RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053441

Ensembl transcript IDs: ENSMUST00000052907.7

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCACACATCCCCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTaGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGG +
Preference number: 1 (lower is better)
Translates to: SAHIPLALQRPSVSL*LTLQASCSEYFRTG
Trigger: CCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGGGGATGTGTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 90 bp GAGAACCTGAACATGTTAGGACTTGAAGTCAGCACACATCCCCCTTaGTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGC +
Preference number: 1 (lower is better)
Translates to: ENLNMLGLEVSTHPP*SPETFCLPVAHSAS
Trigger: GCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGGGGATGTGTGCTGACTTCAAGTCCTAACATGTTCAGGTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 90 bp TCCTGCAGTGAATACTTCAGAACAGGGGCAGACAATGCCTCTTCTTaGCAAGTGTGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SCSEYFRTGADNASS*QVWIRGQPCEELSS
Trigger: GGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCACACTTGGCAAGAAGAGGCATTGTCTGCCCCTGTTCTGAAGTATTCACTGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR TCA 90 bp CACTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTaGTTCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGT +
Preference number: 1 (lower is better)
Translates to: HFRHSFSTPSPTAQW*FSVHRYSASGSQCC
Trigger: ACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR CCA 90 bp GAATACTTCAGAACAGGGGCAGACAATGCCTCTTCTTGCCAAGTGTaGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAG +
Preference number: 1 (lower is better)
Translates to: EYFRTGADNASSCQV*IRGQPCEELSSQRK
Trigger: CTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCACACTTGGCAAGAAGAGGCATTGTCTGCCCCTGTTCTGAAGTATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 90 bp ACCTTCACCAACAGCGCAATGGTGATTCAGTGTACATCGATACAGTaGATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTTCACCAACA +
Preference number: 1 (lower is better)
Translates to: TFTNSAMVIQCTSIQ*IRLTVLCSSACSPT
Trigger: TGTTGGTGAACATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGAATCACCATTGCGCTGTTGGTGAAGGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 90 bp GTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTaGATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCA +
Preference number: 1 (lower is better)
Translates to: VYIDTVHQAHSAVFK*MFTNRIKVSVLTFP
Trigger: TGGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR-3UTR GCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTGACAATGCCTCTTCTTaGCAAGTGTGGATACGTGGA +
Preference number: 2 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPDNASS*QVWIRG
Trigger: TCCACGTATCCACACTTGGCAAGAAGAGGCATTGTC...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR-3UTR GCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGAAAATGGGCAGATTCTaGAGCAGGACACAAGAAAAT +
Preference number: 2 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMKMGRF*SRTQEN
Trigger: ATTTTCTTGTGTCCTGCTGCAGAATCTGCCCATTTT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR-3UTR CCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTACCACATTAGATGCCTaGCAGGCAAATAAATTAATT +
Preference number: 2 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFTTLDA*QANKLI
Trigger: AATTAATTTATTTGCCTGCCAGGCATCTAATGTGGT...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 72 bp CCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTaGAGTGAATACTTCAGAACAGGGGCAGACAATGCC +
Preference number: 3 (lower is better)
Translates to: PSVSLWLTLQAS*SEYFRTGADNA
Trigger: GGCATTGTCTGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 72 bp AACATGTTAGGACTTGAAGTCAGCACACATCCCCCTTaGTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: NMLGLEVSTHPP*SPETFCLPVAH
Trigger: GTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGGGGATGTGTGCTGACTTCAAGTCCTAACATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR TCA 72 bp CACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTaGTTCAGTGTACATCGATACAGTGCATCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: HSFSTPSPTAQW*FSVHRYSASGS
Trigger: TGAGCCTGATGCACTGTATCGATGTACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR GCA 72 bp AACAGCGCAATGGTGATTCAGTGTACATCGATACAGTaGATCAGGCTCACAGTGCTGTGTTCAAGTGCATGT +
Preference number: 3 (lower is better)
Translates to: NSAMVIQCTSIQ*IRLTVLCSSAC
Trigger: ACATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGAATCACCATTGCGCTGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
3UTR CCA 72 bp TCCTCTTTCATAAGACTGCTAGGGGATGGAAAGATCTaGGTGGATCCATGTTTTCTCTGTTTGAAATACCTT +
Preference number: 3 (lower is better)
Translates to: SSFIRLLGDGKI*VDPCFLCLKYL
Trigger: AAGGTATTTCAAACAGAGAAAACATGGATCCACCCAGATCTTTCCATCCCCTAGCAGTCTTATGAAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAGCGCTGGGTTCCTCTTaGTGGGCAGGGGGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAALGSS*WAGGGD
Trigger: GTCCCCGCCCCCTGCCCAGCAAGAGGAACCCAGCGC...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTAGTCCTCGGCCTCCCTaGGTCTGGTGGAGAGGACGC +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPSPRPP*VWWRGR
Trigger: GCGTCCTCTCCACCAGACCCAGGGAGGCCGAGGACT...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTGTCAGTCCCATCCATTaGTGGGTCCAGCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPVSPIH*WVQLGP
Trigger: AGGACCAAGCTGGACCCACCAATGGATGGGACTGAC...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTGACATTGCCAGTCTCTaGATCCAGGCAAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPDIASL*IQANLQ
Trigger: CTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTC...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGGTCTCCCAGGCACTTaGAGGTCAGGGCAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIGLPGT*RSGQPV
Trigger: GACTGGCTGCCCTGACCTTCAAGTGCCTGGGAGACC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTCGGGTGCAGGAGTCCTaGGGGTGCATTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCRVQES*GCILQP
Trigger: AGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCG...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTGGCTCCTTAGAACTCTaGTTGTCTGGAAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPGSLEL*LSGRGS
Trigger: AGACCCTCTTCCAGACAATCAGAGTTCTAAGGAGCC...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAAGATCCGGGGTGAGCTaGAACCCTGAGGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIRSGVS*NPEVVP
Trigger: TGGGACCACCTCAGGGTTGCAGCTCACCCCGGATCT...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAGGGCTGAAGGTGACATaGCCTGTAGGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAGLKVT*PVGCRF
Trigger: AAACCTGCAGCCTACAGGCCATGTCACCTTCAGCCC...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTTCCGTGTCTTCCTGTaGTCTTATGCATGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPFRVFL*SYACTG
Trigger: TCCAGTGCATGCATAAGATCACAGGAAGACACGGAA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGCAATCGCCCCAGCCTaGGTGTGTCCACATGAAGAG +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIAIAPA*VCPHEE
Trigger: CTCTTCATGTGGACACACGCAGGCTGGGGCGATTGC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTACATGGCCTGTAGGCTaGAGGTTTCTCCGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPTWPVG*RFLRRK
Trigger: TTTTCTTCGGAGAAACCTGCAGCCTACAGGCCATGT...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATACAGATTGGCCTCTGGTaGCTTCTTCCTGCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIQIGLW*LLPAVL
Trigger: GAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTG...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTCACAACCAGCTTTCTaGCACCTGCCATTTGCACAT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPSQPAF*HLPFAH
Trigger: ATGTGCAAATGGCAGGTGCCAGAAAGCTGGTTGTGA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTATGGCGGTGAACAGCTaGGTTCTCTGTTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPMAVNS*VLCYFF
Trigger: GAAAAAGTAACAGAGAACTCAGCTGTTCACCGCCAT...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTTCCTTTATCTGAAATaGCACCACAGTGATGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPFLYLK*HHSDGG
Trigger: ACCGCCATCACTGTGGTGTCATTTCAGATAAAGGAA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTTAGGATTGTCAGAATaGATCTCCTGGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPLGLSE*ISWLHL
Trigger: CAGATGCAGCCAGGAGATTCATTCTGACAATCCTAA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTCCATTCACCAGACATaGTATGAAGACCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPSIHQT*YEDHQH
Trigger: GTGCTGATGGTCTTCATATCATGTCTGGTGAATGGA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTGCGCTCTCGACTGCTaGCCCCAGAACTGCAACTTC +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMCALDC*PQNCNF
Trigger: GAAGTTGCAGTTCTGGGGTCAGCAGTCGAGAGCGCA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAAACCAGGGCTCAGATTaGCCTCTGGTGGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRINQGSD*PLVASS
Trigger: GGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTT...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCACCATTTTCCAGCTGCTaGGTACAGGCCACTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAPFSSC*VQATCL
Trigger: TAGACAAGTGGCCTGTACCCAGCAGCTGGAAAATGG...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCACTGCGAAGCGCTaGGCCAGGAAGCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFSTAKR*ARKRPS
Trigger: AGATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGA...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGCTTGGTCCTGCACTCTaGTTCCCCCTCCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMLGPAL*FPLHFA
Trigger: TGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAG...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTCCAGCCAGACTGAATaGTCCAGAATGTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPSSQTE*SRMFYL
Trigger: AAGATAGAACATTCTGGAGCATTCAGTCTGGCTGGA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAACCATCAGCACAGGATaGGTGGTCATTGTCATGGTT +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGATISTG*VVIVMV
Trigger: AACCATGACAATGACCACCCATCCTGTGCTGATGGT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAGCACTTTCGAATCTGTaGCTCTGGTTTGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAALSNL*LWFGQV
Trigger: GACTTGACCAAACCAGAGCCACAGATTCGAAAGTGC...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCTCCCGGCGCCAGAGTaGAGGAAACACGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSLPAPE*RKHDFP
Trigger: TGGGAAGTCGTGTTTCCTGCACTCTGGCGCCGGGAG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGCTCTGCGGATCTGTATaGAACAAGCAGCTACTGGCC +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMLCGSV*NKQLLA
Trigger: GGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAG...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGGTCCAGCTTGGTCCTaGACTCTGCTTCCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSGPAWS*TLLPPP
Trigger: TGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCESRQT*RTRWIL
Trigger: GAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTC...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAAGGAGTACCAGGAGATaGAAAGGTGTGGTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIRSTRR*KGVVVG
Trigger: TCCCACAACCACACCTTTGCATCTCCTGGTACTCCT...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTCCTCCTTGCTGCACCTaGACCATGAAACATCACCAA +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCPPCCT*TMKHHQ
Trigger: TTGGTGATGTTTCATGGTCCAGGTGCAGCAAGGAGG...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTTATAAACGGTGCGGGTaGCCTATGATGGCCATTGTA +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCYKRCG*PMMAIV
Trigger: TACAATGGCCATCATAGGTCACCCGCACCGTTTATA...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGAAGACAGCTTGCCACTaGAGTGCATGCTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMKTACH*SACFGY
Trigger: GTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTTTTCCTCCACAACTTTaGTTCTTCTCGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCFPPQL*FFSLQQ
Trigger: CTGCTGGAGCGAGAAGAATCAAAGTTGTGGAGGAAA...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTTTTTCCACAGGTTCGTaGACACGTGGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCFSTGS*TRGPFC
Trigger: ACAGAATGGACCACGTGTTCACGAACCTGTGGAAAA...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTACCGTCATGCAGTCCTaGCCCTCACAGCGTTGCACA +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFTVMQS*PSQRCT
Trigger: TGTGCAACGCTGTGAGGGTCAGGACTGCATGACGGT...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGTGGTAGGAAACCATTaGAGGGTCTGCAACTACTAC +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIVVGNH*RVCNYY
Trigger: GTAGTAGTTGCAGACCCTGCAATGGTTTCCTACCAC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCAGGAGTCCTGCGGGTaGATTCTCCAGCCTTACACC +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSQESCG*ILQPYT
Trigger: GGTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGGGGCATAGAAGTCCCTaGAAGTCTCACAGCATCGTT +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMGHRSP*KSHSIV
Trigger: AACGATGCTGTGAGACTTGCAGGGACTTCTATGCCC...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTAATATACAGATCTGCTaGTGTTTCATGGAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPNIQIC*CFMEEN
Trigger: ATTCTCCTCCATGAAACACCAGCAGATCTGTATATT...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAAGCATTTTCTCTCCGTaGTGCCCAATATACAGATCT +
Preference number: 4 (lower is better)
Translates to: SLWLTLQASCSEYFRTGASIFSP*CPIYRS
Trigger: AGATCTGTATATTGGGCACCACGGAGAGAAAATGCT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATACACAATGATCTTCCCTaGCAAGAGACCCCAGTAAAC +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIHNDLP*QETPVN
Trigger: GTTTACTGGGGTCTCTTGCCAGGGAAGATCATTGTG...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTAGGTTCGTGAACACGTaGTCCATTCTGTCATCATCC +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCRFVNT*SILSSS
Trigger: GGATGATGACAGAATGGACCACGTGTTCACGAACCT...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGCCACACGTAGCATTTaGAGTAATCCTCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIATRSI*SNPHSP
Trigger: AGGACTGTGAGGATTACTCCAAATGCTACGTGTGGC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGGCTGCACCTGGACCATaGAACATCACCAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMAAPGP*NITKIL
Trigger: CAAAATCTTGGTGATGTTTCATGGTCCAGGTGCAGC...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGACATGCTGCATCTCTTaGCAAAAAGAAGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMTCCIS*QKEARG
Trigger: GCCTCTGGCTTCTTTTTGTCAAGAGATGCAGCATGT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTACACGGAGGTTGACCTaGACACCCAGACTCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFTRRLT*TPRLLC
Trigger: GCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGT...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGGCCCAAAGAGGATCTaGCACTGTTCGTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSGPKRI*HCSSAV
Trigger: CACTGCAGACGAACAGTGCCAGATCCTCTTTGGGCC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTAGTCCCATCCATTGGTaGGTCCAGCTTGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFSPIHW*VQLGPA
Trigger: TGCAGGACCAAGCTGGACCCACCAATGGATGGGACT...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGGCCACTTGTCTACTCTaGACTCCTTTTCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMATCLL*TPFPQV
Trigger: AACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGC...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCAGTACACTGGCCACTaGTCTCCCAGGCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFQYTGH*SPRHLK
Trigger: CTTCAAGTGCCTGGGAGACCAGTGGCCAGTGTACTG...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATATGGTCTTCCTTTATCTaGAATGACACCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIWSSFI*NDTTVM
Trigger: CATCACTGTGGTGTCATTTCAGATAAAGGAAGACCA...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTTCTCCTGGCTGCATCTaGTCCGTGGTAGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFSPGCI*SVVGNH
Trigger: ATGGTTTCCTACCACGGAGCAGATGCAGCCAGGAGA...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTACACCCAGACTCTTGTaGTGGAAAAGGTTAAAAACC +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCTPRLL*WKRLKT
Trigger: GGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGT...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTCTGAAGTGCATGCTTTaGGTACGAAGTTCTAACACT +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCLKCML*VRSSNT
Trigger: AGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAG...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTGGAGATGCAAAGGTGTaGTTGTGGGACCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFGDAKV*LWDLWQ
Trigger: CTGCCAAAGGTCCCACAACCACACCTTTGCATCTCC...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTCTGTGGCTCTGGTTTaGTCAAGTCCTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMSVALV*SSPCIS
Trigger: AGAAATGCAAGGACTTGACCAAACCAGAGCCACAGA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGGTCATTGTCATGGTTaGTGCCCATGTTGTGACCCA +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSGHCHG*CPCCDP
Trigger: TGGGTCACAACATGGGCATCAACCATGACAATGACC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCAATGAATCTCCTGGCTaGATCTGCTCCGTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSNESPG*ICSVVG
Trigger: TCCTACCACGGAGCAGATGCAGCCAGGAGATTCATT...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTTGCATGACTTTCCATTaGCGTTACAAACACCACAAT +
Preference number: 4 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCCMTFH*RYKHHN
Trigger: ATTGTGGTGTTTGTAACGGCAATGGAAAGTCATGCA...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGTTTGGTCAAGTCCTTaGATTTCTTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIVWSSP*ISCCPQ
Trigger: TTGTGGACAACAAGAAATGCAAGGACTTGACCAAAC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGCAAAGGTGTGGTTGTaGGACCTTTGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSAKVWL*DLWQRS
Trigger: AGATCTCTGCCAAAGGTCCCACAACCACACCTTTGC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGATCTTATGCATGCACTaGATAACACGAGACTGCATG +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMILCMH*ITRDCM
Trigger: CATGCAGTCTCGTGTTATCCAGTGCATGCATAAGAT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCGGCCAAACTCTTCGTaGTGCCACTTACAAAAACTC +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSRPNSS*CHLQKL
Trigger: GAGTTTTTGTAAGTGGCAGCACGAAGAGTTTGGCCG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTAGCTTGCCACTGAAGTaGATGCTTTGGGTACGAAGT +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFSLPLK*MLWVRS
Trigger: ACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCT...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTGGATAACACGAGACTaGATGCCTTTGCCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFWITRD*MPLPQV
Trigger: TACCTGTGGCAAAGGCATGCAGTCTCGTGTTATCCA...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCAGCACAGGATGGGTaGTCATTGTCATGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFSAQDG*SLSWLM
Trigger: CATCAACCATGACAATGACCACCCATCCTGTGCTGA...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCTCACCAGACATGATATaGAGACCATCAGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSSPDMI*RPSAQD
Trigger: ATCCTGTGCTGATGGTCTTCATATCATGTCTGGTGA...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTTTAATGACTTTGCATaGCTTTCCATTGCCGTTACA +
Preference number: 4 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMFNDFA*LSIAVT
Trigger: TGTAACGGCAATGGAAAGTCATGCAAAGTCATTAAA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCCAAACTCTTCGTGCTaGCACTTACAAAAACTCTCC +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSPNSSC*HLQKLS
Trigger: GGAGAGTTTTTGTAAGTGGCAGCACGAAGAGTTTGG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTTCTGCTGGTGTTTCATaGAGGAGAATGAGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFSAGVS*RRMSFS
Trigger: GCTAAAGCTCATTCTCCTCCATGAAACACCAGCAGA...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGTCTGGAAGAGGGTCTaGTGGAACAGTATATTCATA +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSVWKRV*WNSIFI
Trigger: TATGAATATACTGTTCCATCAGACCCTCTTCCAGAC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCGACAAGGTTGTTCATTaGACTTTCGAATCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSDKVVH*TFESVA
Trigger: AGCCACAGATTCGAAAGTGCAATGAACAACCTTGTC...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR GCA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTCTTCCTGTGATCTTATaGATGCACTGGATAACACGA +
Preference number: 4 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFLPVIL*MHWITR
Trigger: TCGTGTTATCCAGTGCATGCATAAGATCACAGGAAG...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR TCA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCATATATCTAGTCCCTaGTATCCACAAGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFHISSP*YPQEVP
Trigger: TGGAACTTCTTGTGGATATCAGGGACTAGATATATG...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CCA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCTTCTGTATTGTTTTCTaGGGCCATTACAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSFCIVF*GHYNPL
Trigger: CAAGGGATTGTAATGGCCCCAGAAAACAATACAGAA...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp CCCGAACCAGGGCTCAGATTGGCCTCTGGTGGCTTCTTCCTGCGGTaGTCGGGCCACCGAGCGCACCTCCCGCGAGCTGCCCGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PEPGLRLASGGFFLR*SGHRAHLPRAARSL
Trigger: CAGGCTTCGGGCAGCTCGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTGGTTTGGGCCACTaGTCCACTGCGAAGCGCTGCGCCAGGAAGCGGCCATCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: GSAVARVGSGPGLGH*STAKRCARKRPSLR
Trigger: CCGGAGAGATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTGGCCTCTGGTaGCTTCTTCCTGCGGTGCTCGGGCCACCGAGCGCACCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: LAPGETRTRAQIGLW*LLPAVLGPPSAPPA
Trigger: CGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GGAGACCCGAACCAGGGCTCAGATTGGCCTCTGGTGGCTTCTTCCTaGGGTGCTCGGGCCACCGAGCGCACCTCCCGCGAGCTGCCCGAA +
Preference number: 5 (lower is better)
Translates to: GDPNQGSDWPLVASS*GARATERTSRELPE
Trigger: TTCGGGCAGCTCGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp CGTTGCCCGGGTGGGATCGGGACCTGGTTTGGGCCACTGCTCCACTaGGAAGCGCTGCGCCAGGAAGCGGCCATCTCTCCGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RCPGGIGTWFGPLLH*EALRQEAAISPEQQ
Trigger: CTGCTGCTCCGGAGAGATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CACCTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTGGCCTCTaGTGGCTTCTTCCTGCGGTGCTCGGGCCACCGAGCGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: HLAPGETRTRAQIGL*WLLPAVLGPPSAPP
Trigger: GGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GCCCCCGCTGAGGCCCGTGGCGTTCAGCGACTCCCGGCGCCAGAGTaGAGGAAACACGACTTCCCATTCCTCGAGATCCGGGGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: APAEARGVQRLPAPE*RKHDFPFLEIRGEL
Trigger: CAGCTCACCCCGGATCTCGAGGAATGGGAAGTCGTGTTTCCTGCACTCTGGCGCCGGGAGTCGCTGAACGCCACGGGCCTCAGCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp TCCTCAGCACCTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTaGCCTCTGGTGGCTTCTTCCTGCGGTGCTCGGGCCACCGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSAPGSRGDPNQGSD*PLVASSCGARATER
Trigger: GCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTGCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp AAGAGCCAGGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTGGTTTaGGCCACTGCTCCACTGCGAAGCGCTGCGCCAGGAAGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: KSQGQPLPGWDRDLV*ATAPLRSAAPGSGH
Trigger: ATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGCTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CAAGGAAGAGCCAGGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTaGTTTGGGCCACTGCTCCACTGCGAAGCGCTGCGCCAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: QGRARVSRCPGGIGT*FGPLLHCEALRQEA
Trigger: CGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGCTCTTCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GTGGGATCGGGACCTGGTTTGGGCCACTGCTCCACTGCGAAGCGCTaGGCCAGGAAGCGGCCATCTCTCCGGAGCAGCAGGTACAGGTCC +
Preference number: 5 (lower is better)
Translates to: VGSGPGLGHCSTAKR*ARKRPSLRSSRYRS
Trigger: GGACCTGTACCTGCTGCTCCGGAGAGATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp CCCGAGGACAGGGCAGTATCTCCGCTGGATCCCCGAGGCAGCTCCTaGGATTCGAGTTCCTCCTCGTCCTCAGCACCTGGCTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PEDRAVSPLDPRGSS*DSSSSSSSAPGSRG
Trigger: TCCCCTGGAGCCAGGTGCTGAGGACGAGGAGGAACTCGAATCTCAGGAGCTGCCTCGGGGATCCAGCGGAGATACTGCCCTGTCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp GAGCACTCCGACCACACTCCGGCCTCCCACACCGTCATGCAGTCCTaGCCCTCACAGCGTTGCACAGTTGCGGGCTTTGGCCCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: EHSDHTPASHTVMQS*PSQRCTVAGFGPRQ
Trigger: CTGCCTAGGGCCAAAGCCCGCAACTGTGCAACGCTGTGAGGGTCAGGACTGCATGACGGTGTGGGAGGCCGGAGTGTGGTCGGAGTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GGCTCCACTCTCCAGCCAAGTGCTCGGGTGCAGGAGTCCTGCGGGTaGATTCTCCAGCCTTACACCACTTGCCAGGGTCGCAGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: GSTLQPSARVQESCG*ILQPYTTCQGRSQS
Trigger: GGACTGACTGCGACCCTGGCAAGTGGTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp TCCACGGGCTCCACTCTCCAGCCAAGTGCTCGGGTGCAGGAGTCCTaGGGGTGCATTCTCCAGCCTTACACCACTTGCCAGGGTCGCAGT +
Preference number: 5 (lower is better)
Translates to: STGSTLQPSARVQES*GCILQPYTTCQGRS
Trigger: ACTGCGACCCTGGCAAGTGGTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CCGAGGCAGCTCCTGAGATTCGAGTTCCTCCTCGTCCTCAGCACCTaGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTGGCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PRQLLRFEFLLVLST*LQGRPEPGLRLASG
Trigger: ACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTGCTGAGGACGAGGAGGAACTCGAATCTCAGGAGCTGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp ACTTCACTGAGCACTCCGACCACACTCCGGCCTCCCACACCGTCATaGAGTCCTGACCCTCACAGCGTTGCACAGTTGCGGGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TSLSTPTTLRPPTPS*SPDPHSVAQLRALA
Trigger: GGCCAAAGCCCGCAACTGTGCAACGCTGTGAGGGTCAGGACTGCATGACGGTGTGGGAGGCCGGAGTGTGGTCGGAGTGCTCAGTGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp ACTACAGGAACTCCACGGGCTCCACTCTCCAGCCAAGTGCTCGGGTaGAGGAGTCCTGCGGGTGCATTCTCCAGCCTTACACCACTTGCC +
Preference number: 5 (lower is better)
Translates to: TTGTPRAPLSSQVLG*RSPAGAFSSLTPLA
Trigger: GGCAAGTGGTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGAGTTCCTGTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp GCCAGAGTGCAGGAAACACGACTTCCCATTCCTCGAGATCCGGGGTaGGCTGCAACCCTGAGGTGGTCCCATGCGACAGGAAGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: ARVQETRLPIPRDPG*AATLRWSHATGSLA
Trigger: AGCTAGGCTTCCTGTCGCATGGGACCACCTCAGGGTTGCAGCTCACCCCGGATCTCGAGGAATGGGAAGTCGTGTTTCCTGCACTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp CAACTTCGACTACAGGAACTCCACGGGCTCCACTCTCCAGCCAAGTaGTCGGGTGCAGGAGTCCTGCGGGTGCATTCTCCAGCCTTACAC +
Preference number: 5 (lower is better)
Translates to: QLRLQELHGLHSPAK*SGAGVLRVHSPALH
Trigger: GTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGAGTTCCTGTAGTCGAAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp CCCTTGCTTCAGAACCTAGCCCAGGACACTTGCGCTCTCGACTGCTaGCCCCAGAACTGCAACTTCGACTACAGGAACTCCACGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PLLQNLAQDTCALDC*PQNCNFDYRNSTGS
Trigger: GGAGCCCGTGGAGTTCCTGTAGTCGAAGTTGCAGTTCTGGGGTCAGCAGTCGAGAGCGCAAGTGTCCTGGGCTAGGTTCTGAAGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp CAGGGTCGCAGTCAGTCCCATCCATTGGTGGGTCCAGCTTGGTCCTaGACTCTGCTTCCCCCTCCACTTTGCACCACAAACCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: QGRSQSHPLVGPAWS*TLLPPPLCTTNQCR
Trigger: TCTGCACTGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp ACTTGCCAGGGTCGCAGTCAGTCCCATCCATTGGTGGGTCCAGCTTaGTCCTGCACTCTGCTTCCCCCTCCACTTTGCACCACAAACCAG +
Preference number: 5 (lower is better)
Translates to: TCQGRSQSHPLVGPA*SCTLLPPPLCTTNQ
Trigger: CTGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp AGCCTTACACCACTTGCCAGGGTCGCAGTCAGTCCCATCCATTGGTaGGTCCAGCTTGGTCCTGCACTCTGCTTCCCCCTCCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: SLTPLARVAVSPIHW*VQLGPALCFPLHFA
Trigger: TGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGTGGTGTAAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTGGTCTCCCAGGCACTaGAAGGTCAGGGCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPWSPRH*KVRAAS
Trigger: ACTGGCTGCCCTGACCTTCAAGTGCCTGGGAGACCA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCGGGGACGAGGGCCGTaGCGGGGGCAGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSRGRGP*RGQRRL
Trigger: CAGCCTCCTCTGCCCCCGCAACGGCCCTCGTCCCCG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCACCAGCCTTACACCACTaGCCAGGGTCGCAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAPALHH*PGSQSV
Trigger: GACTGACTGCGACCCTGGCAAGTGGTGTAAGGCTGG...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GCAGTCAGTCCCATCCATTGGTGGGTCCAGCTTGGTCCTGCACTCTaGTTCCCCCTCCACTTTGCACCACAAACCAGTGCAGATAACATG +
Preference number: 5 (lower is better)
Translates to: AVSPIHWWVQLGPAL*FPLHFAPQTSADNM
Trigger: CATGTTATCTGCACTGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTTTGTGCAGGACACCATaGTCTTCCTCTCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPLCRTP*SSSLLL
Trigger: GAGGAGGAGAGAGGAAGACAATGGTGTCCTGCACAA...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTCTGGGTACAGGCCACTaGTCTACTCTGGACTCCTTT +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPLGTGH*STLDSF
Trigger: AAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAG...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp AGGCAGTCCCTCTCCCAGGCTCTAATCAGGGTTCCATTTTCCAGCTaGTGGGTACAGGCCACTTGTCTACTCTGGACTCCTTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: RQSLSQALIRVPFSS*WVQATCLLWTPFPQ
Trigger: CTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAGCAGCTGGAAAATGGAACCCTGATTAGAGCCTGGGAGAGGGACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGCCTAGCCCAGGACACTaGCGCTCTCGACTGCTGACC +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMPSPGH*RSRLLT
Trigger: GGTCAGCAGTCGAGAGCGCAAGTGTCCTGGGCTAGG...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCACGAGACTGCATGCCTTaGCCACAGGTAATGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGARDCMP*PQVMEH
Trigger: GTGCTCCATTACCTGTGGCAAAGGCATGCAGTCTCG...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp TCCACCGCAGCAATGTCTTCTCCCCAGCTGGTCGACATCTCCAAATaGACATCATTCCTCCGGCCAAACTCTTCGTGCTGCCACTTACAA +
Preference number: 5 (lower is better)
Translates to: STAAMSSPQLVDISK*TSFLRPNSSCCHLQ
Trigger: TTGTAAGTGGCAGCACGAAGAGTTTGGCCGGAGGAATGATGTGCATTTGGAGATGTCGACCAGCTGGGGAGAAGACATTGCTGCGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GCCATCCCTGGCAATTTTGAGGGAACCAGCACCGAACTGAGACTCTaGGGATCTGTATGCAACAAGCAGCTACTGGCCTTTGACCTGAGA +
Preference number: 5 (lower is better)
Translates to: AIPGNFEGTSTELRL*GSVCNKQLLAFDLR
Trigger: TCTCAGGTCAAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CAGTCCCTCTCCCAGGCTCTAATCAGGGTTCCATTTTCCAGCTGCTaGGTACAGGCCACTTGTCTACTCTGGACTCCTTTTCCACAGGTT +
Preference number: 5 (lower is better)
Translates to: QSLSQALIRVPFSSC*VQATCLLWTPFPQV
Trigger: AACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAGCAGCTGGAAAATGGAACCCTGATTAGAGCCTGGGAGAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp CAGTGTAAGCCATCCCTGGCAATTTTGAGGGAACCAGCACCGAACTaGGACTCTGCGGATCTGTATGCAACAAGCAGCTACTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: QCKPSLAILREPAPN*DSADLYATSSYWPL
Trigger: CAAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGGCTTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp GATCTGGCACTGTTCGTCTGCAGTGTAAGCCATCCCTGGCAATTTTaGGGGAACCAGCACCGAACTGAGACTCTGCGGATCTGTATGCAA +
Preference number: 5 (lower is better)
Translates to: DLALFVCSVSHPWQF*GNQHRTETLRICMQ
Trigger: TTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGGCTTACACTGCAGACGAACAGTGCCAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp AGGGTTCCATTTTCCAGCTGCTGGGTACAGGCCACTTGTCTACTCTaGACTCCTTTTCCACAGGTTCGTGAACACGTGGTCCATTCTGTC +
Preference number: 5 (lower is better)
Translates to: RVPFSSCWVQATCLL*TPFPQVREHVVHSV
Trigger: GACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAGCAGCTGGAAAATGGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTGGATCGGGACCTGGTTaGGGCCACTGCTCCACTGCG +
Preference number: 5 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFGSGPG*GHCSTA
Trigger: CGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCC...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTGGTTTGGTCAAGTCCTaGCATTTCTTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPGLVKS*HFLLST
Trigger: TGTGGACAACAAGAAATGCAAGGACTTGACCAAACC...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTTTAGCACACGGAGGTaGACCTGCACACCCAGACTC +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMFSTRR*TCTPRL
Trigger: GAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATACTTTCCAGATCCTCCTaGCTGCACCTGGACCATGAA +
Preference number: 5 (lower is better)
Translates to: WIRGQPCEELSSQRKSRILSRSS*LHLDHE
Trigger: TTCATGGTCCAGGTGCAGCAAGGAGGATCTGGAAAG...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGCCATCCCTGGCAATTTaGAGGGAACCAGCACCGAAC +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMPSLAI*REPAPN
Trigger: GTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGG...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATAGGCCATTACAATCCCTaGCTTCAGAACCTAGCCCAG +
Preference number: 5 (lower is better)
Translates to: WIRGQPCEELSSQRKSRIGHYNP*LQNLAQ
Trigger: CTGGGCTAGGTTCTGAAGCAAGGGATTGTAATGGCC...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCATCTGGCACCTGCCATTaGCACATATATCTAGTCCCT +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGASGTCH*HIYLVP
Trigger: AGGGACTAGATATATGTGCAAATGGCAGGTGCCAGA...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTGATGCAAAGGTGTGGTaGTGGGACCTTTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCDAKVW*WDLWQR
Trigger: TCTCTGCCAAAGGTCCCACAACCACACCTTTGCATC...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTCATCATCCACCTTGTTaGACAAGGTTGTTCATTGCA +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPHHPPC*TRLFIA
Trigger: TGCAATGAACAACCTTGTCAAACAAGGTGGATGATG...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTCTGTCATCATCCACCTaGTTTGACAAGGTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPLSSST*FDKVVH
Trigger: ATGAACAACCTTGTCAAACAAGGTGGATGATGACAG...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTGCACAGTTGCGGGCTTaGGCCCTAGGCAGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFAQLRA*ALGSPS
Trigger: AGAGGGACTGCCTAGGGCCAAAGCCCGCAACTGTGC...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp GGTACAGGCCACTTGTCTACTCTGGACTCCTTTTCCACAGGTTCGTaGACACGTGGTCCATTCTGTCATCATCCACCTTGTTTGACAAGG +
Preference number: 5 (lower is better)
Translates to: GTGHLSTLDSFSTGS*TRGPFCHHPPCLTR
Trigger: CCTTGTCAAACAAGGTGGATGATGACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CCCTTGCTCTCCAGAGACCTTCTGTCTCCCTGTGGCTCACTCTGCAAGCTTCCTATGGCCATTGTATCATaGAATGGCTCAATGAATAGG +
Preference number: 5 (lower is better)
Translates to: PLLSRDLLSPCGSLCKLPMAIVS*NGSMNR
Trigger: CCTATTCATTGAGCCATTCAATGATACAATGGCCAT...AGGAAGCTTGCAGAGTGAGCCACAGGGAGACAGAAGGTCTCTGGAGAGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAAACATGCTGCATCTCTaGACAAAAAGAAGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGANMLHL*TKRSQR
Trigger: CCTCTGGCTTCTTTTTGTCAAGAGATGCAGCATGTT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAACTACGGTCTCGATGTaGTATTCCTGGGATAATTTG +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGATTVSM*YSWDNL
Trigger: CAAATTATCCCAGGAATACAACATCGAGACCGTAGT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTGCTTCCCCCTCCACTTaGCACCACAAACCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFASPST*HHKPVQ
Trigger: CTGCACTGGTTTGTGGTGCAAAGTGGAGGGGGAAGC...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAAAGTCCTTGCATTTCTaGTTGTCCACAAGGCTGATA +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGAKSLHF*LSTRLI
Trigger: TATCAGCCTTGTGGACAACAAGAAATGCAAGGACTT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp CTTCCGTCACAGCTTCTCTACACCTTCACCAACAGCGCAATGGTGATTCAGTGTATCTGTGGCTCTGGTTaGGTCAAGTCCTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: LPSQLLYTFTNSAMVIQCICGSG*VKSLHF
Trigger: GAAATGCAAGGACTTGACCAAACCAGAGCCACAGAT...ACACTGAATCACCATTGCGCTGTTGGTGAAGGTGTAGAGAAGCTGTGACGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp GAGGGGCCCCGGCTCCTTAGAACTCTGATTGTCTGGAAGAGGGTCTaGTGGAACAGTATATTCATAGTGAAGACCGTAATTCTGATCTTG +
Preference number: 5 (lower is better)
Translates to: EGPRLLRTLIVWKRV*WNSIFIVKTVILIL
Trigger: CAAGATCAGAATTACGGTCTTCACTATGAATATACTGTTCCATCAGACCCTCTTCCAGACAATCAGAGTTCTAAGGAGCCGGGGCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp AATTTTGAGGGAACCAGCACCGAACTGAGACTCTGCGGATCTGTATaGAACAAGCAGCTACTGGCCTTTGACCTGAGAAATCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: NFEGTSTELRLCGSV*NKQLLAFDLRNLSR
Trigger: TCTGGAAAGATTTCTCAGGTCAAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGGATACGTGGACAGCCCTGTGAAGAACTCTCTTCCCAAAGGAAGTCTCGCATATGCACACCCAGACTCTaGTGCTGGAAAAGGTTAAAA +
Preference number: 5 (lower is better)
Translates to: WIRGQPCEELSSQRKSRICTPRL*CWKRLK
Trigger: TTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCA...TATGCGAGACTTCCTTTGGGAAGAGAGTTCTTCACAGGGCTGTCCACGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCACTCACATATTCTGTATaGTTTTCTGGGGCCATTACA +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGALTYSV*FSGAIT
Trigger: TGTAATGGCCCCAGAAAACAATACAGAATATGTGAG...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCCCTGTGGCTCACTCTGCAAGCTTCCTGCAGTGAATACTTCAGAACAGGGGCAACAAGGCTGATATTCTaGCTCATGATTTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLWLTLQASCSEYFRTGATRLIF*LMIFVQ
Trigger: CTGCACAAAAATCATGAGCAAGAATATCAGCCTTGT...TGCCCCTGTTCTGAAGTATTCACTGCAGGAAGCTTGCAGAGTGAGCCACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp CTCGAAGAGCTAAGAAGCTATGTGCCGGCTTTTCCTCCACAACTTTaGTTCTTCTCGCTCCAGCAGGTATCACCAGAACTTCTACATAAC +
Preference number: 5 (lower is better)
Translates to: LEELRSYVPAFPPQL*FFSLQQVSPELLHN
Trigger: GTTATGTAGAAGTTCTGGTGATACCTGCTGGAGCGAGAAGAATCAAAGTTGTGGAGGAAAAGCCGGCACATAGCTTCTTAGCTCTTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp AACCTGCAGGACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTaGGGCCATTACAATCCCTTGCTTCAGAACCTAGCCCAGGACACT +
Preference number: 5 (lower is better)
Translates to: NLQDKVDSHIFCIVF*GHYNPLLQNLAQDT
Trigger: AGTGTCCTGGGCTAGGTTCTGAAGCAAGGGATTGTAATGGCCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CCACTTGTCTACTCTGGACTCCTTTTCCACAGGTTCGTGAACACGTaGTCCATTCTGTCATCATCCACCTTGTTTGACAAGGTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PLVYSGLLFHRFVNT*SILSSSTLFDKVVH
Trigger: ATGAACAACCTTGTCAAACAAGGTGGATGATGACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp GAAAAGCATTCATTTCCGTGTCTTCCTGTGATCTTATGCATGCACTaGATAACACGAGACTGCATGCCTTTGCCACAGGTAATGGAGCAC +
Preference number: 5 (lower is better)
Translates to: EKHSFPCLPVILCMH*ITRDCMPLPQVMEH
Trigger: GTGCTCCATTACCTGTGGCAAAGGCATGCAGTCTCGTGTTATCCAGTGCATGCATAAGATCACAGGAAGACACGGAAATGAATGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp GCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCAGGATGGGTGGTCATaGTCATGGTTGATGCCCATG +
Preference number: 5 (lower is better)
Translates to: AVFKCMFTNRIKVSVLTFQDGWS*SWLMPM
Trigger: CATGGGCATCAACCATGACAATGACCACCCATCCTG...AAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTCGCCTTTAATGACTTaGCATGACTTTCCATTGCCG +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMSPLMT*HDFPLP
Trigger: CGGCAATGGAAAGTCATGCAAAGTCATTAAAGGCGA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp ACTTTTTCCTCTGTGGACCTCTTCTGCCTGTATAAACGGTGCGGGTaGCCTATGATGGCCATTGTATCATTGAATGGCTCAATGAATAGG +
Preference number: 5 (lower is better)
Translates to: TFSSVDLFCLYKRCG*PMMAIVSLNGSMNR
Trigger: CCTATTCATTGAGCCATTCAATGATACAATGGCCATCATAGGTCACCCGCACCGTTTATACAGGCAGAAGAGGTCCACAGAGGAAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp ACCTGCCCCTCTGGTGTGATTAAAATCGCCTTTAATGACTTTGCATaGCTTTCCATTGCCGTTACAAACACCACAATGATCTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: TCPSGVIKIAFNDFA*LSIAVTNTTMIFPG
Trigger: GCCAGGGAAGATCATTGTGGTGTTTGTAACGGCAATGGAAAGTCATGCAAAGTCATTAAAGGCGATTTTAATCACACCAGAGGGGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp GGTGTTTCATGGAGGAGAATGAGCTTTAGCACACGGAGGTTGACCTaGACACCCAGACTCTTGTGCTGGAAAAGGTTAAAAACCATATTT +
Preference number: 5 (lower is better)
Translates to: GVSWRRMSFSTRRLT*TPRLLCWKRLKTIF
Trigger: AAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAAGCTCATTCTCCTCCATGAAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp AACACTATAGGCCTGACATTGCCAGTCTCTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: NTIGLTLPVSESRQT*RTRWILTYSVLFSG
Trigger: CCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCCTATAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp CAAGGCACATGGTTTTTCTTCATCGAAGACAGCTTGCCACTGAAGTaGATGCTTTGGGTACGAAGTTCTAACACTATAGGCCTGACATTG +
Preference number: 5 (lower is better)
Translates to: QGTWFFFIEDSLPLK*MLWVRSSNTIGLTL
Trigger: CAATGTCAGGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAAGAAAAACCATGTGCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp TTCTCCGAAGAAAAGCATTCATTTCCGTGTCTTCCTGTGATCTTATaGATGCACTGGATAACACGAGACTGCATGCCTTTGCCACAGGTA +
Preference number: 5 (lower is better)
Translates to: FSEEKHSFPCLPVIL*MHWITRDCMPLPQV
Trigger: TACCTGTGGCAAAGGCATGCAGTCTCGTGTTATCCAGTGCATGCATAAGATCACAGGAAGACACGGAAATGAATGCTTTTCTTCGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp TTTGATCCATTCACCAGACATGATATGAAGACCATCAGCACAGGATaGGTGGTCATTGTCATGGTTGATGCCCATGTTGTGACCCATTTC +
Preference number: 5 (lower is better)
Translates to: FDPFTRHDMKTISTG*VVIVMVDAHVVTHF
Trigger: GAAATGGGTCACAACATGGGCATCAACCATGACAATGACCACCCATCCTGTGCTGATGGTCTTCATATCATGTCTGGTGAATGGATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp TGGTTTTTCTTCATCGAAGACAGCTTGCCACTGAAGTGCATGCTTTaGGTACGAAGTTCTAACACTATAGGCCTGACATTGCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: WFFFIEDSLPLKCML*VRSSNTIGLTLPVS
Trigger: AGAGACTGGCAATGTCAGGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAAGAAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGAATAGGAAGTCCTCATaGAGCTGTATAAAGCCCATC +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMNRKSS*SCIKPI
Trigger: GATGGGCTTTATACAGCTCAATGAGGACTTCCTATT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCCGTGGTAGGAAACCATaGCAGGGTCTGCAACTACTA +
Preference number: 5 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSRGRKP*QGLQLL
Trigger: TAGTAGTTGCAGACCCTGCAATGGTTTCCTACCACG...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTACTATAGGCCTGACATaGCCAGTCTCTGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFTIGLT*PVSESR
Trigger: CCTGGATTCAGAGACTGGCAATGTCAGGCCTATAGT...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGTCAGGGCAGCCAGTCTaGGTGATGTTATTGTATTTA +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMSGQPV*VMLLYL
Trigger: TAAATACAATAACATCACCAAGACTGGCTGCCCTGA...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp TTAATGACTTTGCATGACTTTCCATTGCCGTTACAAACACCACAATaGTCTTCCCTGGCAAGAGACCCCAGTAAACCATCACAACCAGCT +
Preference number: 5 (lower is better)
Translates to: LMTLHDFPLPLQTPQ*SSLARDPSKPSQPA
Trigger: AGCTGGTTGTGATGGTTTACTGGGGTCTCTTGCCAGGGAAGATCATTGTGGTGTTTGTAACGGCAATGGAAAGTCATGCAAAGTCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp TGGTCCATTCTGTCATCATCCACCTTGTTTGACAAGGTTGTTCATTaGACTTTCGAATCTGTGGCTCTGGTTTGGTCAAGTCCTTGCATT +
Preference number: 5 (lower is better)
Translates to: WSILSSSTLFDKVVH*TFESVALVWSSPCI
Trigger: AATGCAAGGACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACAACCTTGTCAAACAAGGTGGATGATGACAGAATGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp ATTAATTTTCTCATTACAGGGCTGAAGGTGACATGGCCTGTAGGCTaGAGGTTTCTCCGAAGAAAAGCATTCATTTCCGTGTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: INFLITGLKVTWPVG*RFLRRKAFISVSSC
Trigger: ACAGGAAGACACGGAAATGAATGCTTTTCTTCGGAGAAACCTGCAGCCTACAGGCCATGTCACCTTCAGCCCTGTAATGAGAAAATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 90 bp CCTTGTTTGACAAGGTTGTTCATTGCACTTTCGAATCTGTGGCTCTaGTTTGGTCAAGTCCTTGCATTTCTTGTTGTCCACAAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: PCLTRLFIALSNLWL*FGQVLAFLVVHKAD
Trigger: ATCAGCCTTGTGGACAACAAGAAATGCAAGGACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACAACCTTGTCAAACAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTGCAAGGTTCAGGCCGTaGTCTTCAGCAATAATACAC +
Preference number: 5 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFARFRP*SSAIIH
Trigger: GTGTATTATTGCTGAAGACAACGGCCTGAACCTTGC...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TCAGTGTACATCGATACAGTGCATCAGGCTCACAGTGCTGTGTTCAAGTGCATGAACATCACCAAGATTTaGTCCTTTGATCCATTCACC +
Preference number: 5 (lower is better)
Translates to: SVYIDTVHQAHSAVFKCMNITKI*SFDPFT
Trigger: GGTGAATGGATCAAAGGACAAAATCTTGGTGATGTT...CATGCACTTGAACACAGCACTGTGAGCCTGATGCACTGTATCGATGTACACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCTTCATCGAAGACAGCTaGCCACTGAAGTGCATGCTT +
Preference number: 5 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSFIEDS*PLKCML
Trigger: AAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAA...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTTCCTTTTCCTCCACAACTTaGATTCTTCTCGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CVQVHVHQQDQSLCLDFSFSSTT*ILLAPA
Trigger: TGCTGGAGCGAGAAGAATCAAAGTTGTGGAGGAAAA...GGAAAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 90 bp CAACCAGCTTTCTGGCACCTGCCATTTGCACATATATCTAGTCCCTaGTATCCACAAGAAGTTCCATCCATCACTTTTTCTGATAGAAGA +
Preference number: 5 (lower is better)
Translates to: QPAFWHLPFAHISSP*YPQEVPSITFSDRR
Trigger: TCTTCTATCAGAAAAAGTGATGGATGGAACTTCTTGTGGATATCAGGGACTAGATATATGTGCAAATGGCAGGTGCCAGAAAGCTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 90 bp ATGAGCTTTAGCACACGGAGGTTGACCTGCACACCCAGACTCTTGTaGTGGAAAAGGTTAAAAACCATATTTAGGATTGTCAGAATGAAT +
Preference number: 5 (lower is better)
Translates to: MSFSTRRLTCTPRLL*WKRLKTIFRIVRMN
Trigger: ATTCATTCTGACAATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAAGCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS-3UTR CAA 90 bp TGCTGTGTTCAAGTGCATGTTCACCAACAGGATCAAAGTCTCTGTCTTGACTTTCCAAGATTTTGTCCTTaGATCCATTCACCAGACATG +
Preference number: 5 (lower is better)
Translates to: CCVQVHVHQQDQSLCLDFPRFCP*IHSPDM
Trigger: CATGTCTGGTGAATGGATCAAAGGACAAAATCTTGG...AAAGTCAAGACAGAGACTTTGATCCTGTTGGTGAACATGCACTTGAACACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp AGCTGCGCCCGGATCCCGGGTCTGAGCTGCCCCCGCTaGGGCCCGTGGCGTTCAGCGACTCCCGGCGCCAGA +
Preference number: 6 (lower is better)
Translates to: SCARIPGLSCPR*GPWRSATPGAR
Trigger: TCTGGCGCCGGGAGTCGCTGAACGCCACGGGCCTCAGCGGGGGCAGCTCAGACCCGGGATCCGGGCGCAGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp AGAGGGCCGGGATCCGCAACAGCACCTCCTCCGCGCTaGGTTCCTCTTGCTGGGCAGGGGGCGGGGACGAGG +
Preference number: 6 (lower is better)
Translates to: RGPGSATAPPPR*VPLAGQGAGTR
Trigger: CCTCGTCCCCGCCCCCTGCCCAGCAAGAGGAACCCAGCGCGGAGGAGGTGCTGTTGCGGATCCCGGCCCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGGCTCAGATTGGCCTCTGGTGGCTTCTTCCTGCGGTaGTCGGGCCACCGAGCGCACCTCCCGCGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GLRLASGGFFLR*SGHRAHLPRAA
Trigger: GGCAGCTCGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GCCAGGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTaGTTTGGGCCACTGCTCCACTGCGAAGCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: ARVSRCPGGIGT*FGPLLHCEALR
Trigger: GCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp GGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTGGTTaGGGCCACTGCTCCACTGCGAAGCGCTGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: GSAVARVGSGPG*GHCSTAKRCAR
Trigger: CCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp GAAGAGCCAGGGTCAGCCGTTGCCCGGGTGGGATCGGGACCTGGTTaGGGCCACTGCTCCACTGCGAAGCGCTGCGCCAGGAAGCGGCCA +
Preference number: 6 (lower is better)
Translates to: EEPGSAVARVGSGPG*GHCSTAKRCARKRP
Trigger: TGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGCTCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GTTGCCCGGGTGGGATCGGGACCTGGTTTGGGCCACTaGTCCACTGCGAAGCGCTGCGCCAGGAAGCGGCCA +
Preference number: 6 (lower is better)
Translates to: VARVGSGPGLGH*STAKRCARKRP
Trigger: TGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GGTCAGCCGTTGCCCGGGTGGGATCGGGACCTGGTTTaGGCCACTGCTCCACTGCGAAGCGCTGCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: GQPLPGWDRDLV*ATAPLRSAAPG
Trigger: TCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp GTCCTCAGCACCTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATaGGCCTCTGGTGGCTTCTTCCTGCGGTGCTCGGGCCACCGAGCG +
Preference number: 6 (lower is better)
Translates to: VLSTWLQGRPEPGLR*ASGGFFLRCSGHRA
Trigger: CGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTGCTGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp AACCAGGGCTCAGATTGGCCTCTGGTGGCTTCTTCCTaGGGTGCTCGGGCCACCGAGCGCACCTCCCGCGAG +
Preference number: 6 (lower is better)
Translates to: NQGSDWPLVASS*GARATERTSRE
Trigger: CTCGCGGGAGGTGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGACCTGGTTTGGGCCACTGCTCCACTGCGAAGCGCTaGGCCAGGAAGCGGCCATCTCTCCGGAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPGLGHCSTAKR*ARKRPSLRSSR
Trigger: CCTGCTGCTCCGGAGAGATGGCCGCTTCCTGGCGCAGCGCTTCGCAGTGGAGCAGTGGCCCAAACCAGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GGGGAGACCCGAACCAGGGCTCAGATTGGCCTCTGGTaGCTTCTTCCTGCGGTGCTCGGGCCACCGAGCGCA +
Preference number: 6 (lower is better)
Translates to: GETRTRAQIGLW*LLPAVLGPPSA
Trigger: TGCGCTCGGTGGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp CCTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTaGCCTCTGGTGGCTTCTTCCTGCGGTGCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: PGSRGDPNQGSD*PLVASSCGARA
Trigger: GGCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGCATCTGGCAGCAAGGAAGAGCCAGGGTCAGCCGTTaGCCGGGTGGGATCGGGACCTGGTTTGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: GIWQQGRARVSR*PGGIGTWFGPL
Trigger: CAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGCTCTTCCTTGCTGCCAGATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GCAGCAAGGAAGAGCCAGGGTCAGCCGTTGCCCGGGTaGGATCGGGACCTGGTTTGGGCCACTGCTCCACTG +
Preference number: 6 (lower is better)
Translates to: AARKSQGQPLPG*DRDLVWATAPL
Trigger: CAGTGGAGCAGTGGCCCAAACCAGGTCCCGATCCCACCCGGGCAACGGCTGACCCTGGCTCTTCCTTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp ACCTGGCTCCAGGGGAGACCCGAACCAGGGCTCAGATaGGCCTCTGGTGGCTTCTTCCTGCGGTGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: TWLQGRPEPGLR*ASGGFFLRCSG
Trigger: GCCCGAGCACCGCAGGAAGAAGCCACCAGAGGCCAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GAGGCCCGTGGCGTTCAGCGACTCCCGGCGCCAGAGTaGAGGAAACACGACTTCCCATTCCTCGAGATCCGG +
Preference number: 6 (lower is better)
Translates to: EARGVQRLPAPE*RKHDFPFLEIR
Trigger: CCGGATCTCGAGGAATGGGAAGTCGTGTTTCCTGCACTCTGGCGCCGGGAGTCGCTGAACGCCACGGGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp CTCCAGCCAAGTGCTCGGGTGCAGGAGTCCTGCGGGTaGATTCTCCAGCCTTACACCACTTGCCAGGGTCGC +
Preference number: 6 (lower is better)
Translates to: LQPSARVQESCG*ILQPYTTCQGR
Trigger: GCGACCCTGGCAAGTGGTGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp AGCACTCCGACCACACTCCGGCCTCCCACACCGTCATaGAGTCCTGACCCTCACAGCGTTGCACAGTTGCGG +
Preference number: 6 (lower is better)
Translates to: STPTTLRPPTPS*SPDPHSVAQLR
Trigger: CCGCAACTGTGCAACGCTGTGAGGGTCAGGACTGCATGACGGTGTGGGAGGCCGGAGTGTGGTCGGAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp CCGTCATGCAGTCCTGACCCTCACAGCGTTGCACAGTaGCGGGCTTTGGCCCTAGGCAGTCCCTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PSCSPDPHSVAQ*RALALGSPSPR
Trigger: CCTGGGAGAGGGACTGCCTAGGGCCAAAGCCCGCAACTGTGCAACGCTGTGAGGGTCAGGACTGCATGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp AGGGCAGTATCTCCGCTGGATCCCCGAGGCAGCTCCTaGGATTCGAGTTCCTCCTCGTCCTCAGCACCTGGC +
Preference number: 6 (lower is better)
Translates to: RAVSPLDPRGSS*DSSSSSSSAPG
Trigger: GCCAGGTGCTGAGGACGAGGAGGAACTCGAATCTCAGGAGCTGCCTCGGGGATCCAGCGGAGATACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp ACTCCACGGGCTCCACTCTCCAGCCAAGTGCTCGGGTaGAGGAGTCCTGCGGGTGCATTCTCCAGCCTTACA +
Preference number: 6 (lower is better)
Translates to: TPRAPLSSQVLG*RSPAGAFSSLT
Trigger: TGTAAGGCTGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp CTACAGGAACTCCACGGGCTCCACTCTCCAGCCAAGTaGTCGGGTGCAGGAGTCCTGCGGGTGCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: LQELHGLHSPAK*SGAGVLRVHSP
Trigger: TGGAGAATGCACCCGCAGGACTCCTGCACCCGAGCACTTGGCTGGAGAGTGGAGCCCGTGGAGTTCCTGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp CTCCTGAGATTCGAGTTCCTCCTCGTCCTCAGCACCTaGCTCCAGGGGAGACCCGAACCAGGGCTCAGATTG +
Preference number: 6 (lower is better)
Translates to: LLRFEFLLVLST*LQGRPEPGLRL
Trigger: CAATCTGAGCCCTGGTTCGGGTCTCCCCTGGAGCCAGGTGCTGAGGACGAGGAGGAACTCGAATCTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp CTCCAGCCTTACACCACTTGCCAGGGTCGCAGTCAGTCCCATCCATaGGTGGGTCCAGCTTGGTCCTGCACTCTGCTTCCCCCTCCACTT +
Preference number: 6 (lower is better)
Translates to: LQPYTTCQGRSQSHP*VGPAWSCTLLPPPL
Trigger: AAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGTGGTGTAAGGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CAGGAAACACGACTTCCCATTCCTCGAGATCCGGGGTaGGCTGCAACCCTGAGGTGGTCCCATGCGACAGGA +
Preference number: 6 (lower is better)
Translates to: QETRLPIPRDPG*AATLRWSHATG
Trigger: TCCTGTCGCATGGGACCACCTCAGGGTTGCAGCTCACCCCGGATCTCGAGGAATGGGAAGTCGTGTTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp TACACCACTTGCCAGGGTCGCAGTCAGTCCCATCCATaGGTGGGTCCAGCTTGGTCCTGCACTCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: YTTCQGRSQSHP*VGPAWSCTLLP
Trigger: GGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGTGGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp CACTTGCCAGGGTCGCAGTCAGTCCCATCCATTGGTGGGTCCAGCTaGGTCCTGCACTCTGCTTCCCCCTCCACTTTGCACCACAAACCA +
Preference number: 6 (lower is better)
Translates to: HLPGSQSVPSIGGSS*VLHSASPSTLHHKP
Trigger: TGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACTGCGACCCTGGCAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp CCCATCCATTGGTGGGTCCAGCTTGGTCCTGCACTCTaGTTCCCCCTCCACTTTGCACCACAAACCAGTGCA +
Preference number: 6 (lower is better)
Translates to: PIHWWVQLGPAL*FPLHFAPQTSA
Trigger: TGCACTGGTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CAGAACCTAGCCCAGGACACTTGCGCTCTCGACTGCTaGCCCCAGAACTGCAACTTCGACTACAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: QNLAQDTCALDC*PQNCNFDYRNS
Trigger: GGAGTTCCTGTAGTCGAAGTTGCAGTTCTGGGGTCAGCAGTCGAGAGCGCAAGTGTCCTGGGCTAGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp AGTCAGTCCCATCCATTGGTGGGTCCAGCTTGGTCCTaGACTCTGCTTCCCCCTCCACTTTGCACCACAAAC +
Preference number: 6 (lower is better)
Translates to: SQSHPLVGPAWS*TLLPPPLCTTN
Trigger: GTTTGTGGTGCAAAGTGGAGGGGGAAGCAGAGTGCAGGACCAAGCTGGACCCACCAATGGATGGGACTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp ACCATTGTCTTCCTCTCTCCTCCTCCACACGTGGCATaGCAATCGCCCCAGCCTGCGTGTGTCCACATGAAG +
Preference number: 6 (lower is better)
Translates to: TIVFLSPPPHVA*QSPQPACVHMK
Trigger: CTTCATGTGGACACACGCAGGCTGGGGCGATTGCAATGCCACGTGTGGAGGAGGAGAGAGGAAGACAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CTGTTCGTCTGCAGTGTAAGCCATCCCTGGCAATTTTaGGGGAACCAGCACCGAACTGAGACTCTGCGGATC +
Preference number: 6 (lower is better)
Translates to: LFVCSVSHPWQF*GNQHRTETLRI
Trigger: GATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGGCTTACACTGCAGACGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GCAATGTCTTCTCCCCAGCTGGTCGACATCTCCAAATaGACATCATTCCTCCGGCCAAACTCTTCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: AMSSPQLVDISK*TSFLRPNSSCC
Trigger: GCAGCACGAAGAGTTTGGCCGGAGGAATGATGTGCATTTGGAGATGTCGACCAGCTGGGGAGAAGACATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CCATCCCTGGCAATTTTGAGGGAACCAGCACCGAACTaGGACTCTGCGGATCTGTATGCAACAAGCAGCTAC +
Preference number: 6 (lower is better)
Translates to: PSLAILREPAPN*DSADLYATSSY
Trigger: GTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCCAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TTTTCCAGCTGCTGGGTACAGGCCACTTGTCTACTCTaGACTCCTTTTCCACAGGTTCGTGAACACGTGGTC +
Preference number: 6 (lower is better)
Translates to: FSSCWVQATCLL*TPFPQVREHVV
Trigger: GACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAGCAGCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp ATCTCCTGGCTGCATCTGCTCCGTGGTAGGAAACCATaGCAGGGTCTGCAACTACTACGGTCTCGATGTTGT +
Preference number: 6 (lower is better)
Translates to: ISWLHLLRGRKP*QGLQLLRSRCC
Trigger: ACAACATCGAGACCGTAGTAGTTGCAGACCCTGCAATGGTTTCCTACCACGGAGCAGATGCAGCCAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp TGCATCTGCTCCGTGGTAGGAAACCATTGCAGGGTCTaGAACTACTACGGTCTCGATGTTGTATTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CICSVVGNHCRV*NYYGLDVVFLG
Trigger: TCCCAGGAATACAACATCGAGACCGTAGTAGTTGCAGACCCTGCAATGGTTTCCTACCACGGAGCAGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGAACCAGCACCGAACTGAGACTCTGCGGATCTGTATaGAACAAGCAGCTACTGGCCTTTGACCTGAGAAAT +
Preference number: 6 (lower is better)
Translates to: GTSTELRLCGSV*NKQLLAFDLRN
Trigger: ATTTCTCAGGTCAAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGCAATTTTGAGGGAACCAGCACCGAACTGAGACTCTaGGGATCTGTATGCAACAAGCAGCTACTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: GNFEGTSTELRL*GSVCNKQLLAF
Trigger: AAAGGCCAGTAGCTGCTTGTTGCATACAGATCCGCAGAGTCTCAGTTCGGTGCTGGTTCCCTCAAAATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp CCGTGGTGCCCAATATACAGATCTGCTGGTGTTTCATaGAGGAGAATGAGCTTTAGCACACGGAGGTTGACC +
Preference number: 6 (lower is better)
Translates to: PWCPIYRSAGVS*RRMSFSTRRLT
Trigger: GGTCAACCTCCGTGTGCTAAAGCTCATTCTCCTCCATGAAACACCAGCAGATCTGTATATTGGGCACCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TCCCAGGCTCTAATCAGGGTTCCATTTTCCAGCTGCTaGGTACAGGCCACTTGTCTACTCTGGACTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SQALIRVPFSSC*VQATCLLWTPF
Trigger: AAAAGGAGTCCAGAGTAGACAAGTGGCCTGTACCCAGCAGCTGGAAAATGGAACCCTGATTAGAGCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp GACCATCAGCACAGGATGGGTGGTCATTGTCATGGTTaGTGCCCATGTTGTGACCCATTTCATGAGCGATTG +
Preference number: 6 (lower is better)
Translates to: DHQHRMGGHCHG*CPCCDPFHERL
Trigger: CAATCGCTCATGAAATGGGTCACAACATGGGCATCAACCATGACAATGACCACCCATCCTGTGCTGATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp CTCATTACAGGGCTGAAGGTGACATGGCCTGTAGGCTaGAGGTTTCTCCGAAGAAAAGCATTCATTTCCGTG +
Preference number: 6 (lower is better)
Translates to: LITGLKVTWPVG*RFLRRKAFISV
Trigger: CACGGAAATGAATGCTTTTCTTCGGAGAAACCTGCAGCCTACAGGCCATGTCACCTTCAGCCCTGTAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp TCTGCTGGTGTTTCATGGAGGAGAATGAGCTTTAGCACACGGAGGTaGACCTGCACACCCAGACTCTTGTGCTGGAAAAGGTTAAAAACC +
Preference number: 6 (lower is better)
Translates to: SAGVSWRRMSFSTRR*TCTPRLLCWKRLKT
Trigger: GGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAAGCTCATTCTCCTCCATGAAACACCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp TCTGTGGACCTCTTCTGCCTGTATAAACGGTGCGGGTaGCCTATGATGGCCATTGTATCATTGAATGGCTCA +
Preference number: 6 (lower is better)
Translates to: SVDLFCLYKRCG*PMMAIVSLNGS
Trigger: TGAGCCATTCAATGATACAATGGCCATCATAGGTCACCCGCACCGTTTATACAGGCAGAAGAGGTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CACTTGTCTACTCTGGACTCCTTTTCCACAGGTTCGTaGACACGTGGTCCATTCTGTCATCATCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: HLSTLDSFSTGS*TRGPFCHHPPC
Trigger: ACAAGGTGGATGATGACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTAGACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp TGGAGGAGAATGAGCTTTAGCACACGGAGGTTGACCTaGACACCCAGACTCTTGTGCTGGAAAAGGTTAAAA +
Preference number: 6 (lower is better)
Translates to: WRRMSFSTRRLT*TPRLLCWKRLK
Trigger: TTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAAGCTCATTCTCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GGCCTGACATTGCCAGTCTCTGAATCCAGGCAAACCTaGAGGACAAGGTGGATTCTCACATATTCTGTATTG +
Preference number: 6 (lower is better)
Translates to: GLTLPVSESRQT*RTRWILTYSVL
Trigger: CAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp CTTTGGGTACGAAGTTCTAACACTATAGGCCTGACATaGCCAGTCTCTGAATCCAGGCAAACCTGCAGGACA +
Preference number: 6 (lower is better)
Translates to: LWVRSSNTIGLT*PVSESRQTCRT
Trigger: TGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCCTATAGTGTTAGAACTTCGTACCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp AAGTGCATGCTTTGGGTACGAAGTTCTAACACTATAGGCCTGACATaGCCAGTCTCTGAATCCAGGCAAACCTGCAGGACAAGGTGGATT +
Preference number: 6 (lower is better)
Translates to: KCMLWVRSSNTIGLT*PVSESRQTCRTRWI
Trigger: AATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGACTGGCAATGTCAGGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp AAGCAGCTACTGGCCTTTGACCTGAGAAATCTTTCCAGATCCTCCTaGCTGCACCTGGACCATGAAACATCACCAAGATTTTGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: KQLLAFDLRNLSRSS*LHLDHETSPRFCPL
Trigger: CAAAGGACAAAATCTTGGTGATGTTTCATGGTCCAGGTGCAGCAAGGAGGATCTGGAAAGATTTCTCAGGTCAAAGGCCAGTAGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp CTAAGAAGCTATGTGCCGGCTTTTCCTCCACAACTTTaGTTCTTCTCGCTCCAGCAGGTATCACCAGAACTT +
Preference number: 6 (lower is better)
Translates to: LRSYVPAFPPQL*FFSLQQVSPEL
Trigger: AAGTTCTGGTGATACCTGCTGGAGCGAGAAGAATCAAAGTTGTGGAGGAAAAGCCGGCACATAGCTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp ACCCCAGTAAACCATCACAACCAGCTTTCTGGCACCTaGCATTTGCACATATATCTAGTCCCTGATATCCAC +
Preference number: 6 (lower is better)
Translates to: TPVNHHNQLSGT*HLHIYLVPDIH
Trigger: GTGGATATCAGGGACTAGATATATGTGCAAATGGCAGGTGCCAGAAAGCTGGTTGTGATGGTTTACTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TTCACCAGACATGATATGAAGACCATCAGCACAGGATaGGTGGTCATTGTCATGGTTGATGCCCATGTTGTG +
Preference number: 6 (lower is better)
Translates to: FTRHDMKTISTG*VVIVMVDAHVV
Trigger: CACAACATGGGCATCAACCATGACAATGACCACCCATCCTGTGCTGATGGTCTTCATATCATGTCTGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TTCCATTGCCGTTACAAACACCACAATGATCTTCCCTaGCAAGAGACCCCAGTAAACCATCACAACCAGCTT +
Preference number: 6 (lower is better)
Translates to: FHCRYKHHNDLP*QETPVNHHNQL
Trigger: AAGCTGGTTGTGATGGTTTACTGGGGTCTCTTGCCAGGGAAGATCATTGTGGTGTTTGTAACGGCAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TACTCTGGACTCCTTTTCCACAGGTTCGTGAACACGTaGTCCATTCTGTCATCATCCACCTTGTTTGACAAG +
Preference number: 6 (lower is better)
Translates to: YSGLLFHRFVNT*SILSSSTLFDK
Trigger: CTTGTCAAACAAGGTGGATGATGACAGAATGGACCACGTGTTCACGAACCTGTGGAAAAGGAGTCCAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp TCATTTCCGTGTCTTCCTGTGATCTTATGCATGCACTaGATAACACGAGACTGCATGCCTTTGCCACAGGTA +
Preference number: 6 (lower is better)
Translates to: SFPCLPVILCMH*ITRDCMPLPQV
Trigger: TACCTGTGGCAAAGGCATGCAGTCTCGTGTTATCCAGTGCATGCATAAGATCACAGGAAGACACGGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp CTGGCCTTTGACCTGAGAAATCTTTCCAGATCCTCCTaGCTGCACCTGGACCATGAAACATCACCAAGATTT +
Preference number: 6 (lower is better)
Translates to: LAFDLRNLSRSS*LHLDHETSPRF
Trigger: AAATCTTGGTGATGTTTCATGGTCCAGGTGCAGCAAGGAGGATCTGGAAAGATTTCTCAGGTCAAAGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp TTGCATGACTTTCCATTGCCGTTACAAACACCACAATaGTCTTCCCTGGCAAGAGACCCCAGTAAACCATCA +
Preference number: 6 (lower is better)
Translates to: LHDFPLPLQTPQ*SSLARDPSKPS
Trigger: TGATGGTTTACTGGGGTCTCTTGCCAGGGAAGATCATTGTGGTGTTTGTAACGGCAATGGAAAGTCATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp AGCACACGGAGGTTGACCTGCACACCCAGACTCTTGTaGTGGAAAAGGTTAAAAACCATATTTAGGATTGTC +
Preference number: 6 (lower is better)
Translates to: STRRLTCTPRLL*WKRLKTIFRIV
Trigger: GACAATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GTTGTTCATTGCACTTTCGAATCTGTGGCTCTGGTTTaGTCAAGTCCTTGCATTTCTTGTTGTCCACAAGGC +
Preference number: 6 (lower is better)
Translates to: VVHCTFESVALV*SSPCISCCPQG
Trigger: GCCTTGTGGACAACAAGAAATGCAAGGACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp GTATCATTGAATGGCTCAATGAATAGGAAGTCCTCATaGAGCTGTATAAAGCCCATCAGGCCACCTCCACAG +
Preference number: 6 (lower is better)
Translates to: VSLNGSMNRKSS*SCIKPIRPPPQ
Trigger: CTGTGGAGGTGGCCTGATGGGCTTTATACAGCTCAATGAGGACTTCCTATTCATTGAGCCATTCAATGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp GCACATGGTTTTTCTTCATCGAAGACAGCTTGCCACTaGAGTGCATGCTTTGGGTACGAAGTTCTAACACTA +
Preference number: 6 (lower is better)
Translates to: AHGFSSSKTACH*SACFGYEVLTL
Trigger: TAGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAAGAAAAACCATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp TGGTTTTTCTTCATCGAAGACAGCTTGCCACTGAAGTaGATGCTTTGGGTACGAAGTTCTAACACTATAGGC +
Preference number: 6 (lower is better)
Translates to: WFFFIEDSLPLK*MLWVRSSNTIG
Trigger: GCCTATAGTGTTAGAACTTCGTACCCAAAGCATGCACTTCAGTGGCAAGCTGTCTTCGATGAAGAAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp CTGTCATCATCCACCTTGTTTGACAAGGTTGTTCATTaGACTTTCGAATCTGTGGCTCTGGTTTGGTCAAGT +
Preference number: 6 (lower is better)
Translates to: LSSSTLFDKVVH*TFESVALVWSS
Trigger: ACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACAACCTTGTCAAACAAGGTGGATGATGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS GCA 72 bp GAAAAGCATTCATTTCCGTGTCTTCCTGTGATCTTATaGATGCACTGGATAACACGAGACTGCATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: EKHSFPCLPVIL*MHWITRDCMPL
Trigger: CAAAGGCATGCAGTCTCGTGTTATCCAGTGCATGCATAAGATCACAGGAAGACACGGAAATGAATGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp ACACGGAGGTTGACCTGCACACCCAGACTCTTGTGCTaGAAAAGGTTAAAAACCATATTTAGGATTGTCAGA +
Preference number: 6 (lower is better)
Translates to: TRRLTCTPRLLC*KRLKTIFRIVR
Trigger: TCTGACAATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CCA 72 bp GACAAGGTGGATTCTCACATATTCTGTATTGTTTTCTaGGGCCATTACAATCCCTTGCTTCAGAACCTAGCC +
Preference number: 6 (lower is better)
Translates to: DKVDSHIFCIVF*GHYNPLLQNLA
Trigger: GGCTAGGTTCTGAAGCAAGGGATTGTAATGGCCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp ACCTGCAGGACAAGGTGGATTCTCACATATTCTGTATaGTTTTCTGGGGCCATTACAATCCCTTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: TCRTRWILTYSV*FSGAITIPCFR
Trigger: TCTGAAGCAAGGGATTGTAATGGCCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp GGTCCATTCTGTCATCATCCACCTTGTTTGACAAGGTaGTTCATTGCACTTTCGAATCTGTGGCTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: GPFCHHPPCLTR*FIALSNLWLWF
Trigger: AAACCAGAGCCACAGATTCGAAAGTGCAATGAACAACCTTGTCAAACAAGGTGGATGATGACAGAATGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp AGAATGAGCTTTAGCACACGGAGGTTGACCTGCACACCCAGACTCTaGTGCTGGAAAAGGTTAAAAACCATATTTAGGATTGTCAGAATG +
Preference number: 6 (lower is better)
Translates to: RMSFSTRRLTCTPRL*CWKRLKTIFRIVRM
Trigger: CATTCTGACAATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAAGCTCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 72 bp TTTAGCACACGGAGGTTGACCTGCACACCCAGACTCTaGTGCTGGAAAAGGTTAAAAACCATATTTAGGATT +
Preference number: 6 (lower is better)
Translates to: FSTRRLTCTPRL*CWKRLKTIFRI
Trigger: AATCCTAAATATGGTTTTTAACCTTTTCCAGCACAAGAGTCTGGGTGTGCAGGTCAACCTCCGTGTGCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS CAA 90 bp TGTTCATTGCACTTTCGAATCTGTGGCTCTGGTTTGGTCAAGTCCTaGCATTTCTTGTTGTCCACAAGGCTGATATTCTTGCTCATGATT +
Preference number: 6 (lower is better)
Translates to: CSLHFRICGSGLVKS*HFLLSTRLIFLLMI
Trigger: AATCATGAGCAAGAATATCAGCCTTGTGGACAACAAGAAATGCAAGGACTTGACCAAACCAGAGCCACAGATTCGAAAGTGCAATGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7
CDS TCA 72 bp TTCTGGCACCTGCCATTTGCACATATATCTAGTCCCTaGTATCCACAAGAAGTTCCATCCATCACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: FWHLPFAHISSP*YPQEVPSITFS
Trigger: AGAAAAAGTGATGGATGGAACTTCTTGTGGATATCAGGGACTAGATATATGTGCAAATGGCAGGTGCCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052907.7