Pregenerated sensors for ADAMTS20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022449Ensembl transcript IDs: ENSMUST00000035342.11, ENSMUST00000155907.2
Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTaGGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCC | + |
Preference number: 1 (lower is better) Translates to: HPKKGLNMEVSGSQG*ERSTDACVFTEQSP Trigger: GGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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3UTR CCA 90 bp | TGGATGCTTCAAGCTTATCCACTCCCTCACAGGAAAATAGCACCATaGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACTG | + |
Preference number: 1 (lower is better) Translates to: WMLQAYPLPHRKIAP*SSEAKPPDPGPQVL Trigger: CAGTACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATAAGCTTGAAGCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 90 bp | CCACGCTGGGTAAGTTTAGAACTGCAGAGTGTTCAAAATACCAGGTaGAAGCCCCTGTGGATGCCTAACTCCTACAGAACATGGCCATGC | + |
Preference number: 1 (lower is better) Translates to: PRWVSLELQSVQNTR*KPLWMPNSYRTWPC Trigger: GCATGGCCATGTTCTGTAGGAGTTAGGCATCCACAGGGGCTTCCACCTGGTATTTTGAACACTCTGCAGTTCTAAACTTACCCAGCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 90 bp | TCGTGCAGAGGACATAATAGGCATCCGGGTTTCTCAGTTACGGCATaGTCTATGCACACACATCTCTGGAATACAGGGTCAGATATTCCA | + |
Preference number: 1 (lower is better) Translates to: SCRGHNRHPGFSVTA*SMHTHLWNTGSDIP Trigger: TGGAATATCTGACCCTGTATTCCAGAGATGTGTGTGCATAGACCATGCCGTAACTGAGAAACCCGGATGCCTATTATGTCCTCTGCACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR GCA 90 bp | GCACCAAGGAGAGGGGCCATTCGTTCCAGCATAAGGTTTGTCAGTTaGTTAAAACATTTAGGTACTGACACAAGGGATAATAATACAGCA | + |
Preference number: 1 (lower is better) Translates to: APRRGAIRSSIRFVS*LKHLGTDTRDNNTA Trigger: TGCTGTATTATTATCCCTTGTGTCAGTACCTAAATGTTTTAAGCAACTGACAAACCTTATGCTGGAACGAATGGCCCCTCTCCTTGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR TCA 90 bp | AAGGAACAAATGACTTCACTGAGTACCAGTAAGGCTTATGGCATATaGAAACAGCCAGCACACGTATCCCTGATGAAAATCTTAGCTCAG | + |
Preference number: 1 (lower is better) Translates to: KEQMTSLSTSKAYGI*KQPAHVSLMKILAQ Trigger: CTGAGCTAAGATTTTCATCAGGGATACGTGTGCTGGCTGTTTTCATATGCCATAAGCCTTACTGGTACTCAGTGAAGTCATTTGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 90 bp | GTCAGATATTCCAGTGCAGTACATAGACAAATGCATATACCACGCTaGGTAAGTTTAGAACTGCAGAGTGTTCAAAATACCAGGTGGAAG | + |
Preference number: 1 (lower is better) Translates to: VRYSSAVHRQMHIPR*VSLELQSVQNTRWK Trigger: CTTCCACCTGGTATTTTGAACACTCTGCAGTTCTAAACTTACCCAGCGTGGTATATGCATTTGTCTATGTACTGCACTGGAATATCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR GCA 90 bp | CACACCAGGACAGTTGATGGTCAGCTTTCAGAAGCAGTAATCAGATaGAAGATAGTTATGAATTTTTCCACTTACAAAGAGGAAATTCAA | + |
Preference number: 1 (lower is better) Translates to: HTRTVDGQLSEAVIR*KIVMNFSTYKEEIQ Trigger: TTGAATTTCCTCTTTGTAAGTGGAAAAATTCATAACTATCTTGCATCTGATTACTGCTTCTGAAAGCTGACCATCAACTGTCCTGGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTAGGTGGAAGCCCCTGTaGATGCCTAACTCCTACAGA | + |
Preference number: 2 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRRWKPL*MPNSYR Trigger: TCTGTAGGAGTTAGGCATCCACAGGGGCTTCCACCT...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR TCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAACACACCAGGACAGTTaGTGGTCAGCTTTCAGAAGC | + |
Preference number: 2 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPTHQDS*WSAFRS Trigger: GCTTCTGAAAGCTGACCATCAACTGTCCTGGTGTGT...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR TCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTCAGCATCATCACAGTaGGGTATTGCAGCACCTATC | + |
Preference number: 2 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRSASSQ*GIAAPI Trigger: GATAGGTGCTGCAATACCTCACTGTGATGATGCTGA...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR TCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACATTGTGCACAAATCTaGTTAATTGGAGTGAAGGTC | + |
Preference number: 2 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVHCAQI*LIGVKV Trigger: GACCTTCACTCCAATTAATCAGATTTGTGCACAATG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACCACACGGTGGAAAATaGATATTCATAGTAAATTAC | + |
Preference number: 2 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVPHGGK*IFIVNY Trigger: GTAATTTACTATGAATATCCATTTTCCACCGTGTGG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGATGCACACACATCTCTaGAATACAGGGTCAGATATT | + |
Preference number: 2 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWMHTHL*NTGSDI Trigger: AATATCTGACCCTGTATTCCAGAGATGTGTGTGCAT...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAAACAAATCTGATTAATTaGAGTGAAGGTCAGAGGTGT | + |
Preference number: 2 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKTNLIN*SEGQRC Trigger: ACACCTCTGACCTTCACTCCAATTAATCAGATTTGT...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CCA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATAGTACGTCCACACGGTaGAAAATGGATATTCATAGT | + |
Preference number: 2 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNSTSTR*KMDIHS Trigger: ACTATGAATATCCATTTTCCACCGTGTGGACGTACT...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | CAAGCTTATCCACTCCCTCACAGGAAAATAGCACCATaGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCC | + |
Preference number: 3 (lower is better) Translates to: QAYPLPHRKIAP*SSEAKPPDPGP Trigger: GGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATAAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | GGTATTGCAGCACCTATCAGGAAGCGGAGAGGCAGGTaGATGCTTCAAGCTTATCCACTCCCTCACAGGAAA | + |
Preference number: 3 (lower is better) Translates to: GIAAPIRKRRGR*MLQAYPLPHRK Trigger: TTTCCTGTGAGGGAGTGGATAAGCTTGAAGCATCCACCTGCCTCTCCGCTTCCTGATAGGTGCTGCAATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR TCA 72 bp | TGGTCTGAAACCCCAATGAGCACCCAAAGAAAGGTTTaGATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGA | + |
Preference number: 3 (lower is better) Translates to: WSETPMSTQRKV*IWKSREARGER Trigger: TCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGCTCATTGGGGTTTCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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3UTR TCA 72 bp | ATCCCTGATGAAAATCTTAGCTCAGCATCATCACAGTaGGGTATTGCAGCACCTATCAGGAAGCGGAGAGGC | + |
Preference number: 3 (lower is better) Translates to: IPDENLSSASSQ*GIAAPIRKRRG Trigger: GCCTCTCCGCTTCCTGATAGGTGCTGCAATACCTCACTGTGATGATGCTGAGCTAAGATTTTCATCAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | AAATGGCCTGATAGTAAATATTTCCACCATTGTGGCTaGCAGAGTCAGCTCAACCGCTGTGGTGTAGCATCC | + |
Preference number: 3 (lower is better) Translates to: KWPDSKYFHHCG*QSQLNRCGVAS Trigger: GGATGCTACACCACAGCGGTTGAGCTGACTCTGCCAGCCACAATGGTGGAAATATTTACTATCAGGCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CAA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAACACACCAGGACAGTaGATGGTCAGCTTTCAGAAG | + |
Preference number: 3 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWNTPGQ*MVSFQK Trigger: CTTCTGAAAGCTGACCATCAACTGTCCTGGTGTGTT...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | GTAAGTTTAGAACTGCAGAGTGTTCAAAATACCAGGTaGAAGCCCCTGTGGATGCCTAACTCCTACAGAACA | + |
Preference number: 3 (lower is better) Translates to: VSLELQSVQNTR*KPLWMPNSYRT Trigger: TGTTCTGTAGGAGTTAGGCATCCACAGGGGCTTCCACCTGGTATTTTGAACACTCTGCAGTTCTAAACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR-3UTR CAA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATCATCACAGTGAGGTATaGCAGCACCTATCAGGAAGC | + |
Preference number: 3 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNHHSEV*QHLSGS Trigger: GCTTCCTGATAGGTGCTGCAATACCTCACTGTGATG...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | AAGATTACTCGGTTAGCTGCGTTTGAAACAGTTGTGTaGTACACACTGAAGATCTCTGCAATCCTCCCTTAC | + |
Preference number: 3 (lower is better) Translates to: KITRLAAFETVV*YTLKISAILPY Trigger: GTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTTTCAAACGCAGCTAACCGAGTAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR GCA 72 bp | AGAGGGGCCATTCGTTCCAGCATAAGGTTTGTCAGTTaGTTAAAACATTTAGGTACTGACACAAGGGATAAT | + |
Preference number: 3 (lower is better) Translates to: RGAIRSSIRFVS*LKHLGTDTRDN Trigger: ATTATCCCTTGTGTCAGTACCTAAATGTTTTAAGCAACTGACAAACCTTATGCTGGAACGAATGGCCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | TCCAGTGCAGTACATAGACAAATGCATATACCACGCTaGGTAAGTTTAGAACTGCAGAGTGTTCAAAATACC | + |
Preference number: 3 (lower is better) Translates to: SSAVHRQMHIPR*VSLELQSVQNT Trigger: GGTATTTTGAACACTCTGCAGTTCTAAACTTACCCAGCGTGGTATATGCATTTGTCTATGTACTGCACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | AGTGGAATGTTAACATTGTGCACAAATCTGATTAATTaGAGTGAAGGTCAGAGGTGTAATGAAAGAAAGCAT | + |
Preference number: 3 (lower is better) Translates to: SGMLTLCTNLIN*SEGQRCNERKH Trigger: ATGCTTTCTTTCATTACACCTCTGACCTTCACTCCAATTAATCAGATTTGTGCACAATGTTAACATTCCACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR TCA 72 bp | TATATACACATATATTCCCTTAGTTTTCTAACTGGATaGGCAGGGTCTATTGACATTCATGTCAGTCATGAA | + |
Preference number: 3 (lower is better) Translates to: YIHIYSLSFLTG*AGSIDIHVSHE Trigger: TTCATGACTGACATGAATGTCAATAGACCCTGCTCATCCAGTTAGAAAACTAAGGGAATATATGTGTATATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CCA 72 bp | AGTAATATATTCCTAACCCACAGTACGTCCACACGGTaGAAAATGGATATTCATAGTAAATTACTACATAAG | + |
Preference number: 3 (lower is better) Translates to: SNIFLTHSTSTR*KMDIHSKLLHK Trigger: CTTATGTAGTAATTTACTATGAATATCCATTTTCCACCGTGTGGACGTACTGTGGGTTAGGAATATATTACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCGCTCATGGGCGATGGTaGAGGCGGCGCTCAGCCCGT | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQAAHGRW*RRRSAR Trigger: ACGGGCTGAGCGCCGCCTTCACCATCGCCCATGAGC...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACCACCGGCGCAGCTTCTaGAGCATGCTCCCCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: GSLGKPGVREEHRRLCFHHRRSF*SMLPKG Trigger: GCCCTTGGGGAGCATGCTCCAGAAGCTGCGCCGGTG...GTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCACTCGGCTGGGAGGCTTaGGCTGGTCACCACAGTACT | + |
Preference number: 4 (lower is better) Translates to: LGKPGVREEHRRLCFHRALGWEA*AGHHST Trigger: AGTACTGTGGTGACCAGCTCAAGCCTCCCAGCCGAG...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAGACCAGTCCCCTGCTTaGCACTCTCCACAAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: LGKPGVREEHRRLCFHRADQSPA*HSPQGL Trigger: CAGCCCTTGTGGAGAGTGGCAAGCAGGGGACTGGTC...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCGCTGTAGGGTCCCCATaGTCCCCACTCGCCATCCAC | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQAAVGSP*SPLAIH Trigger: GTGGATGGCGAGTGGGGACCATGGGGACCCTACAGC...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCCCTGTGGGCATCTaGCAGCGCTGTAGCAGTCCC | + |
Preference number: 4 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQAPVGI*QRCSSP Trigger: GGGACTGCTACAGCGCTGCCAGATGCCCACAGGGGC...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTGGAGCCACAGTGCCTTaGCTCTGGGGGCTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: IWKSREARGERGAPTPVFGATVP*LWGLGG Trigger: TCCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCC...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATGGAACGTGGCTTGGCTaGTCAGAGGAGCTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: REARGERGAPTPVFSQSNGTWLG*SEELGA Trigger: AGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCC...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAACACACAGCCCACGGTaGCAGTGCATCCCGGGACCA | + |
Preference number: 4 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQTHSPR*QCIPGP Trigger: TGGTCCCGGGATGCACTGCCACCGTGGGCTGTGTGT...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGGGTCTCCATGTCCCTaGTCACACACAGCCCACGGT | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRGSPCP*SHTAHG Trigger: ACCGTGGGCTGTGTGTGACCAGGGACATGGAGACCC...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACTTCCCAGGACCCAGTaGGAAGGAGCGAGATCGGGC | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGLPRTQ*EGARSG Trigger: GCCCGATCTCGCTCCTTCTCACTGGGTCCTGGGAAG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCAGGGCCAAACATaGGCTCACACTGCCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: LGKPGVREEHRRLCFHRAIQGQT*AHTACS Trigger: GGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGAT...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCGGGTCTTCACTCAGCTaGCACCAAACCTGTCGCTGC | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQAGSSLS*HQTCRC Trigger: GCAGCGACAGGTTTGGTGTCAGCTGAGTGAAGACCC...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTCCACTGGTTTCCTCTaGTTGACAGCTGGGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSSTGFL*LTAGPP Trigger: AGGGGGCCCAGCTGTCAATCAGAGGAAACCAGTGGA...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACGGGGCAGGCGTGCAGGTaGCACTGCATCATGCTAGGT | + |
Preference number: 4 (lower is better) Translates to: RLCFHRAIPLHGPSKPWTGQACR*HCIMLG Trigger: ACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCC...CGTCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCACATAACGGGCCTGACTaGCTCTTCCACAGGACACAG | + |
Preference number: 4 (lower is better) Translates to: LGKPGVREEHRRLCFHRAHNGPD*LFHRTQ Trigger: CTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGTTATG...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCCAGTGCCTCTCAGCCTaGAGTACACCTCCCTCTGCT | + |
Preference number: 4 (lower is better) Translates to: EEHRRLCFHRAIPLHGPSQCLSA*STPPSA Trigger: AGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTG...GGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCACGTGTCCAAGCTCATaGGCGATGGTGAAGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFTCPSS*AMVKAA Trigger: CGCCGCCTTCACCATCGCCCATGAGCTTGGACACGT...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCGTCCTCCACAGAGACTaGAGACAGCAGTGTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: EEHRRLCFHRAIPLHGPSVLHRD*RQQCGP Trigger: AGGACCACACTGCTGTCTTCAGTCTCTGTGGAGGAC...GGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAAATGGAGCAGCTCCGTaGAGGATCACACAGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQNGAAP*RITQGA Trigger: GGCACCCTGTGTGATCCTTCACGGAGCTGCTCCATT...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGACGTAATGGGCACTGTTaGAGACACCTGCCAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRRNGHC*RHLPGS Trigger: AGACCCTGGCAGGTGTCTTCAACAGTGCCCATTACG...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTCTGGTTTCCTCTGATTaGCAGCTGGGCCCCCTGATC | + |
Preference number: 4 (lower is better) Translates to: IWKSREARGERGAPTPVFLVSSD*QLGPLI Trigger: GATCAGGGGGCCCAGCTGTCAATCAGAGGAAACCAG...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGATCCACTGGTACCTCATaGAGTCCTGACGCCAGCACT | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRSTGTS*SPDAST Trigger: AGTGCTGGCGTCAGGACTGCATGAGGTACCAGTGGA...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCACACCTGCCAGGGTCTaGCACGAAGAGTTGTCACCA | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSTPARV*HEELSP Trigger: TGGTGACAACTCTTCGTGCCAGACCCTGGCAGGTGT...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAACAGCTGCCATGGCATaGCTCTCGGCTGGGAGGCTT | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGTAAMA*LSAGRL Trigger: AAGCCTCCCAGCCGAGAGCCATGCCATGGCAGCTGT...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACACCGGCGCAGCTTCTaGAGCATGCTCCCCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPHRRSF*SMLPKG Trigger: GCCCTTGGGGAGCATGCTCCAGAAGCTGCGCCGGTG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | GGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACTCTGTGATATGCTTCTaGCTGCATGCTGACCAGGTC | + |
Preference number: 4 (lower is better) Translates to: GSLGKPGVREEHRRLCFHSVICF*LHADQV Trigger: GACCTGGTCAGCATGCAGTCAGAAGCATATCACAGA...GTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGCCACACTGGGATaGGCAGTCGCTTTTCCCAAT | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQALATLG*AVAFPN Trigger: ATTGGGAAAAGCGACTGCTCATCCCAGTGTGGCCAA...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAAAGTTGATGCTGAACTaGCCCTGTGGGCATCTGGCA | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRKLMLN*PCGHLA Trigger: TGCCAGATGCCCACAGGGGCAGTTCAGCATCAACTT...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAACGTGTCCAAGCTCATaGGCGATGGTGAAGGCGGCG | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVTCPSS*AMVKAA Trigger: CGCCGCCTTCACCATCGCCCATGAGCTTGGACACGT...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTACACACAGCCCACGGTaGCAGTGCATCCCGGGACCA | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRTHSPR*QCIPGP Trigger: TGGTCCCGGGATGCACTGCCACCGTGGGCTGTGTGT...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCAAAACACAGCTGCCATaGCATGGCTCTCGGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: RFEYGSLGKPGVREEHRRKTQLP*HGSRLG Trigger: TCCCAGCCGAGAGCCATGCCATGGCAGCTGTGTTTT...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCTTTCTGCTGGGAACGTaGCTTGGCTGCTCAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFFLLGT*LGCSEE Trigger: CTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAA...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGCCGTCTTGGGACCTGTaGATGATGACAGAGGCATAC | + |
Preference number: 4 (lower is better) Translates to: GERGAPTPVFSQSNPPSRPSWDL*MMTEAY Trigger: GTATGCCTCTGTCATCATCCACAGGTCCCAAGACGG...CCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCCCCCATCATTTGCTTTaGATGTCCCCATCAGTCCTC | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSPHHLL*MSPSVL Trigger: GAGGACTGATGGGGACATTCAAAGCAAATGATGGGG...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTGCTCATGGGCGATGGTaGAGGCGGCGCTCAGCCCGT | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCAHGRW*RRRSAR Trigger: ACGGGCTGAGCGCCGCCTTCACCATCGCCCATGAGC...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACGGTAGGGACACACTTGTaGTCCAGGGCCAAACATGAG | + |
Preference number: 4 (lower is better) Translates to: RLCFHRAIPLHGPSKPWTVGTHL*SRAKHE Trigger: CTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTAC...CGTCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATTTGGAGTTTAACACGTaGTCACAGCCAGCTTGCCGA | + |
Preference number: 4 (lower is better) Translates to: REARGERGAPTPVFSQSNLEFNT*SQPACR Trigger: TCGGCAAGCTGGCTGTGATCACGTGTTAAACTCCAA...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACTCGGCTGGGAGGCTTaGGCTGGTCACCACAGTACT | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPLGWEA*AGHHST Trigger: AGTACTGTGGTGACCAGCTCAAGCCTCCCAGCCGAG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTTTACCACAGGAAGCTaGGCACGACTTCCATGGTCC | + |
Preference number: 4 (lower is better) Translates to: HRRLCFHRAIPLHGPSKPFTTGS*ARLPWS Trigger: GGACCATGGAAGTCGTGCTCAGCTTCCTGTGGTAAA...AGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCTTCTGTGGGGAAGTaGACCCACAGTTACCTGCAC | + |
Preference number: 4 (lower is better) Translates to: IWKSREARGERGAPTPVFSSVGK*THSYLH Trigger: GTGCAGGTAACTGTGGGTTCACTTCCCCACAGAAGA...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCTTGTCAAAACACAGCTaGCATGGCATGGCTCTCGGC | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFLSKHS*HGMALG Trigger: GCCGAGAGCCATGCCATGGCAGCTGTGTTTTGACAA...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGCACCACAGGTTTGTGTaGATTCTCCCCAGTCCCCAT | + |
Preference number: 4 (lower is better) Translates to: FEYGSLGKPGVREEHRRLHHRFV*ILPSPH Trigger: ATGGGGACTGGGGAGAATGCACACAAACCTGTGGTG...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCGGTTCTCCAGCTGCATaGCTGAGCAATGGATCTTCA | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQAGSPAA*LSNGSS Trigger: TGAAGATCCATTGCTCAGGCATGCAGCTGGAGAACC...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGCTAGGGTTCTCCAGCTaGATGCCTGAGCAATGGATC | + |
Preference number: 4 (lower is better) Translates to: FEYGSLGKPGVREEHRRLLGFSS*MPEQWI Trigger: GATCCATTGCTCAGGCATGCAGCTGGAGAACCCTAG...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGGGTCTCCATGTCCCTaGTCACACACAGCCCACGGT | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPGSPCP*SHTAHG Trigger: ACCGTGGGCTGTGTGTGACCAGGGACATGGAGACCC...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAATGCCGACAGAGGCCCTaGACACAGATGTCGTTAGTT | + |
Preference number: 4 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQCRQRP*TQMSLV Trigger: AACTAACGACATCTGTGTCCAGGGCCTCTGTCGGCA...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCAGAAACCATCCCTCATaGGGTCTTCACTCAGCTGAC | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQARNHPS*GLHSAD Trigger: GTCAGCTGAGTGAAGACCCCATGAGGGATGGTTTCT...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGAGGCCGGGTGGATaGATCACACATGTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: RFEYGSLGKPGVREEHRRLRPGG*ITHVFR Trigger: TCTGAAGACATGTGTGATCCATCCACCCGGCCTCAG...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTGTGTTTCTGGAGCTCTaGGAGGGCAAAGCAGTTTTC | + |
Preference number: 4 (lower is better) Translates to: YGSLGKPGVREEHRRLCFVFLEL*EGKAVF Trigger: GAAAACTGCTTTGCCCTCTCAGAGCTCCAGAAACAC...AAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAGTTCGCCTTCCAATCTaGACACCGCTTCCTCTTCGA | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGVRLPI*TPLPLR Trigger: TCGAAGAGGAAGCGGTGTTCAGATTGGAAGGCGAAC...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTAATGGAGCAGCTCCGTaGAGGATCACACAGGGTGCC | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRNGAAP*RITQGA Trigger: GGCACCCTGTGTGATCCTTCACGGAGCTGCTCCATT...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAATCCAGGGCCAAACATaGGCTCACACTGCCTGTTCC | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVIQGQT*AHTACS Trigger: GGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGAT...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACGTAATGGGCACTGTTaGAGACACCTGCCAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVRNGHC*RHLPGS Trigger: AGACCCTGGCAGGTGTCTTCAACAGTGCCCATTACG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAGCACCCTGGATGTTaGTCTCTTTCTTCGCCATAC | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFQHPGC*SLSSPY Trigger: GTATGGCGAAGAAAGAGATCAACATCCAGGGTGCTG...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGATTCCTTTTCCACATGTaGCAGGACACTCACTCCACT | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRFLFHM*QDTHST Trigger: AGTGGAGTGAGTGTCCTGTCACATGTGGAAAAGGAA...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGGGTCTTCACTCAGCTaGCACCAAACCTGTCGCTGC | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPGSSLS*HQTCRC Trigger: GCAGCGACAGGTTTGGTGTCAGCTGAGTGAAGACCC...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTAACAGCACGCATCTaGTATCCATGTCCACAGGTG | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQALTARI*YPCPQV Trigger: CACCTGTGGACATGGATATCAGATGCGTGCTGTTAA...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGACTCTCCACAAGGGCTaGAGCAGAGAGACACCGCAG | + |
Preference number: 4 (lower is better) Translates to: APKERFEYGSLGKPGVRETLHKG*SRETPQ Trigger: CTGCGGTGTCTCTCTGCTTCAGCCCTTGTGGAGAGT...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGGGAGCCACAGTGCCTTaGCTCTGGGGGCTTGGAGGA | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWGATVP*LWGLGG Trigger: TCCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCC...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCTTTTCCCAATGATGTaGCACCTGAGTTCACAGTCC | + |
Preference number: 4 (lower is better) Translates to: REARGERGAPTPVFSQSNLFPMM*HLSSQS Trigger: GGACTGTGAACTCAGGTGGCACATCATTGGGAAAAG...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACATAACGGGCCTGACTaGCTCTTCCACAGGACACAG | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVHNGPD*LFHRTQ Trigger: CTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGTTATG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACTCCAGTCGTGTTTCTaGAGCTCTGAGAGGGCAAAG | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGLQSCF*SSERAK Trigger: CTTTGCCCTCTCAGAGCTCCAGAAACACGACTGGAG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGCTGCTCAGAGGAGCTaGGAGCTCGGCTGTATAAGG | + |
Preference number: 4 (lower is better) Translates to: APKERFEYGSLGKPGVREAAQRS*ELGCIR Trigger: CCTTATACAGCCGAGCTCCCAGCTCCTCTGAGCAGC...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACTGCATCATGCTAGGTaGCTTGGGCAGTTCACAGCT | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGLHHAR*LGQFTA Trigger: AGCTGTGAACTGCCCAAGCCACCTAGCATGATGCAG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | CCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGGCCCCTGAGGCCGGGTaGATGGATCACACATGTCTT | + |
Preference number: 4 (lower is better) Translates to: PKERFEYGSLGKPGVREEAPEAG*MDHTCL Trigger: AAGACATGTGTGATCCATCCACCCGGCCTCAGGGGC...CTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCTTCCCACTTTCCAAGTaGCTACATGCAGACAGCTTC | + |
Preference number: 4 (lower is better) Translates to: EEHRRLCFHRAIPLHGPSFPLSK*LHADSF Trigger: GAAGCTGTCTGCATGTAGCCACTTGGAAAGTGGGAA...GGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACTTAAACATAAGTCACTaGGCCAACCGTTCTCAGTCC | + |
Preference number: 4 (lower is better) Translates to: GSLGKPGVREEHRRLCFHLNISH*ANRSQS Trigger: GGACTGAGAACGGTTGGCCCAGTGACTTATGTTTAA...GTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTCATCCGGGACATTCTaGCTCTGTTGCCATAAGCAA | + |
Preference number: 4 (lower is better) Translates to: FEYGSLGKPGVREEHRRLSSGTF*LCCHKQ Trigger: TTGCTTATGGCAACAGAGTCAGAATGTCCCGGATGA...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCTCCAGCTGCATGCCTaGGCAATGGATCTTCAATAT | + |
Preference number: 4 (lower is better) Translates to: YGSLGKPGVREEHRRLCFLQLHA*AMDLQY Trigger: ATATTGAAGATCCATTGCTCAGGCATGCAGCTGGAG...AAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCATCGAAATTTCATCCTaGGGCCCACACAGTACCTTC | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFIEISS*GPHSTF Trigger: GAAGGTACTGTGTGGGCCGCAGGATGAAATTTCGAT...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCTCGGAAGTCTCGCTTaGCTTTTGGACATGAATCAG | + |
Preference number: 4 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFLGSLA*LLDMNQ Trigger: CTGATTCATGTCCAAAAGGCAAGCGAGACTTCCGAG...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCAATAGCCAGGCAAGGTaGCAATATACAGTCCTGTCT | + |
Preference number: 4 (lower is better) Translates to: APTPVFSQSNPPSRSFQANSQAR*QYTVLS Trigger: AGACAGGACTGTATATTGGCACCTTGCCTGGCTATT...GGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGGACCAGTCCCCTGCTTaGCACTCTCCACAAGGGCTG | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWDQSPA*HSPQGL Trigger: CAGCCCTTGTGGAGAGTGGCAAGCAGGGGACTGGTC...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTTCCAAGTGGCTACATaGAGACAGCTTCTAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: IWKSREARGERGAPTPVFFQVAT*RQLLRS Trigger: CGACCTTAGAAGCTGTCTGCATGTAGCCACTTGGAA...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCCTGAGCGAGCCACTTTaGTGTGTTGGATATCTTCAT | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSLSEPL*CVGYLH Trigger: ATGAAGATATCCAACACAGCAAAGTGGCTCGCTCAG...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTGCTGTAGGGTCCCCATaGTCCCCACTCGCCATCCAC | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCAVGSP*SPLAIH Trigger: GTGGATGGCGAGTGGGGACCATGGGGACCCTACAGC...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCAGTGGCATCGGTAAGTaGCCACAATTGTGGTCAGAT | + |
Preference number: 4 (lower is better) Translates to: RFEYGSLGKPGVREEHRRSGIGK*PQLWSD Trigger: ATCTGACCACAATTGTGGCCACTTACCGATGCCACT...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | CGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACGGTACTGATCTCCTACTaGGACAGCCTGTCCTTTATG | + |
Preference number: 4 (lower is better) Translates to: RLCFHRAIPLHGPSKPWTVLISY*DSLSFM Trigger: CATAAAGGACAGGCTGTCCCAGTAGGAGATCAGTAC...CGTCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTATCTGTGATATGCTTCTaGCTGCATGCTGACCAGGTC | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVSVICF*LHADQV Trigger: GACCTGGTCAGCATGCAGTCAGAAGCATATCACAGA...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAGGAGAAAGTTCCCTTaGGTGTCAGATAATGCGAGA | + |
Preference number: 4 (lower is better) Translates to: RRLCFHRAIPLHGPSKPWRRKFP*VSDNAR Trigger: TCTCGCATTATCTGACACTCAAGGGAACTTTCTCCT...CCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAACACTGGGACCACTCTaGATAATGCCACCTTGTCAA | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGTLGPL*IMPPCQ Trigger: TTGACAAGGTGGCATTATTCAGAGTGGTCCCAGTGT...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCATTCTCTCCTGGTTTGTaGGTTAATGGAACATTTCTG | + |
Preference number: 4 (lower is better) Translates to: LGKPGVREEHRRLCFHRAFSPGL*VNGTFL Trigger: CAGAAATGTTCCATTAACTCACAAACCAGGAGAGAA...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCATACTCCCCATCATTTaGTTTGAATGTCCCCATCAG | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSILPII*FECPHQ Trigger: CTGATGGGGACATTCAAAGCAAATGATGGGGAGTAT...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACTCCAGTCGTGTTTCTaGAGCTCTGAGAGGGCAAAG | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPLQSCF*SSERAK Trigger: CTTTGCCCTCTCAGAGCTCCAGAAACACGACTGGAG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTGCCGACAGAGGCCCTaGACACAGATGTCGTTAGTT | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRCRQRP*TQMSLV Trigger: AACTAACGACATCTGTGTCCAGGGCCTCTGTCGGCA...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTCGAAAACAGCACCCTaGATGTTGATCTCTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSSKTAP*MLISFF Trigger: GAAGAAAGAGATCAACATCCAGGGTGCTGTTTTCGA...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTACAGCTGCCATGGCATaGCTCTCGGCTGGGAGGCTT | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCTAAMA*LSAGRL Trigger: AAGCCTCCCAGCCGAGAGCCATGCCATGGCAGCTGT...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGGGCCTGTTCTCCACTaGTTTCCTCTGATTGACAGC | + |
Preference number: 4 (lower is better) Translates to: APKERFEYGSLGKPGVREGPVLH*FPLIDS Trigger: GCTGTCAATCAGAGGAAACCAGTGGAGAACAGGCCC...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTGGGCCTGTTCTCCACTaGTTTCCTCTGATTGACAGC | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRGPVLH*FPLIDS Trigger: GCTGTCAATCAGAGGAAACCAGTGGAGAACAGGCCC...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTCTGCATCATGCTAGGTaGCTTGGGCAGTTCACAGCT | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRLHHAR*LGQFTA Trigger: AGCTGTGAACTGCCCAAGCCACCTAGCATGATGCAG...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGGTATGTAATCTTCTGTaGGGAAGTGAACCCACAGTT | + |
Preference number: 4 (lower is better) Translates to: GERGAPTPVFSQSNPPSRVCNLL*GSEPTV Trigger: AACTGTGGGTTCACTTCCCCACAGAAGATTACATAC...CCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAACTTTGGTTCCGTCTTaGGACCTGTGGATGATGACA | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGTLVPS*DLWMMT Trigger: TGTCATCATCCACAGGTCCCAAGACGGAACCAAAGT...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTGTGTTTCTGGAGCTCTaGGAGGGCAAAGCAGTTTTC | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRVFLEL*EGKAVF Trigger: GAAAACTGCTTTGCCCTCTCAGAGCTCCAGAAACAC...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTATCATCCGGGACATTCTaGCTCTGTTGCCATAAGCAA | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVSSGTF*LCCHKQ Trigger: TTGCTTATGGCAACAGAGTCAGAATGTCCCGGATGA...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTACTCTCCACAAGGGCTaGAGCAGAGAGACACCGCAG | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCTLHKG*SRETPQ Trigger: CTGCGGTGTCTCTCTGCTTCAGCCCTTGTGGAGAGT...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCACAGATCACAAATCTTaGTTTTACCCCTCCACCACA | + |
Preference number: 4 (lower is better) Translates to: RFEYGSLGKPGVREEHRRTDHKS*FYPSTT Trigger: TGTGGTGGAGGGGTAAAATCAAGATTTGTGATCTGT...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGGGCAGGCGTGCAGGTaGCACTGCATCATGCTAGGT | + |
Preference number: 4 (lower is better) Translates to: VLASFLPIWDRMSRFMSLGQACR*HCIMLG Trigger: ACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCC...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGGATCTGCAAGCTTTGTaGGTTCGAGGTTTATGCAAA | + |
Preference number: 4 (lower is better) Translates to: FEYGSLGKPGVREEHRRLDLQAL*VRGLCK Trigger: TTTGCATAAACCTCGAACTCACAAAGCTTGCAGATC...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACACCAAACCTGTCGCTaGTTCATTCCTTTTCCACAT | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGHQTCR*FIPFPH Trigger: ATGTGGAAAAGGAATGAAGCAGCGACAGGTTTGGTG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAAGGAACGTGGCTTGGCTaGTCAGAGGAGCTGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKGTWLG*SEELGA Trigger: AGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCC...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGTTAAAACTGATCACTaGTCCTTCCTGTTCACTGTG | + |
Preference number: 4 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQVKTDH*SFLFTV Trigger: CACAGTGAACAGGAAGGACCAGTGATCAGTTTTAAC...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACACACTTGTCTCTCTTaGCCTTGGAGTTTAACACGT | + |
Preference number: 4 (lower is better) Translates to: DACVFTEQSPFTVLPSLGHTCLS*PWSLTR Trigger: ACGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACTTGCCACGGCCCGTATaGATCCCAGGAGAACAGATT | + |
Preference number: 4 (lower is better) Translates to: KERFEYGSLGKPGVREEHLPRPV*IPGEQI Trigger: AATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAA...GTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAAGTGGCATCGGTAAGTaGCCACAATTGTGGTCAGAT | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVSGIGK*PQLWSD Trigger: ATCTGACCACAATTGTGGCCACTTACCGATGCCACT...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAGTACTGATCTCCTACTaGGACAGCCTGTCCTTTATG | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVVLISY*DSLSFM Trigger: CATAAAGGACAGGCTGTCCCAGTAGGAGATCAGTAC...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTAGAAACCATCCCTCATaGGGTCTTCACTCAGCTGAC | + |
Preference number: 4 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRRNHPS*GLHSAD Trigger: GTCAGCTGAGTGAAGACCCCATGAGGGATGGTTTCT...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAACATTGTTTGTAACTTaGAGTTCCTTGCAGGTGGTT | + |
Preference number: 4 (lower is better) Translates to: SLGKPGVREEHRRLCFHRTLFVT*SSLQVV Trigger: AACCACCTGCAAGGAACTCCAAGTTACAAACAATGT...TCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTGTCCTCCACAGAGACTaGAGACAGCAGTGTGGTCCT | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCVLHRD*RQQCGP Trigger: AGGACCACACTGCTGTCTTCAGTCTCTGTGGAGGAC...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTCTCCATTTGATTTTCTaGAACTTCACAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: IWKSREARGERGAPTPVFLHLIF*NFTRLV Trigger: CACAAGCCTTGTGAAGTTTCAGAAAATCAAATGGAG...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | CGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGCCTTCCTGTTCACTGTaGATCACAACTAATTTCACA | + |
Preference number: 4 (lower is better) Translates to: RRLCFHRAIPLHGPSKPWPSCSL*ITTNFT Trigger: TGTGAAATTAGTTGTGATTCACAGTGAACAGGAAGG...CCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTACTGGTTTCCTCTGATTaGCAGCTGGGCCCCCTGATC | + |
Preference number: 4 (lower is better) Translates to: VLASFLPIWDRMSRFMSLLVSSD*QLGPLI Trigger: GATCAGGGGGCCCAGCTGTCAATCAGAGGAAACCAG...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATAGTTGTCTTCACTTTTaGCCAGTGGTAAATATTCTC | + |
Preference number: 4 (lower is better) Translates to: REARGERGAPTPVFSQSNSCLHF*PVVNIL Trigger: GAGAATATTTACCACTGGTCAAAAGTGAAGACAACT...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACTTTTCCCAATGATGTaGCACCTGAGTTCACAGTCC | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPLFPMM*HLSSQS Trigger: GGACTGTGAACTCAGGTGGCACATCATTGGGAAAAG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGCACCACAGGTTTGTGTaGATTCTCCCCAGTCCCCAT | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWHHRFV*ILPSPH Trigger: ATGGGGACTGGGGAGAATGCACACAAACCTGTGGTG...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGAACCGTTCTCAGTCCTaGATGCTACTCTTCTCTCCA | + |
Preference number: 4 (lower is better) Translates to: APKERFEYGSLGKPGVRENRSQS*MLLFSP Trigger: TGGAGAGAAGAGTAGCATGCAGGACTGAGAACGGTT...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTATCTGTAGATCAGATGTaGCTTGTTGTGGTCATCGTC | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVSVDQM*LVVVIV Trigger: GACGATGACCACAACAAGCCACATCTGATCTACAGA...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACACACTTGTCTCTCTTaGCCTTGGAGTTTAACACGT | + |
Preference number: 4 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVHTCLS*PWSLTR Trigger: ACGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCATAGTTGTCATCTTCTaGTCTTCCAGAATAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: RFEYGSLGKPGVREEHRRIVVIF*SSRIAV Trigger: CACAGCTATTCTGGAAGACCAGAAGATGACAACTAT...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGTTGCCACGGCCCGTATaGATCCCAGGAGAACAGATT | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWLPRPV*IPGEQI Trigger: AATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAA...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAAGCTGCTCAGAGGAGCTaGGAGCTCGGCTGTATAAGG | + |
Preference number: 4 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKAAQRS*ELGCIR Trigger: CCTTATACAGCCGAGCTCCCAGCTCCTCTGAGCAGC...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTTTTCTGCTGGGAACGTaGCTTGGCTGCTCAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCFLLGT*LGCSEE Trigger: CTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAA...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | CGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGCACAGAGACTTTCATTaGCTTGTACGTTTTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RRLCFHRAIPLHGPSKPWHRDFH*LVRFAH Trigger: ATGAGCAAAACGTACAAGCCAATGAAAGTCTCTGTG...CCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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3UTR CAA 72 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTaGACTGACTATTTCTGTGAGGTTGAAGGGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVF*TDYFCEVEGLL Trigger: GAGCAGCCCTTCAACCTCACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTGTAGGGACACACTTGTaGTCCAGGGCCAAACATGAG | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCVGTHL*SRAKHE Trigger: CTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTAC...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAAGGAGAAAGTTCCCTTaGGTGTCAGATAATGCGAGA | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPRRKFP*VSDNAR Trigger: TCTCGCATTATCTGACACTCAAGGGAACTTTCTCCT...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGCAGCACCCTGGATGTTaGTCTCTTTCTTCGCCATAC | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWQHPGC*SLSSPY Trigger: GTATGGCGAAGAAAGAGATCAACATCCAGGGTGCTG...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | CACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTGTTCACAGTCCATATTaGACTTTTCAGTCACAAACA | + |
Preference number: 4 (lower is better) Translates to: HRRLCFHRAIPLHGPSKPVHSPY*TFQSQT Trigger: TGTTTGTGACTGAAAAGTGCAATATGGACTGTGAAC...AGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAAATAGCCAGGCAAGGTaGCAATATACAGTCCTGTCT | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPNSQAR*QYTVLS Trigger: AGACAGGACTGTATATTGGCACCTTGCCTGGCTATT...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAACACCTGCCAGGGTCTaGCACGAAGAGTTGTCACCA | + |
Preference number: 4 (lower is better) Translates to: VLASFLPIWDRMSRFMSLTPARV*HEELSP Trigger: TGGTGACAACTCTTCGTGCCAGACCCTGGCAGGTGT...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAAAAAACACAGCTGCCATaGCATGGCTCTCGGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKKTQLP*HGSRLG Trigger: TCCCAGCCGAGAGCCATGCCATGGCAGCTGTGTTTT...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGACTTCCCAGGACCCAGTaGGAAGGAGCGAGATCGGGC | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRLPRTQ*EGARSG Trigger: GCCCGATCTCGCTCCTTCTCACTGGGTCCTGGGAAG...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTTTGGAGTTTAACACGTaGTCACAGCCAGCTTGCCGA | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCLEFNT*SQPACR Trigger: TCGGCAAGCTGGCTGTGATCACGTGTTAAACTCCAA...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGTTAACAGCACGCATCTaGTATCCATGTCCACAGGTG | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWLTARI*YPCPQV Trigger: CACCTGTGGACATGGATATCAGATGCGTGCTGTTAA...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGTGGCCATTGGGAAACTaGCAGATCACAAATCTTGAT | + |
Preference number: 4 (lower is better) Translates to: PKERFEYGSLGKPGVREEWPLGN*QITNLD Trigger: ATCAAGATTTGTGATCTGTCAGTTTCCCAATGGCCA...CTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR GCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGATCGAAATTTCATCCTaGGGCCCACACAGTACCTTC | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWIEISS*GPHSTF Trigger: GAAGGTACTGTGTGGGCCGCAGGATGAAATTTCGAT...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAATTGTCAAAACACAGCTaGCATGGCATGGCTCTCGGC | + |
Preference number: 4 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKLSKHS*HGMALG Trigger: GCCGAGAGCCATGCCATGGCAGCTGTGTTTTGACAA...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | AAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACTCTGTAGATCAGATGTaGCTTGTTGTGGTCATCGTC | + |
Preference number: 4 (lower is better) Translates to: KERFEYGSLGKPGVREEHSVDQM*LVVVIV Trigger: GACGATGACCACAACAAGCCACATCTGATCTACAGA...GTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR TCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACCTTCCTGTTCACTGTaGATCACAACTAATTTCACA | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPPSCSL*ITTNFT Trigger: TGTGAAATTAGTTGTGATTCACAGTGAACAGGAAGG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTTTCCTTTTCCACATGTaGCAGGACACTCACTCCACT | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCFLFHM*QDTHST Trigger: AGTGGAGTGAGTGTCCTGTCACATGTGGAAAAGGAA...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAATAGTTGTCATCTTCTaGTCTTCCAGAATAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPIVVIF*SSRIAV Trigger: CACAGCTATTCTGGAAGACCAGAAGATGACAACTAT...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGATCCACTGGTTTCCTCTaGTTGACAGCTGGGCCCCCT | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRSTGFL*LTAGPP Trigger: AGGGGGCCCAGCTGTCAATCAGAGGAAACCAGTGGA...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGTGGCCATTGGGAAACTaGCAGATCACAAATCTTGAT | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWWPLGN*QITNLD Trigger: ATCAAGATTTGTGATCTGTCAGTTTCCCAATGGCCA...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CAA 72 bp | AAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTaGGGGATCGTTTTCTTGACTGACTATTTCTGTGAG | + |
Preference number: 4 (lower is better) Translates to: KISAILPYCSGS*GIVFLTDYFCE Trigger: CTCACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTACACCAAACCTGTCGCTaGTTCATTCCTTTTCCACAT | + |
Preference number: 4 (lower is better) Translates to: VLASFLPIWDRMSRFMSLHQTCR*FIPFPH Trigger: ATGTGGAAAAGGAATGAAGCAGCGACAGGTTTGGTG...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGAGTTCGCCTTCCAATCTaGACACCGCTTCCTCTTCGA | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRVRLPI*TPLPLR Trigger: TCGAAGAGGAAGCGGTGTTCAGATTGGAAGGCGAAC...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGATTGGCCACACTGGGATaGGCAGTCGCTTTTCCCAAT | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRLATLG*AVAFPN Trigger: ATTGGGAAAAGCGACTGCTCATCCCAGTGTGGCCAA...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATACACTGGGACCACTCTaGATAATGCCACCTTGTCAA | + |
Preference number: 4 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNTLGPL*IMPPCQ Trigger: TTGACAAGGTGGCATTATTCAGAGTGGTCCCAGTGT...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTTTCTCTCCTGGTTTGTaGGTTAATGGAACATTTCTG | + |
Preference number: 4 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCFSPGL*VNGTFL Trigger: CAGAAATGTTCCATTAACTCACAAACCAGGAGAGAA...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAAATACTCCCCATCATTTaGTTTGAATGTCCCCATCAG | + |
Preference number: 4 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKILPII*FECPHQ Trigger: CTGATGGGGACATTCAAAGCAAATGATGGGGAGTAT...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR GCA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGGTTCACAGTCCATATTaGACTTTTCAGTCACAAACA | + |
Preference number: 4 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWVHSPY*TFQSQT Trigger: TGTTTGTGACTGAAAAGTGCAATATGGACTGTGAAC...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CCA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATTCGAAAACAGCACCCTaGATGTTGATCTCTTTCTTC | + |
Preference number: 4 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNSKTAP*MLISFF Trigger: GAAGAAAGAGATCAACATCCAGGGTGCTGTTTTCGA...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGAACAGATCACAAATCTTaGTTTTACCCCTCCACCACA | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRTDHKS*FYPSTT Trigger: TGTGGTGGAGGGGTAAAATCAAGATTTGTGATCTGT...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGACTCCATTTGATTTTCTaGAACTTCACAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRLHLIF*NFTRLV Trigger: CACAAGCCTTGTGAAGTTTCAGAAAATCAAATGGAG...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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3UTR CAA 72 bp | ATACATATACATTATGCAAAGCGTAACGACAGCACATaGACACACATCGTATGTAAAGATACAGTCCATTCA | + |
Preference number: 4 (lower is better) Translates to: IHIHYAKRNDST*THIVCKDTVHS Trigger: TGAATGGACTGTATCTTTACATACGATGTGTGTCAATGTGCTGTCGTTACGCTTTGCATAATGTATATGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS CCA 90 bp | CTCTCGCGCGTTGACCTGGCCACGGTAGAAACAGTGGCGCAGGTCTaGGGACTCCGTGCTGCGCCCGCCTGGTCCAGGTACCGGGGTCCC | + |
Preference number: 5 (lower is better) Translates to: LSRVDLATVETVAQV*GLRAAPAWSRYRGP Trigger: GGGACCCCGGTACCTGGACCAGGCGGGCGCAGCACGGAGTCCCCAGACCTGCGCCACTGTTTCTACCGTGGCCAGGTCAACGCGCGAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | CCCATGGTCCCCACTCGCCATCCACAGGACGGGTCTCCATGTCCCTaGTCACACACAGCCCACGGTGGCAGTGCATCCCGGGACCACAGC | + |
Preference number: 5 (lower is better) Translates to: PMVPTRHPQDGSPCP*SHTAHGGSASRDHS Trigger: GCTGTGGTCCCGGGATGCACTGCCACCGTGGGCTGTGTGTGACCAGGGACATGGAGACCCGTCCTGTGGATGGCGAGTGGGGACCATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | TCCCGGGACCACAGCTCGTCCCATCTGCCAGCGGCATGTGCTGTGTaGGACAGCCCTTGTGGACGCCTTCTGCACTCGTGCACCACAGAC | + |
Preference number: 5 (lower is better) Translates to: SRDHSSSHLPAACAV*DSPCGRLLHSCTTD Trigger: GTCTGTGGTGCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGATGGGACGAGCTGTGGTCCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | CTCGTCCCATCTGCCAGCGGCATGTGCTGTGTGCGACAGCCCTTGTaGACGCCTTCTGCACTCGTGCACCACAGACGTCGGCAGTGCTTC | + |
Preference number: 5 (lower is better) Translates to: LVPSASGMCCVRQPL*TPSALVHHRRRQCF Trigger: GAAGCACTGCCGACGTCTGTGGTGCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGATGGGACGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | GCTCACATAACGGGCCTGACTGCCTCTTCCACAGGACACAGAGCATaGGGTCCACGATCCATGGCGCCACTGTGCTGCCCTTCCCAGGGG | + |
Preference number: 5 (lower is better) Translates to: AHITGLTASSTGHRA*GPRSMAPLCCPSQG Trigger: CCCCTGGGAAGGGCAGCACAGTGGCGCCATGGATCGTGGACCCCATGCTCTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGTTATGTGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 90 bp | CCAGGGCTTCCTGTCGTGGGTGGAAACGAACTTCCCAGGACCCAGTaGGAAGGAGCGAGATCGGGCAGAGCAACCCGGTCAGCCACTTGG | + |
Preference number: 5 (lower is better) Translates to: PGLPVVGGNELPRTQ*EGARSGRATRSATW Trigger: CCAAGTGGCTGACCGGGTTGCTCTGCCCGATCTCGCTCCTTCTCACTGGGTCCTGGGAAGTTCGTTTCCACCCACGACAGGAAGCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | GGAGGAGGCTCCGGCACCCCGGAGCTACGTTTCTTCCGGCTGAAATaGCGGTTCTGGGGAAACACGTCTCCGAACTCATTGACCCGCGTG | + |
Preference number: 5 (lower is better) Translates to: GGGSGTPELRFFRLK*RFWGNTSPNSLTRV Trigger: CACGCGGGTCAATGAGTTCGGAGACGTGTTTCCCCAGAACCGGCATTTCAGCCGGAAGAAACGTAGCTCCGGGGTGCCGGAGCCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | TCCGGCACCCCGGAGCTACGTTTCTTCCGGCTGAAATGCCGGTTCTaGGGAAACACGTCTCCGAACTCATTGACCCGCGTGGGGGTCACC | + |
Preference number: 5 (lower is better) Translates to: SGTPELRFFRLKCRF*GNTSPNSLTRVGVT Trigger: GGTGACCCCCACGCGGGTCAATGAGTTCGGAGACGTGTTTCCCCAGAACCGGCATTTCAGCCGGAAGAAACGTAGCTCCGGGGTGCCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGAGTCCTGTCTGTCACTaGGCCGGCTGGCTTGCGGGC | + |
Preference number: 5 (lower is better) Translates to: GERGAPTPVFSQSNPPSRSPVCH*AGWLAG Trigger: GCCCGCAAGCCAGCCGGCCAAGTGACAGACAGGACT...CCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 90 bp | GTCACAGAGCCGGGCTGTGCTCTTGATTCCACCTCCGCATGTCCTTaGACACGAGCTGTAGGGTCCCCATGGTCCCCACTCGCCATCCAC | + |
Preference number: 5 (lower is better) Translates to: VTEPGCALDSTSACP*TRAVGSPWSPLAIH Trigger: GTGGATGGCGAGTGGGGACCATGGGGACCCTACAGCTCGTGTTCAAGGACATGCGGAGGTGGAATCAAGAGCACAGCCCGGCTCTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | GAGGCCGGGTGGATGGATCACACATGTCTTCAGACACTCGACCAGTaGCTCTCAGCCTGCAGTACACCTCCCTCTGCTGCACCCCTGACC | + |
Preference number: 5 (lower is better) Translates to: EAGWMDHTCLQTLDQ*LSACSTPPSAAPLT Trigger: GGTCAGGGGTGCAGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTGGTCGAGTGTCTGAAGACATGTGTGATCCATCCACCCGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATTGCTGGGAACGTGGCTaGGCTGCTCAGAGGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: REARGERGAPTPVFSQSNCWERG*AAQRSW Trigger: CCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCA...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTCGGAGCCACAGTGCCTaGACTCTGGGGGCTTGGAGG | + |
Preference number: 5 (lower is better) Translates to: HRRLCFHRAIPLHGPSKPRSHSA*TLGAWR Trigger: CCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCCG...AGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 90 bp | GTCCCCATAATTCCAGTGCGGACAAGGTCCGGAGCCACAGTGCCTTaGCTCTGGGGGCTTGGAGGACCCATCACAGGAAGTAGCGCTTCG | + |
Preference number: 5 (lower is better) Translates to: VPIIPVRTRSGATVP*LWGLGGPITGSSAS Trigger: CGAAGCGCTACTTCCTGTGATGGGTCCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCCGGACCTTGTCCGCACTGGAATTATGGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | TCGAAATTTCATCCTGCGGCCCACACAGTACCTTCCTCCGTTTCGTaGCTCGGGCCGGTCACAGAGCCGGGCTGTGCTCTTGATTCCACC | + |
Preference number: 5 (lower is better) Translates to: SKFHPAAHTVPSSVS*LGPVTEPGCALDST Trigger: GGTGGAATCAAGAGCACAGCCCGGCTCTGTGACCGGCCCGAGCCACGAAACGGAGGAAGGTACTGTGTGGGCCGCAGGATGAAATTTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTGTGATCACAGCCAGCTaGCCGACAGAGGCCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: IWKSREARGERGAPTPVFVITAS*PTEALD Trigger: GTCCAGGGCCTCTGTCGGCAAGCTGGCTGTGATCAC...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTACTTGGCCGGCTGGCTaGCGGGCACTCTCTGTCATC | + |
Preference number: 5 (lower is better) Translates to: IWKSREARGERGAPTPVFTWPAG*RALSVI Trigger: GATGACAGAGAGTGCCCGCAAGCCAGCCGGCCAAGT...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS GCA 90 bp | CCACTTCATCATGAGCATCCCGGCAGCTCACATAACGGGCCTGACTaGCTCTTCCACAGGACACAGAGCATGGGGTCCACGATCCATGGC | + |
Preference number: 5 (lower is better) Translates to: PLHHEHPGSSHNGPD*LFHRTQSMGSTIHG Trigger: GCCATGGATCGTGGACCCCATGCTCTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGTTATGTGAGCTGCCGGGATGCTCATGATGAAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACTGCCAGGCTACATTCTaGTTCAGTCACAGGACGGCC | + |
Preference number: 5 (lower is better) Translates to: GSLGKPGVREEHRRLCFHCQATF*FSHRTA Trigger: GGCCGTCCTGTGACTGAACAAGAATGTAGCCTGGCA...GTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGCTTGACTCTGGGGGCTaGGAGGACCCATCACAGGAA | + |
Preference number: 5 (lower is better) Translates to: GERGAPTPVFSQSNPPSRLDSGG*EDPSQE Trigger: TTCCTGTGATGGGTCCTCCAAGCCCCCAGAGTCAAG...CCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 90 bp | CATGGTCCCCGATACCAGGACACATCTTCAGGGCAGGCGTGCAGGTaGCACTGCATCATGCTAGGTGGCTTGGGCAGTTCACAGCTGTGT | + |
Preference number: 5 (lower is better) Translates to: HGPRYQDTSSGQACR*HCIMLGGLGSSQLC Trigger: ACACAGCTGTGAACTGCCCAAGCCACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCCTGAAGATGTGTCCTGGTATCGGGGACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | ACTCACTCCACTCACTCGTTGCCCAGCTGGGACACGGAAATTCATTaGAGTTCTCCAGCACCACCCGCGGAAGCTCCCGACACTCGCTTT | + |
Preference number: 5 (lower is better) Translates to: THSTHSLPSWDTEIH*SSPAPPAEAPDTRF Trigger: AAAGCGAGTGTCGGGAGCTTCCGCGGGTGGTGCTGGAGAACTGCAATGAATTTCCGTGTCCCAGCTGGGCAACGAGTGAGTGGAGTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | TCAGACACTCGACCAGTGCCTCTCAGCCTGCAGTACACCTCCCTCTaGTGCACCCCTGACCCACAGGTCACAGAGCACTCCTTCCATTTA | + |
Preference number: 5 (lower is better) Translates to: SDTRPVPLSLQYTSL*CTPDPQVTEHSFHL Trigger: TAAATGGAAGGAGTGCTCTGTGACCTGTGGGTCAGGGGTGCAGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTGGTCGAGTGTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS GCA 90 bp | ATGGATCACACATGTCTTCAGACACTCGACCAGTGCCTCTCAGCCTaGAGTACACCTCCCTCTGCTGCACCCCTGACCCACAGGTCACAG | + |
Preference number: 5 (lower is better) Translates to: MDHTCLQTLDQCLSA*STPPSAAPLTHRSQ Trigger: CTGTGACCTGTGGGTCAGGGGTGCAGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTGGTCGAGTGTCTGAAGACATGTGTGATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 90 bp | CACCACTTCGTAGGAGGCCAGAGTCTTCACCAGGGCTTCCTGTCGTaGGTGGAAACGAACTTCCCAGGACCCAGTGAGAAGGAGCGAGAT | + |
Preference number: 5 (lower is better) Translates to: HHFVGGQSLHQGFLS*VETNFPGPSEKERD Trigger: ATCTCGCTCCTTCTCACTGGGTCCTGGGAAGTTCGTTTCCACCCACGACAGGAAGCCCTGGTGAAGACTCTGGCCTCCTACGAAGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAACTTGGCCGGCTGGCTaGCGGGCACTCTCTGTCATC | + |
Preference number: 5 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVTWPAG*RALSVI Trigger: GATGACAGAGAGTGCCCGCAAGCCAGCCGGCCAAGT...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAAGTCCTGTCTGTCACTaGGCCGGCTGGCTTGCGGGC | + |
Preference number: 5 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPSPVCH*AGWLAG Trigger: GCCCGCAAGCCAGCCGGCCAAGTGACAGACAGGACT...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCACGGAGCCACAGTGCCTaGACTCTGGGGGCTTGGAGG | + |
Preference number: 5 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPRSHSA*TLGAWR Trigger: CCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCCG...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS TCA 90 bp | GGCAGTGCTTCAAGTAGGGACACACTTGTGATCCAGGGCCAAACATaGGCTCACACTGCCTGTTCCCATCGTACACGGAGCCCGGAAGCT | + |
Preference number: 5 (lower is better) Translates to: GSASSRDTLVIQGQT*AHTACSHRTRSPEA Trigger: AGCTTCCGGGCTCCGTGTACGATGGGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTACTTGAAGCACTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCCACACACTCCACACTaGTCTCTCTTGGCCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: RFEYGSLGKPGVREEHRRPHTPH*SLLALE Trigger: CTCCAAGGCCAAGAGAGACAAGTGTGGAGTGTGTGG...GCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 90 bp | CGTGCACCACAGACGTCGGCAGTGCTTCAAGTAGGGACACACTTGTaGTCCAGGGCCAAACATGAGCTCACACTGCCTGTTCCCATCGTA | + |
Preference number: 5 (lower is better) Translates to: RAPQTSAVLQVGTHL*SRAKHELTLPVPIV Trigger: TACGATGGGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTACTTGAAGCACTGCCGACGTCTGTGGTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 90 bp | CCACACACTCCACACTTGTCTCTCTTGGCCTTGGAGTTTAACACGTaGTCACAGCCAGCTTGCCGACAGAGGCCCTGGACACAGATGTCG | + |
Preference number: 5 (lower is better) Translates to: PHTPHLSLLALEFNT*SQPACRQRPWTQMS Trigger: CGACATCTGTGTCCAGGGCCTCTGTCGGCAAGCTGGCTGTGATCACGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTGGAGTGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | GAGCTCACACTGCCTGTTCCCATCGTACACGGAGCCCGGAAGCTGTaGAGACAGGTCATATGTTCTCCCGTTGGGTTTGTCAAGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: ELTLPVPIVHGARKL*RQVICSPVGFVKKA Trigger: TGCCTTCTTGACAAACCCAACGGGAGAACATATGACCTGTCTCCACAGCTTCCGGGCTCCGTGTACGATGGGAACAGGCAGTGTGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCACACTTGTCTCTCTaGGCCTTGGAGTTTAACACG | + |
Preference number: 5 (lower is better) Translates to: REARGERGAPTPVFSQSNPHLSL*ALEFNT Trigger: CGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTGG...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGAGTCTGGCACGAAGAGTaGTCACCACCACACACTCCA | + |
Preference number: 5 (lower is better) Translates to: DACVFTEQSPFTVLPSLGVWHEE*SPPHTP Trigger: TGGAGTGTGTGGTGGTGACAACTCTTCGTGCCAGAC...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGAGACCTTGGCACATTTaGGTACAGTCTTGCCACGGC | + |
Preference number: 5 (lower is better) Translates to: FEYGSLGKPGVREEHRRLRPWHI*VQSCHG Trigger: GCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCT...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGCACTCCACTCACTCGTaGCCCAGCTGGGACACGGAA | + |
Preference number: 5 (lower is better) Translates to: APKERFEYGSLGKPGVREHSTHS*PSWDTE Trigger: TTCCGTGTCCCAGCTGGGCAACGAGTGAGTGGAGTG...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACGTGTTCCTGTGTCATTaGGCCATTGGGAAACTGACA | + |
Preference number: 5 (lower is better) Translates to: GSLGKPGVREEHRRLCFHVFLCH*AIGKLT Trigger: TGTCAGTTTCCCAATGGCCAAATGACACAGGAACAC...GTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 90 bp | CCAGGCAAGGTGCCAATATACAGTCCTGTCTGTCACTTGGCCGGCTaGCTTGCGGGCACTCTCTGTCATCTAGCATGGTGCCAAATATCT | + |
Preference number: 5 (lower is better) Translates to: PGKVPIYSPVCHLAG*LAGTLCHLAWCQIS Trigger: AGATATTTGGCACCATGCTAGATGACAGAGAGTGCCCGCAAGCCAGCCGGCCAAGTGACAGACAGGACTGTATATTGGCACCTTGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | CACATCTTCAGGGCAGGCGTGCAGGTGACACTGCATCATGCTAGGTaGCTTGGGCAGTTCACAGCTGTGTTCCTGTGTCATTTGGCCATT | + |
Preference number: 5 (lower is better) Translates to: HIFRAGVQVTLHHAR*LGQFTAVFLCHLAI Trigger: AATGGCCAAATGACACAGGAACACAGCTGTGAACTGCCCAAGCCACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCCTGAAGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGATCAGATGTGGCTTGTaGTGGTCATCGTCATGCGCA | + |
Preference number: 5 (lower is better) Translates to: FEYGSLGKPGVREEHRRLIRCGL*WSSSCA Trigger: TGCGCATGACGATGACCACAACAAGCCACATCTGAT...CAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTAGTCTGGCACGAAGAGTaGTCACCACCACACACTCCA | + |
Preference number: 5 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVVWHEE*SPPHTP Trigger: TGGAGTGTGTGGTGGTGACAACTCTTCGTGCCAGAC...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCACTGAATAATGCCACCTaGTCAAAACACAGCTGCCAT | + |
Preference number: 5 (lower is better) Translates to: LGKPGVREEHRRLCFHRALNNAT*SKHSCH Trigger: ATGGCAGCTGTGTTTTGACAAGGTGGCATTATTCAG...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAAGCCACTTTGCTGTGTaGGATATCTTCATCCCAGTT | + |
Preference number: 5 (lower is better) Translates to: LGKPGVREEHRRLCFHRASHFAV*DIFIPV Trigger: AACTGGGATGAAGATATCCAACACAGCAAAGTGGCT...TGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACGCCTGAGCGAGCCACTTaGCTGTGTTGGATATCTTCA | + |
Preference number: 5 (lower is better) Translates to: RLCFHRAIPLHGPSKPWTPERAT*LCWISS Trigger: TGAAGATATCCAACACAGCAAAGTGGCTCGCTCAGG...CGTCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 90 bp | GTTCCGTCTTGGGACCTGTGGATGATGACAGAGGCATACCTCCCCTaGGCGAGCCACTTTGCTGTGTTGGATATCTTCATCCCAGTTCCT | + |
Preference number: 5 (lower is better) Translates to: VPSWDLWMMTEAYLP*ASHFAVLDIFIPVP Trigger: AGGAACTGGGATGAAGATATCCAACACAGCAAAGTGGCTCGCTCAGGGGAGGTATGCCTCTGTCATCATCCACAGGTCCCAAGACGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS GCA 90 bp | CAAGGTGCCAATATACAGTCCTGTCTGTCACTTGGCCGGCTGGCTTaGGGGCACTCTCTGTCATCTAGCATGGTGCCAAATATCTCACTG | + |
Preference number: 5 (lower is better) Translates to: QGANIQSCLSLGRLA*GHSLSSSMVPNISL Trigger: CAGTGAGATATTTGGCACCATGCTAGATGACAGAGAGTGCCCGCAAGCCAGCCGGCCAAGTGACAGACAGGACTGTATATTGGCACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | CCTGATCTTGATTCTCTCCTGGTTTGTGAGTTAATGGAACATTTCTaGTGGGAACGTGGCTTGGCTGCTCAGAGGAGCTGGGAGCTCGGC | + |
Preference number: 5 (lower is better) Translates to: PDLDSLLVCELMEHF*WERGLAAQRSWELG Trigger: GCCGAGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAATGTTCCATTAACTCACAAACCAGGAGAGAATCAAGATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | TCGGCTGGGAGGCTTGAGCTGGTCACCACAGTACTGATCTCCTACTaGGACAGCCTGTCCTTTATGAACCGAGTACTTCATGCAGTGAAC | + |
Preference number: 5 (lower is better) Translates to: SAGRLELVTTVLISY*DSLSFMNRVLHAVN Trigger: GTTCACTGCATGAAGTACTCGGTTCATAAAGGACAGGCTGTCCCAGTAGGAGATCAGTACTGTGGTGACCAGCTCAAGCCTCCCAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | TCAGCGACTCGGGCTTGGTACTGGCATTACAGAAACCATCCCTCATaGGGTCTTCACTCAGCTGACACCAAACCTGTCGCTGCTTCATTC | + |
Preference number: 5 (lower is better) Translates to: SATRAWYWHYRNHPS*GLHSADTKPVAASF Trigger: GAATGAAGCAGCGACAGGTTTGGTGTCAGCTGAGTGAAGACCCCATGAGGGATGGTTTCTGTAATGCCAGTACCAAGCCCGAGTCGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAATCTCGGAAGTCTCGCTaGCCTTTTGGACATGAATCA | + |
Preference number: 5 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQSRKSR*PFGHES Trigger: TGATTCATGTCCAAAAGGCAAGCGAGACTTCCGAGA...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTACAGCACCCTGGATGTaGATCTCTTTCTTCGCCATA | + |
Preference number: 5 (lower is better) Translates to: HRRLCFHRAIPLHGPSKPTAPWM*ISFFAI Trigger: TATGGCGAAGAAAGAGATCAACATCCAGGGTGCTGT...AGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGTCCCAGGAGAACAGATaGCTCCTCTCCTCAATGGGG | + |
Preference number: 5 (lower is better) Translates to: APKERFEYGSLGKPGVRESQENR*LLSSMG Trigger: CCCCATTGAGGAGAGGAGCAATCTGTTCTCCTGGGA...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTTGCTGGGAACGTGGCTaGGCTGCTCAGAGGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCCWERG*AAQRSW Trigger: CCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCA...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCGACAGATCACAAATCTaGATTTTACCCCTCCACCAC | + |
Preference number: 5 (lower is better) Translates to: EEHRRLCFHRAIPLHGPSDRSQI*ILPLHH Trigger: GTGGTGGAGGGGTAAAATCAAGATTTGTGATCTGTC...GGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATAGATCCACTCTCACTTaGCTAAAAACAGTGTACCCG | + |
Preference number: 5 (lower is better) Translates to: REARGERGAPTPVFSQSNRSTLT*LKTVYP Trigger: CGGGTACACTGTTTTTAGCAAAGTGAGAGTGGATCT...ATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGCTTGACTCTGGGGGCTaGGAGGACCCATCACAGGAA | + |
Preference number: 5 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWLDSGG*EDPSQE Trigger: TTCCTGTGATGGGTCCTCCAAGCCCCCAGAGTCAAG...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACACTCCTTCCATTTATaGGCCTTCCATGAAGGGCAT | + |
Preference number: 5 (lower is better) Translates to: DACVFTEQSPFTVLPSLGHSFHL*AFHEGH Trigger: ATGCCCTTCATGGAAGGCCAATAAATGGAAGGAGTG...TCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCTCACAGAGACTTTCATaGGCTTGTACGTTTTGCTCA | + |
Preference number: 5 (lower is better) Translates to: EEHRRLCFHRAIPLHGPSSQRLS*ACTFCS Trigger: TGAGCAAAACGTACAAGCCAATGAAAGTCTCTGTGA...GGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAGCCTTGGACGGGGTTCCTGCATTTTTaGATTGAAAGCGGCTTCGTT | + |
Preference number: 5 (lower is better) Translates to: RLCFHRAIPLHGPSKPWTGFLHF*IESGFV Trigger: AACGAAGCCGCTTTCAATCAAAAAATGCAGGAACCC...CGTCCAAGGCTTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAACAAGTTACTGAGCACTaGCTCCATTTTCCCACTTTC | + |
Preference number: 5 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQQVTEH*LHFPTF Trigger: GAAAGTGGGAAAATGGAGCAAGTGCTCAGTAACTTG...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GAGAGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCATCTGCAGTTTTGATTaGCATGGATTCGAGATCCAC | + |
Preference number: 5 (lower is better) Translates to: ERGAPTPVFSQSNPPSRSICSFD*HGFEIH Trigger: GTGGATCTCGAATCCATGCAAATCAAAACTGCAGAT...GGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCCAGTTCCTGCTAAGTaGATGCTGAACTGCCCCTGT | + |
Preference number: 5 (lower is better) Translates to: PKERFEYGSLGKPGVREEPVPAK*MLNCPC Trigger: ACAGGGGCAGTTCAGCATCAACTTAGCAGGAACTGG...CTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS GCA 90 bp | TGCCTTTTGGACATGAATCAGTATTACATGATCGAAATTTCATCCTaGGGCCCACACAGTACCTTCCTCCGTTTCGTGGCTCGGGCCGGT | + |
Preference number: 5 (lower is better) Translates to: CLLDMNQYYMIEISS*GPHSTFLRFVARAG Trigger: ACCGGCCCGAGCCACGAAACGGAGGAAGGTACTGTGTGGGCCGCAGGATGAAATTTCGATCATGTAATACTGATTCATGTCCAAAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | CTTTACAACCACATTGTAACCGTAATGGGCACTGTTGAAGACACCTaGCAGGGTCTGGCACGAAGAGTTGTCACCACCACACACTCCACA | + |
Preference number: 5 (lower is better) Translates to: LYNHIVTVMGTVEDT*QGLARRVVTTTHST Trigger: TGTGGAGTGTGTGGTGGTGACAACTCTTCGTGCCAGACCCTGGCAGGTGTCTTCAACAGTGCCCATTACGGTTACAATGTGGTTGTAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | ATGAAGACCTTGGCACATTTTGGTACAGTCTTGCCACGGCCCGTATaGATCCCAGGAGAACAGATTGCTCCTCTCCTCAATGGGGATGTT | + |
Preference number: 5 (lower is better) Translates to: MKTLAHFGTVLPRPV*IPGEQIAPLLNGDV Trigger: AACATCCCCATTGAGGAGAGGAGCAATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | ATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACCGACGCCTGTGTTTAGTCTCGCTTGCCTTTaGGACATGAATCAGTATTAC | + |
Preference number: 5 (lower is better) Translates to: IWKSREARGERGAPTPVFSLACL*DMNQYY Trigger: GTAATACTGATTCATGTCCAAAAGGCAAGCGAGACT...AAACACAGGCGTCGGTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGAAGCTTGGGGATCGTCCACACTTGTCTCTCTaGGCCTTGGAGTTTAACACG | + |
Preference number: 5 (lower is better) Translates to: HTEDLCNPPLLLWKLGDRPHLSL*ALEFNT Trigger: CGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTGG...ACGATCCCCAAGCTTCCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGCCACACACTCCACACTaGTCTCTCTTGGCCTTGGAG | + |
Preference number: 5 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWPHTPH*SLLALE Trigger: CTCCAAGGCCAAGAGAGACAAGTGTGGAGTGTGTGG...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GTTTCTGTCCTGTACTTTAGACATGCCTTTCTGTCCACCAAGGTCTCAGCAAAACACTCCACTCACTCGTaGCCCAGCTGGGACACGGAA | + |
Preference number: 5 (lower is better) Translates to: VSVLYFRHAFLSTKVSAKHSTHS*PSWDTE Trigger: TTCCGTGTCCCAGCTGGGCAACGAGTGAGTGGAGTG...TTTTGCTGAGACCTTGGTGGACAGAAAGGCATGTCTAAAGTACAGGACAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AGAGGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCCATCCTTGGTAACATaGTTTGTAACTTGGAGTTCC | + |
Preference number: 5 (lower is better) Translates to: RGAPTPVFSQSNPPSRSFPSLVT*FVTWSS Trigger: GGAACTCCAAGTTACAAACAATGTTACCAAGGATGG...GAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 90 bp | ACACGGAGCCCGGAAGCTGTGGAGACAGGTCATATGTTCTCCCGTTaGGTTTGTCAAGAAGGCATTCTCCATGACCAGTGTCTAGAAATT | + |
Preference number: 5 (lower is better) Translates to: TRSPEAVETGHMFSR*VCQEGILHDQCLEI Trigger: AATTTCTAGACACTGGTCATGGAGAATGCCTTCTTGACAAACCCAACGGGAGAACATATGACCTGTCTCCACAGCTTCCGGGCTCCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GCACCCAAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGTCCCCATCATTTGCTTaGAATGTCCCCATCAGTCCT | + |
Preference number: 5 (lower is better) Translates to: APKERFEYGSLGKPGVRESPSFA*NVPISP Trigger: AGGACTGATGGGGACATTCAAAGCAAATGATGGGGA...CTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTTGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATGTGATCACAGCCAGCTaGCCGACAGAGGCCCTGGAC | + |
Preference number: 5 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNVITAS*PTEALD Trigger: GTCCAGGGCCTCTGTCGGCAAGCTGGCTGTGATCAC...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GGAGCACCGACGCCTGTGTTTTCACAGAGCAATCCCCCTTCACGGTCCTTCCAAAGTTCACAGTCCATATaGCACTTTTCAGTCACAAAC | + |
Preference number: 5 (lower is better) Translates to: GAPTPVFSQSNPPSRSFQSSQSI*HFSVTN Trigger: GTTTGTGACTGAAAAGTGCAATATGGACTGTGAACT...TTGGAAGGACCGTGAAGGGGGATTGCTCTGTGAAAACACAGGCGTCGGTGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | AAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGATCCAGGTCCCCAGGTACTGAATAATGCCACCTaGTCAAAACACAGCTGCCAT | + |
Preference number: 5 (lower is better) Translates to: KIAPWSSEAKPPDPGPQVLNNAT*SKHSCH Trigger: ATGGCAGCTGTGTTTTGACAAGGTGGCATTATTCAG...TACCTGGGGACCTGGATCTGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGTGTTCCTGTGTCATTaGGCCATTGGGAAACTGACA | + |
Preference number: 5 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPVFLCH*AIGKLT Trigger: TGTCAGTTTCCCAATGGCCAAATGACACAGGAACAC...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS TCA 90 bp | CGCCTCCAGCCGGTCCGTGCTGTTAATTCTTTCAATCGAGTTGTTTaGCCCGCTGTATTCGAAAACAGCACCCTGGATGTTGATCTCTTT | + |
Preference number: 5 (lower is better) Translates to: RLQPVRAVNSFNRVV*PAVFENSTLDVDLF Trigger: AAAGAGATCAACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGATTGAAAGAATTAACAGCACGGACCGGCTGGAGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 90 bp | ACAACTGCATGGTCGCTCTTACGGACGCAGGCAATTTTTCTTCTATaGAGACCTTGGCACATTTTGGTACAGTCTTGCCACGGCCCGTAT | + |
Preference number: 5 (lower is better) Translates to: TTAWSLLRTQAIFLL*RPWHILVQSCHGPY Trigger: ATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGAAAAATTGCCTGCGTCCGTAAGAGCGACCATGCAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 90 bp | GTACTGGCATTACAGAAACCATCCCTCATGGGGTCTTCACTCAGCTaGCACCAAACCTGTCGCTGCTTCATTCCTTTTCCACATGTGACA | + |
Preference number: 5 (lower is better) Translates to: VLALQKPSLMGSSLS*HQTCRCFIPFPHVT Trigger: TGTCACATGTGGAAAAGGAATGAAGCAGCGACAGGTTTGGTGTCAGCTGAGTGAAGACCCCATGAGGGATGGTTTCTGTAATGCCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 90 bp | TACGGACGCAGGCAATTTTTCTTCTATGAAGACCTTGGCACATTTTaGTACAGTCTTGCCACGGCCCGTATGGATCCCAGGAGAACAGAT | + |
Preference number: 5 (lower is better) Translates to: YGRRQFFFYEDLGTF*YSLATARMDPRRTD Trigger: ATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGAAAAATTGCCTGCGTCCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TATCCACTCCCTCACAGGAAAATAGCACCATGGAGCTCAGAAGCAAAGCCGCCAGACAGATCACAAATCTaGATTTTACCCCTCCACCAC | + |
Preference number: 5 (lower is better) Translates to: YPLPHRKIAPWSSEAKPPDRSQI*ILPLHH Trigger: GTGGTGGAGGGGTAAAATCAAGATTTGTGATCTGTC...TGGCGGCTTTGCTTCTGAGCTCCATGGTGCTATTTTCCTGTGAGGGAGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS TCA 90 bp | ATGGATCCCAGGAGAACAGATTGCTCCTCTCCTCAATGGGGATGTTaGAGGAATAGCGCACGTCAGGGTTGTATAAATTACCCACACACA | + |
Preference number: 5 (lower is better) Translates to: MDPRRTDCSSPQWGC*RNSARQGCINYPHT Trigger: TGTGTGTGGGTAATTTATACAACCCTGACGTGCGCTATTCCTTCAACATCCCCATTGAGGAGAGGAGCAATCTGTTCTCCTGGGATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | TATCCTTGGCCACACTGGGATGAGCAGTCGCTTTTCCCAATGATGTaGCACCTGAGTTCACAGTCCATATTGCACTTTTCAGTCACAAAC | + |
Preference number: 5 (lower is better) Translates to: YPWPHWDEQSLFPMM*HLSSQSILHFSVTN Trigger: GTTTGTGACTGAAAAGTGCAATATGGACTGTGAACTCAGGTGGCACATCATTGGGAAAAGCGACTGCTCATCCCAGTGTGGCCAAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGTCCCCATCATTTGCTTaGAATGTCCCCATCAGTCCT | + |
Preference number: 5 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWSPSFA*NVPISP Trigger: AGGACTGATGGGGACATTCAAAGCAAATGATGGGGA...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AACAGTTGTGTGGTACACACTGAAGATCTCTGCAATCCTCCCTTACTGCTCTGGACAGCACCCTGGATGTaGATCTCTTTCTTCGCCATA | + |
Preference number: 5 (lower is better) Translates to: NSCVVHTEDLCNPPLLLWTAPWM*ISFFAI Trigger: TATGGCGAAGAAAGAGATCAACATCCAGGGTGCTGT...CCAGAGCAGTAAGGGAGGATTGCAGAGATCTTCAGTGTGTACCACACAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAAGACCTTGGCACATTTaGGTACAGTCTTGCCACGGC | + |
Preference number: 5 (lower is better) Translates to: VLASFLPIWDRMSRFMSLRPWHI*VQSCHG Trigger: GCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCT...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS TCA 90 bp | TCTGGAGCTCTGAGAGGGCAAAGCAGTTTTCTCCATTTGATTTTCTaGAACTTCACAAGGCTTGTGAGACCGCGCAAAGGAGTTCCTCTT | + |
Preference number: 5 (lower is better) Translates to: SGALRGQSSFLHLIF*NFTRLVRPRKGVPL Trigger: AAGAGGAACTCCTTTGCGCGGTCTCACAAGCCTTGTGAAGTTTCAGAAAATCAAATGGAGAAAACTGCTTTGCCCTCTCAGAGCTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAATCAGATGTGGCTTGTaGTGGTCATCGTCATGCGCA | + |
Preference number: 5 (lower is better) Translates to: VLASFLPIWDRMSRFMSLIRCGL*WSSSCA Trigger: TGCGCATGACGATGACCACAACAAGCCACATCTGAT...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATTCCCAGGAGAACAGATaGCTCCTCTCCTCAATGGGG | + |
Preference number: 5 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNSQENR*LLSSMG Trigger: CCCCATTGAGGAGAGGAGCAATCTGTTCTCCTGGGA...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | AAAGAAAGGTTTGAATATGGAAGTCTCGGGAAGCCAGGGGTGAGAGAGGAGCACTCTTCTATGAAGACCTaGGCACATTTTGGTACAGTC | + |
Preference number: 5 (lower is better) Translates to: KERFEYGSLGKPGVREEHSSMKT*AHFGTV Trigger: GACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGA...GTGCTCCTCTCTCACCCCTGGCTTCCCGAGACTTCCATATTCAAACCTTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | GTACTGGCTAGCTTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTATCTCGGAAGTCTCGCTaGCCTTTTGGACATGAATCA | + |
Preference number: 5 (lower is better) Translates to: VLASFLPIWDRMSRFMSLSRKSR*PFGHES Trigger: TGATTCATGTCCAAAAGGCAAGCGAGACTTCCGAGA...TAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAAGCTAGCCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS GCA 90 bp | ACTCCTTCCATTTATTGGCCTTCCATGAAGGGCATCGTCCCGATCTaGAAGCTTTGTGAGTTCGAGGTTTATGCAAATGACTGCAATATT | + |
Preference number: 5 (lower is better) Translates to: TPSIYWPSMKGIVPI*KLCEFEVYANDCNI Trigger: AATATTGCAGTCATTTGCATAAACCTCGAACTCACAAAGCTTGCAGATCGGGACGATGCCCTTCATGGAAGGCCAATAAATGGAAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCATTTGGGACAGAATGTCTCGGTTTATGAGTTTAGTTACAAATAGATGCCAGGCTACATTCTaGTTCAGTCACAGGACGGCC | + |
Preference number: 5 (lower is better) Translates to: FLPIWDRMSRFMSLVTNRCQATF*FSHRTA Trigger: GGCCGTCCTGTGACTGAACAAGAATGTAGCCTGGCA...TCTATTTGTAACTAAACTCATAAACCGAGACATTCTGTCCCAAATGGGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS TCA 90 bp | TCGAGTTGTTTGACCCGCTGTATTCGAAAACAGCACCCTGGATGTTaGTCTCTTTCTTCGCCATACTTACAACAAAGTTTCCATTCAGGA | + |
Preference number: 5 (lower is better) Translates to: SSCLTRCIRKQHPGC*SLSSPYLQQSFHSG Trigger: TCCTGAATGGAAACTTTGTTGTAAGTATGGCGAAGAAAGAGATCAACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 90 bp | TTAAACGCTTTAAACATAAGTCACTGGGCCAACCGTTCTCAGTCCTaGATGCTACTCTTCTCTCCATTATCCCAATTCCACAAGTTACTG | + |
Preference number: 5 (lower is better) Translates to: LNALNISHWANRSQS*MLLFSPLSQFHKLL Trigger: CAGTAACTTGTGGAATTGGGATAATGGAGAGAAGAGTAGCATGCAGGACTGAGAACGGTTGGCCCAGTGACTTATGTTTAAAGCGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 90 bp | ATTTCTTTTGGGCATCTGGCTTTAAACGCTTTAAACATAAGTCACTaGGCCAACCGTTCTCAGTCCTGCATGCTACTCTTCTCTCCATTA | + |
Preference number: 5 (lower is better) Translates to: ISFGHLALNALNISH*ANRSQSCMLLFSPL Trigger: TAATGGAGAGAAGAGTAGCATGCAGGACTGAGAACGGTTGGCCCAGTGACTTATGTTTAAAGCGTTTAAAGCCAGATGCCCAAAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS-3UTR CAA 90 bp | CTCCCTTACTGCTCTGGAAGCTTGGGGATCGTTTTCTTGACTGACTATTTCTGTAGTTCACAGTCCATATaGCACTTTTCAGTCACAAAC | + |
Preference number: 5 (lower is better) Translates to: LPYCSGSLGIVFLTDYFCSSQSI*HFSVTN Trigger: GTTTGTGACTGAAAAGTGCAATATGGACTGTGAACT...ACAGAAATAGTCAGTCAAGAAAACGATCCCCAAGCTTCCAGAGCAGTAAGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS-3UTR CAA 90 bp | TTCTGTCCACCAAGGTCTCAGCAAAACCTTCTAAGAAATGGCCTGATAGTAAATTCTTCTATGAAGACCTaGGCACATTTTGGTACAGTC | + |
Preference number: 5 (lower is better) Translates to: FCPPRSQQNLLRNGLIVNSSMKT*AHFGTV Trigger: GACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGA...ATTTACTATCAGGCCATTTCTTAGAAGGTTTTGCTGAGACCTTGGTGGACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155907.2 |
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CDS CCA 72 bp | GTTGACCTGGCCACGGTAGAAACAGTGGCGCAGGTCTaGGGACTCCGTGCTGCGCCCGCCTGGTCCAGGTAC | + |
Preference number: 6 (lower is better) Translates to: VDLATVETVAQV*GLRAAPAWSRY Trigger: GTACCTGGACCAGGCGGGCGCAGCACGGAGTCCCCAGACCTGCGCCACTGTTTCTACCGTGGCCAGGTCAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CGCCCGTCTTCATCCTGGCAGACCACAGCCCTGTGCTaGAGACCACCGGCGCAGCTTCTGGAGCATGCTCCC | + |
Preference number: 6 (lower is better) Translates to: RPSSSWQTTALC*RPPAQLLEHAP Trigger: GGGAGCATGCTCCAGAAGCTGCGCCGGTGGTCTTCAGCACAGGGCTGTGGTCTGCCAGGATGAAGACGGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | TCCATGTCCCTGGTCACACACAGCCCACGGTGGCAGTaGATCCCGGGACCACAGCTCGTCCCATCTGCCAGC | + |
Preference number: 6 (lower is better) Translates to: SMSLVTHSPRWQ*IPGPQLVPSAS Trigger: GCTGGCAGATGGGACGAGCTGTGGTCCCGGGATGCACTGCCACCGTGGGCTGTGTGTGACCAGGGACATGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | CGGGTCTCCATGTCCCTGGTCACACACAGCCCACGGTaGCAGTGCATCCCGGGACCACAGCTCGTCCCATCT | + |
Preference number: 6 (lower is better) Translates to: RVSMSLVTHSPR*QCIPGPQLVPS Trigger: AGATGGGACGAGCTGTGGTCCCGGGATGCACTGCCACCGTGGGCTGTGTGTGACCAGGGACATGGAGACCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | CATCCTGCGGCCCACACAGTACCTTCCTCCGTTTCGTaGCTCGGGCCGGTCACAGAGCCGGGCTGTGCTCTT | + |
Preference number: 6 (lower is better) Translates to: HPAAHTVPSSVS*LGPVTEPGCAL Trigger: AAGAGCACAGCCCGGCTCTGTGACCGGCCCGAGCCACGAAACGGAGGAAGGTACTGTGTGGGCCGCAGGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 90 bp | CAGCTCGTCCCATCTGCCAGCGGCATGTGCTGTGTGCGACAGCCCTaGTGGACGCCTTCTGCACTCGTGCACCACAGACGTCGGCAGTGC | + |
Preference number: 6 (lower is better) Translates to: QLVPSASGMCCVRQP*WTPSALVHHRRRQC Trigger: GCACTGCCGACGTCTGTGGTGCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGATGGGACGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | AGGTACCGGGGTCCCCAAGTGCACCTCAGTGTAGCCTaGAGCCAGGAAGGCCGCATCAGCGCTCAGGTTCAG | + |
Preference number: 6 (lower is better) Translates to: RYRGPQVHLSVA*SQEGRISAQVQ Trigger: CTGAACCTGAGCGCTGATGCGGCCTTCCTGGCTGCAGGCTACACTGAGGTGCACTTGGGGACCCCGGTACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CACAGCTCGTCCCATCTGCCAGCGGCATGTGCTGTGTaGGACAGCCCTTGTGGACGCCTTCTGCACTCGTGC | + |
Preference number: 6 (lower is better) Translates to: HSSSHLPAACAV*DSPCGRLLHSC Trigger: GCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGATGGGACGAGCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TCTGCCAGCGGCATGTGCTGTGTGCGACAGCCCTTGTaGACGCCTTCTGCACTCGTGCACCACAGACGTCGG | + |
Preference number: 6 (lower is better) Translates to: SASGMCCVRQPL*TPSALVHHRRR Trigger: CCGACGTCTGTGGTGCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | ACGGGCCTGACTGCCTCTTCCACAGGACACAGAGCATaGGGTCCACGATCCATGGCGCCACTGTGCTGCCCT | + |
Preference number: 6 (lower is better) Translates to: TGLTASSTGHRA*GPRSMAPLCCP Trigger: AGGGCAGCACAGTGGCGCCATGGATCGTGGACCCCATGCTCTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | ACGCCAGCACTGCCGCTGCCCCTGAGGCCGGGTGGATaGATCACACATGTCTTCAGACACTCGACCAGTGCC | + |
Preference number: 6 (lower is better) Translates to: TPALPLPLRPGG*ITHVFRHSTSA Trigger: GGCACTGGTCGAGTGTCTGAAGACATGTGTGATCCATCCACCCGGCCTCAGGGGCAGCGGCAGTGCTGGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | CGTGGCTCGGGCCGGTCACAGAGCCGGGCTGTGCTCTaGATTCCACCTCCGCATGTCCTTGAACACGAGCTG | + |
Preference number: 6 (lower is better) Translates to: RGSGRSQSRAVL*IPPPHVLEHEL Trigger: CAGCTCGTGTTCAAGGACATGCGGAGGTGGAATCAAGAGCACAGCCCGGCTCTGTGACCGGCCCGAGCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | GTGGCTCGGGCCGGTCACAGAGCCGGGCTGTGCTCTTaGTTCCACCTCCGCATGTCCTTGAACACGAGCTGT | + |
Preference number: 6 (lower is better) Translates to: VARAGHRAGLCS*FHLRMSLNTSC Trigger: ACAGCTCGTGTTCAAGGACATGCGGAGGTGGAATCAAGAGCACAGCCCGGCTCTGTGACCGGCCCGAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TTCTGCTGGGAACGTGGCTTGGCTGCTCAGAGGAGCTaGGAGCTCGGCTGTATAAGGGTGGGCAGGCTGCCA | + |
Preference number: 6 (lower is better) Translates to: FCWERGLAAQRS*ELGCIRVGRLP Trigger: TGGCAGCCTGCCCACCCTTATACAGCCGAGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | CCATCTGCCAGCGGCATGTGCTGTGTGCGACAGCCCTaGTGGACGCCTTCTGCACTCGTGCACCACAGACGT | + |
Preference number: 6 (lower is better) Translates to: PSASGMCCVRQP*WTPSALVHHRR Trigger: ACGTCTGTGGTGCACGAGTGCAGAAGGCGTCCACAAGGGCTGTCGCACACAGCACATGCCGCTGGCAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CCTGTCGTGGGTGGAAACGAACTTCCCAGGACCCAGTaGGAAGGAGCGAGATCGGGCAGAGCAACCCGGTCA | + |
Preference number: 6 (lower is better) Translates to: PVVGGNELPRTQ*EGARSGRATRS Trigger: TGACCGGGTTGCTCTGCCCGATCTCGCTCCTTCTCACTGGGTCCTGGGAAGTTCGTTTCCACCCACGACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CATGAGCATCCCGGCAGCTCACATAACGGGCCTGACTaGCTCTTCCACAGGACACAGAGCATGGGGTCCACG | + |
Preference number: 6 (lower is better) Translates to: HEHPGSSHNGPD*LFHRTQSMGST Trigger: CGTGGACCCCATGCTCTGTGTCCTGTGGAAGAGGCAGTCAGGCCCGTTATGTGAGCTGCCGGGATGCTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | AATGCCGGTTCTGGGGAAACACGTCTCCGAACTCATTaGCCCGCGTGGGGGTCACCACTTCGTAGGAGGCCA | + |
Preference number: 6 (lower is better) Translates to: NAGSGETRLRTH*PAWGSPLRRRP Trigger: TGGCCTCCTACGAAGTGGTGACCCCCACGCGGGTCAATGAGTTCGGAGACGTGTTTCCCCAGAACCGGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | ATTCCAGTGCGGACAAGGTCCGGAGCCACAGTGCCTTaGCTCTGGGGGCTTGGAGGACCCATCACAGGAAGT | + |
Preference number: 6 (lower is better) Translates to: IPVRTRSGATVP*LWGLGGPITGS Trigger: ACTTCCTGTGATGGGTCCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCCGGACCTTGTCCGCACTGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | ACTCACTCGTTGCCCAGCTGGGACACGGAAATTCATTaGAGTTCTCCAGCACCACCCGCGGAAGCTCCCGAC | + |
Preference number: 6 (lower is better) Translates to: THSLPSWDTEIH*SSPAPPAEAPD Trigger: GTCGGGAGCTTCCGCGGGTGGTGCTGGAGAACTGCAATGAATTTCCGTGTCCCAGCTGGGCAACGAGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CAGCACGCATCTGATATCCATGTCCACAGGTGGCCGTaGAAGACCCCCACGGTCCTACATGCCAAGAAGCGC | + |
Preference number: 6 (lower is better) Translates to: QHASDIHVHRWP*KTPTVLHAKKR Trigger: GCGCTTCTTGGCATGTAGGACCGTGGGGGTCTTGCACGGCCACCTGTGGACATGGATATCAGATGCGTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | ACATGTCTTCAGACACTCGACCAGTGCCTCTCAGCCTaGAGTACACCTCCCTCTGCTGCACCCCTGACCCAC | + |
Preference number: 6 (lower is better) Translates to: TCLQTLDQCLSA*STPPSAAPLTH Trigger: GTGGGTCAGGGGTGCAGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTGGTCGAGTGTCTGAAGACATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | CACGCACGGAGCTCACAGGGTCTCAGCGACTCGGGCTaGGTACTGGCATTACAGAAACCATCCCTCATGGGG | + |
Preference number: 6 (lower is better) Translates to: HARSSQGLSDSG*VLALQKPSLMG Trigger: CCCCATGAGGGATGGTTTCTGTAATGCCAGTACCAAGCCCGAGTCGCTGAGACCCTGTGAGCTCCGTGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | AATTCCAGTGCGGACAAGGTCCGGAGCCACAGTGCCTaGACTCTGGGGGCTTGGAGGACCCATCACAGGAAG | + |
Preference number: 6 (lower is better) Translates to: NSSADKVRSHSA*TLGAWRTHHRK Trigger: CTTCCTGTGATGGGTCCTCCAAGCCCCCAGAGTCAAGGCACTGTGGCTCCGGACCTTGTCCGCACTGGAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | GTAGGAGGCCAGAGTCTTCACCAGGGCTTCCTGTCGTaGGTGGAAACGAACTTCCCAGGACCCAGTGAGAAG | + |
Preference number: 6 (lower is better) Translates to: VGGQSLHQGFLS*VETNFPGPSEK Trigger: CTTCTCACTGGGTCCTGGGAAGTTCGTTTCCACCCACGACAGGAAGCCCTGGTGAAGACTCTGGCCTCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | CCGGAGCTACGTTTCTTCCGGCTGAAATGCCGGTTCTaGGGAAACACGTCTCCGAACTCATTGACCCGCGTG | + |
Preference number: 6 (lower is better) Translates to: PELRFFRLKCRF*GNTSPNSLTRV Trigger: CACGCGGGTCAATGAGTTCGGAGACGTGTTTCCCCAGAACCGGCATTTCAGCCGGAAGAAACGTAGCTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | ACGCACGGAGCTCACAGGGTCTCAGCGACTCGGGCTTaGTACTGGCATTACAGAAACCATCCCTCATGGGGT | + |
Preference number: 6 (lower is better) Translates to: THGAHRVSATRA*YWHYRNHPSWG Trigger: ACCCCATGAGGGATGGTTTCTGTAATGCCAGTACCAAGCCCGAGTCGCTGAGACCCTGTGAGCTCCGTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CGATACCAGGACACATCTTCAGGGCAGGCGTGCAGGTaGCACTGCATCATGCTAGGTGGCTTGGGCAGTTCA | + |
Preference number: 6 (lower is better) Translates to: RYQDTSSGQACR*HCIMLGGLGSS Trigger: TGAACTGCCCAAGCCACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCCTGAAGATGTGTCCTGGTATCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CACACTTGTGATCCAGGGCCAAACATGAGCTCACACTaGCTGTTCCCATCGTACACGGAGCCCGGAAGCTGT | + |
Preference number: 6 (lower is better) Translates to: HTCDPGPNMSSH*LFPSYTEPGSC Trigger: ACAGCTTCCGGGCTCCGTGTACGATGGGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGATCACAAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | ACGTCAGGGTTGTATAAATTACCCACACACAACACCTaGAGAACGAGCTCCGCCTCCAGCCGGTCCGTGCTG | + |
Preference number: 6 (lower is better) Translates to: TSGLYKLPTHNT*RTSSASSRSVL Trigger: CAGCACGGACCGGCTGGAGGCGGAGCTCGTTCTGCAGGTGTTGTGTGTGGGTAATTTATACAACCCTGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TCGTCGTGTGGAACATTAAACACGTGTCCAAGCTCATaGGCGATGGTGAAGGCGGCGCTCAGCCCGTTCTCT | + |
Preference number: 6 (lower is better) Translates to: SSCGTLNTCPSS*AMVKAALSPFS Trigger: AGAGAACGGGCTGAGCGCCGCCTTCACCATCGCCCATGAGCTTGGACACGTGTTTAATGTTCCACACGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | GGAGCTCACAGGGTCTCAGCGACTCGGGCTTGGTACTaGCATTACAGAAACCATCCCTCATGGGGTCTTCAC | + |
Preference number: 6 (lower is better) Translates to: GAHRVSATRAWY*HYRNHPSWGLH Trigger: GTGAAGACCCCATGAGGGATGGTTTCTGTAATGCCAGTACCAAGCCCGAGTCGCTGAGACCCTGTGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | AGGGCAGGCGTGCAGGTGACACTGCATCATGCTAGGTaGCTTGGGCAGTTCACAGCTGTGTTCCTGTGTCAT | + |
Preference number: 6 (lower is better) Translates to: RAGVQVTLHHAR*LGQFTAVFLCH Trigger: ATGACACAGGAACACAGCTGTGAACTGCCCAAGCCACCTAGCATGATGCAGTGTCACCTGCACGCCTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | GAACCCTCCGCATCTGCCGTAGACTTTGGTTCCGTCTaGGGACCTGTGGATGATGACAGAGGCATACCTCCC | + |
Preference number: 6 (lower is better) Translates to: EPSASAVDFGSV*GPVDDDRGIPP Trigger: GGGAGGTATGCCTCTGTCATCATCCACAGGTCCCAAGACGGAACCAAAGTCTACGGCAGATGCGGAGGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 72 bp | CCACACTTGTCTCTCTTGGCCTTGGAGTTTAACACGTaGTCACAGCCAGCTTGCCGACAGAGGCCCTGGACA | + |
Preference number: 6 (lower is better) Translates to: PHLSLLALEFNT*SQPACRQRPWT Trigger: TGTCCAGGGCCTCTGTCGGCAAGCTGGCTGTGATCACGTGTTAAACTCCAAGGCCAAGAGAGACAAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | TGGATGGATCACACATGTCTTCAGACACTCGACCAGTaGCTCTCAGCCTGCAGTACACCTCCCTCTGCTGCA | + |
Preference number: 6 (lower is better) Translates to: WMDHTCLQTLDQ*LSACSTPPSAA Trigger: TGCAGCAGAGGGAGGTGTACTGCAGGCTGAGAGGCACTGGTCGAGTGTCTGAAGACATGTGTGATCCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 72 bp | TCAAGTAGGGACACACTTGTGATCCAGGGCCAAACATaGGCTCACACTGCCTGTTCCCATCGTACACGGAGC | + |
Preference number: 6 (lower is better) Translates to: SSRDTLVIQGQT*AHTACSHRTRS Trigger: GCTCCGTGTACGATGGGAACAGGCAGTGTGAGCTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTACTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CAGACGTCGGCAGTGCTTCAAGTAGGGACACACTTGTaGTCCAGGGCCAAACATGAGCTCACACTGCCTGTT | + |
Preference number: 6 (lower is better) Translates to: QTSAVLQVGTHL*SRAKHELTLPV Trigger: AACAGGCAGTGTGAGCTCATGTTTGGCCCTGGATCACAAGTGTGTCCCTACTTGAAGCACTGCCGACGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | AGCAGGTCGAGGCAAGTGGGCACAATTCGACTCATCTaGCACTTCATCATGAGCATCCCGGCAGCTCACATA | + |
Preference number: 6 (lower is better) Translates to: SRSRQVGTIRLI*HFIMSIPAAHI Trigger: TATGTGAGCTGCCGGGATGCTCATGATGAAGTGGCAGATGAGTCGAATTGTGCCCACTTGCCTCGACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | GTTAATGGAACATTTCTGCTGGGAACGTGGCTTGGCTaGTCAGAGGAGCTGGGAGCTCGGCTGTATAAGGGT | + |
Preference number: 6 (lower is better) Translates to: VNGTFLLGTWLG*SEELGARLYKG Trigger: ACCCTTATACAGCCGAGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAATGTTCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | TGTGAGGAATGCACTTTCCACAGAACCCTCCGCATCTaGCGTAGACTTTGGTTCCGTCTTGGGACCTGTGGA | + |
Preference number: 6 (lower is better) Translates to: CEECTFHRTLRI*RRLWFRLGTCG Trigger: TCCACAGGTCCCAAGACGGAACCAAAGTCTACGGCAGATGCGGAGGGTTCTGTGGAAAGTGCATTCCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 72 bp | CGGGCTTGGTACTGGCATTACAGAAACCATCCCTCATaGGGTCTTCACTCAGCTGACACCAAACCTGTCGCT | + |
Preference number: 6 (lower is better) Translates to: RAWYWHYRNHPS*GLHSADTKPVA Trigger: AGCGACAGGTTTGGTGTCAGCTGAGTGAAGACCCCATGAGGGATGGTTTCTGTAATGCCAGTACCAAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | CTGACCCACAGGTCACAGAGCACTCCTTCCATTTATTaGCCTTCCATGAAGGGCATCGTCCCGATCTGCAAG | + |
Preference number: 6 (lower is better) Translates to: LTHRSQSTPSIY*PSMKGIVPICK Trigger: CTTGCAGATCGGGACGATGCCCTTCATGGAAGGCCAATAAATGGAAGGAGTGCTCTGTGACCTGTGGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | CCTGACCCACAGGTCACAGAGCACTCCTTCCATTTATaGGCCTTCCATGAAGGGCATCGTCCCGATCTGCAA | + |
Preference number: 6 (lower is better) Translates to: PDPQVTEHSFHL*AFHEGHRPDLQ Trigger: TTGCAGATCGGGACGATGCCCTTCATGGAAGGCCAATAAATGGAAGGAGTGCTCTGTGACCTGTGGGTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS TCA 72 bp | ACCAAACCTGTCGCTGCTTCATTCCTTTTCCACATGTaGCAGGACACTCACTCCACTCACTCGTTGCCCAGC | + |
Preference number: 6 (lower is better) Translates to: TKPVAASFLFHM*QDTHSTHSLPS Trigger: GCTGGGCAACGAGTGAGTGGAGTGAGTGTCCTGTCACATGTGGAAAAGGAATGAAGCAGCGACAGGTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CACATTGTAACCGTAATGGGCACTGTTGAAGACACCTaGCAGGGTCTGGCACGAAGAGTTGTCACCACCACA | + |
Preference number: 6 (lower is better) Translates to: HIVTVMGTVEDT*QGLARRVVTTT Trigger: TGTGGTGGTGACAACTCTTCGTGCCAGACCCTGGCAGGTGTCTTCAACAGTGCCCATTACGGTTACAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | AATATACAGTCCTGTCTGTCACTTGGCCGGCTGGCTTaGGGGCACTCTCTGTCATCTAGCATGGTGCCAAAT | + |
Preference number: 6 (lower is better) Translates to: NIQSCLSLGRLA*GHSLSSSMVPN Trigger: ATTTGGCACCATGCTAGATGACAGAGAGTGCCCGCAAGCCAGCCGGCCAAGTGACAGACAGGACTGTATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TCTCTCCTGGTTTGTGAGTTAATGGAACATTTCTGCTaGGAACGTGGCTTGGCTGCTCAGAGGAGCTGGGAG | + |
Preference number: 6 (lower is better) Translates to: SLLVCELMEHFC*ERGLAAQRSWE Trigger: CTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAATGTTCCATTAACTCACAAACCAGGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | TGTGAGTTAATGGAACATTTCTGCTGGGAACGTGGCTaGGCTGCTCAGAGGAGCTGGGAGCTCGGCTGTATA | + |
Preference number: 6 (lower is better) Translates to: CELMEHFCWERG*AAQRSWELGCI Trigger: TATACAGCCGAGCTCCCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAATGTTCCATTAACTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 90 bp | AGCTCCGCCTCCAGCCGGTCCGTGCTGTTAATTCTTTCAATCGAGTaGTTTGACCCGCTGTATTCGAAAACAGCACCCTGGATGTTGATC | + |
Preference number: 6 (lower is better) Translates to: SSASSRSVLLILSIE*FDPLYSKTAPWMLI Trigger: GATCAACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGATTGAAAGAATTAACAGCACGGACCGGCTGGAGGCGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | GGTCACAGAGCACTCCTTCCATTTATTGGCCTTCCATaGAGGGCATCGTCCCGATCTGCAAGCTTTGTGAGT | + |
Preference number: 6 (lower is better) Translates to: GHRALLPFIGLP*RASSRSASFVS Trigger: ACTCACAAAGCTTGCAGATCGGGACGATGCCCTTCATGGAAGGCCAATAAATGGAAGGAGTGCTCTGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS GCA 72 bp | GATTCTCTCCTGGTTTGTGAGTTAATGGAACATTTCTaGTGGGAACGTGGCTTGGCTGCTCAGAGGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: DSLLVCELMEHF*WERGLAAQRSW Trigger: CCAGCTCCTCTGAGCAGCCAAGCCACGTTCCCAGCAGAAATGTTCCATTAACTCACAAACCAGGAGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | CCGGAAGCTGTGGAGACAGGTCATATGTTCTCCCGTTaGGTTTGTCAAGAAGGCATTCTCCATGACCAGTGT | + |
Preference number: 6 (lower is better) Translates to: PEAVETGHMFSR*VCQEGILHDQC Trigger: ACACTGGTCATGGAGAATGCCTTCTTGACAAACCCAACGGGAGAACATATGACCTGTCTCCACAGCTTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TTGGCACATTTTGGTACAGTCTTGCCACGGCCCGTATaGATCCCAGGAGAACAGATTGCTCCTCTCCTCAAT | + |
Preference number: 6 (lower is better) Translates to: LAHFGTVLPRPV*IPGEQIAPLLN Trigger: ATTGAGGAGAGGAGCAATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CCAAATATCTCACTGATACACTTAACAGCACGCATCTaGTATCCATGTCCACAGGTGGCCGTGCAAGACCCC | + |
Preference number: 6 (lower is better) Translates to: PNISLIHLTARI*YPCPQVAVQDP Trigger: GGGGTCTTGCACGGCCACCTGTGGACATGGATATCAGATGCGTGCTGTTAAGTGTATCAGTGAGATATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | TCCAGCCGGTCCGTGCTGTTAATTCTTTCAATCGAGTaGTTTGACCCGCTGTATTCGAAAACAGCACCCTGG | + |
Preference number: 6 (lower is better) Translates to: SSRSVLLILSIE*FDPLYSKTAPW Trigger: CCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGATTGAAAGAATTAACAGCACGGACCGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | AGGCAATTTTTCTTCTATGAAGACCTTGGCACATTTTaGTACAGTCTTGCCACGGCCCGTATGGATCCCAGG | + |
Preference number: 6 (lower is better) Translates to: RQFFFYEDLGTF*YSLATARMDPR Trigger: CCTGGGATCCATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGAAAAATTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | GGGCATCTGGCTTTAAACGCTTTAAACATAAGTCACTaGGCCAACCGTTCTCAGTCCTGCATGCTACTCTTC | + |
Preference number: 6 (lower is better) Translates to: GHLALNALNISH*ANRSQSCMLLF Trigger: GAAGAGTAGCATGCAGGACTGAGAACGGTTGGCCCAGTGACTTATGTTTAAAGCGTTTAAAGCCAGATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | TCTTCTATGAAGACCTTGGCACATTTTGGTACAGTCTaGCCACGGCCCGTATGGATCCCAGGAGAACAGATT | + |
Preference number: 6 (lower is better) Translates to: SSMKTLAHFGTV*PRPVWIPGEQI Trigger: AATCTGTTCTCCTGGGATCCATACGGGCCGTGGCAAGACTGTACCAAAATGTGCCAAGGTCTTCATAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 90 bp | CAGTCGCTTTTCCCAATGATGTGCCACCTGAGTTCACAGTCCATATaGCACTTTTCAGTCACAAACAGTGGCATCGGTAAGTGGCCACAA | + |
Preference number: 6 (lower is better) Translates to: QSLFPMMCHLSSQSI*HFSVTNSGIGKWPQ Trigger: TTGTGGCCACTTACCGATGCCACTGTTTGTGACTGAAAAGTGCAATATGGACTGTGAACTCAGGTGGCACATCATTGGGAAAAGCGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CCGGTCCGTGCTGTTAATTCTTTCAATCGAGTTGTTTaGCCCGCTGTATTCGAAAACAGCACCCTGGATGTT | + |
Preference number: 6 (lower is better) Translates to: PVRAVNSFNRVV*PAVFENSTLDV Trigger: AACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGATTGAAAGAATTAACAGCACGGACCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | GACATGAATCAGTATTACATGATCGAAATTTCATCCTaGGGCCCACACAGTACCTTCCTCCGTTTCGTGGCT | + |
Preference number: 6 (lower is better) Translates to: DMNQYYMIEISS*GPHSTFLRFVA Trigger: AGCCACGAAACGGAGGAAGGTACTGTGTGGGCCGCAGGATGAAATTTCGATCATGTAATACTGATTCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | TTGCACTTTTCAGTCACAAACAGTGGCATCGGTAAGTaGCCACAATTGTGGTCAGATACAACTGCATGGTCG | + |
Preference number: 6 (lower is better) Translates to: LHFSVTNSGIGK*PQLWSDTTAWS Trigger: CGACCATGCAGTTGTATCTGACCACAATTGTGGCCACTTACCGATGCCACTGTTTGTGACTGAAAAGTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | CTGAGAGGGCAAAGCAGTTTTCTCCATTTGATTTTCTaGAACTTCACAAGGCTTGTGAGACCGCGCAAAGGA | + |
Preference number: 6 (lower is better) Translates to: LRGQSSFLHLIF*NFTRLVRPRKG Trigger: TCCTTTGCGCGGTCTCACAAGCCTTGTGAAGTTTCAGAAAATCAAATGGAGAAAACTGCTTTGCCCTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | AGGAGAACAGATTGCTCCTCTCCTCAATGGGGATGTTaGAGGAATAGCGCACGTCAGGGTTGTATAAATTAC | + |
Preference number: 6 (lower is better) Translates to: RRTDCSSPQWGC*RNSARQGCINY Trigger: GTAATTTATACAACCCTGACGTGCGCTATTCCTTCAACATCCCCATTGAGGAGAGGAGCAATCTGTTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | TTAAACATAAGTCACTGGGCCAACCGTTCTCAGTCCTaGATGCTACTCTTCTCTCCATTATCCCAATTCCAC | + |
Preference number: 6 (lower is better) Translates to: LNISHWANRSQS*MLLFSPLSQFH Trigger: GTGGAATTGGGATAATGGAGAGAAGAGTAGCATGCAGGACTGAGAACGGTTGGCCCAGTGACTTATGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CCA 72 bp | TATTCTCTAGGGTTCTCCAGCTGCATGCCTGAGCAATaGATCTTCAATATTCTTCCCCTGACGTTAAGGTCA | + |
Preference number: 6 (lower is better) Translates to: YSLGFSSCMPEQ*IFNILPLTLRS Trigger: TGACCTTAACGTCAGGGGAAGAATATTGAAGATCCATTGCTCAGGCATGCAGCTGGAGAACCCTAGAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | AGGACTGGTTCTAAGAAATACTCCCCATCATTTGCTTaGAATGTCCCCATCAGTCCTCCACAGAGACTGAAG | + |
Preference number: 6 (lower is better) Translates to: RTGSKKYSPSFA*NVPISPPQRLK Trigger: CTTCAGTCTCTGTGGAGGACTGATGGGGACATTCAAAGCAAATGATGGGGAGTATTTCTTAGAACCAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS GCA 72 bp | CGAAGTCGGAGCATTGCTTTTCTCGGAAGTCTCGCTTaGCTTTTGGACATGAATCAGTATTACATGATCGAA | + |
Preference number: 6 (lower is better) Translates to: RSRSIAFLGSLA*LLDMNQYYMIE Trigger: TTCGATCATGTAATACTGATTCATGTCCAAAAGGCAAGCGAGACTTCCGAGAAAAGCAATGCTCCGACTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | TCGAAGTCGGAGCATTGCTTTTCTCGGAAGTCTCGCTaGCCTTTTGGACATGAATCAGTATTACATGATCGA | + |
Preference number: 6 (lower is better) Translates to: SKSEHCFSRKSR*PFGHESVLHDR Trigger: TCGATCATGTAATACTGATTCATGTCCAAAAGGCAAGCGAGACTTCCGAGAAAAGCAATGCTCCGACTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | GAAAGCGGCTTCGTTAAAGGGTCACAGAGACTTTCATaGGCTTGTACGTTTTGCTCATTCACACATTTCACC | + |
Preference number: 6 (lower is better) Translates to: ESGFVKGSQRLS*ACTFCSFTHFT Trigger: GGTGAAATGTGTGAATGAGCAAAACGTACAAGCCAATGAAAGTCTCTGTGACCCTTTAACGAAGCCGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 90 bp | ATCGAGTTGTTTGACCCGCTGTATTCGAAAACAGCACCCTGGATGTaGATCTCTTTCTTCGCCATACTTACAACAAAGTTTCCATTCAGG | + |
Preference number: 6 (lower is better) Translates to: IELFDPLYSKTAPWM*ISFFAILTTKFPFR Trigger: CCTGAATGGAAACTTTGTTGTAAGTATGGCGAAGAAAGAGATCAACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAAACAACTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS TCA 72 bp | TTGACCCGCTGTATTCGAAAACAGCACCCTGGATGTTaGTCTCTTTCTTCGCCATACTTACAACAAAGTTTC | + |
Preference number: 6 (lower is better) Translates to: LTRCIRKQHPGC*SLSSPYLQQSF Trigger: GAAACTTTGTTGTAAGTATGGCGAAGAAAGAGATCAACATCCAGGGTGCTGTTTTCGAATACAGCGGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CCA 72 bp | AAAGCGGCTTCGTTAAAGGGTCACAGAGACTTTCATTaGCTTGTACGTTTTGCTCATTCACACATTTCACCA | + |
Preference number: 6 (lower is better) Translates to: KAASLKGHRDFH*LVRFAHSHISP Trigger: TGGTGAAATGTGTGAATGAGCAAAACGTACAAGCCAATGAAAGTCTCTGTGACCCTTTAACGAAGCCGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |
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CDS CAA 72 bp | TCATTTGGCCATTGGGAAACTGACAGATCACAAATCTaGATTTTACCCCTCCACCACAGGTTTGTGTGCATT | + |
Preference number: 6 (lower is better) Translates to: SFGHWETDRSQI*ILPLHHRFVCI Trigger: AATGCACACAAACCTGTGGTGGAGGGGTAAAATCAAGATTTGTGATCTGTCAGTTTCCCAATGGCCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035342.11 ENSMUST00000155907.2 |
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CDS CAA 72 bp | CTAAGGCCGTATATTTCTGAAAAGTTGTCTTCACTTTaGACCAGTGGTAAATATTCTCTAGGGTTCTCCAGC | + |
Preference number: 6 (lower is better) Translates to: LRPYISEKLSSL*TSGKYSLGFSS Trigger: GCTGGAGAACCCTAGAGAATATTTACCACTGGTCAAAAGTGAAGACAACTTTTCAGAAATATACGGCCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035342.11 |