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Pregenerated sensors for ADAMTS5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022894

Ensembl transcript IDs: ENSMUST00000023611.7

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTCACTGGGTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTaGGCACCTGGGCTAAGGCAAGAGGGTTTTATATATCTTCATCAA +
Preference number: 1 (lower is better)
Translates to: RLTGFTCPKELGLGI*APGLRQEGFIYLHQ
Trigger: TTGATGAAGATATATAAAACCCTCTTGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAACCCAGTGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 90 bp TGGGTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTaGGCTAAGGCAAGAGGGTTTTATATATCTTCATCAAGGGATGAT +
Preference number: 1 (lower is better)
Translates to: WVHLSQRTGSGDLGT*AKARGFYISSSRDD
Trigger: ATCATCCCTTGATGAAGATATATAAAACCCTCTTGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp GATTCTGCCCATAATTCGACTCGTGGTGACAATGACATGAAGGCATaGCTTTCTGTGCTTTGGGTAGGCCTTGTCTTCACCACAGCTGTA +
Preference number: 1 (lower is better)
Translates to: DSAHNSTRGDNDMKA*LSVLWVGLVFTTAV
Trigger: TACAGCTGTGGTGAAGACAAGGCCTACCCAAAGCACAGAAAGTCATGCCTTCATGTCATTGTCACCACGAGTCGAATTATGGGCAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp AGGAAGTTATTAATGGAGGAACATCGGAGCCAGGGCTTGACCCAATaGCTTATACAGTGGGGCCAAGAGTGCTTGACTTTATTTCTAGAC +
Preference number: 1 (lower is better)
Translates to: RKLLMEEHRSQGLTQ*LIQWGQECLTLFLD
Trigger: GTCTAGAAATAAAGTCAAGCACTCTTGGCCCCACTGTATAAGTCATTGGGTCAAGCCCTGGCTCCGATGTTCCTCCATTAATAACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp ATTCATCATTGTGTGTCTCCTTTGTGTAGGCCCAGGGATGTTCCATaGCCCTCACGTTTTCTTTATTCCAAGGTCACCATCATTACACCA +
Preference number: 1 (lower is better)
Translates to: IHHCVSPLCRPRDVP*PSRFLYSKVTIITP
Trigger: TGGTGTAATGATGGTGACCTTGGAATAAAGAAAACGTGAGGGTCATGGAACATCCCTGGGCCTACACAAAGGAGACACACAATGATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 90 bp CAGACAACTCTTAAGTTCATAATCTTCCTCCTTCAGCCTCCTGTGTaGTATGCCTGTTTCAAACCCTGTTCTCCATTGTGTCTTAGCTTC +
Preference number: 1 (lower is better)
Translates to: QTTLKFIIFLLQPPV*YACFKPCSPLCLSF
Trigger: GAAGCTAAGACACAATGGAGAACAGGGTTTGAAACAGGCATAGCACACAGGAGGCTGAAGGAGGAAGATTATGAACTTAAGAGTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 90 bp GATGTGACTGAAACTGATTCTATTTCTTCCACCAAACTAGGGGCCTaGTATGGCTCCCAGACAACTCTTAAGTTCATAATCTTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: DVTETDSISSTKLGA*YGSQTTLKFIIFLL
Trigger: AAGGAGGAAGATTATGAACTTAAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATCAGTTTCAGTCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp TTAATATCGGTTTCTCCTCCCACACTCAATTTCTCTTTCCCTCTGTaGCACTTCAGATTTCTGACTCTCAGTTTGCTGTGTTTCTTTCCT +
Preference number: 1 (lower is better)
Translates to: LISVSPPTLNFSFPL*HFRFLTLSLLCFFP
Trigger: AGGAAAGAAACACAGCAAACTGAGAGTCAGAAATCTGAAGTGTCACAGAGGGAAAGAGAAATTGAGTGTGGGAGGAGAAACCGATATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp AGACCGTCAAACTCTAGAGTACACAGAACTGAATATGTGTTTAAATaGCCAGACACACGCAGATCCTTTCCCTTTTTAGAACTTCACAGA +
Preference number: 1 (lower is better)
Translates to: RPSNSRVHRTEYVFK*PDTRRSFPFLELHR
Trigger: TCTGTGAAGTTCTAAAAAGGGAAAGGATCTGCGTGTGTCTGGTCATTTAAACACATATTCAGTTCTGTGTACTCTAGAGTTTGACGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp AAGATACACAACCGGGAAGATGGCAAACACAGCACAGAATCTAACTaGATGAATTGGAATTTAATATCGGTTTCTCCTCCCACACTCAAT +
Preference number: 1 (lower is better)
Translates to: KIHNREDGKHSTESN*MNWNLISVSPPTLN
Trigger: ATTGAGTGTGGGAGGAGAAACCGATATTAAATTCCAATTCATTCAGTTAGATTCTGTGCTGTGTTTGCCATCTTCCCGGTTGTGTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 90 bp AGAGTAGAATTAAGCATTGTATTCATCATATTTCTAACAATGAGCTaGAGTCATAGTGCACACCCTGGATTTCTGAACCTGCCTATGTTC +
Preference number: 1 (lower is better)
Translates to: RVELSIVFIIFLTMS*SHSAHPGFLNLPMF
Trigger: GAACATAGGCAGGTTCAGAAATCCAGGGTGTGCACTATGACTGCAGCTCATTGTTAGAAATATGATGAATACAATGCTTAATTCTACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 90 bp TCTCTAGAATCTCTACAGACAGCAGAGGCTCAGACACTGTTTTTGTaGGAAGCTGTTTCTAAAGCTGTAAGAGTTTGTATTTATCATTCT +
Preference number: 1 (lower is better)
Translates to: SLESLQTAEAQTLFL*EAVSKAVRVCIYHS
Trigger: AGAATGATAAATACAAACTCTTACAGCTTTAGAAACAGCTTCCCACAAAAACAGTGTCTGAGCCTCTGCTGTCTGTAGAGATTCTAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 90 bp GGTTTACTATTTTACTCATTAACACTAATAGAAGCTCAGCGTTGGTaGCACTGCTTATGTCAAATGGGTTGTGTTTCTGCCATTGATTTA +
Preference number: 1 (lower is better)
Translates to: GLLFYSLTLIEAQRW*HCLCQMGCVSAIDL
Trigger: TAAATCAATGGCAGAAACACAACCCATTTGACATAAGCAGTGGCACCAACGCTGAGCTTCTATTAGTGTTAATGAGTAAAATAGTAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp AACATAGTGATCAATGTTCCTTTAAAATTTAAGAGAGTGGCAGACTaGAAATACATGCGGAATATACACACATACACCTGTTCCACACAG +
Preference number: 1 (lower is better)
Translates to: NIVINVPLKFKRVAD*KYMRNIHTYTCSTQ
Trigger: CTGTGTGGAACAGGTGTATGTGTGTATATTCCGCATGTATTTTCAGTCTGCCACTCTCTTAAATTTTAAAGGAACATTGATCACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp CTATTAAAATATAAGCAGTGTTTGCCACTTCTTGACTGTAGCAAATaGACCAGCAATTTTCATGCTGCACGCAAATGCACATTTCAATAC +
Preference number: 1 (lower is better)
Translates to: LLKYKQCLPLLDCSK*TSNFHAARKCTFQY
Trigger: GTATTGAAATGTGCATTTGCGTGCAGCATGAAAATTGCTGGTTCATTTGCTACAGTCAAGAAGTGGCAAACACTGCTTATATTTTAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 90 bp GCGTTGGTGCCACTGCTTATGTCAAATGGGTTGTGTTTCTGCCATTaGTTTAGCTACTTGCAATATTTATTCTCAAAACTATGTATGTTT +
Preference number: 1 (lower is better)
Translates to: ALVPLLMSNGLCFCH*FSYLQYLFSKLCMF
Trigger: AAACATACATAGTTTTGAGAATAAATATTGCAAGTAGCTAAATCAATGGCAGAAACACAACCCATTTGACATAAGCAGTGGCACCAACGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAATTTTAAACCCTGGCTaGGCAGAGGTGAGCCATTAC +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAILNPG*AEVSHY
Trigger: GTAATGGCTCACCTCTGCTCAGCCAGGGTTTAAAAT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTTGCGGAAGCTGGATGTaGCAGACAGCTTGCGGCTCT +
Preference number: 2 (lower is better)
Translates to: DSISSTKLGACYGSQTTLCGSWM*QTACGS
Trigger: AGAGCCGCAAGCTGTCTGTCACATCCAGCTTCCGCA...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGACACTTCAGATTTCTaGCTCTCAGTTTGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKADTSDF*LSVCCV
Trigger: AACACAGCAAACTGAGAGTCAGAAATCTGAAGTGTC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAATTTTGCATCTGCTTTaGCCTATTTTGCTCTTGTGG +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAILHLL*PILLLW
Trigger: CCACAAGAGCAAAATAGGTCAAAGCAGATGCAAAAT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGGTTTGGGAGGGCATTaGTCTGTTTCACAAAATAAT +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAGLGGH*SVSQNN
Trigger: ATTATTTTGTGAAACAGACCAATGCCCTCCCAAACC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCACCACTGAAATCAATGTaGTATGGAGTCATCAATTAC +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAPLKSM*YGVINY
Trigger: GTAATTGATGACTCCATATCACATTGATTTCAGTGG...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCATGTTTTGTGGTGATATaGTTCAATAAGCCATGCCTA +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKACFVVI*FNKPCL
Trigger: TAGGCATGGCTTATTGAATCATATCACCACAAAACA...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCACTCTGGGCTCTTTTaGACTGACACTCACTCTGGA +
Preference number: 2 (lower is better)
Translates to: DSISSTKLGACYGSQTTLHSGLF*TDTHSG
Trigger: TCCAGAGTGAGTGTCAGTGCAAAAGAGCCCAGAGTG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACATAAGCTGTGTGTCATaGCTGAACATGATCACGATG +
Preference number: 2 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHISCVS*LNMITM
Trigger: CATCGTGATCATGTTCAGCCATGACACACAGCTTAT...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCACACAGTAGGCACATTTaGTATGGTCACTATAGAATT +
Preference number: 2 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAHSRHI*YGHYRI
Trigger: AATTCTATAGTGACCATACCAAATGTGCCTACTGTG...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTTGGGCTCTTTTGCACTaGCACTCACTCTGGAATAAT +
Preference number: 2 (lower is better)
Translates to: DSISSTKLGACYGSQTTLWALLH*HSLWNN
Trigger: ATTATTCCAGAGTGAGTGTCAGTGCAAAAGAGCCCA...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGCTTGGCTTGGCTGCCTaGAAAATATACAGACCGTCA +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKLGLAA*KIYRPS
Trigger: TGACGGTCTGTATATTTTTCAGGCAGCCAAGCCAAG...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGTCTGCGTGTTCTCTATaGTCCCTACACACTGTGAGA +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKSACSL*SLHTVR
Trigger: TCTCACAGTGTGTAGGGATCATAGAGAACACGCAGA...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACTACAATAACTTGGCTTaGCTGCCTGAAAAATATACA +
Preference number: 2 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHYNNLA*LPEKYT
Trigger: TGTATATTTTTCAGGCAGCCAAGCCAAGTTATTGTA...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTGTTTCTACACCCAAATaGTACAATAACTTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: DSISSTKLGACYGSQTTLVSTPK*YNNLAW
Trigger: CCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAAC...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGACCAAGTTTATAAAGTaGCATACTAAGGGCGGATGC +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKTKFIK*HTKGGC
Trigger: GCATCCGCCCTTAGTATGTCACTTTATAAACTTGGT...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGCTGGAAAATAGTAGTTaGAATAGCTGCAGACCTACT +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKLENSS*NSCRPT
Trigger: AGTAGGTCTGCAGCTATTTCAACTACTATTTTCCAG...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCTCTATAAGAGGTAGGTaGCAAGACTTCTCTGCCATC +
Preference number: 2 (lower is better)
Translates to: RMHLQTVKISCVSWLNMISIRGR*QDFSAI
Trigger: GATGGCAGAGAAGTCTTGTCACCTACCTCTTATAGA...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR GCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGTTCACAGAAGGTGCTTaGTGTCAAAATGGTTTCTTT +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKFTEGA*CQNGFF
Trigger: AAAGAAACCATTTTGACAGCAAGCACCTTCTGTGAA...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR GCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGGAACTTCACAGAAGGTaGTTGCTGTCAAAATGGTTT +
Preference number: 2 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLELHRR*LLSKWF
Trigger: AAACCATTTTGACAGCAAGCACCTTCTGTGAAGTTC...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR GCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGCAGACTGAAAATACATaGGGAATATACACACATACA +
Preference number: 2 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKQTENT*GIYTHT
Trigger: TGTATGTGTGTATATTCCGCATGTATTTTCAGTCTG...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR TCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCAATGACATGAAGGCATaGCTTTCTGTGCTTTGGGTA +
Preference number: 2 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFNDMKA*LSVLWV
Trigger: TACCCAAAGCACAGAAAGTCATGCCTTCATGTCATT...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCAATGATACAATAACTTaGCTTGGCTGCCTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFNDTIT*LGCLKN
Trigger: ATTTTTCAGGCAGCCAAGCCAAGTTATTGTATCATT...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CAA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCACCAGGAGTTTTCTGCTaGTGGGTGGGGTTGATGGAA +
Preference number: 3 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAPGVFC*WVGLME
Trigger: TTCCATCAACCCCACCCACAAGCAGAAAACTCCTGG...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 72 bp GGTCAAAAGGTGAGCCTTTGGGAAGGCAGACTTGGGTaGGTTGCTAGAACTGAGAAGGCCAAGGGTGGCAAC +
Preference number: 3 (lower is better)
Translates to: GQKVSLWEGRLG*VARTEKAKGGN
Trigger: GTTGCCACCCTTGGCCTTCTCAGTTCTAGCAACCCACCCAAGTCTGCCTTCCCAAAGGCTCACCTTTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp CTGCGGAAGCTGGATGTGACAGACAGCTTGCGGCTCTaGGTGTTCTCTATGATCCCTACACACTGTGAGATA +
Preference number: 3 (lower is better)
Translates to: LRKLDVTDSLRL*VFSMIPTHCEI
Trigger: TATCTCACAGTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAGCTTCCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp AGGCCAAGGGTGGCAACTTGTAAGCCAGGAGTTTTCTaGTTGTGGGTGGGGTTGATGGAAGAAGGAAAGACA +
Preference number: 3 (lower is better)
Translates to: RPRVATCKPGVF*LWVGLMEEGKT
Trigger: TGTCTTTCCTTCTTCCATCAACCCCACCCACAAGCAGAAAACTCCTGGCTTACAAGTTGCCACCCTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 72 bp GGGTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTaGGCACCTGGGCTAAGGCAAGAGGGTTTTATATAT +
Preference number: 3 (lower is better)
Translates to: GFTCPKELGLGI*APGLRQEGFIY
Trigger: ATATATAAAACCCTCTTGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TGTGTGTCTCCTTTGTGTAGGCCCAGGGATGTTCCATaGCCCTCACGTTTTCTTTATTCCAAGGTCACCATC +
Preference number: 3 (lower is better)
Translates to: CVSPLCRPRDVP*PSRFLYSKVTI
Trigger: GATGGTGACCTTGGAATAAAGAAAACGTGAGGGTCATGGAACATCCCTGGGCCTACACAAAGGAGACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp CAAACAAGCAACCACAAACACATTTTAAACCCTGGCTaGGCAGAGGTGAGCCATTACTGCGGAAGCTGGATG +
Preference number: 3 (lower is better)
Translates to: QTSNHKHILNPG*AEVSHYCGSWM
Trigger: CATCCAGCTTCCGCAGTAATGGCTCACCTCTGCTCAGCCAGGGTTTAAAATGTGTTTGTGGTTGCTTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp ATTTCTAGACCTGGACCGCACAGTCTCACTCACAAATaGGCTGTTGTTACCAGAGTTGTTCCTGCTTGTCCC +
Preference number: 3 (lower is better)
Translates to: ISRPGPHSLTHK*AVVTRVVPACP
Trigger: GGGACAAGCAGGAACAACTCTGGTAACAACAGCTCATTTGTGAGTGAGACTGTGCGGTCCAGGTCTAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TTAATGGAGGAACATCGGAGCCAGGGCTTGACCCAATaGCTTATACAGTGGGGCCAAGAGTGCTTGACTTTA +
Preference number: 3 (lower is better)
Translates to: LMEEHRSQGLTQ*LIQWGQECLTL
Trigger: TAAAGTCAAGCACTCTTGGCCCCACTGTATAAGTCATTGGGTCAAGCCCTGGCTCCGATGTTCCTCCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CAA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGAACCAGAGCACTGCCTaGTTCTGTTTCCCCACCTTT +
Preference number: 3 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKNQSTA*FCFPTF
Trigger: AAAGGTGGGGAAACAGAACAAGGCAGTGCTCTGGTT...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp CATAATTCGACTCGTGGTGACAATGACATGAAGGCATaGCTTTCTGTGCTTTGGGTAGGCCTTGTCTTCACC +
Preference number: 3 (lower is better)
Translates to: HNSTRGDNDMKA*LSVLWVGLVFT
Trigger: GGTGAAGACAAGGCCTACCCAAAGCACAGAAAGTCATGCCTTCATGTCATTGTCACCACGAGTCGAATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp CACTCACAAATGAGCTGTTGTTACCAGAGTTGTTCCTaGTTGTCCCATGTCCTACCACTCTGGTCTGATAGT +
Preference number: 3 (lower is better)
Translates to: HSQMSCCYQSCS*LSHVLPLWSDS
Trigger: ACTATCAGACCAGAGTGGTAGGACATGGGACAAGCAGGAACAACTCTGGTAACAACAGCTCATTTGTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CAA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCTTCACAGAAGGTGCTaGCTGTCAAAATGGTTTCTT +
Preference number: 3 (lower is better)
Translates to: DSISSTKLGACYGSQTTLLHRRC*LSKWFL
Trigger: AAGAAACCATTTTGACAGCAAGCACCTTCTGTGAAG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR-3UTR CAA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCAGTAGAGTAAACCTTTaGGTCGCAGAGAGCAGATTC +
Preference number: 3 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSSRVNL*VAESRF
Trigger: GAATCTGCTCTCTGCGACCAAAAGGTTTACTCTACT...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TGCGTGTTCTCTATGATCCCTACACACTGTGAGATATaGACCAGGAGCCATAGAAAAGGAAGCAGTTGTGAA +
Preference number: 3 (lower is better)
Translates to: CVFSMIPTHCEI*TRSHRKGSSCE
Trigger: TTCACAACTGCTTCCTTTTCTATGGCTCCTGGTTCATATCTCACAGTGTGTAGGGATCATAGAGAACACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TGCATTTGTACGGTCCCATGTTTCAGTGTAAATAGATaGGTGGTATTAGCACAGTATGGCTGTTTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: CICTVPCFSVNR*VVLAQYGCFAG
Trigger: CCCTGCAAAACAGCCATACTGTGCTAATACCACTCATCTATTTACACTGAAACATGGGACCGTACAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp GAAACTGATTCTATTTCTTCCACCAAACTAGGGGCCTaGTATGGCTCCCAGACAACTCTTAAGTTCATAATC +
Preference number: 3 (lower is better)
Translates to: ETDSISSTKLGA*YGSQTTLKFII
Trigger: GATTATGAACTTAAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATCAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TCACTTACATACTCACTGGTAGAGACAAACGCCTTCTaGGAGCAGAAATTCTCTAATACAGCAGACATATGC +
Preference number: 3 (lower is better)
Translates to: SLTYSLVETNAF*EQKFSNTADIC
Trigger: GCATATGTCTGCTGTATTAGAGAATTTCTGCTCTCAGAAGGCGTTTGTCTCTACCAGTGAGTATGTAAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp AACCGGGAAGATGGCAAACACAGCACAGAATCTAACTaGATGAATTGGAATTTAATATCGGTTTCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: NREDGKHSTESN*MNWNLISVSPP
Trigger: GGGAGGAGAAACCGATATTAAATTCCAATTCATTCAGTTAGATTCTGTGCTGTGTTTGCCATCTTCCCGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp TATAAGCAGTGTTTGCCACTTCTTGACTGTAGCAAATaGACCAGCAATTTTCATGCTGCACGCAAATGCACA +
Preference number: 3 (lower is better)
Translates to: YKQCLPLLDCSK*TSNFHAARKCT
Trigger: TGTGCATTTGCGTGCAGCATGAAAATTGCTGGTTCATTTGCTACAGTCAAGAAGTGGCAAACACTGCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp TCATTAACACTAATAGAAGCTCAGCGTTGGTGCCACTaGTTATGTCAAATGGGTTGTGTTTCTGCCATTGAT +
Preference number: 3 (lower is better)
Translates to: SLTLIEAQRWCH*LCQMGCVSAID
Trigger: ATCAATGGCAGAAACACAACCCATTTGACATAAGCAGTGGCACCAACGCTGAGCTTCTATTAGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 72 bp CAGAGTTGTTCCTGCTTGTCCCATGTCCTACCACTCTaGTCTGATAGTAGTAGTAAAAAGTCTTACTTTGTT +
Preference number: 3 (lower is better)
Translates to: QSCSCLSHVLPL*SDSSSKKSYFV
Trigger: AACAAAGTAAGACTTTTTACTACTACTATCAGACCAGAGTGGTAGGACATGGGACAAGCAGGAACAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp TTAAGCATTGTATTCATCATATTTCTAACAATGAGCTaGAGTCATAGTGCACACCCTGGATTTCTGAACCTG +
Preference number: 3 (lower is better)
Translates to: LSIVFIIFLTMS*SHSAHPGFLNL
Trigger: CAGGTTCAGAAATCCAGGGTGTGCACTATGACTGCAGCTCATTGTTAGAAATATGATGAATACAATGCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp AATTTTCATGCTGCACGCAAATGCACATTTCAATACTaGTATGTAAAGACCAGACATCTCTCAGTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: NFHAARKCTFQY*YVKTRHLSVRS
Trigger: ACTTCTGACTGAGAGATGTCTGGTCTTTACATAGCAGTATTGAAATGTGCATTTGCGTGCAGCATGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp AACTCTAGAGTACACAGAACTGAATATGTGTTTAAATaGCCAGACACACGCAGATCCTTTCCCTTTTTAGAA +
Preference number: 3 (lower is better)
Translates to: NSRVHRTEYVFK*PDTRRSFPFLE
Trigger: TTCTAAAAAGGGAAAGGATCTGCGTGTGTCTGGTCATTTAAACACATATTCAGTTCTGTGTACTCTAGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CCA 72 bp AAAACACAGTTTCTACACCCAAATGATACAATAACTTaGCTTGGCTGCCTGAAAAATATACAGACCGTCAAA +
Preference number: 3 (lower is better)
Translates to: KTQFLHPNDTIT*LGCLKNIQTVK
Trigger: TTTGACGGTCTGTATATTTTTCAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR TCA 72 bp GATAACGGTTTTTCACTAGATAAGGCAAAGAAAAATTaGGTTAAACAACTGTGTATTGTGAGCACAGGTGTC +
Preference number: 3 (lower is better)
Translates to: DNGFSLDKAKKN*VKQLCIVSTGV
Trigger: GACACCTGTGCTCACAATACACAGTTGTTTAACTCAATTTTTCTTTGCCTTATCTAGTGAAAAACCGTTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR GCA 72 bp TCTGATAGTAGTAGTAAAAAGTCTTACTTTGTTATGTaGACTTACACCCATAGACAAGGTTATGACTGGTAT +
Preference number: 3 (lower is better)
Translates to: SDSSSKKSYFVM*TYTHRQGYDWY
Trigger: ATACCAGTCATAACCTTGTCTATGGGTGTAAGTGCACATAACAAAGTAAGACTTTTTACTACTACTATCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCACAGGAGTCTCGCAACTaGCGCGTGGCGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAQESRN*RVAAGP
Trigger: AGGCCCTGCCGCCACGCGCCAGTTGCGAGACTCCTG...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACCTCGCAACTGGCGCGTaGCGGCAGGGCCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHLATGA*RQGLEA
Trigger: AGCTTCGAGGCCCTGCCGCCACGCGCCAGTTGCGAG...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAAGATGGCGAGAAAGCTaGGTGGTCCAGCAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKARWRES*VVQQLR
Trigger: CCGCAGCTGCTGGACCACTCAGCTTTCTCGCCATCT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCGGCTCGGCGGCCGCTaGTGCAGCCTGAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLRLGGR*CSLRLP
Trigger: AGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCATGCACGGTCCTAGTGTaGCAGCCTGTGTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKACTVLV*QPVSQV
Trigger: GACCTGTGACACAGGCTGGCACACTAGGACCGTGCA...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACACCGAGGGGCTCTCTTaGGGCCCAGATGGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHTEGLS*GPDGDA
Trigger: TGCATCCCCATCTGGGCCCCAAGAGAGCCCCTCGGT...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGACTGTACAGCCTGTTaGCGATGGAGGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKADCTAC*RWRPGS
Trigger: TGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCCTTCCCACAGGGAGTaGCCTCCACAGCCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLPSHRE*PPQPAA
Trigger: AGCTGCCGGCTGTGGAGGGCACTCCCTGTGGGAAGG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCATGCAGGAACGGTATATaGCCCTCTTCCCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKACRNGI*PSSLCS
Trigger: ACTGCACAGGGAAGAGGGCCATATACCGTTCCTGCA...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGCCGGTGGCCAGAGGATaGGCTCAGCCCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKPVARG*AQPSSC
Trigger: GCAGGAGGAGGGCTGAGCGCATCCTCTGGCCACCGG...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAATCATCTTCAATCACTaGACAGCTGCGCTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAIIFNH*TAALRR
Trigger: TCTCCGGAGCGCAGCTGTGCAGTGATTGAAGATGAT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACGGACCTGTCACCCACTaGAGCTGTGTAGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHGPVTH*SCVECG
Trigger: ACCACACTCTACACAGCTGCAGTGGGTGACAGGTCC...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp GAGCCATTACTGCGGAAGCTGGATGTGACAGACAGCTaGCGGCTCTGCGTGTTCTCTATGATCCCTACACAC +
Preference number: 4 (lower is better)
Translates to: EPLLRKLDVTDS*RLCVFSMIPTH
Trigger: GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAGCTTCCGCAGTAATGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCCCAGCCCGCCGCTCCTaGGCTGCCCGGCCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIPARRS*AARPRV
Trigger: AACCCTTGGCCGGGCAGCGCAGGAGCGGCGGGCTGG...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACGGTGAACAGGATGGCTaGATCGTAGTGCTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHGEQDG*IVVLFV
Trigger: CACGAAGAGCACTACGATGCAGCCATCCTGTTCACC...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACCAATCACTGCACAGCTaGGCTCCGGAGAACATATGG +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHQSLHS*APENIW
Trigger: CCATATGTTCTCCGGAGCGCAGCTGTGCAGTGATTG...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGACTTTTATGTGGGTTaGTCCTTCAGGGATCCTCAC +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKADFYVG*SFRDPH
Trigger: GTGAGGATCCCTGAAGGAGCAACCCACATAAAAGTC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCTCTTGGGGCCCAGATaGGGATGCAGGAGTCTCGCA +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLLLGPR*GCRSLA
Trigger: TGCGAGACTCCTGCATCCCCATCTGGGCCCCAAGAG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCTGTGTCACAGGTCCTaGAGCAGGCCAGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLLCHRS*SRPAMD
Trigger: GTCCATGGCTGGCCTGCTCCAGGACCTGTGACACAG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCCGCCTCCACCAAGTCTaGGGTCCCGCGTTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSRLHQV*GPAFPD
Trigger: ATCTGGGAACGCGGGACCTCAGACTTGGTGGAGGCG...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACCATCCAGGAATTCTGTaGTGGTGGCTGACGTGCATT +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHHPGIL*WWLTCI
Trigger: AATGCACGTCAGCCACCATCACAGAATTCCTGGATG...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGTTTATCCTGGGCAGGTaGCGCGGCGGGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLFILGR*RGGAVS
Trigger: GCTGACAGCCCCGCCGCGGCACCTGCCCAGGATAAA...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCAGCCTGAGGCTGCCTaGTTTTATCCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLQPEAA*FYPGQV
Trigger: CACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAACTGATAGCCATTTTTaGCTTCACACTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKATDSHF*LHTAHG
Trigger: GCCATGAGCAGTGTGAAGCCAAAAATGGCTATCAGT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAAGCTGGTTATGTTGGTaGTGCCATTTGCAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKASWLCW*CHLQKF
Trigger: GAACTTTTGCAAATGGCAGCACCAACATAACCAGCT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTTTTCCATCCTGGCACTaGACGGTCCTAGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLFPSWH*TVLVCQ
Trigger: CTGGCACACTAGGACCGTGCAGTGCCAGGATGGAAA...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCCCACCTGGCGGGCCCTaGAGATGGAACGGCGCCTAC +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIPPGGP*RWNGAY
Trigger: GTAGGCGCCGTTCCATCTCCAGGGCCCGCCAGGTGG...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACAGATTTACCATTGGGTaGGCAGGGTGTAACACTGCA +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHRFTIG*AGCNTA
Trigger: TGCAGTGTTACACCCTGCCCACCCAATGGTAAATCT...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGCTTCACACTGCTCATaGCGAAAAGATTTACCATTG +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAASHCS*RKDLPL
Trigger: CAATGGTAAATCTTTTCGCCATGAGCAGTGTGAAGC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp GACCTGGACCGCACAGTCTCACTCACAAATGAGCTGTaGTTACCAGAGTTGTTCCTGCTTGTCCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: DLDRTVSLTNEL*LPELFLLVPCP
Trigger: AGGACATGGGACAAGCAGGAACAACTCTGGTAACAACAGCTCATTTGTGAGTGAGACTGTGCGGTCCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp CCAAGGGTGGCAACTTGTAAGCCAGGAGTTTTCTGCTaGTGGGTGGGGTTGATGGAAGAAGGAAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PRVATCKPGVFC*WVGLMEEGKTG
Trigger: TCCTGTCTTTCCTTCTTCCATCAACCCCACCCACAAGCAGAAAACTCCTGGCTTACAAGTTGCCACCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp TGGGTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTaGGGCACCTGGGCTAAGGCAAGAGGGTTTTATATA +
Preference number: 4 (lower is better)
Translates to: WVHLSQRTGSGD*GTWAKARGFYI
Trigger: TATATAAAACCCTCTTGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTTGTAGCGCGCATGCTTaGCTGCAAAGAAGCCATCGA +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLCSAHA*LQRSHR
Trigger: TCGATGGCTTCTTTGCAGTCAAGCATGCGCGCTACA...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAAGCAAACAATTACCATaGCCATCATCCAGGAATTCT +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKASKQLP*PSSRNS
Trigger: AGAATTCCTGGATGATGGTCATGGTAATTGTTTGCT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTCAAGGTAGCCCACTTTaGCACCGCCAGAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLQGSPL*HRQSRV
Trigger: AACTCTACTCTGGCGGTGGCAAAGTGGGCTACCTTG...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCGCGCACAGACATCCATaGCAGGGCACACCGAGTACT +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSAHRHP*QGTPST
Trigger: AGTACTCGGTGTGCCCTGGCATGGATGTCTGTGCGC...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GATTCTATTTCTTCCACCAAACTAGGGGCCTGCTATGGCTCCCAGACAACTCTTTGCCGGCAGGACACCTaGATATTTGGGAACCCATTC +
Preference number: 4 (lower is better)
Translates to: DSISSTKLGACYGSQTTLCRQDT*IFGNPF
Trigger: GAATGGGTTCCCAAATATGCAGGTGTCCTGCCGGCA...AAGAGTTGTCTGGGAGCCATAGCAGGCCCCTAGTTTGGTGGAAGAAATAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCTTCTGTGATGGTGGCTaGCGTGCATTTGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSFCDGG*RAFGPG
Trigger: CCCTGGTCCAAATGCACGTCAGCCACCATCACAGAA...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCCACTCCTCCCCCGCATaGGCGAGAACACTGACCCCA +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIHSSPA*ARTLTP
Trigger: TGGGGTCAGTGTTCTCGCTCATGCGGGGGAGGAGTG...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACTCTGGTCTTTGGCTTTaGACTGTCGGACTTTTATGT +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHSGLWL*TVGLLC
Trigger: ACATAAAAGTCCGACAGTTCAAAGCCAAAGACCAGA...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCGAGTGGTCCAGCAGCTaGGGGGCCAGCGCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFEWSSS*GASAER
Trigger: ACGCTCAGCGCTGGCCCCGCAGCTGCTGGACCACTC...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACTTTTGTCCACACATTTaGCTTGAAGGCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHFCPHI*LEGRLF
Trigger: GAAGAGTCTGCCTTCAAGGCAAATGTGTGGACAAAA...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCATGTTTTGACTCCTTTTaGATCAGACTGATAGCCATT +
Preference number: 4 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKACFDSF*IRLIAI
Trigger: AATGGCTATCAGTCTGATGCAAAAGGAGTCAAAACA...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGAGTTGCACTGCTGGGTaGCATCGTAGGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKSCTAG*HRRSVL
Trigger: CAGGACAGACCTACGATGCCACCCAGCAGTGCAACT...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGCAGCCGGCAGCTTCTTaGTCAGACACACCATTTGGC +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKQPAAS*SDTPFG
Trigger: GCCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTG...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACGGACACCTGCATATTTaGGAACCCATTCTACAAATG +
Preference number: 4 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHGHLHI*EPILQM
Trigger: CATTTGTAGAATGGGTTCCCAAATATGCAGGTGTCC...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp ACAGTCTCACTCACAAATGAGCTGTTGTTACCAGAGTaGTTCCTGCTTGTCCCATGTCCTACCACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TVSLTNELLLPE*FLLVPCPTTLV
Trigger: GACCAGAGTGGTAGGACATGGGACAAGCAGGAACAACTCTGGTAACAACAGCTCATTTGTGAGTGAGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGGCCCAAATGTCAAGTTaGACTGCTGGGTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKAQMSS*TAGWHR
Trigger: ACGATGCCACCCAGCAGTGCAACTTGACATTTGGGC...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCTGCCTGGTTTTATCCTaGGCAGGTGCCGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFCLVLS*AGAAAG
Trigger: CCCCGCCGCGGCACCTGCCCAGGATAAAACCAGGCA...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGTGGCTGACGTGCATTTaGACCAGGGCTTGGATGCAT +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKWLTCI*TRAWMH
Trigger: ATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCA...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCGCCGCTGCTGCAGCCTaGGGCTGCCTGGTTTTATCC +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFAAAAA*GCLVLS
Trigger: GGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGC...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCTTCTCAATGCTTGCATaGCTGTACAGCCTGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSFSMLA*LYSLLA
Trigger: CGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAA...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCCTAGGGATCGAGGGCTaGCGTCCACGGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFLGIEG*RPRCLC
Trigger: ACAGAGGCACCGTGGACGGCAGCCCTCGATCCCTAG...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCTGGCCCTCTTCCCTGTaGAGTAGCGGCCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIWPSSL*SSGHCF
Trigger: GAAACAGTGGCCGCTACTGCACAGGGAAGAGGGCCA...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp GACCAGGCTGTGAGAAGCCAATGGATGATGACTGGTTaGGGAGGGCATTGGTCTGTTTCACAAAATAATCTC +
Preference number: 4 (lower is better)
Translates to: DQAVRSQWMMTG*GGHWSVSQNNL
Trigger: GAGATTATTTTGTGAAACAGACCAATGCCCTCCCAAACCAGTCATCATCCATTGGCTTCTCACAGCCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGATTTGCAAAAGTTCTTaGGGGTCGTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKICKSS*GSWPHS
Trigger: AGAATGCGGCCACGACCCTCAAGAACTTTTGCAAAT...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGAGATGCCCAATTTCATaGGCCACAGTGAAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLRCPIS*ATVKAA
Trigger: TGCAGCCTTCACTGTGGCTCATGAAATTGGGCATCT...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCAAGAGGAGCTCCACCTaGCGGGCCCTGGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFKRSST*RALEME
Trigger: TTCCATCTCCAGGGCCCGCCAGGTGGAGCTCCTCTT...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGACAGTGAAGGCTGCATaGAGGCCATCATCTTCAATC +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKTVKAA*RPSSSI
Trigger: GATTGAAGATGATGGCCTCCATGCAGCCTTCACTGT...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp TCACAAATGAGCTGTTGTTACCAGAGTTGTTCCTGCTaGTCCCATGTCCTACCACTCTGGTCTGATAGTAGT +
Preference number: 4 (lower is better)
Translates to: SQMSCCYQSCSC*SHVLPLWSDSS
Trigger: ACTACTATCAGACCAGAGTGGTAGGACATGGGACAAGCAGGAACAACTCTGGTAACAACAGCTCATTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGGGATGTGGTTCTCAATaGTTGCATGACTGTACAGCC +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLGCGSQ*LHDCTA
Trigger: GGCTGTACAGTCATGCAAGCATTGAGAACCACATCC...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCAAGCTTGCACACATCTaGCGGCAGGACACCTGCATA +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIKLAHI*RQDTCI
Trigger: TATGCAGGTGTCCTGCCGGCAGATGTGTGCAAGCTT...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCGGACACACACAGAGTTaGTGTACGGCCTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIGHTQS*CTACIQ
Trigger: CTGAATGCAGGCCGTACAGCAACTCTGTGTGTGTCC...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCCAGACATTGCTTAAATaGAGAAGGCCTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSQTLLK*RRPLRE
Trigger: CTCTCTCAGAGGCCTTCTGCATTTAAGCAATGTCTG...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCCATACATCCTGGCCATaGACGAGTCAGCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIHTSWP*TSQPPR
Trigger: TCTTGGTGGCTGACTCGTCCATGGCCAGGATGTATG...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCATAAATCCTCTCGGGTaGACAGGATGGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIINPLG*TGWLHR
Trigger: ACGATGCAGCCATCCTGTTCACCCGAGAGGATTTAT...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGTTCTTCAGCAGACATTaGTTAAATGCAGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKFFSRH*LNAEGL
Trigger: GAGGCCTTCTGCATTTAAGCAATGTCTGCTGAAGAA...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCAGTTGGTCTATATTCTaGACCAGCCCGCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFSWSIF*TSPPLL
Trigger: CAGGAGCGGCGGGCTGGTCCAGAATATAGACCAACT...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGCCTAGCTGGTTATGTTaGTGCTGCCATTTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLPSWLC*CCHLQK
Trigger: CTTTTGCAAATGGCAGCACCAACATAACCAGCTAGG...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGGCAGTGAATCTAGTCTaGTCTTTGGCTTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKAVNLV*SLALNC
Trigger: ACAGTTCAAAGCCAAAGACCAGACTAGATTCACTGC...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCTCAGGATTTCTTTTGTaGCTGAATAGCCCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSSGFLL*LNSPSH
Trigger: ATGGGATGGGCTATTCAGCCACAAAAGAAATCCTGA...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGACCTTGTTGCTGCCATaGCTGATGACAGAGTTTACT +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLTLLLP*LMTEFT
Trigger: AGTAAACTCTGTCATCAGCCATGGCAGCAACAAGGT...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCGCTCCGGAGAACATATaGTCCCAACGTCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFAPENI*SQRLPF
Trigger: GAATGGCAGACGTTGGGACCATATGTTCTCCGGAGC...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGCCCATCCGTAACCTTTaGAGAAAAGACCACATAGTA +
Preference number: 4 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLPIRNL*RKDHIV
Trigger: TACTATGTGGTCTTTTCTCCAAAGGTTACGGATGGG...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCTTCCTGTTTCCATCCTaGCACTGCACGGTCCTAGTG +
Preference number: 4 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFFLFPS*HCTVLV
Trigger: CACTAGGACCGTGCAGTGCCAGGATGGAAACAGGAA...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCAGGGTGTCACATGAATaGTGCCCACATAAATCCTCT +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIRVSHE*CPHKSS
Trigger: AGAGGATTTATGTGGGCATCATTCATGTGACACCCT...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR TCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCGTCGATGATGGTCTCTaGAGTGGAAATCATGTACTT +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIVDDGL*SGNHVL
Trigger: AAGTACATGATTTCCACTTCAGAGACCATCATCGAC...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR GCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCTGGTTATGTTGGTGCTaGCATTTGCAAAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMIWLCWC*HLQKFL
Trigger: CAAGAACTTTTGCAAATGGCAGCACCAACATAACCA...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CCA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCTCTCTTCACAGAATTTaGAATCGTCATGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RMHLQTVKISCVSWLNMISLHRI*NRHEKG
Trigger: GCCTTTCTCATGACGATTCCAAATTCTGTGAAGAGA...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp CTCTCAGTCAGAAGTCTAACCTTACAATTTTACACATaGATGAGAACCCCTACTCTAATTACACTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LSVRSLTLQFYT*MRTPTLITLSV
Trigger: TACAGAGAGTGTAATTAGAGTAGGGGTTCTCATCAATGTGTAAAATTGTAAGGTTAGACTTCTGACTGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
3UTR CAA 72 bp CTAGTTTGGTTTCTTGAATTAGTTGAACTGATCCGATaGCTCGTTCAAGATGAGGCTAAATACGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LVWFLELVELIR*LVQDEAKYEMI
Trigger: AATCATTTCGTATTTAGCCTCATCTTGAACGAGCAATCGGATCAGTTCAACTAATTCAAGAAACCAAACTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp GCGGCTGGTCCGGCTCGGCGGCCGCTGCTGCAGCCTGAGGCTGCCTaGTTTTATCCTGGGCAGGTGCCGCGGCGGGGCTGTCAGCGGCCA +
Preference number: 5 (lower is better)
Translates to: AAGPARRPLLQPEAA*FYPGQVPRRGCQRP
Trigger: TGGCCGCTGACAGCCCCGCCGCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCGGACCAGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp GGCCGCTGCTGCAGCCTGAGGCTGCCTGGTTTTATCCTGGGCAGGTaGCGCGGCGGGGCTGTCAGCGGCCAGGGACAGGCAGGACGCGCT +
Preference number: 5 (lower is better)
Translates to: GRCCSLRLPGFILGR*RGGAVSGQGQAGRA
Trigger: AGCGCGTCCTGCCTGTCCCTGGCCGCTGACAGCCCCGCCGCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CCGTGTTTCCTCCCCCTGCGGCTGGTCCGGCTCGGCGGCCGCTGCTaGAGCCTGAGGCTGCCTGGTTTTATCCTGGGCAGGTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: PCFLPLRLVRLGGRC*SLRLPGFILGRCRG
Trigger: GCCGCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCGGACCAGCCGCAGGGGGAGGAAACACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CTCCCGTGTTTCCTCCCCCTGCGGCTGGTCCGGCTCGGCGGCCGCTaGTGCAGCCTGAGGCTGCCTGGTTTTATCCTGGGCAGGTGCCGC +
Preference number: 5 (lower is better)
Translates to: LPCFLPLRLVRLGGR*CSLRLPGFILGRCR
Trigger: GCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCGGACCAGCCGCAGGGGGAGGAAACACGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp CCATGGACGAGTCAGCCACCAAGAGGAGCTCCACCTGGCGGGCCCTaGAGATGGAACGGCGCCTACGCCTCCACCAAGTCTGAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: PWTSQPPRGAPPGGP*RWNGAYASTKSEVP
Trigger: CGGGACCTCAGACTTGGTGGAGGCGTAGGCGCCGTTCCATCTCCAGGGCCCGCCAGGTGGAGCTCCTCTTGGTGGCTGACTCGTCCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp GGGTCAGCAGGTAATGCTGCAGGCCCCGCCCATACATCCTGGCCATaGACGAGTCAGCCACCAAGAGGAGCTCCACCTGGCGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GSAGNAAGPAHTSWP*TSQPPRGAPPGGPW
Trigger: CCAGGGCCCGCCAGGTGGAGCTCCTCTTGGTGGCTGACTCGTCCATGGCCAGGATGTATGGGCGGGGCCTGCAGCATTACCTGCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp TCTCCTAGATCTACTGTGCACCGAGGGGCTCTCTTGGGGCCCAGATaGGGATGCAGGAGTCTCGCAACTGGCGCGTGGCGGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SPRSTVHRGALLGPR*GCRSLATGAWRQGL
Trigger: GAGGCCCTGCCGCCACGCGCCAGTTGCGAGACTCCTGCATCCCCATCTGGGCCCCAAGAGAGCCCCTCGGTGCACAGTAGATCTAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp AGGCCAGGGTCAGCAGGTAATGCTGCAGGCCCCGCCCATACATCCTaGCCATGGACGAGTCAGCCACCAAGAGGAGCTCCACCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: RPGSAGNAAGPAHTS*PWTSQPPRGAPPGG
Trigger: CCCGCCAGGTGGAGCTCCTCTTGGTGGCTGACTCGTCCATGGCCAGGATGTATGGGCGGGGCCTGCAGCATTACCTGCTGACCCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp CTCTTGGGGCCCAGATGGGGATGCAGGAGTCTCGCAACTGGCGCGTaGCGGCAGGGCCTCGAAGCTAAAGCCCTCGCGGTTGTAGACATG +
Preference number: 5 (lower is better)
Translates to: LLGPRWGCRSLATGA*RQGLEAKALAVVDM
Trigger: CATGTCTACAACCGCGAGGGCTTTAGCTTCGAGGCCCTGCCGCCACGCGCCAGTTGCGAGACTCCTGCATCCCCATCTGGGCCCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CATCGAGACCCCCGCAGAGGTCAAAGACAGCTAGGGATCGAGGGCTaGCGTCCACGGTGCCTCTGTAGAAACAGTGACCCCGGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: HRDPRRGQRQLGIEG*RPRCLCRNSDPGGQ
Trigger: CTGGCCACCGGGGTCACTGTTTCTACAGAGGCACCGTGGACGGCAGCCCTCGATCCCTAGCTGTCTTTGACCTCTGCGGGGGTCTCGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp GGAGTGCCCTCCACAGCCGGCAGCTTCTTGGTCAGACACACCATTTaGCCTTGGCGCACCACAGCACACCACAGCCGCGCACAGACATCC +
Preference number: 5 (lower is better)
Translates to: GVPSTAGSFLVRHTI*PWRTTAHHSRAQTS
Trigger: GGATGTCTGTGCGCGGCTGTGGTGTGCTGTGGTGCGCCAAGGCCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTGTGGAGGGCACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CCAGCAGGAACCTCCGGCCGCCCGCGTAGACAAGGTAGCCCACTTTaGCACCGCCAGAGTAGAGTTGGTCTATATTCTGGACCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: PAGTSGRPRRQGSPL*HRQSRVGLYSGPAR
Trigger: GCGGGCTGGTCCAGAATATAGACCAACTCTACTCTGGCGGTGGCAAAGTGGGCTACCTTGTCTACGCGGGCGGCCGGAGGTTCCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CGCAGAGGTCAAAGACAGCTAGGGATCGAGGGCTGCCGTCCACGGTaGCTCTGTAGAAACAGTGACCCCGGTGGCCAGAGGATGCGCTCA +
Preference number: 5 (lower is better)
Translates to: RRGQRQLGIEGCRPR*LCRNSDPGGQRMRS
Trigger: TGAGCGCATCCTCTGGCCACCGGGGTCACTGTTTCTACAGAGGCACCGTGGACGGCAGCCCTCGATCCCTAGCTGTCTTTGACCTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CGCCAGAGTAGAGTTGGTCTATATTCTGGACCAGCCCGCCGCTCCTaGGCTGCCCGGCCAAGGGTTGTAAATGGCCTCGCTCCCGTGTTT +
Preference number: 5 (lower is better)
Translates to: RQSRVGLYSGPARRS*AARPRVVNGLAPVF
Trigger: AAACACGGGAGCGAGGCCATTTACAACCCTTGGCCGGGCAGCGCAGGAGCGGCGGGCTGGTCCAGAATATAGACCAACTCTACTCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp GGCCTTGGCGCACCACAGCACACCACAGCCGCGCACAGACATCCATaGCAGGGCACACCGAGTACTCAGGCCCAAATGTCAAGTTGCACT +
Preference number: 5 (lower is better)
Translates to: GLGAPQHTTAAHRHP*QGTPSTQAQMSSCT
Trigger: AGTGCAACTTGACATTTGGGCCTGAGTACTCGGTGTGCCCTGGCATGGATGTCTGTGCGCGGCTGTGGTGTGCTGTGGTGCGCCAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp CCAGGCGGATGTGGTTCTCAATGCTTGCATGACTGTACAGCCTGTTaGCGATGGAGGCCAGGGTCAGCAGGTAATGCTGCAGGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PGGCGSQCLHDCTAC*RWRPGSAGNAAGPA
Trigger: GGCGGGGCCTGCAGCATTACCTGCTGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAACCACATCCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp GAAACAGTGACCCCGGTGGCCAGAGGATGCGCTCAGCCCTCCTCCTaGAGTAACGATGCTACCAGCAGCACCCACTGTGTCATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ETVTPVARGCAQPSS*SNDATSSTHCVISL
Trigger: GAGAGAGATGACACAGTGGGTGCTGCTGGTAGCATCGTTACTGCAGGAGGAGGGCTGAGCGCATCCTCTGGCCACCGGGGTCACTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 90 bp CCCAGGACCCACGCAGGAGTGGCTTTAGAGTGTAGCGCGCATGCTTaGCTGCAAAGAAGCCATCGAGACCCCCGCAGAGGTCAAAGACAG +
Preference number: 5 (lower is better)
Translates to: PRTHAGVALECSAHA*LQRSHRDPRRGQRQ
Trigger: CTGTCTTTGACCTCTGCGGGGGTCTCGATGGCTTCTTTGCAGTCAAGCATGCGCGCTACACTCTAAAGCCACTCCTGCGTGGGTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp TCAGCACCACCACCTTCACCACCGCCAGGCGGATGTGGTTCTCAATaGTTGCATGACTGTACAGCCTGTTGGCGATGGAGGCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SAPPPSPPPGGCGSQ*LHDCTACWRWRPGS
Trigger: TGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAACCACATCCGCCTGGCGGTGGTGAAGGTGGTGGTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CATCCATGCCAGGGCACACCGAGTACTCAGGCCCAAATGTCAAGTTaGACTGCTGGGTGGCATCGTAGGTCTGTCCTGGGAGTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: HPCQGTPSTQAQMSS*TAGWHRRSVLGVPR
Trigger: CCGAGGAACTCCCAGGACAGACCTACGATGCCACCCAGCAGTGCAACTTGACATTTGGGCCTGAGTACTCGGTGTGCCCTGGCATGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp CCACACATTTGCCTTGAAGGCAGACTCTTCCCTTCCCACAGGGAGTaGCCTCCACAGCCGGCAGCTTCTTGGTCAGACACACCATTTGGC +
Preference number: 5 (lower is better)
Translates to: PHICLEGRLFPSHRE*PPQPAASWSDTPFG
Trigger: GCCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTGTGGAGGGCACTCCCTGTGGGAAGGGAAGAGTCTGCCTTCAAGGCAAATGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp GGATGTGGTTCTCAATGCTTGCATGACTGTACAGCCTGTTGGCGATaGAGGCCAGGGTCAGCAGGTAATGCTGCAGGCCCCGCCCATACA +
Preference number: 5 (lower is better)
Translates to: GCGSQCLHDCTACWR*RPGSAGNAAGPAHT
Trigger: TGTATGGGCGGGGCCTGCAGCATTACCTGCTGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAACCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp GTATATGGCCCTCTTCCCTGTGCAGTAGCGGCCACTGTTTCGAGGTaGAGGGTTATTACAATGGCGGTAGGCAAACTGCACTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: VYGPLPCAVAATVSR*RVITMAVGKLHSSP
Trigger: GGGGGAGGAGTGCAGTTTGCCTACCGCCATTGTAATAACCCTGCACCTCGAAACAGTGGCCGCTACTGCACAGGGAAGAGGGCCATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp TTAGCTAATTTCCTGTTTCCATCCTGGCACTGCACGGTCCTAGTGTaGCAGCCTGTGTCACAGGTCCTGGAGCAGGCCAGCCATGGACCT +
Preference number: 5 (lower is better)
Translates to: LANFLFPSWHCTVLV*QPVSQVLEQASHGP
Trigger: AGGTCCATGGCTGGCCTGCTCCAGGACCTGTGACACAGGCTGGCACACTAGGACCGTGCAGTGCCAGGATGGAAACAGGAAATTAGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp GCAGGCCAGCCATGGACCTGTCACCCACTGCAGCTGTGTAGAGTGTaGTCCCACCTTGTTGCTGCCATGGCTGATGACAGAGTTTACTTT +
Preference number: 5 (lower is better)
Translates to: AGQPWTCHPLQLCRV*SHLVAAMADDRVYF
Trigger: AAAGTAAACTCTGTCATCAGCCATGGCAGCAACAAGGTGGGACCACACTCTACACAGCTGCAGTGGGTGACAGGTCCATGGCTGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAGTCCACACATTTGCCTaGAAGGCAGACTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKAVHTFA*KADSSL
Trigger: AAGGGAAGAGTCTGCCTTCAAGGCAAATGTGTGGAC...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACCATTTGGACCAGGGCTaGGATGCATCGATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHHLDQG*DASMLV
Trigger: TACCAGCATCGATGCATCCAAGCCCTGGTCCAAATG...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp CACAGAGTTGCTGTACGGCCTGCATTCAGTCCCATCCGTAACCTTTaGAGAAAAGACCACATAGTAGCCTGTGCCCTTAGCTCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HRVAVRPAFSPIRNL*RKDHIVACALSSAG
Trigger: ACCTGCAGAGCTAAGGGCACAGGCTACTATGTGGTCTTTTCTCCAAAGGTTACGGATGGGACTGAATGCAGGCCGTACAGCAACTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACGGACTTTTATGTGGGTaGCTCCTTCAGGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHGLLCG*LLQGSS
Trigger: TGAGGATCCCTGAAGGAGCAACCCACATAAAAGTCC...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp GTTCACCTGTCCCAAAGAACTGGGTCTGGGGATTTGGGCACCTGGGCTAAGGCAAATCTAGTCTGGTCTTaGGCTTTGAACTGTCGGACT +
Preference number: 5 (lower is better)
Translates to: VHLSQRTGSGDLGTWAKANLVWS*ALNCRT
Trigger: AGTCCGACAGTTCAAAGCCAAAGACCAGACTAGATT...TGCCTTAGCCCAGGTGCCCAAATCCCCAGACCCAGTTCTTTGGGACAGGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 90 bp CGTCATGAGAAAGGCCAAGTAGATGCCCAATTTCATGAGCCACAGTaGAGGCTGCATGGAGGCCATCATCTTCAATCACTGCACAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHEKGQVDAQFHEPQ*RLHGGHHLQSLHSC
Trigger: GCAGCTGTGCAGTGATTGAAGATGATGGCCTCCATGCAGCCTTCACTGTGGCTCATGAAATTGGGCATCTACTTGGCCTTTCTCATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTATGTTCCCTGCTGGTTGCACTGACTGACCTTGTTAATTTGCTAACAAGGAAGGCTCTGCAGGTAAGCTaGCACACATCTGCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LCSLLVALTDLVNLLTRKALQVS*HTSAGR
Trigger: CCTGCCGGCAGATGTGTGCAAGCTTACCTGCAGAGC...CTTCCTTGTTAGCAAATTAACAAGGTCAGTCAGTGCAACCAGCAGGGAACATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp ATAGTAGCCTGTGCCCTTAGCTCTGCAGGTAAGCTTGCACACATCTaGCGGCAGGACACCTGCATATTTGGGAACCCATTCTACAAATGT +
Preference number: 5 (lower is better)
Translates to: IVACALSSAGKLAHI*RQDTCIFGNPFYKC
Trigger: ACATTTGTAGAATGGGTTCCCAAATATGCAGGTGTCCTGCCGGCAGATGTGTGCAAGCTTACCTGCAGAGCTAAGGGCACAGGCTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 90 bp ATTTTTGGCTTCACACTGCTCATGGCGAAAAGATTTACCATTGGGTaGGCAGGGTGTAACACTGCAGGAACGGTATATGGCCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: IFGFTLLMAKRFTIG*AGCNTAGTVYGPLP
Trigger: GGGAAGAGGGCCATATACCGTTCCTGCAGTGTTACACCCTGCCCACCCAATGGTAAATCTTTTCGCCATGAGCAGTGTGAAGCCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCGTGGCTGACGTGCATTaGGACCAGGGCTTGGATGCA +
Preference number: 5 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSVADVH*DQGLDA
Trigger: TGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCAC...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 90 bp CAAACAATTACCATGACCATCATCCAGGAATTCTGTGATGGTGGCTaGCGTGCATTTGGACCAGGGCTTGGATGCATCGATGCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: QTITMTIIQEFCDGG*RAFGPGLGCIDAGK
Trigger: CTTACCAGCATCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGATGGTCATGGTAATTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 90 bp GTAGGTCTAGCAAACAATTACCATGACCATCATCCAGGAATTCTGTaGTGGTGGCTGACGTGCATTTGGACCAGGGCTTGGATGCATCGA +
Preference number: 5 (lower is better)
Translates to: VGLANNYHDHHPGIL*WWLTCIWTRAWMHR
Trigger: TCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGATGGTCATGGTAATTGTTTGCTAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACAGGACACCTGCATATTaGGGAACCCATTCTACAAAT +
Preference number: 5 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHRTPAY*GTHSTN
Trigger: ATTTGTAGAATGGGTTCCCAAATATGCAGGTGTCCT...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTGGATGTGACAGACAGCTTGCGGCTCTGCGTGTTCTCTATGATCCCTACACACATCATGTACTTGCCATaGATAAGGTACTCGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LDVTDSLRLCVFSMIPTHIMYLP*IRYSPV
Trigger: AACTGGCGAGTACCTTATCAATGGCAAGTACATGAT...GTGTGTAGGGATCATAGAGAACACGCAGAGCCGCAAGCTGTCTGTCACATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGTGTGGTCCCACCTTGTaGCTGCCATGGCTGATGACA +
Preference number: 5 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLCGPTL*LPWLMT
Trigger: TGTCATCAGCCATGGCAGCAACAAGGTGGGACCACA...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 90 bp TCTAGTCTGGTCTTTGGCTTTGAACTGTCGGACTTTTATGTGGGTTaGTCCTTCAGGGATCCTCACAACGTCAGTATAACCCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SSLVFGFELSDFYVG*SFRDPHNVSITLAF
Trigger: AAAAGCAAGGGTTATACTGACGTTGTGAGGATCCCTGAAGGAGCAACCCACATAAAAGTCCGACAGTTCAAAGCCAAAGACCAGACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGCATTTGCAAAAGTTCTaGAGGGTCGTGGCCGCATTC +
Preference number: 5 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLHLQKF*RVVAAF
Trigger: GAATGCGGCCACGACCCTCAAGAACTTTTGCAAATG...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCACAGCCGGCAGCTTCTaGGTCAGACACACCATTTGG +
Preference number: 5 (lower is better)
Translates to: RMHLQTVKISCVSWLNMITAGSF*VRHTIW
Trigger: CCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTGT...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCCCGCACACTCCACACTaGTCATATTGTAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSPHTPH*SYCSFE
Trigger: CTCAAAGCTACAATATGACAAGTGTGGAGTGTGCGG...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 90 bp TCCACTGTAGTTCATGACGGTACCATTGATGTCGATGATGGTCTCTaGAGTGGAAATCATGTACTTGCCATTGATAAGGTACTCGCCAGT +
Preference number: 5 (lower is better)
Translates to: STVVHDGTIDVDDGL*SGNHVLAIDKVLAS
Trigger: ACTGGCGAGTACCTTATCAATGGCAAGTACATGATTTCCACTTCAGAGACCATCATCGACATCAATGGTACCGTCATGAACTACAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGTGTTGGTGCTGCCATTaGCAAAAGTTCTTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLCWCCH*QKFLRV
Trigger: GACCCTCAAGAACTTTTGCAAATGGCAGCACCAACA...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CTTCTCTGCCATCTTCAAATGTCCCCGATTCTACATTCATCATTGTGTGTCTCCGTCTGGTCTTTGGCTTaGAACTGTCGGACTTTTATG +
Preference number: 5 (lower is better)
Translates to: LLCHLQMSPILHSSLCVSVWSLA*NCRTFM
Trigger: CATAAAAGTCCGACAGTTCAAAGCCAAAGACCAGAC...GGAGACACACAATGATGAATGTAGAATCGGGGACATTTGAAGATGGCAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CGGATGCATTTACAAACAGTAAAAATAAGCTGTGTGTCATGGCTGAACATGATCTGTGGTTCTCAATGCTaGCATGACTGTACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RMHLQTVKISCVSWLNMICGSQC*HDCTAC
Trigger: ACAGGCTGTACAGTCATGCAAGCATTGAGAACCACA...GATCATGTTCAGCCATGACACACAGCTTATTTTTACTGTTTGTAAATGCATCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp AGGAAAACACAGTTTCTACACCCAAATGATACAATAACTTGGCTTGGCTGCCTGGTGGAAATCATGTACTaGCCATTGATAAGGTACTCG +
Preference number: 5 (lower is better)
Translates to: RKTQFLHPNDTITWLGCLVEIMY*PLIRYS
Trigger: CGAGTACCTTATCAATGGCAAGTACATGATTTCCAC...CAGGCAGCCAAGCCAAGTTATTGTATCATTTGGGTGTAGAAACTGTGTTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS-3UTR CAA 90 bp CATTTAGTGGAATTCCAGAGAGGATTTCTCAAAATCCTTCTATGCAAATCTTTCGAAGACATTAAACGCTaGTCTTCTGTAGTACCGAAG +
Preference number: 5 (lower is better)
Translates to: HLVEFQRGFLKILLCKSFEDIKR*SSVVPK
Trigger: CTTCGGTACTACAGAAGACAAGCGTTTAATGTCTTC...GAAAGATTTGCATAGAAGGATTTTGAGAAATCCTCTCTGGAATTCCACTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp CCGGCTCGGCGGCCGCTGCTGCAGCCTGAGGCTGCCTaGTTTTATCCTGGGCAGGTGCCGCGGCGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: PARRPLLQPEAA*FYPGQVPRRGC
Trigger: ACAGCCCCGCCGCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp TTCCTCCCCCTGCGGCTGGTCCGGCTCGGCGGCCGCTaGTGCAGCCTGAGGCTGCCTGGTTTTATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: FLPLRLVRLGGR*CSLRLPGFILG
Trigger: GCCCAGGATAAAACCAGGCAGCCTCAGGCTGCAGCAGCGGCCGCCGAGCCGGACCAGCCGCAGGGGGAGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp GGTTGTAAATGGCCTCGCTCCCGTGTTTCCTCCCCCTaGGGCTGGTCCGGCTCGGCGGCCGCTGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: GCKWPRSRVSSP*GWSGSAAAAAA
Trigger: GGCTGCAGCAGCGGCCGCCGAGCCGGACCAGCCGCAGGGGGAGGAAACACGGGAGCGAGGCCATTTACAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp TGCAGCCTGAGGCTGCCTGGTTTTATCCTGGGCAGGTaGCGCGGCGGGGCTGTCAGCGGCCAGGGACAGGCA +
Preference number: 6 (lower is better)
Translates to: CSLRLPGFILGR*RGGAVSGQGQA
Trigger: TGCCTGTCCCTGGCCGCTGACAGCCCCGCCGCGGCACCTGCCCAGGATAAAACCAGGCAGCCTCAGGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp CCCAGATGGGGATGCAGGAGTCTCGCAACTGGCGCGTaGCGGCAGGGCCTCGAAGCTAAAGCCCTCGCGGTT +
Preference number: 6 (lower is better)
Translates to: PRWGCRSLATGA*RQGLEAKALAV
Trigger: AACCGCGAGGGCTTTAGCTTCGAGGCCCTGCCGCCACGCGCCAGTTGCGAGACTCCTGCATCCCCATCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp GCCCGCGTAGACAAGGTAGCCCACTTTGCCACCGCCAGAGTAGAGTaGGTCTATATTCTGGACCAGCCCGCCGCTCCTGCGCTGCCCGGC +
Preference number: 6 (lower is better)
Translates to: ARVDKVAHFATARVE*VYILDQPAAPALPG
Trigger: GCCGGGCAGCGCAGGAGCGGCGGGCTGGTCCAGAATATAGACCAACTCTACTCTGGCGGTGGCAAAGTGGGCTACCTTGTCTACGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp ACCCCGGTGGCCAGAGGATGCGCTCAGCCCTCCTCCTaGAGTAACGATGCTACCAGCAGCACCCACTGTGTC +
Preference number: 6 (lower is better)
Translates to: TPVARGCAQPSS*SNDATSSTHCV
Trigger: GACACAGTGGGTGCTGCTGGTAGCATCGTTACTGCAGGAGGAGGGCTGAGCGCATCCTCTGGCCACCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp GGTAATGCTGCAGGCCCCGCCCATACATCCTGGCCATaGACGAGTCAGCCACCAAGAGGAGCTCCACCTGGC +
Preference number: 6 (lower is better)
Translates to: GNAAGPAHTSWP*TSQPPRGAPPG
Trigger: GCCAGGTGGAGCTCCTCTTGGTGGCTGACTCGTCCATGGCCAGGATGTATGGGCGGGGCCTGCAGCATTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp GCCCTCCACAGCCGGCAGCTTCTTGGTCAGACACACCATTTGGCCTaGGCGCACCACAGCACACCACAGCCGCGCACAGACATCCATGCC +
Preference number: 6 (lower is better)
Translates to: ALHSRQLLGQTHHLA*AHHSTPQPRTDIHA
Trigger: GGCATGGATGTCTGTGCGCGGCTGTGGTGTGCTGTGGTGCGCCAAGGCCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTGTGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp GGGAGTGCCCTCCACAGCCGGCAGCTTCTTGGTCAGACACACCATTaGGCCTTGGCGCACCACAGCACACCACAGCCGCGCACAGACATC +
Preference number: 6 (lower is better)
Translates to: GSALHSRQLLGQTHH*ALAHHSTPQPRTDI
Trigger: GATGTCTGTGCGCGGCTGTGGTGTGCTGTGGTGCGCCAAGGCCAAATGGTGTGTCTGACCAAGAAGCTGCCGGCTGTGGAGGGCACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp CTGGAGATGGAACGGCGCCTACGCCTCCACCAAGTCTaGGGTCCCGCGTTCCCAGATGGCGAGAAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: LEMERRLRLHQV*GPAFPDGEKAE
Trigger: CTCAGCTTTCTCGCCATCTGGGAACGCGGGACCTCAGACTTGGTGGAGGCGTAGGCGCCGTTCCATCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp CCCCGCAGAGGTCAAAGACAGCTAGGGATCGAGGGCTaGCGTCCACGGTGCCTCTGTAGAAACAGTGACCCC +
Preference number: 6 (lower is better)
Translates to: PRRGQRQLGIEG*RPRCLCRNSDP
Trigger: GGGGTCACTGTTTCTACAGAGGCACCGTGGACGGCAGCCCTCGATCCCTAGCTGTCTTTGACCTCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp AGAGTTGGTCTATATTCTGGACCAGCCCGCCGCTCCTaGGCTGCCCGGCCAAGGGTTGTAAATGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: RVGLYSGPARRS*AARPRVVNGLA
Trigger: AGCGAGGCCATTTACAACCCTTGGCCGGGCAGCGCAGGAGCGGCGGGCTGGTCCAGAATATAGACCAACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp TTCCCAGATGGCGAGAAAGCTGAGTGGTCCAGCAGCTaGGGGGCCAGCGCTGAGCGTCTCCTAGATCTACTG +
Preference number: 6 (lower is better)
Translates to: FPDGEKAEWSSS*GASAERLLDLL
Trigger: CAGTAGATCTAGGAGACGCTCAGCGCTGGCCCCGCAGCTGCTGGACCACTCAGCTTTCTCGCCATCTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp GTCCTGGAGCAGGCCAGCCATGGACCTGTCACCCACTaGAGCTGTGTAGAGTGTGGTCCCACCTTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VLEQASHGPVTH*SCVECGPTLLL
Trigger: CAGCAACAAGGTGGGACCACACTCTACACAGCTGCAGTGGGTGACAGGTCCATGGCTGGCCTGCTCCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp TCAGCAGGTAATGCTGCAGGCCCCGCCCATACATCCTaGCCATGGACGAGTCAGCCACCAAGAGGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: SAGNAAGPAHTS*PWTSQPPRGAP
Trigger: TGGAGCTCCTCTTGGTGGCTGACTCGTCCATGGCCAGGATGTATGGGCGGGGCCTGCAGCATTACCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp GACAAGGTAGCCCACTTTGCCACCGCCAGAGTAGAGTaGGTCTATATTCTGGACCAGCCCGCCGCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: DKVAHFATARVE*VYILDQPAAPA
Trigger: CGCAGGAGCGGCGGGCTGGTCCAGAATATAGACCAACTCTACTCTGGCGGTGGCAAAGTGGGCTACCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp CACGCAGGAGTGGCTTTAGAGTGTAGCGCGCATGCTTaGCTGCAAAGAAGCCATCGAGACCCCCGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: HAGVALECSAHA*LQRSHRDPRRG
Trigger: ACCTCTGCGGGGGTCTCGATGGCTTCTTTGCAGTCAAGCATGCGCGCTACACTCTAAAGCCACTCCTGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp CAGGGCACACCGAGTACTCAGGCCCAAATGTCAAGTTaGACTGCTGGGTGGCATCGTAGGTCTGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: QGTPSTQAQMSS*TAGWHRRSVLG
Trigger: TCCCAGGACAGACCTACGATGCCACCCAGCAGTGCAACTTGACATTTGGGCCTGAGTACTCGGTGTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp TCTCAATGCTTGCATGACTGTACAGCCTGTTGGCGATaGAGGCCAGGGTCAGCAGGTAATGCTGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: SQCLHDCTACWR*RPGSAGNAAGP
Trigger: GGGGCCTGCAGCATTACCTGCTGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp CAAGTTGCACTGCTGGGTGGCATCGTAGGTCTGTCCTaGGAGTTCCTCGGGACCCAAAATCTGCTTCCGTGG +
Preference number: 6 (lower is better)
Translates to: QVALLGGIVGLS*EFLGTQNLLPW
Trigger: CCACGGAAGCAGATTTTGGGTCCCGAGGAACTCCCAGGACAGACCTACGATGCCACCCAGCAGTGCAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp CCTTCACCACCGCCAGGCGGATGTGGTTCTCAATGCTaGCATGACTGTACAGCCTGTTGGCGATGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: PSPPPGGCGSQC*HDCTACWRWRP
Trigger: TGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAACCACATCCGCCTGGCGGTGGTGAAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp TGGTGCTGCCATTTGCAAAAGTTCTTGAGGGTCGTGGCCGCATTCTaGCTCACCTCCAGACTCGTGTCCTTGTCCGTCAGCACCACCACC +
Preference number: 6 (lower is better)
Translates to: WCCHLQKFLRVVAAF*LTSRLVSLSVSTTT
Trigger: GGTGGTGGTGCTGACGGACAAGGACACGAGTCTGGAGGTGAGCAAGAATGCGGCCACGACCCTCAAGAACTTTTGCAAATGGCAGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp AGTACTCAGGCCCAAATGTCAAGTTGCACTGCTGGGTaGCATCGTAGGTCTGTCCTGGGAGTTCCTCGGGAC +
Preference number: 6 (lower is better)
Translates to: STQAQMSSCTAG*HRRSVLGVPRD
Trigger: GTCCCGAGGAACTCCCAGGACAGACCTACGATGCCACCCAGCAGTGCAACTTGACATTTGGGCCTGAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp CCAGTTCTCACACACCGTCCTCGGACACACACAGAGTaGCTGTACGGCCTGCATTCAGTCCCATCCGTAACC +
Preference number: 6 (lower is better)
Translates to: PVLTHRPRTHTE*LYGLHSVPSVT
Trigger: GGTTACGGATGGGACTGAATGCAGGCCGTACAGCAACTCTGTGTGTGTCCGAGGACGGTGTGTGAGAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp CCTCTTCCCTGTGCAGTAGCGGCCACTGTTTCGAGGTaGAGGGTTATTACAATGGCGGTAGGCAAACTGCAC +
Preference number: 6 (lower is better)
Translates to: PLPCAVAATVSR*RVITMAVGKLH
Trigger: GTGCAGTTTGCCTACCGCCATTGTAATAACCCTGCACCTCGAAACAGTGGCCGCTACTGCACAGGGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp CCGTCACATCCAGTTCTCACACACCGTCCTCGGACACACACAGAGTaGCTGTACGGCCTGCATTCAGTCCCATCCGTAACCTTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: PSHPVLTHRPRTHTE*LYGLHSVPSVTFGE
Trigger: TTCTCCAAAGGTTACGGATGGGACTGAATGCAGGCCGTACAGCAACTCTGTGTGTGTCCGAGGACGGTGTGTGAGAACTGGATGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp TGTGCCCTTAGCTCTGCAGGTAAGCTTGCACACATCTaGCGGCAGGACACCTGCATATTTGGGAACCCATTC +
Preference number: 6 (lower is better)
Translates to: CALSSAGKLAHI*RQDTCIFGNPF
Trigger: GAATGGGTTCCCAAATATGCAGGTGTCCTGCCGGCAGATGTGTGCAAGCTTACCTGCAGAGCTAAGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp TGTGGTTCTCAATGCTTGCATGACTGTACAGCCTGTTaGCGATGGAGGCCAGGGTCAGCAGGTAATGCTGCA +
Preference number: 6 (lower is better)
Translates to: CGSQCLHDCTAC*RWRPGSAGNAA
Trigger: TGCAGCATTACCTGCTGACCCTGGCCTCCATCGCCAACAGGCTGTACAGTCATGCAAGCATTGAGAACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp CATTTGCAAAAGTTCTTGAGGGTCGTGGCCGCATTCTaGCTCACCTCCAGACTCGTGTCCTTGTCCGTCAGC +
Preference number: 6 (lower is better)
Translates to: HLQKFLRVVAAF*LTSRLVSLSVS
Trigger: GCTGACGGACAAGGACACGAGTCTGGAGGTGAGCAAGAATGCGGCCACGACCCTCAAGAACTTTTGCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp TCATCCCCTAGCTGGTTATGTTGGTGCTGCCATTTGCAAAAGTTCTaGAGGGTCGTGGCCGCATTCTTGCTCACCTCCAGACTCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SSPSWLCWCCHLQKF*RVVAAFLLTSRLVS
Trigger: GGACACGAGTCTGGAGGTGAGCAAGAATGCGGCCACGACCCTCAAGAACTTTTGCAAATGGCAGCACCAACATAACCAGCTAGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp GCTGGTTATGTTGGTGCTGCCATTTGCAAAAGTTCTTaGGGGTCGTGGCCGCATTCTTGCTCACCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: AGYVGAAICKSS*GSWPHSCSPPD
Trigger: GTCTGGAGGTGAGCAAGAATGCGGCCACGACCCTCAAGAACTTTTGCAAATGGCAGCACCAACATAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp TCATCCAGGAATTCTGTGATGGTGGCTGACGTGCATTaGGACCAGGGCTTGGATGCATCGATGCTGGTAAGG +
Preference number: 6 (lower is better)
Translates to: SSRNSVMVADVH*DQGLDASMLVR
Trigger: CCTTACCAGCATCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp ACCATGACCATCATCCAGGAATTCTGTGATGGTGGCTaGCGTGCATTTGGACCAGGGCTTGGATGCATCGAT +
Preference number: 6 (lower is better)
Translates to: TMTIIQEFCDGG*RAFGPGLGCID
Trigger: ATCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGATGGTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp GTCACCCACTGCAGCTGTGTAGAGTGTGGTCCCACCTaGTTGCTGCCATGGCTGATGACAGAGTTTACTTTT +
Preference number: 6 (lower is better)
Translates to: VTHCSCVECGPT*LLPWLMTEFTF
Trigger: AAAAGTAAACTCTGTCATCAGCCATGGCAGCAACAAGGTGGGACCACACTCTACACAGCTGCAGTGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp GCAAACAATTACCATGACCATCATCCAGGAATTCTGTaGTGGTGGCTGACGTGCATTTGGACCAGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: ANNYHDHHPGIL*WWLTCIWTRAW
Trigger: CCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGATGATGGTCATGGTAATTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp TTCACACTGCTCATGGCGAAAAGATTTACCATTGGGTaGGCAGGGTGTAACACTGCAGGAACGGTATATGGC +
Preference number: 6 (lower is better)
Translates to: FTLLMAKRFTIG*AGCNTAGTVYG
Trigger: GCCATATACCGTTCCTGCAGTGTTACACCCTGCCCACCCAATGGTAAATCTTTTCGCCATGAGCAGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp TCTGTGATGGTGGCTGACGTGCATTTGGACCAGGGCTaGGATGCATCGATGCTGGTAAGGATTGAAGACATT +
Preference number: 6 (lower is better)
Translates to: SVMVADVHLDQG*DASMLVRIEDI
Trigger: AATGTCTTCAATCCTTACCAGCATCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp TTGGCTTCACACTGCTCATGGCGAAAAGATTTACCATaGGGTGGGCAGGGTGTAACACTGCAGGAACGGTAT +
Preference number: 6 (lower is better)
Translates to: LASHCSWRKDLP*GGQGVTLQERY
Trigger: ATACCGTTCCTGCAGTGTTACACCCTGCCCACCCAATGGTAAATCTTTTCGCCATGAGCAGTGTGAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp TCCAGGAATTCTGTGATGGTGGCTGACGTGCATTTGGACCAGGGCTaGGATGCATCGATGCTGGTAAGGATTGAAGACATTAAACGCTTG +
Preference number: 6 (lower is better)
Translates to: SRNSVMVADVHLDQG*DASMLVRIEDIKRL
Trigger: CAAGCGTTTAATGTCTTCAATCCTTACCAGCATCGATGCATCCAAGCCCTGGTCCAAATGCACGTCAGCCACCATCACAGAATTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp AAAGGCCAAGTAGATGCCCAATTTCATGAGCCACAGTaGAGGCTGCATGGAGGCCATCATCTTCAATCACTG +
Preference number: 6 (lower is better)
Translates to: KGQVDAQFHEPQ*RLHGGHHLQSL
Trigger: CAGTGATTGAAGATGATGGCCTCCATGCAGCCTTCACTGTGGCTCATGAAATTGGGCATCTACTTGGCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CCA 72 bp GTCTGGTCTTTGGCTTTGAACTGTCGGACTTTTATGTaGGTTGCTCCTTCAGGGATCCTCACAACGTCAGTA +
Preference number: 6 (lower is better)
Translates to: VWSLALNCRTFM*VAPSGILTTSV
Trigger: TACTGACGTTGTGAGGATCCCTGAAGGAGCAACCCACATAAAAGTCCGACAGTTCAAAGCCAAAGACCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp CTGCAGGTAAGCTTGCACACATCTGCCGGCAGGACACCTGCATATTaGGGAACCCATTCTACAAATGTTTTGACTCCTTTTGCATCAGAC +
Preference number: 6 (lower is better)
Translates to: LQVSLHTSAGRTPAY*GTHSTNVLTPFASD
Trigger: GTCTGATGCAAAAGGAGTCAAAACATTTGTAGAATGGGTTCCCAAATATGCAGGTGTCCTGCCGGCAGATGTGTGCAAGCTTACCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS GCA 72 bp GTCTTTGGCTTTGAACTGTCGGACTTTTATGTGGGTTaGTCCTTCAGGGATCCTCACAACGTCAGTATAACC +
Preference number: 6 (lower is better)
Translates to: VFGFELSDFYVG*SFRDPHNVSIT
Trigger: GGTTATACTGACGTTGTGAGGATCCCTGAAGGAGCAACCCACATAAAAGTCCGACAGTTCAAAGCCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp AGCTTGCACACATCTGCCGGCAGGACACCTGCATATTaGGGAACCCATTCTACAAATGTTTTGACTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SLHTSAGRTPAY*GTHSTNVLTPF
Trigger: AAAAGGAGTCAAAACATTTGTAGAATGGGTTCCCAAATATGCAGGTGTCCTGCCGGCAGATGTGTGCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp GGCTTGGATGCATCGATGCTGGTAAGGATTGAAGACATTAAACGCTaGTCTTCTGTAGTACCGAAGTTCTCTTCACAGAATTTGGAATCG +
Preference number: 6 (lower is better)
Translates to: GLDASMLVRIEDIKR*SSVVPKFSSQNLES
Trigger: CGATTCCAAATTCTGTGAAGAGAACTTCGGTACTACAGAAGACAAGCGTTTAATGTCTTCAATCCTTACCAGCATCGATGCATCCAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 90 bp GTACCATTGATGTCGATGATGGTCTCTGAAGTGGAAATCATGTACTaGCCATTGATAAGGTACTCGCCAGTTTTCTTCTTCAGGGCTAAG +
Preference number: 6 (lower is better)
Translates to: VPLMSMMVSEVEIMY*PLIRYSPVFFFRAK
Trigger: CTTAGCCCTGAAGAAGAAAACTGGCGAGTACCTTATCAATGGCAAGTACATGATTTCCACTTCAGAGACCATCATCGACATCAATGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp ATGATGGTCTCTGAAGTGGAAATCATGTACTTGCCATaGATAAGGTACTCGCCAGTTTTCTTCTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: MMVSEVEIMYLP*IRYSPVFFFRA
Trigger: AGCCCTGAAGAAGAAAACTGGCGAGTACCTTATCAATGGCAAGTACATGATTTCCACTTCAGAGACCATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS TCA 72 bp GTTCATGACGGTACCATTGATGTCGATGATGGTCTCTaGAGTGGAAATCATGTACTTGCCATTGATAAGGTA +
Preference number: 6 (lower is better)
Translates to: VHDGTIDVDDGL*SGNHVLAIDKV
Trigger: TACCTTATCAATGGCAAGTACATGATTTCCACTTCAGAGACCATCATCGACATCAATGGTACCGTCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp GCATCGATGCTGGTAAGGATTGAAGACATTAAACGCTaGTCTTCTGTAGTACCGAAGTTCTCTTCACAGAAT +
Preference number: 6 (lower is better)
Translates to: ASMLVRIEDIKR*SSVVPKFSSQN
Trigger: ATTCTGTGAAGAGAACTTCGGTACTACAGAAGACAAGCGTTTAATGTCTTCAATCCTTACCAGCATCGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7
CDS CAA 72 bp ATGTCGATGATGGTCTCTGAAGTGGAAATCATGTACTaGCCATTGATAAGGTACTCGCCAGTTTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: MSMMVSEVEIMY*PLIRYSPVFFF
Trigger: GAAGAAGAAAACTGGCGAGTACCTTATCAATGGCAAGTACATGATTTCCACTTCAGAGACCATCATCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023611.7