISIIHLTWGH
Trigger: GTGGCCCCAGGTCAGGTGTATGATGCTGATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp TGTCTTTGGACACCAGTCCATGAAGCAGCAAGGGTGTaGGCTTTGAAGGAAGCCAACTGTCCTGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: CLWTPVHEAARV*ALKEANCPALP
Trigger: TGGGAGAGCAGGACAGTTGGCTTCCTTCAAAGCCAACACCCTTGCTGCTTCATGGACTGGTGTCCAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp CCAAGGGAATTCAAGTCTGGGCCAGGCTCCCATGTGTaGCCTTCCTTTAGTGGAATGGCTGGGATGGTACTT +
Preference number: 4 (lower is better)
Translates to: PREFKSGPGSHV*PSFSGMAGMVL
Trigger: AAGTACCATCCCAGCCATTCCACTAAAGGAAGGCAACACATGGGAGCCTGGCCCAGACTTGAATTCCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CTCTTCAGAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACTATAAAATTCCGATaGGGCCATGATGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LFRRSNFPDAEHGPCAHPTIKFR*GHDEAQ
Trigger: CTGAGCCTCATCATGGCCTCATCGGAATTTTATAGT...GGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTATATTTCCCACCTCCTaGAGGTGCTGGACTGTCACA +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCIFPTS*RCWTVT
Trigger: TGTGACAGTCCAGCACCTTCAGGAGGTGGGAAATAT...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGATATTTCCCACCTCCTaGAGGTGCTGGACTGTCACA +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRIFPTS*RCWTVT
Trigger: TGTGACAGTCCAGCACCTTCAGGAGGTGGGAAATAT...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCCACCATCACAAGTCTTaGTGCACTCCAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: WISQIWQSLLIPCPALWIHHHKS*CTPTSL
Trigger: GAGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTG...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGCACCATCACAAGTCTTaGTGCACTCCAACCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FPHGIISISSPCMQQPSRHHHKS*CTPTSL
Trigger: GAGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTG...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CTTTCAGGCTCACACATTCCAGCCACAGAGGCTAAGCCCAGTGTTCCACAGGGCAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSGSHIPATEAKPSVPQGKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...GCCCTGTGGAACACTGGGCTTAGCCTCTGTGGCTGGAATGTGTGAGCCTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
CDS-3UTR TCA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTTTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGAGTTTTGCTGCCTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACT...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTATCAGCATCATACACCTaGCCTGGGGCCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVSASYT*PGATAG
Trigger: TCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGA...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCAGCGGTTGCTTTTGCTaGGGCACCAGAGCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSSGCFC*GTRALY
Trigger: GTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCT...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGCTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: EISASLAQWQVGHRLLALLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAATCAATATTCCCAGTCTaGCACAGTGTCCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQSIFPV*HSVPSA
Trigger: TGCTGAGGGGACACTGTGTCAGACTGGGAATATTGA...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGACCTCCTCTGGGCAATaGGTCATTGAAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: EISASLAQWQVGHRLLALTSSGQ*VIEEPF
Trigger: GAAGGGTTCTTCAATGACTCATTGCCCAGAGGAGGT...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp CTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTGTCCAAGACCACACTaGGCAGAGCACTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LERTQTLHSKQVSCVVWICPRPH*AEHWPQ
Trigger: CTGGGGCCAGTGCTCTGCTCAGTGTGGTCTTGGACA...GATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCCHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp ACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTGCATTGGCGGGATGTTaGTCCATACTGGAAACGACA +
Preference number: 4 (lower is better)
Translates to: TCTAAAIAAQLQTKSLTVALAGC*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC...AACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTACACTTCCCCATATTTaGATTGGCGGGATGTTGCTC +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCTLPHI*IGGMLL
Trigger: GAGCAACATCCCGCCAATGCAAATATGGGGAAGTGT...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCTGCGAGCAGGAGGCTTaGTCTCCTCTGGACATTGTG +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCCEQEA*SPLDIV
Trigger: CACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCA...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTTGCTGTCACACTGCTaGATGGATGGAGGCCGGACA +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSLLSHC*MDGGRT
Trigger: TGTCCGGCCTCCATCCATGCAGCAGTGTGACAGCAA...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTAGACACTGCCTGCTGTaGATCAAGAAGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCRHCLL*IKKVHT
Trigger: AGTATGGACCTTCTTGATCCACAGCAGGCAGTGTCT...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATCCCCCATCAATACTCTaGGGCCATGTGCCAAAAGGA +
Preference number: 4 (lower is better)
Translates to: AQLQQLLRSFKPSPSLFNPPSIL*GHVPKG
Trigger: TCCTTTTGGCACATGGCCCCAGAGTATTGATGGGGG...ATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTAATGAACCATTCAGGTaGGCAAGGCTCAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCNEPFR*ARLSVA
Trigger: TGCAACACTGAGCCTTGCCCACCTGAATGGTTCATT...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTACACTGCTGCATGGATaGAGGCCGGACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLTLLHG*RPDSFW
Trigger: CCAGAAACTGTCCGGCCTCCATCCATGCAGCAGTGT...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp CTGTCCAGTATAGGAAAGGCACTGGACAGTTCTCATTaGTTGTCCAAGACCACACTGAGCAGAGCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LSSIGKALDSSH*LSKTTLSRALA
Trigger: GGCCAGTGCTCTGCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTCCAGTGCCTTTCCTATACTGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TTGGTGACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCCACTATAAAATTCCGATaGGGCCATGATGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVTQRLLLLRHQSSLHTSTIKFR*GHDEAQ
Trigger: CTGAGCCTCATCATGGCCTCATCGGAATTTTATAGT...GGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ATTTCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGAAGTTTTGCTGCCTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: ISHLLKVLDCHSVLETRRSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACT...TCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGCGGTTGCTTTTGCTaGGGCACCAGAGCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGSGCFC*GTRALY
Trigger: GTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCT...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATTCAATATTCCCAGTCTaGCACAGTGTCCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AQLQQLLRSFKPSPSLFNSIFPV*HSVPSA
Trigger: TGCTGAGGGGACACTGTGTCAGACTGGGAATATTGA...ATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTGTGTTGCAGGCTCTTTaGTTTTCAGGTGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTVLQAL*FSGGLL
Trigger: CAGTAAGCCACCTGAAAATCAAAGAGCCTGCAACAC...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp CAGCATCATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTTGTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: QHHTPDLGPQLDKESHALCHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...CAAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: STSSRALRPGLISPHEANCSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTCAATGGCATCACAGGTaGTTCCATCCCCACCACAGA +
Preference number: 4 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLQWHHR*FHPHHR
Trigger: TCTGTGGTGGGGATGGAAGCACCTGTGATGCCATTG...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGCCAGACTGCAGCGGATaGGAGCAGGAGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWPDCSG*EQEACS
Trigger: AGAGCAAGCCTCCTGCTCGCATCCGCTGCAGTCTGG...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TCCCTCCTGATACCGTGTCCAGCACTTTGGATCAATAAATCCCACTTCACAGAACATTTGCTGTCACACTaGTGCATGGATGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLLIPCPALWINKSHFTEHLLSH*CMDGGR
Trigger: CCGGCCTCCATCCATGCAGCAGTGTGACAGCAAATG...TTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAAGACACTGCCTGCTGTaGATCAAGAAGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQRHCLL*IKKVHT
Trigger: AGTATGGACCTTCTTGATCCACAGCAGGCAGTGTCT...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATATCATACACCTGACCTaGGGCCACAGCTGGATAAAG +
Preference number: 4 (lower is better)
Translates to: AQLQQLLRSFKPSPSLFNIIHLT*GHSWIK
Trigger: CTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGAT...ATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTCCCCATATTTGCATTaGCGGGATGTTGCTCCATAC +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTSPYLH*RDVAPY
Trigger: GTATGGAGCAACATCCCGCCAATGCAAATATGGGGA...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTAATTGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: AQLQQLLRSFKPSPSLFNCPLSS*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACA...ATTAAACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAAATGAACCATTCAGGTaGGCAAGGCTCAGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQNEPFR*ARLSVA
Trigger: TGCAACACTGAGCCTTGCCCACCTGAATGGTTCATT...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTAGGCCGGACAGTTTCTaGACAGTCAACAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTRPDSF*TVNRRL
Trigger: CAGGCGTCTGTTGACTGTCCAGAAACTGTCCGGCCT...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTTGTCACACTGCTGCATaGATGGAGGCCGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLCHTAA*MEAGQF
Trigger: AAACTGTCCGGCCTCCATCCATGCAGCAGTGTGACA...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp GCACCAGAGCTCTCTACACACTTCCCCATATTTGCATaGGCGGGATGTTGCTCCATACTGGAAACGACATTG +
Preference number: 4 (lower is better)
Translates to: APELSTHFPIFA*AGCCSILETTL
Trigger: CAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGGGAAGTGTGTAGAGAGCTCTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ATCAGCATCATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: ISIIHLTWGHSWIKKVTLVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACCTCCAGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAATCTCCAAGTTTGGCTaGTCTTCAGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: TSSTSSRALRPGLISPHEISKFG*SSVRTI
Trigger: AATTGTTCTCACTGAAGATCAGCCAAACTTGGAGAT...TTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AGCACAAGTAGCAGAGCACTCCGCCCAGGGCTGATAAGTCCACATGAAGCCAACTTCATACCAAAATTGTaGCCAATCTCATGTGCGATG +
Preference number: 4 (lower is better)
Translates to: STSSRALRPGLISPHEANFIPKL*PISCAM
Trigger: CATCGCACATGAGATTGGTCACAATTTTGGTATGAA...GTTGGCTTCATGTGGACTTATCAGCCCTGGGCGGAGTGCTCTGCTACTTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCAGTTTTGCTGCCTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACT...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGACTGGAATACTGTTGGTaGCACAGCGGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: SQMEGLTICFVSLIASSGLEYCW*HSGCFC
Trigger: GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAG...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGGTAAACCACTGAGGTGGACATaGCTGGTTGTTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: TISKKGHLEPIGLSANGKPLRWT*LVVAGL
Trigger: GAGTCCTGCAACAACCAGTCATGTCCACCTCAGTGG...TTTACCATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGCATTGGCGGGATGTTaGTCCATACTGGAAACGACA +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSALAGC*SILETT
Trigger: TGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTGGCATGGATCTGTGTTaGAAGAGCGGTAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTGMDLC*KSGSVS
Trigger: GGAAACGCTACCGCTCTTGCAACACAGATCCATGCC...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAGGCATGGATCTGTGTTaGAAGAGCGGTAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVGMDLC*KSGSVS
Trigger: GGAAACGCTACCGCTCTTGCAACACAGATCCATGCC...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTAAAGGTCACTGCTCTTaGACAGAACAATCCGATGCT +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTKGHCS*TEQSDA
Trigger: AGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTCTCCTCTGGACATTGTaGAGCTGGGAATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTLLWTL*SWECFR
Trigger: TCTAAAACATTCCCAGCTGCACAATGTCCAGAGGAG...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCACAAGTCTTCAACGTTTCCTAGACTaGAGTCACGATAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: NFPDAEHGPCAHPTITSLQRFLD*SHDKVW
Trigger: CCAAACTTTATCGTGACTCCAGTCTAGGAAACGTTG...AAGACTTGTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: WISQIWQSLLIPCPALWIVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CAAGTACCACGGCCTGAACTGCAAAGCCGTCTTCGGAAAACATCAGAAGCTGGCAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QVPRPELQSRLRKTSEAGRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...GCCAGCTTCTGATGTTTTCCGAAGACGGCTTTGCAGTTCAGGCCGTGGTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAACCTGGGGCCACAGCTaGATAAAGAAAGTCACGCTT +
Preference number: 4 (lower is better)
Translates to: SQMEGLTICFVSLIASSGTWGHS*IKKVTL
Trigger: AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGT...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp TCCCTCCTGATACCGTGTCCAGCACTTTGGATCAATAAATCCCACTTCACAGAAGGAACCCAAAGGGCATaGATCTGTGTTGCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SLLIPCPALWINKSHFTEGTQRA*ICVARA
Trigger: CGCTCTTGCAACACAGATCCATGCCCTTTGGGTTCC...TTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCCCCATAATCTCCAAGTTTGGCTaGTCTTCAGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: DTAVAFAEAPELSTHFPIISKFG*SSVRTI
Trigger: AATTGTTCTCACTGAAGATCAGCCAAACTTGGAGAT...TATGGGGAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CGGTCTCTTGTAGTGAAAAGCTGTCCCCGAAACATCAAATTTCCTAGGCCAGTCAGTTTTGCTGCCTCATaGCCTTTCGTCCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: RSLVVKSCPRNIKFPRPVSFAAS*PFVPQE
Trigger: TTCTTGTGGGACGAAAGGTCATGAGGCAGCAAAACT...GACTGGCCTAGGAAATTTGATGTTTCGGGGACAGCTTTTCACTACAAGAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCGATACAGATATCCAGTaGGTCTGCATTGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSDTDIQ*VCIALC
Trigger: ACACAGTGCAATGCAGACTCACTGGATATCTGTATC...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTACAACACATCTGTCTaGAGTATGCTCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPYNTSV*SMLDCR
Trigger: TCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTA...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: EISASLAQWQVGHRLLALIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPSCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLCSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CAATGCACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGTAGCAGATACTCTGGGGCCATGTaGCAAAAGGAACACAATCTC +
Preference number: 4 (lower is better)
Translates to: QCTSWREHRLISYPSSSRYSGAM*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTA...TCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTTCATTATCTCCACTaGCAGTACGAACGATGGGAA +
Preference number: 4 (lower is better)
Translates to: MEISASLAQWQVGHRLLALHYLH*QYERWE
Trigger: TTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAG...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCAAAGGTCACTGCTCTTaGACAGAACAATCCGATGCT +
Preference number: 4 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTKGHCS*TEQSDA
Trigger: AGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTT...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TTACATTTTCCACAGGGTAATGCTTTTGTAAGGACATCCATCCACTTCCTCTGGTGCGAGCAGGAGGCTTaGTCTCCTCTGGACATTGTG +
Preference number: 4 (lower is better)
Translates to: LHFPQGNAFVRTSIHFLWCEQEA*SPLDIV
Trigger: CACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCA...CCAGAGGAAGTGGATGGATGTCCTTACAAAAGCATTACCCTGTGGAAAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGCAACGTTTCCTAGACTaGAGTCACGATAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLQRFLD*SHDKVW
Trigger: CCAAACTTTATCGTGACTCCAGTCTAGGAAACGTTG...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp ATTTCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGACAACGTTTCCTAGACTaGAGTCACGATAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: ISHLLKVLDCHSVLETRRQRFLD*SHDKVW
Trigger: CCAAACTTTATCGTGACTCCAGTCTAGGAAACGTTG...TCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GTTGGTGACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VGDTAVAFAEAPELSTHFVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...GAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTGATGTTGCTCCATACTaGAAACGACATTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCDVAPY*KRHCSS
Trigger: TGATGAACAATGTCGTTTCCAGTATGGAGCAACATC...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTTGTCCCCTCAGCAGCTaGAATACTGTTGGTGACACA +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTCPLSS*NTVGDT
Trigger: TGTGTCACCAACAGTATTCCAGCTGCTGAGGGGACA...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAGTAGCCTGTCCACTGTGCCAATGCACTTCCTGGAGAGAGCATAGACTGATCTCACAGAAATTGTTCTaGACAATGGAGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: AVACPLCQCTSWREHRLISQKLF*TMELSS
Trigger: GGATGACAACTCCATTGTCCAGAACAATTTCTGTGA...GATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CAGAGGCTAAGCCCAGTGTTCCACAGGGCTTGTTTTTATACGTGCAGATATCATGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: QRLSPVFHRACFYTCRYHVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...ATGATATCTGCACGTATAAAAACAAGCCCTGTGGAACACTGGGCTTAGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
CDS-3UTR TCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACTAAGGAGGTGTGCTTGACACAAAGCACATTCACCAACAACCTACTACACGCTGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: TKEVCLTQSTFTNNLLHAVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...AGCGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CAATGCACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGTAGCAGATTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: QCTSWREHRLISYPSSSRLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...TCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAATCTCCAAGTTTGGCTaGTCTTCAGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQISKFG*SSVRTI
Trigger: AATTGTTCTCACTGAAGATCAGCCAAACTTGGAGAT...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTGTAGAACCATTACAATaGGGTTCTCAGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTVEPLQ*GSQRWV
Trigger: GACCCACCTCTGAGAACCTCATTGTAATGGTTCTAC...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGTCCAAAGCTACCCACTaGGGTGGACATGACTGGTTG +
Preference number: 4 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWSKATH*GGHDWL
Trigger: CAACCAGTCATGTCCACCTCAGTGGGTAGCTTTGGA...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTCCGATGCTTGAATCCTaGACCACATTTAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLPMLES*TTFRST
Trigger: TGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGG...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSSCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPCSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CTTCTACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGACACTTCCCCATATTTaGATTGGCGGGATGTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLPYQRRDIWNPSDCQQMTLPHI*IGGMLL
Trigger: GAGCAACATCCCGCCAATGCAAATATGGGGAAGTGT...CATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTATACTCTGGGGCCATGTaGCAAAAGGAACACAATCTC +
Preference number: 4 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVYSGAM*QKEHNL
Trigger: GAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTA...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCTCCTAGCCATGGGTCATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: SYFGRPLYQWQTLLLAMGHLSEV*STAELE
Trigger: TTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATG...ACCCATGGCTAGGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp TGTCTACCTCACTGGGGGATTATAATGGGGTCACTAACACCATTATCCCAGAGAAGACACTGCCTGCTGTaGATCAAGAAGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: CLPHWGIIMGSLTPLSQRRHCLL*IKKVHT
Trigger: AGTATGGACCTTCTTGATCCACAGCAGGCAGTGTCT...TCTCTGGGATAATGGTGTTAGTGACCCCATTATAATCCCCCAGTGAGGTAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CCLDLSDLAVPPDTVSSTVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...AGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTAAAGAAAGTCACGCTTTaGAGGCTCATTATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLKKVTL*RLIIKA
Trigger: TGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTT...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATGTTGCTCCATACTaGAAACGACATTGTTCATCA +
Preference number: 4 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLDVAPY*KRHCSS
Trigger: TGATGAACAATGTCGTTTCCAGTATGGAGCAACATC...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCATGAACAGAGCCTCTTaGTATCTGAACCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSMNRAS*YLNHFH
Trigger: ATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCAT...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGGACATTGTGCAGCTaGGAATGTTTTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPWTLCS*ECFRKV
Trigger: GACCTTTCTAAAACATTCCCAGCTGCACAATGTCCA...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCTGGACATTGTGCAGCTaGGAATGTTTTAGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSWTLCS*ECFRKV
Trigger: GACCTTTCTAAAACATTCCCAGCTGCACAATGTCCA...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGAGGCTTGCTCTCCTCTaGACATTGTGCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKRLALL*TLCSWE
Trigger: TTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp CCAGCCACAGAGGCTAAGCCCAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATATCATATCTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PATEAKPSVPQG*FLYVQISYLIF
Trigger: GAAGATCAGATATGATATCTGCACGTATAAAAACAAGCCCTGTGGAACACTGGGCTTAGCCTCTGTGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224504.2
CDS-3UTR TCA 90 bp ACTAAGGAGGTGTGCTTGACACAAAGCACATTCACCAACAACCTACTACACGCTACTATAAAATTCCGATaGGGCCATGATGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TKEVCLTQSTFTNNLLHATIKFR*GHDEAQ
Trigger: CTGAGCCTCATCATGGCCTCATCGGAATTTTATAGT...AGCGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GCTGCAGGCAGACCAGGAGAAGGGATTGGTATTTGCAGTAATATGAGCTGCCATGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: AAGRPGEGIGICSNMSCHVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...ATGGCAGCTCATATTACTGCAAATACCAATCCCTTCTCCTGGTCTGCCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
CDS-3UTR TCA 90 bp TCAAAGTCTGCACACTGTTTTTCTCGAAAATCTCGGGAACCCAAAGGGCATGGATTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: SKSAHCFSRKSREPKGHGLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...TCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAAAAACAGTGTGCAGACTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223562.2
CDS-3UTR TCA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGTTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGATCTCCAAGTTTGGCTaGTCTTCAGTGAGAACAATT +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPISKFG*SSVRTI
Trigger: AATTGTTCTCACTGAAGATCAGCCAAACTTGGAGAT...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTATTCATACCAAAATTGTaGCCAATCTCATGTGCGATG +
Preference number: 4 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLFIPKL*PISCAM
Trigger: CATCGCACATGAGATTGGTCACAATTTTGGTATGAA...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCGCTTGCATTCTCCATTaGTACAGATATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCACILH*YRYPVS
Trigger: ACTCACTGGATATCTGTATCAATGGAGAATGCAAGC...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGCTTGCATTCTCCATTaGTACAGATATCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSACILH*YRYPVS
Trigger: ACTCACTGGATATCTGTATCAATGGAGAATGCAAGC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGACCTCCTCTGGGCAATaGGTCATTGAAGAACCCTTC +
Preference number: 4 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKTSSGQ*VIEEPF
Trigger: GAAGGGTTCTTCAATGACTCATTGCCCAGAGGAGGT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCGCTGATAAGTCCACATaGAGCCAACTTCATTATCTC +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCADKST*SQLHYL
Trigger: GAGATAATGAAGTTGGCTTCATGTGGACTTATCAGC...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp TCCCTCCTGATACCGTGTCCAGCACTTTGGATCAATAAATCCCACTTCACAGAATACAACACATCTGTCTaGAGTATGCTCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLIPCPALWINKSHFTEYNTSV*SMLDCR
Trigger: TCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTA...TTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp CTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LERTQTLHSKQVSCVVWICHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...GATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp AAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTAATGCTTCACAGAACAATCCGATaGTTGAATCCTGAACCACAT +
Preference number: 4 (lower is better)
Translates to: KSCQLGLTSGYIFHRVMLHRTIR*LNPEPH
Trigger: ATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTG...AAGCATTACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCCATCTGTCTGAAGTATaGTCGACTGCAGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCHLSEV*STAELE
Trigger: TTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATG...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GCAGTAGCCTGTCCACTGTGCCAATGCACTTCCTGGAGAGAGCATAGACTGATCAGTCACGATAAAGTTTaGCAACAATATTCATCACAC +
Preference number: 4 (lower is better)
Translates to: AVACPLCQCTSWREHRLISHDKV*QQYSSH
Trigger: GTGTGATGAATATTGTTGCCAAACTTTATCGTGACT...GATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCATTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: MEISASLAQWQVGHRLLAFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AGCTTCCAAGGATTCTGGTTCATCTGTCGGTCTCTTGTAGTGAAAAGCTGTCCCAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SFQGFWFICRSLVVKSCPRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...GGGACAGCTTTTCACTACAAGAGACCGACAGATGAACCAGAATCCTTGGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TCCCCACTCAGGAATGTCTGCACACACACACACATACACACACGTATACACTTGAAGAAAGTCACGCTTTaGAGGCTCATTATCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLRNVCTHTHIHTRIHLKKVTL*RLIIKA
Trigger: TGCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTT...CAAGTGTATACGTGTGTGTATGTGTGTGTGTGTGCAGACATTCCTGAGTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp ACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTCCCAAATTCTGTTCTTaGAGTAGAACCATTACAATG +
Preference number: 4 (lower is better)
Translates to: TCTAAAIAAQLQTKSLTVPKFCS*SRTITM
Trigger: CATTGTAATGGTTCTACTCCAAGAACAGAATTTGGG...AACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCTCACAGAAATTGTTCTaGACAATGGAGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSSQKLF*TMELSS
Trigger: GGATGACAACTCCATTGTCCAGAACAATTTCTGTGA...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPSLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp GAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTaGAATCCTGAACCACATTTAGGAGTACATTCGGAC +
Preference number: 4 (lower is better)
Translates to: ERSLLLHRTIRC*NPEPHLGVHSD
Trigger: GTCCGAATGTACTCCTAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp TGTGCAGCTGGGAATGTTTTAGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGCTTGAATCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: CAAGNVLERSLL*HRTIRCLNPEP
Trigger: TGGTTCAGGATTCAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGCTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CCCCATATTTGCATTGGCGGGATGTTGCTCCATACTGGAAACGACATTGTTCATAGGGACTTGTCTGCATaGTGGTTTATCTCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PHICIGGMLLHTGNDIVHRDLSA*WFISKF
Trigger: AAACTTGGAGATAAACCATCATGCAGACAAGTCCCT...ATGAACAATGTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCAAATATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTTCATACCAAAATTGTaGCCAATCTCATGTGCGATG +
Preference number: 4 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSFIPKL*PISCAM
Trigger: CATCGCACATGAGATTGGTCACAATTTTGGTATGAA...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CCACATGAAGCCAACTTCATTATCTCCACTGCCAGTACGAACGATGGGAACATTATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: PHEANFIISTASTNDGNIIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...AATGTTCCCATCGTTCGTACTGGCAGTGGAGATAATGAAGTTGGCTTCATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CAATGGAGTTGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCAGTGCCATAAGTTTTGCTaGCTCATGACCTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: QWSCHPIFYRPLLVFGHQCHKFC*LMTFRP
Trigger: GGGACGAAAGGTCATGAGGCAGCAAAACTTATGGCA...CTGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp CTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: LERTQTLHSKQVSCVVWISCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...GATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp GCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGCCATACTGTCAAAGTCTaGACACTGTTTTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: ASWPQTLSTEFIDLHSCSHTVKV*TLFFSK
Trigger: TTTCGAGAAAAACAGTGTGCAGACTTTGACAGTATG...GCTGCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCGACATGACTGGTTGTTaGAGGACTCTTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCDMTGC*RTLSPQ
Trigger: CTGTGGAGAAAGAGTCCTGCAACAACCAGTCATGTC...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTACACAGAACAATCCGATaGTTGAATCCTGAACCACAT +
Preference number: 4 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVHRTIR*LNPEPH
Trigger: ATGTGGTTCAGGATTCAAGCATCGGATTGTTCTGTG...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACAGACACTGCCTGCTGTaGATCAAGAAGGTCCATACT +
Preference number: 4 (lower is better)
Translates to: DSLGEAPAEILIVPRCIYRHCLL*IKKVHT
Trigger: AGTATGGACCTTCTTGATCCACAGCAGGCAGTGTCT...GTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTTGATTGCTGGAGAAGGGAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: ELCSIPVYCPLTLIAGEGKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...CCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TTATCTCCACTGCCAGTACGAACGATGGGAACATTGAACTTGTACCTAATTCCCAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSPLPVRTMGTLNLYLIPKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCGTACTGGCAGTGGAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGCCAATTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: PTFKIVLEKHQQRYSLCQFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TATCACAGCAGGAGCTCGCTCTGTGTAGAAATTATAGCCTTCAGCCAGGCAATTGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: YHSRSSLCVEIIAFSQAIVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...AATTGCCTGGCTGAAGGCTATAATTTCTACACAGAGCGAGCTCCTGCTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCGTGTTTCCATCACTTTaGTGGGAGAGAATGGATTTC +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGVFPSL*WERMDF
Trigger: GAAATCCATTCTCTCCCACCAAAGTGATGGAAACAC...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CCATTGATACAGATATCCAGTGAGTCTGCATTGCACTGTGTCCCATCTATCACAACTGCATTATCGTGGTaGGCAATCCCATTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLIQISSESALHCVPSITTALSW*AIPFSG
Trigger: TCCAGAAAATGGGATTGCCCACCACGATAATGCAGT...TGTGATAGATGGGACACAGTGCAATGCAGACTCACTGGATATCTGTATCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TCCCCACTCAGGAATGTCTGCACACACACACACATACACACACGTATACACTTGTCTTTGATTTTCAGGTaGCTTACTGTCAGGATCACA +
Preference number: 4 (lower is better)
Translates to: SPLRNVCTHTHIHTRIHLSLIFR*LTVRIT
Trigger: TGTGATCCTGACAGTAAGCCACCTGAAAATCAAAGA...CAAGTGTATACGTGTGTGTATGTGTGTGTGTGTGCAGACATTCCTGAGTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
3UTR CAA 72 bp CCAGCCACAGAGGCTAAGCCCAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATATCATATCTAGTAATA +
Preference number: 4 (lower is better)
Translates to: PATEAKPSVPQG*FLYVQISYLVI
Trigger: TATTACTAGATATGATATCTGCACGTATAAAAACAAGCCCTGTGGAACACTGGGCTTAGCCTCTGTGGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CAA 72 bp TTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTaGGAGAAGCACCAGCAGAGATACTCATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FMKSKQPTFKIV*EKHQQRYSLCQ
Trigger: TTGGCACAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGACTATAAAATTCCGATaGGGCCATGATGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKTIKFR*GHDEAQ
Trigger: CTGAGCCTCATCATGGCCTCATCGGAATTTTATAGT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCACTTCGTTTGCCACTTCCTGTaGGATCTGAAACCCCACAAT +
Preference number: 4 (lower is better)
Translates to: GNFSYFNMNRASWYLNHFVCHFL*DLKPHN
Trigger: ATTGTGGGGTTTCAGATCTCACAGGAAGTGGCAAAC...GAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWWAMSH*RTLQWH
Trigger: ATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCA...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR TCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGTGGGCAATGAGTCATTaGAGAACCCTTCAATGGCAT +
Preference number: 4 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKWAMSH*RTLQWH
Trigger: ATGCCATTGAAGGGTTCTTCAATGACTCATTGCCCA...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR GCA 90 bp TCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCAGTCCATGAAGCAGCATGCAGTAATATGAGCTaGCATAAGTTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SNLLQTTSCLWTPVHEAACSNMS*HKFCCL
Trigger: GAGGCAGCAAAACTTATGGCAGCTCATATTACTGCA...TGCTGCTTCATGGACTGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GGTGGCTTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCGTTTATCTCCAAGTTTaGCTGATCTTCAGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGLLSGSQKLFWTMELSSVYLQV*LIFSEN
Trigger: GTTCTCACTGAAGATCAGCCAAACTTGGAGATAAAC...GGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAAGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GTGTTCATGAAAAGCAAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGTTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: VFMKSKQPTFKIVLEKHQFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...CTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTTGCTTTTCATGAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TCCCCACTCAGGAATGTCTGCACACACACACACATACACACACGTATACACTTGCCCAAATTCTGTTCTTaGAGTAGAACCATTACAATG +
Preference number: 4 (lower is better)
Translates to: SPLRNVCTHTHIHTRIHLPKFCS*SRTITM
Trigger: CATTGTAATGGTTCTACTCCAAGAACAGAATTTGGG...CAAGTGTATACGTGTGTGTATGTGTGTGTGTGTGCAGACATTCCTGAGTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGTGCACTCTTCAGTACTaGAGAGAGGGGTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLCTLQY*REGCYH
Trigger: GTGATAGCACCCCTCTCTCCAGTACTGAAGAGTGCA...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
3UTR CAA 72 bp TCTCCACTGCCAGTACGAACGATGGGAACATTGAACTaGTACCTAATTCCCAAATTCTGTTCTTGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPLPVRTMGTLN*YLIPKFCSWSR
Trigger: TCTACTCCAAGAACAGAATTTGGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCGTACTGGCAGTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp GAACTATGTAGCATCCCAGTATATTGCCCCTTAACTTaGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: ELCSIPVYCPLT*IAGEGSLNGIV
Trigger: CACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAAGTTAAGGGGCAATATACTGGGATGCTACATAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
3UTR CAA 72 bp GGGTTCAATCATTTGGGTATATTTGACATTCCTATTTaGGTAGGCCTTTATACCAGTGGCAGACACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GFNHLGIFDIPI*VGLYTSGRHCS
Trigger: GGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACCCAAATGATTGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCACTTCACTATAAAATTCCGATaGGGCCATGATGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GNFSYFNMNRASWYLNHFTIKFR*GHDEAQ
Trigger: CTGAGCCTCATCATGGCCTCATCGGAATTTTATAGT...GAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GCTGGGAATGTTTTAGAAAGGTCACTGCTCTTGCACAGAACAATCCGATGCTTGTTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: AGNVLERSLLLHRTIRCLLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...CAAGCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAAACATTCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTTGGCTGATCTTCAGTaGGAACAATTAAGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVLADLQ*EQLSEP
Trigger: TGGCTCGCTTAATTGTTCTCACTGAAGATCAGCCAA...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATTTCATACCAAAATTGTaGCCAATCTCATGTGCGATG +
Preference number: 4 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYFIPKL*PISCAM
Trigger: CATCGCACATGAGATTGGTCACAATTTTGGTATGAA...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCTCTAGTAATAAGAACTaGATTATCGTGGTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGSSNKN*IIVVGN
Trigger: ATTGCCCACCACGATAATGCAGTTCTTATTACTAGA...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTAGCTGCCATAAGTTTTaGTGCCTCATGACCTTTCGT +
Preference number: 4 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSSCHKF*CLMTFR
Trigger: ACGAAAGGTCATGAGGCAGCAAAACTTATGGCAGCT...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp TCCCTCCTGATACCGTGTCCAGCACTTTGGATCAATAAATCCCACTTCACAGAACATACTGTCAAAGTCTaGACACTGTTTTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: SLLIPCPALWINKSHFTEHTVKV*TLFFSK
Trigger: TTTCGAGAAAAACAGTGTGCAGACTTTGACAGTATG...TTCTGTGAAGTGGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CCA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGTCACGATAAAGTTTaGCAACAATATTCATCACAC +
Preference number: 4 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCSHDKV*QQYSSH
Trigger: GTGTGATGAATATTGTTGCCAAACTTTATCGTGACT...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp CATCAATACTCTGGGGCCATGTGCCAAAAGGAACACAATCTCCCTGATAACACCAGTCACGATAAAGTTTaGCAACAATATTCATCACAC +
Preference number: 4 (lower is better)
Translates to: HQYSGAMCQKEHNLPDNTSHDKV*QQYSSH
Trigger: GTGTGATGAATATTGTTGCCAAACTTTATCGTGACT...GGTGTTATCAGGGAGATTGTGTTCCTTTTGGCACATGGCCCCAGAGTATTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AGTCAGATGGAGGGCTTGACCATATGCTTTGTATCACTGATAGCCTCCTCTGGAAGTCACGATAAAGTTTaGCAACAATATTCATCACAC +
Preference number: 4 (lower is better)
Translates to: SQMEGLTICFVSLIASSGSHDKV*QQYSSH
Trigger: GTGTGATGAATATTGTTGCCAAACTTTATCGTGACT...TCCAGAGGAGGCTATCAGTGATACAAAGCATATGGTCAAGCCCTCCATCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCCAACGTTTCCTAGACTaGAGTCACGATAAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCQRFLD*SHDKVW
Trigger: CCAAACTTTATCGTGACTCCAGTCTAGGAAACGTTG...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGAGAACTGCATTATCGTaGTGGGCAATCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKRTALS*WAIPFS
Trigger: AGAAAATGGGATTGCCCACCACGATAATGCAGTTCT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTGAACTTCAGCACCAGTaGGCAATAAGCCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVELQHQ*AISHFV
Trigger: AACAAAGTGGCTTATTGCCCACTGGTGCTGAAGTTC...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
3UTR CAA 72 bp TGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTaGGTATCTGAACCACTTCCATATAACCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WKLLLLQYEQSL*VSEPLPYNLLW
Trigger: CCAGAGGAGGTTATATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TTAGTTTGTGTTTTCGATGATGCTGTGTGTACGGGGCACATACGTGAAGGACTATTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVCVFDDAVCTGHIREGLLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...TAGTCCTTCACGTATGTGCCCCGTACACACAGCATCATCGAAAACACAAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGGTAAATTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: TISKKGHLEPIGLSANGKLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...TTTACCATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR GCA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTATCGAGGGACTTGTCTaGATGATGGTTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVIEGLV*MMVYLQ
Trigger: TTGGAGATAAACCATCATGCAGACAAGTCCCTCGAT...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTAAATCATGTTTCCACTaGGGTCCATCTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLKSCFH*GPSFPQ
Trigger: TTGGGGGAAAGATGGACCCCAGTGGAAACATGATTT...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp GAGAAGCACCAGCAGAGATACTCATTGTGCCAAGATGTATTTACCAACAAATCTGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EKHQQRYSLCQDVFTNKSVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...AGATTTGTTGGTAAATACATCTTGGCACAATGAGTATCTCTGCTGGTGCTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp CCTCATGACCTTTCGTCCCACAAGAATTTCCAATTCCATCATGGTTCATACCAATTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: PHDLSSHKNFQFHHGSYQLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...TTGGTATGAACCATGATGGAATTGGAAATTCTTGTGGGACGAAAGGTCATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
3UTR CAA 72 bp CTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTaGTCATCCAATCTTTTACAGACCACTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSGSQKLFWTME*SSNLLQTTSCL
Trigger: AAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp ACATGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTTGGTATCTGAACCAGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: TWKLLLLQYEQSLLVSEPVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...TGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR TCA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTGTCAGGAATTCCTCTTaGGAACTATATGAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLVRNSS*ELYESL
Trigger: CAGACTTTCATATAGTTCTCAAGAGGAATTCCTGAC...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CCA 90 bp TCTCATATAAATAAATGCCCTTCTACCATATCAAAGAAGGGACATCTGGAACCCTTTGGTGGGAGAGAATaGATTTCTGCCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: SHINKCPSTISKKGHLEPFGGRE*ISAIYR
Trigger: TCTGTAAATGGCAGAAATCCATTCTCTCCCACCAAA...GGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAGGGCATTTATTTATATGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CAA 72 bp AAAATATTATCACAACCTACGTGCTTGCATTCTCCATaGATACAGATATCCAGTGAGTCTGCATTGCACTGT +
Preference number: 4 (lower is better)
Translates to: KILSQPTCLHSP*IQISSESALHC
Trigger: ACAGTGCAATGCAGACTCACTGGATATCTGTATCAATGGAGAATGCAAGCACGTAGGTTGTGATAATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
3UTR CAA 72 bp TGCTCAAGTTTAAATTCAGAGTCTACTTTGAGAATGTaGAATCCTGTTAAACCACGCTTTGTTTCCCCATGG +
Preference number: 4 (lower is better)
Translates to: CSSLNSESTLRM*NPVKPRFVSPW
Trigger: CCATGGGGAAACAAAGCGTGGTTTAACAGGATTCAACATTCTCAAAGTAGACTCTGAATTTAAACTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
3UTR CAA 72 bp TGGAAACTTCTCTTACTTCAATATGAACAGAGCCTCTaGGTATCTGAACCACTTCCATATAACCTTGCATTC +
Preference number: 4 (lower is better)
Translates to: WKLLLLQYEQSL*VSEPLPYNLAF
Trigger: GAATGCAAGGTTATATGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATATTGAAGTAAGAGAAGTTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223562.2
CDS-3UTR TCA 90 bp GTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTTTACATTAGTTGTACTATGTTaGTCTTGCAAGTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: VRITEIVLDNGVVIQSFTLVVLC*SCKYPV
Trigger: CACAGGATACTTGCAAGATCAACATAGTACAACTAA...TGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCTGCAGAGCACGGCCCTaGTGCGCATCCCACCATCAC +
Preference number: 5 (lower is better)
Translates to: WISQIWQSLLIPCPALWICRARP*CASHHH
Trigger: GTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCA...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AGGCATCCCACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 5 (lower is better)
Translates to: RHPTDGCKGLVLQSLPCLERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...AAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGTGGGATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCCCCATATTTGCATaGGCGGGATGTTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGFPIFA*AGCCSI
Trigger: TATGGAGCAACATCCCGCCAATGCAAATATGGGGAA...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCCTGGACAGTTCTCATTaGTTGTCCAAGACCACACTG +
Preference number: 5 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGLDSSH*LSKTTL
Trigger: CAGTGTGGTCTTGGACAACAAATGAGAACTGTCCAG...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CTTTCAGGCTCACACATTCCAGCCACAGAGGCTAAGCCCAGTGTTCCACAGGGCTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: LSGSHIPATEAKPSVPQGFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...GCCCTGTGGAACACTGGGCTTAGCCTCTGTGGCTGGAATGTGTGAGCCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
ENSMUST00000224742.2
CDS-3UTR CAA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTTGGTGACACAGCGGTaGCTTTTGCTGAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCLVTQR*LLLRHQ
Trigger: CTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAA...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCTTCTGCATGAAATTGTTGGTGACACAGCGGTaGCTTTTGCTGAGGCACCAG +
Preference number: 5 (lower is better)
Translates to: GLVLQSLPCLRSGFCMKLLVTQR*LLLRHQ
Trigger: CTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAA...CAATTTCATGCAGAAGCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCTGCAGAGCACGGCCCTaGTGCGCATCCCACCATCAC +
Preference number: 5 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCCRARP*CASHHH
Trigger: GTGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCA...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GCAGTAGCCTGTCCACTGTGCCAATGCACTTCCTGGAGAGAGCATAGACTGATCGCTCGACTGCAGAACTaGAACTTCAGCACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: AVACPLCQCTSWREHRLIARLQN*NFSTSG
Trigger: CCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGC...GATCAGTCTATGCTCTCTCCAGGAAGTGCATTGGCACAGTGGACAGGCTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATA +
Preference number: 5 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGSVPQG*FLYVQI
Trigger: TATCTGCACGTATAAAAACAAGCCCTGTGGAACACT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AGCCCAGCCTCCGCTGCTGATCCCACTGTTACCACGGAGGACAGAGATGGCTGCATACTGGAAACGACATaGTTCATCAGCATCATACAC +
Preference number: 5 (lower is better)
Translates to: SPASAADPTVTTEDRDGCILETT*FISIIH
Trigger: GTGTATGATGCTGATGAACAATGTCGTTTCCAGTAT...GCAGCCATCTCTGTCCTCCGTGGTAACAGTGGGATCAGCAGCGGAGGCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: EISASLAQWQVGHRLLALTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GTTGGTGACACAGCGGTTGCTTTTGCTGAGGCACCAGAGCTCTCTACACACTTCTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: VGDTAVAFAEAPELSTHFFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...GAAGTGTGTAGAGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGTCACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp ACTGACGGCTGCAAGGGCCTGGTGCTTCAGTCTCTGCCATGCCTTAGGTCTGGCATACTGGAAACGACATaGTTCATCAGCATCATACAC +
Preference number: 5 (lower is better)
Translates to: TDGCKGLVLQSLPCLRSGILETT*FISIIH
Trigger: GTGTATGATGCTGATGAACAATGTCGTTTCCAGTAT...GCCAGACCTAAGGCATGGCAGAGACTGAAGCACCAGGCCCTTGCAGCCGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAAGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGGTGGACATGACTGGTaGTTGCAGGACTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLGGHDW*LQDSFS
Trigger: GGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACC...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTT +
Preference number: 5 (lower is better)
Translates to: FPHGIISISSPCMQQPSRALLWT*CSWECF
Trigger: AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGC...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: CLDLSDLAVPPDTVSSTLFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...CAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp ATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCATGCATTGGCGGGATGTaGCTCCATACTGGAAACGAC +
Preference number: 5 (lower is better)
Translates to: MEISASLAQWQVGHRLLACIGGM*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCA...TGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCTTTACAGACCACTTCTaGTCTTTGGACACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WISQIWQSLLIPCPALWIFTDHF*SLDTSS
Trigger: GCTGGAGGTGTCCAAAGACAAGAAGTGGTCTGTAAA...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCCCACCATCACAAGTCTaGCTGCACTCCAACCAGTCT +
Preference number: 5 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTPPSQV*LHSNQS
Trigger: AGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTGG...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCATGCGAGCAGGAGGCTaGCTCTCCTCTGGACATTGT +
Preference number: 5 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCMRAGG*LSSGHC
Trigger: ACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCAT...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTGACAGTTCTCATTTGTaGTCCAAGACCACACTGAGC +
Preference number: 5 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCDSSHL*SKTTLS
Trigger: GCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTC...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGTGTCCAGCACTTTGGATCCTGGACAGTTCTCATTaGTTGTCCAAGACCACACTG +
Preference number: 5 (lower is better)
Translates to: WISQIWQSLLIPCPALWILDSSH*LSKTTL
Trigger: CAGTGTGGTCTTGGACAACAAATGAGAACTGTCCAG...GATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCTCCTAGCCATGGGTTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: SYFGRPLYQWQTLLLAMGFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...ACCCATGGCTAGGAGCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp GACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 5 (lower is better)
Translates to: DLHSCSNCCAASNQVPHCGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...ACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCACACAGCGGTTGCTTTaGCTGAGGCACCAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGTQRLL*LRHQSS
Trigger: AGAGCTCTGGTGCCTCAGCAAAAGCAACCGCTGTGT...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CAATGCACTTCCTGGAGAGAGCATAGACTGATCTCTTACCCTAGCAGTAGCAGAGCAGCTGGAATACTGTaGGTGACACAGCGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QCTSWREHRLISYPSSSRAAGIL*VTQRLL
Trigger: AAGCAACCGCTGTGTCACCAACAGTATTCCAGCTGC...TCTGCTACTGCTAGGGTAAGAGATCAGTCTATGCTCTCTCCAGGAAGTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTCTTAGCACTGCTGGGCAATGAGTCATaGAAGAACCCTTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: EISASLAQWQVGHRLLALLGNES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGACTCATTGCCCAG...CAGTGCTAAGAGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGGCTCTCCTCTGGACATaGTGCAGCTGGGAATGTTTT +
Preference number: 5 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPALLWT*CSWECF
Trigger: AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGC...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACTTGCACAGCTGCAGCAATTGCTGCGCAGCTTCAAACCAAGTCCCTCACTGTTGACAGTTCTCATTTGTaGTCCAAGACCACACTGAGC +
Preference number: 5 (lower is better)
Translates to: TCTAAAIAAQLQTKSLTVDSSHL*SKTTLS
Trigger: GCTCAGTGTGGTCTTGGACAACAAATGAGAACTGTC...AACAGTGAGGGACTTGGTTTGAAGCTGCGCAGCAATTGCTGCAGCTGTGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GAAGGTCCAACTTTCCTGATGCAGAGCACGGCCCTTGTGCGCATCCCACCATCAGAGAAAAGCTCCATTTaGGTCAACTCTTATTGGAAT +
Preference number: 5 (lower is better)
Translates to: EGPTFLMQSTALVRIPPSEKSSI*VNSYWN
Trigger: ATTCCAATAAGAGTTGACCAAAATGGAGCTTTTCTC...TGATGGTGGGATGCGCACAAGGGCCGTGCTCTGCATCAGGAAAGTTGGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AGTCACGCTTTGGAGGCTCATTATCAAGGCAAGTACCACGGCCTGAATCTAGAATTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: SHALEAHYQGKYHGLNLEFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...TTCTAGATTCAGGCCGTGGTACTTGCCTTGATAATGAGCCTCCAAAGCGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224504.2
CDS-3UTR CAA 90 bp ATTTCCCACCTCCTGAAGGTGCTGGACTGTCACAGTGTCTTAGAGACGAGGAGAGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 5 (lower is better)
Translates to: ISHLLKVLDCHSVLETRRGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...TCTCCTCGTCTCTAAGACACTGTGACAGTCCAGCACCTTCAGGAGGTGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTATTCCCCATATTTGCATaGGCGGGATGTTGCTCCATA +
Preference number: 5 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLFPIFA*AGCCSI
Trigger: TATGGAGCAACATCCCGCCAATGCAAATATGGGGAA...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTACTGGGCAATGAGTCATaGAAGAACCCTTCAATGGCA +
Preference number: 5 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLLGNES*KNPSMA
Trigger: TGCCATTGAAGGGTTCTTCAATGACTCATTGCCCAG...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TTTCCGCATGGCATCATCTCCATAAGCTCACCATGCATGCAACAGCCGAGCAGGTCAGGATCACAGAAATaGTTCTGGACAATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FPHGIISISSPCMQQPSRSGSQK*FWTMEL
Trigger: CAACTCCATTGTCCAGAACAATTTCTGTGATCCTGA...CCTGCTCGGCTGTTGCATGCATGGTGAGCTTATGGAGATGATGCCATGCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTACCACCATCACAAGTCTaGCTGCACTCCAACCAGTCT +
Preference number: 5 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVPPSQV*LHSNQS
Trigger: AGACTGGTTGGAGTGCAGCAAGACTTGTGATGGTGG...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GATGCGAGCAGGAGGCTTGCTCTCCTCTGGACATTGTGCAGCTGGGAATGTTTTTGTACTATGTTGATCTaGCAAGTATCCTGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: DASRRLALLWTLCSWECFCTMLI*QVSCVV
Trigger: CACTACACAGGATACTTGCAAGATCAACATAGTACA...AAAACATTCCCAGCTGCACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp ATATTGAAATCCTGTCAGCTGGGGCTGACCAGTGGTTACATTTTCCACAGGGTACACACTTCCCCATATTaGCATTGGCGGGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: ILKSCQLGLTSGYIFHRVHTSPY*HWRDVA
Trigger: AGCAACATCCCGCCAATGCAAATATGGGGAAGTGTG...TACCCTGTGGAAAATGTAACCACTGGTCAGCCCCAGCTGACAGGATTTCAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTTTACAGACCACTTCTaGTCTTTGGACACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSFTDHF*SLDTSS
Trigger: GCTGGAGGTGTCCAAAGACAAGAAGTGGTCTGTAAA...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCATGCGAGCAGGAGGCTaGCTCTCCTCTGGACATTGT +
Preference number: 5 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCMRAGG*LSSGHC
Trigger: ACAATGTCCAGAGGAGAGCAAGCCTCCTGCTCGCAT...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGGCTCGACTGCAGAACTaGAACTTCAGCACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKARLQN*NFSTSG
Trigger: CCCACTGGTGCTGAAGTTCAAGTTCTGCAGTCGAGC...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATA +
Preference number: 5 (lower is better)
Translates to: ASFLCCLDLSDLAVPPDTSVPQG*FLYVQI
Trigger: TATCTGCACGTATAAAAACAAGCCCTGTGGAACACT...GGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AGAGATGGCTGCAGTAGCAGTGGCATTGTAATGTGTTATGGAAGATGCTCTTCACACACTTCCCCATATTaGCATTGGCGGGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: RDGCSSSGIVMCYGRCSSHTSPY*HWRDVA
Trigger: AGCAACATCCCGCCAATGCAAATATGGGGAAGTGTG...TGAAGAGCATCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCCGAACGATGGGAACATaGAACTTGTACCTAATTCCC +
Preference number: 5 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCRTMGT*NLYLIP
Trigger: GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCG...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AAGCTGATCTGTGGCTGGTGGGGATGTAAACACGAAGGAGTCTCGGTGACTCAATTCTGGACAATGGAGTaGTCATCCAATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: KLICGWWGCKHEGVSVTQFWTME*SSNLLQ
Trigger: CTGTAAAAGATTGGATGACAACTCCATTGTCCAGAA...TTGAGTCACCGAGACTCCTTCGTGTTTACATCCCCACCAGCCACAGATCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ATGGCAAGTTGGCCACAGACTCTTAGCACTGAGTTTATAGACTTGCACAGCTGCAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 5 (lower is better)
Translates to: MASWPQTLSTEFIDLHSCSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...GCAGCTGTGCAAGTCTATAAACTCAGTGCTAAGAGTCTGTGGCCAACTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CAATGGAGTTGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCAGTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: QWSCHPIFYRPLLVFGHQFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...CTGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp CGTGCAGATATCATATCTAGTAATAAGAACTGCATTATCGTGGTGGGCAATCCCTTCAGCCACCAAGGTTaGCCACTTCCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: RADIISSNKNCIIVVGNPFSHQG*PLPVRS
Trigger: AGATCTCACAGGAAGTGGCAAACCTTGGTGGCTGAA...GGGATTGCCCACCACGATAATGCAGTTCTTATTACTAGATATGATATCTGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224303.2
ENSMUST00000224742.2
CDS-3UTR CAA 90 bp CTTCTACCATATCAAAGAAGGGACATCTGGAACCCATCGGACTGTCAGCAAATGGGTGTTTCCATCACTTaGGTGGGAGAGAATGGATTT +
Preference number: 5 (lower is better)
Translates to: LLPYQRRDIWNPSDCQQMGVSIT*VGENGF
Trigger: AAATCCATTCTCTCCCACCAAAGTGATGGAAACACC...CATTTGCTGACAGTCCGATGGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCTATGAACAGAGCCTCTaGGTATCTGAACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: KRSTVSKFPVLFGSLRSGYEQSL*VSEPLP
Trigger: TGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATA...GCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTAGTGTTGCAGGCTCTTaGATTTTCAGGTGGCTTACT +
Preference number: 5 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTSVAGS*IFRWLT
Trigger: AGTAAGCCACCTGAAAATCAAAGAGCCTGCAACACT...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CTGGAACCCATCGGACTGTCAGCAAATGGTAAAGGGCCTGCCTGGTTATTACTAAGAACAATCCGATGCTaGAATCCTGAACCACATTTA +
Preference number: 5 (lower is better)
Translates to: LEPIGLSANGKGPAWLLLRTIRC*NPEPHL
Trigger: TAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT...TAGTAATAACCAGGCAGGCCCTTTACCATTTGCTGACAGTCCGATGGGTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCGAAAGGTCACTGCTCTaGCACAGAACAATCCGATGC +
Preference number: 5 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCERSLL*HRTIRC
Trigger: GCATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTC...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCTGATACCGGAGAAAAGCTCCATTTaGGTCAACTCTTATTGGAAT +
Preference number: 5 (lower is better)
Translates to: QVSCVVWISQIWQSLLIPEKSSI*VNSYWN
Trigger: ATTCCAATAAGAGTTGACCAAAATGGAGCTTTTCTC...CGGTATCAGGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp ATCAGCATCATACACCTGACCTGGGGCCACAGCTGGATAAAGAAAGTCACGCTTGAGAAAAGCTCCATTTaGGTCAACTCTTATTGGAAT +
Preference number: 5 (lower is better)
Translates to: ISIIHLTWGHSWIKKVTLEKSSI*VNSYWN
Trigger: ATTCCAATAAGAGTTGACCAAAATGGAGCTTTTCTC...AAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGTGCATTGGCGGGATGTaGCTCCATACTGGAAACGAC +
Preference number: 5 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLCIGGM*LHTGND
Trigger: GTCGTTTCCAGTATGGAGCAACATCCCGCCAATGCA...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GTCTATTGGGAAATCATACCTGCCTTTAGGGGTTCAATCATTTGGGTATATTTGGGTGGACATGACTGGTaGTTGCAGGACTCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VYWEIIPAFRGSIIWVYLGGHDW*LQDSFS
Trigger: GGAGAAAGAGTCCTGCAACAACCAGTCATGTCCACC...CAAATATACCCAAATGATTGAACCCCTAAAGGCAGGTATGATTTCCCAATAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTCTCAGATCTGGCAGTCCCTCCGAGAAAAGCTCCATTTaGGTCAACTCTTATTGGAAT +
Preference number: 5 (lower is better)
Translates to: TVSKFPVLFGSLRSGSPSEKSSI*VNSYWN
Trigger: ATTCCAATAAGAGTTGACCAAAATGGAGCTTTTCTC...GGAGGGACTGCCAGATCTGAGAGATCCAAACAACACAGGAAACTTGCTTACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AAACAGCCCACCTTCAAGATAGTCTTGGAGAAGCACCAGCAGAGATACTCATTGTGTACTATGTTGATCTaGCAAGTATCCTGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: KQPTFKIVLEKHQQRYSLCTMLI*QVSCVV
Trigger: CACTACACAGGATACTTGCAAGATCAACATAGTACA...CAATGAGTATCTCTGCTGGTGCTTCTCCAAGACTATCTTGAAGGTGGGCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp GAGGTAAACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 5 (lower is better)
Translates to: EVNRLLDLLERTQTLHSKKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...CTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTTTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp GGTATATTTGACATTCCTATTTTGGTAGGCCTTTATACCAGTGGCAGACACTGCCGAACGATGGGAACATaGAACTTGTACCTAATTCCC +
Preference number: 5 (lower is better)
Translates to: GIFDIPILVGLYTSGRHCRTMGT*NLYLIP
Trigger: GGGAATTAGGTACAAGTTCAATGTTCCCATCGTTCG...GCAGTGTCTGCCACTGGTATAAAGGCCTACCAAAATAGGAATGTCAAATATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp CTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGATCTGTACTATGTTGATCTaGCAAGTATCCTGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LERTQTLHSKQVSCVVWICTMLI*QVSCVV
Trigger: CACTACACAGGATACTTGCAAGATCAACATAGTACA...GATCCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224303.2
ENSMUST00000224742.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp TTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCCTGTGTTGTTTGGAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATA +
Preference number: 5 (lower is better)
Translates to: LLERTQTLHSKQVSCVVWSVPQG*FLYVQI
Trigger: TATCTGCACGTATAAAAACAAGCCCTGTGGAACACT...CCAAACAACACAGGAAACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTATGAACAGAGCCTCTaGGTATCTGAACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVYEQSL*VSEPLP
Trigger: TGGAAGTGGTTCAGATACCAAGAGGCTCTGTTCATA...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AGTTTTAATGGAAATCTCAGCCTCCCTTGCACAATGGCAAGTTGGCCACAGACTATGGGAACATTGAACTaGTACCTAATTCCCAAATTC +
Preference number: 5 (lower is better)
Translates to: SFNGNLSLPCTMASWPQTMGTLN*YLIPKF
Trigger: GAATTTGGGAATTAGGTACAAGTTCAATGTTCCCAT...AGTCTGTGGCCAACTTGCCATTGTGCAAGGGAGGCTGAGATTTCCATTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACTAAGGAGGTGTGCTTGACACAAAGCACATTCACCAACAACCTACTACACGCTATGGGAACATTGAACTaGTACCTAATTCCCAAATTC +
Preference number: 5 (lower is better)
Translates to: TKEVCLTQSTFTNNLLHAMGTLN*YLIPKF
Trigger: GAATTTGGGAATTAGGTACAAGTTCAATGTTCCCAT...AGCGTGTAGTAGGTTGTTGGTGAATGTGCTTTGTGTCAAGCACACCTCCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AGAGATGGCTGCAGTAGCAGTGGCATTGTAATGTGTTATGGAAGATGCTCTTCATTCTGGACAATGGAGTaGTCATCCAATCTTTTACAG +
Preference number: 5 (lower is better)
Translates to: RDGCSSSGIVMCYGRCSSFWTME*SSNLLQ
Trigger: CTGTAAAAGATTGGATGACAACTCCATTGTCCAGAA...TGAAGAGCATCTTCCATAACACATTACAATGCCACTGCTACTGCAGCCATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp ACACCATTATCCCAGAGACCCAGACAACAGGAACTATGTAGCATCCCAGTATATGAGAAAAGCTCCATTTaGGTCAACTCTTATTGGAAT +
Preference number: 5 (lower is better)
Translates to: TPLSQRPRQQELCSIPVYEKSSI*VNSYWN
Trigger: ATTCCAATAAGAGTTGACCAAAATGGAGCTTTTCTC...ATATACTGGGATGCTACATAGTTCCTGTTGTCTGGGTCTCTGGGATAATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp TTTGATTGCTGGAGAAGGGAGTTTGAATGGGATTGTGGGAAACACACACTCATATGTACTATGTTGATCTaGCAAGTATCCTGTGTAGTG +
Preference number: 5 (lower is better)
Translates to: FDCWRREFEWDCGKHTLICTMLI*QVSCVV
Trigger: CACTACACAGGATACTTGCAAGATCAACATAGTACA...TATGAGTGTGTGTTTCCCACAATCCCATTCAAACTCCCTTCTCCAGCAATCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223562.2
ENSMUST00000224303.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp TCTCATATAAATAAATGCCCTTCTACCATATCAAAGAAGGGACATCTGGAACCCAAAGAAAGTCACGCTTaGGAGGCTCATTATCAAGGC +
Preference number: 5 (lower is better)
Translates to: SHINKCPSTISKKGHLEPKESHA*EAHYQG
Trigger: GCCTTGATAATGAGCCTCCAAAGCGTGACTTTCTTT...GGGTTCCAGATGTCCCTTCTTTGATATGGTAGAAGGGCATTTATTTATATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTTCAGGATCACAGAAATaGTTCTGGACAATGGAGTTG +
Preference number: 5 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVSGSQK*FWTMEL
Trigger: CAACTCCATTGTCCAGAACAATTTCTGTGATCCTGA...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS-3UTR CAA 90 bp TTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTTGTCATCCAATCTTAGTGTTCCACAGGGCTaGTTTTTATACGTGCAGATA +
Preference number: 5 (lower is better)
Translates to: LLSGSQKLFWTMELSSNLSVPQG*FLYVQI
Trigger: TATCTGCACGTATAAAAACAAGCCCTGTGGAACACT...AAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000223562.2
ENSMUST00000224784.2
CDS-3UTR CAA 90 bp AACAGGCTGTTAGATTTACTCGAAAGAACACAAACGCTCCACAGTAAGCAAGTTAGAACAATCCGATGCTaGAATCCTGAACCACATTTA +
Preference number: 5 (lower is better)
Translates to: NRLLDLLERTQTLHSKQVRTIRC*NPEPHL
Trigger: TAAATGTGGTTCAGGATTCAAGCATCGGATTGTTCT...AACTTGCTTACTGTGGAGCGTTTGTGTTCTTTCGAGTAAATCTAACAGCCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS CAA 72 bp AATGGAGTTGTCATCCAATCTTTTACAGACCACTTCTaGTCTTTGGACACCTCCAGCACAAGTAGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: NGVVIQSFTDHF*SLDTSSTSSRA
Trigger: TGCTCTGCTACTTGTGCTGGAGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2
CDS CAA 90 bp GGTGGCTTACTGTCAGGATCACAGAAATTGTTCTGGACAATGGAGTaGTCATCCAATCTTTTACAGACCACTTCTTGTCTTTGGACACCT +
Preference number: 6 (lower is better)
Translates to: GGLLSGSQKLFWTME*SSNLLQTTSCLWTP
Trigger: AGGTGTCCAAAGACAAGAAGTGGTCTGTAAAAGATTGGATGACAACTCCATTGTCCAGAACAATTTCTGTGATCCTGACAGTAAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000065766.7
ENSMUST00000224208.2