RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053399

Ensembl transcript IDs: ENSMUST00000093113.5, ENSMUST00000212437.2, ENSMUST00000212665.2

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACACACCGTATCTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTaGTGCATGCGCTCCACTCCCCTGGCAACCAATAGGCTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: AHTVSCGSAGRRHRT*CMRSTPLATNRLGR
Trigger: CCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp CCGTATCTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTGCATaGGCTCCACTCCCCTGGCAACCAATAGGCTGGGCAGGAGAAAGC +
Preference number: 1 (lower is better)
Translates to: PYLAALLAAGTGLAA*APLPWQPIGWAGES
Trigger: GCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp CACACCGTATCTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTaGATGCGCTCCACTCCCCTGGCAACCAATAGGCTGGGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: HTVSCGSAGRRHRTC*MRSTPLATNRLGRR
Trigger: TCTCCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp GAGACCAGGGGCTGGGGCTCCACTCTGGAGGGCAGGCATGGCTGTTaGAGACTTGAACCTGAGTGGGCGTGCTCACTGGACAGAGGGAGT +
Preference number: 1 (lower is better)
Translates to: ETRGWGSTLEGRHGC*RLEPEWACSLDRGS
Trigger: ACTCCCTCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCTGCAACAGCCATGCCTGCCCTCCAGAGTGGAGCCCCAGCCCCTGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp TTCTGGAAGGGCTTCTTCTGCACACACCGTATCTTGCGGCTCTGCTaGCCGCCGGCACAGGACTTGCTGCATGCGCTCCACTCCCCTGGC +
Preference number: 1 (lower is better)
Translates to: FWKGFFCTHRILRLC*PPAQDLLHALHSPG
Trigger: GCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TCTTTCTGGAAGGGCTTCTTCTGCACACACCGTATCTTGCGGCTCTaGTGGCCGCCGGCACAGGACTTGCTGCATGCGCTCCACTCCCCT +
Preference number: 1 (lower is better)
Translates to: SFWKGFFCTHRILRL*WPPAQDLLHALHSP
Trigger: AGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp TTGCCGACACCATCAAGCCACAAGCGGTCCCCTCTGCTGCAGGCATaGACTTGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTG +
Preference number: 1 (lower is better)
Translates to: LPTPSSHKRSPLLQA*TWFHICGPRGGTRV
Trigger: CACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGATGGTGTCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR GCA 90 bp TGCAGTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTaGACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGC +
Preference number: 1 (lower is better)
Translates to: CSGQSESGLLPRRLL*TVAMVMNTSSPPPC
Trigger: GCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp GCTTCTGATGGAGCAGACAACTTGAGGAAGGCCGGCCTTGCTGCATaGAGTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTG +
Preference number: 1 (lower is better)
Translates to: ASDGADNLRKAGLAA*SGQSESGLLPRRLL
Trigger: CAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCCATCAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GAGAACATTCTGACCACTTCGACCAGGCAGACCACTGGCCATGGATaGGCCGGGGCCCTAGTTCTCCGAGCTTTACACACTGGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: ENILTTSTRQTTGHG*AGALVLRALHTGLA
Trigger: GGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAGAATGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GTGCGAGAACATTCTGACCACTTCGACCAGGCAGACCACTGGCCATaGATGGGCCGGGGCCCTAGTTCTCCGAGCTTTACACACTGGCCT +
Preference number: 1 (lower is better)
Translates to: VREHSDHFDQADHWP*MGRGPSSPSFTHWP
Trigger: AGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAGAATGTTCTCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp CCGCAAGTGCGAGAACATTCTGACCACTTCGACCAGGCAGACCACTaGCCATGGATGGGCCGGGGCCCTAGTTCTCCGAGCTTTACACAC +
Preference number: 1 (lower is better)
Translates to: PQVREHSDHFDQADH*PWMGRGPSSPSFTH
Trigger: GTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAGAATGTTCTCGCACTTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GCAGGCATGGCTGTTGCAGACTTGAACCTGAGTGGGCGTGCTCACTaGACAGAGGGAGTGCAGCACGGCCTCCTCTTTCTGGAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: AGMAVADLNLSGRAH*TEGVQHGLLFLEGL
Trigger: AAGCCCTTCCAGAAAGAGGAGGCCGTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCTGCAACAGCCATGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp AACACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGTTGTTTTTaGGGCACCGTCCCAGCACACAGCCCTCCTGTGCCTCGGGTCTGG +
Preference number: 1 (lower is better)
Translates to: NTHSMQRQSTGACCF*GTVPAHSPPVPRVW
Trigger: CCAGACCCGAGGCACAGGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp CTTGAGGAAGGCCGGCCTTGCTGCATGCAGTGGACAGAGCGAGTCTaGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCATGGTGAT +
Preference number: 1 (lower is better)
Translates to: LEEGRPCCMQWTERV*TPPPQVTVHCCHGD
Trigger: ATCACCATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTCCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp GACACCACATACTCAAGCCACAAGCGGTCCCCTCTGCTGCAGGCATaGACTTGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTG +
Preference number: 1 (lower is better)
Translates to: DTTYSSHKRSPLLQA*TWFHICGPRGGTRV
Trigger: CACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGAGTATGTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR TCA 90 bp GTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTTaGGGAAGGCCGGCCTTGCTGCATGCAGTGGACAGAGCGAGTCTG +
Preference number: 1 (lower is better)
Translates to: VTGSEHRRLLMEQTT*GRPALLHAVDRASL
Trigger: CAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TCGTTCAGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTaGGAAGGTGAAGTCCCCTGGCCAGTCGATGCTCCAGCCCCCTGT +
Preference number: 1 (lower is better)
Translates to: SFRAVKGTLVFKRGP*EGEVPWPVDAPAPC
Trigger: ACAGGGGGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCTGAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp ACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTaGCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACT +
Preference number: 1 (lower is better)
Translates to: TERVWTPPPQVTVHC*HGDEYQLATAMLYT
Trigger: AGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTAAAGGAACGCTaGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCCCCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: VGPGAYSRSGRLKER*YSNVVPAKVKSPGQ
Trigger: CTGGCCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACCAGGACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp AAGCCACAGGTTGCAGAACACTCACTCCATGCAGAGGCAATCCACTaGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCC +
Preference number: 1 (lower is better)
Translates to: KPQVAEHSLHAEAIH*SLLFLGHRPSTQPS
Trigger: GGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp CGCTCCACTCCCCTGGCAACCAATAGGCTGGGCAGGAGAAAGCGTTaGATATCTTGGGCTCTGTTGCTGGCTTGGTTCTTACACTGCAGA +
Preference number: 1 (lower is better)
Translates to: RSTPLATNRLGRRKR*ISWALLLAWFLHCR
Trigger: TCTGCAGTGTAAGAACCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TCTCTTCCTCACACCCAAGCCACAGGTTGCAGAACACTCACTCCATaGAGAGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCC +
Preference number: 1 (lower is better)
Translates to: SLPHTQATGCRTLTP*RGNPLEPVVFGAPS
Trigger: GGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp CAAGCGGTCCCCTCTGCTGCAGGCATGAACTTGGTTTCACATCTGTaGCCCACGCGGTGGCACCAGAGTGACTTGCAAATGTCCTTCATA +
Preference number: 1 (lower is better)
Translates to: QAVPSAAGMNLVSHL*PTRWHQSDLQMSFI
Trigger: TATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR TCA 90 bp CATGAACTTGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTaGCTTGCAAATGTCCTTCATAACCCCAAGGCTGCACAGCTTGGC +
Preference number: 1 (lower is better)
Translates to: HELGFTSVAHAVAPE*LANVLHNPKAAQLG
Trigger: GCCAAGCTGTGCAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR TCA 90 bp CACCATACTGAGGCTTGGGGTTACTACAGTGTCTCTCCTGGAACTTaGCTCCTCCGCCGCAAGTGCGAGAACATTCTGACCACTTCGACC +
Preference number: 1 (lower is better)
Translates to: HHTEAWGYYSVSPGT*LLRRKCENILTTST
Trigger: GGTCGAAGTGGTCAGAATGTTCTCGCACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGACACTGTAGTAACCCCAAGCCTCAGTATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp TCTGCTGCAGGCATGAACTTGGTTTCACATCTGTGGCCCACGCGGTaGCACCAGAGTGACTTGCAAATGTCCTTCATAACCCCAAGGCTG +
Preference number: 1 (lower is better)
Translates to: SAAGMNLVSHLWPTR*HQSDLQMSFITPRL
Trigger: CAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR TCA 90 bp GCCAGGTGTGGTGGTATCTCTTGGTGGCTGGCTGAGTTACATTCATaGCCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGC +
Preference number: 1 (lower is better)
Translates to: ARCGGISWWLAELHS*PWEVHTSKRSPDSC
Trigger: GCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATACCACCACACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp GACTGCACTGTGCGCCAGGTGTGGTGGTATCTCTTGGTGGCTGGCTaGGTTACATTCATGACCTTGGGAAGTGCATACTTCCAAGCGATC +
Preference number: 1 (lower is better)
Translates to: DCTVRQVWWYLLVAG*VTFMTLGSAYFQAI
Trigger: GATCGCTTGGAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATACCACCACACCTGGCGCACAGTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GTCAGACTGCACTGTGCGCCAGGTGTGGTGGTATCTCTTGGTGGCTaGCTGAGTTACATTCATGACCTTGGGAAGTGCATACTTCCAAGC +
Preference number: 1 (lower is better)
Translates to: VRLHCAPGVVVSLGG*LSYIHDLGKCILPS
Trigger: GCTTGGAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATACCACCACACCTGGCGCACAGTGCAGTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp CATCTTTCTTTTCAGGAGCTGGACAGAAGTTGGTGTTACAGGCTCTaGGCACCGGAGGCTTCTGATGGAGCAGACAACTTGAGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: HLSFQELDRSWCYRL*APEASDGADNLRKA
Trigger: GGCCTTCCTCAAGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTCTGTCCAGCTCCTGAAAAGAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp CTCAACGCATTTCAGTTCTCTCTTCCTCACACCCAAGCCACAGGTTaGAGAACACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGTT +
Preference number: 1 (lower is better)
Translates to: LNAFQFSLPHTQATG*RTLTPCRGNPLEPV
Trigger: AACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGAAGAGAGAACTGAAATGCGTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp CCCCTGGCAACCAATAGGCTGGGCAGGAGAAAGCGTTGCATATCTTaGGCTCTGTTGCTGGCTTGGTTCTTACACTGCAGAATGAGGAAT +
Preference number: 1 (lower is better)
Translates to: PLATNRLGRRKRCIS*ALLLAWFLHCRMRN
Trigger: ATTCCTCATTCTGCAGTGTAAGAACCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp ATTTGTGGTTGCAGACTCCGTGCTGAGGGACCAGGTGACACCAGCTaGAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: ICGCRLRAEGPGDTS*RNPRKMGHLSFQEL
Trigger: CAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTGTCACCTGGTCCCTCAGCACGGAGTCTGCAACCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp GCCTTGTGTCAGAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTaGTGCATACAGTCGTTCAGGGCGGTTAAAGGAACGCTGGTATTC +
Preference number: 1 (lower is better)
Translates to: ALCQNFKDQRLIRGS*CIQSFRAVKGTLVF
Trigger: GAATACCAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTCTGACACAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp AGGACAAGGGTTAATGTTGCACAGCTTGTAGATGCGGCTAGATCCTaGACAGTACTTGCCACCATACTGAGGCTTGGGGTTACTACAGTG +
Preference number: 1 (lower is better)
Translates to: RTRVNVAQLVDAARS*TVLATILRLGVTTV
Trigger: CACTGTAGTAACCCCAAGCCTCAGTATGGTGGCAAGTACTGTCCAGGATCTAGCCGCATCTACAAGCTGTGCAACATTAACCCTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp TTGCAAACACCACATGCATCAGAAACCGCCTTAGAGCCAAGCTCATaGTCACATCCCACCAGTTCACAAATCCCATCGATGCAGACGTCA +
Preference number: 1 (lower is better)
Translates to: LQTPHASETALEPSS*SHPTSSQIPSMQTS
Trigger: TGACGTCTGCATCGATGGGATTTGTGAACTGGTGGGATGTGACCATGAGCTTGGCTCTAAGGCGGTTTCTGATGCATGTGGTGTTTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 90 bp TCTGAGGAGGGTGAGGAGACCCCAAGATCAGCTCTTCCTTGTGCATaGTCTACAGCACTGCTTTCCATAAAATTTGTGGTTGCAGACTCC +
Preference number: 1 (lower is better)
Translates to: SEEGEETPRSALPCA*STALLSIKFVVADS
Trigger: GGAGTCTGCAACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGATCTTGGGGTCTCCTCACCCTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TTTCCAACGGTACAACCATCCACGGAAGGGCTTGTTGTTATACTCTaGACACTGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGG +
Preference number: 1 (lower is better)
Translates to: FPTVQPSTEGLVVIL*TLLGTEIQAILRTR
Trigger: CCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATGGTTGTACCGTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp GTATCTCTTGGTGGCTGGCTGAGTTACATTCATGACCTTGGGAAGTaGATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCAGAAT +
Preference number: 1 (lower is better)
Translates to: VSLGGWLSYIHDLGK*ILPSDPRILALCQN
Trigger: ATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TTAATGTTGCGGCATCTCCGCTCCGGGAATGTTATTAGTTTCCCCTaGAAGGTCTTCTCAACGCATTTCAGTTCTCTCTTCCTCACACCC +
Preference number: 1 (lower is better)
Translates to: LMLRHLRSGNVISFP*KVFSTHFSSLFLTP
Trigger: GGGTGTGAGGAAGAGAGAACTGAAATGCGTTGAGAAGACCTTGCAGGGGAAACTAATAACATTCCCGGAGCGGAGATGCCGCAACATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 90 bp TTGCAAACACCACATGCATCAGAAACCGCCTTAGAGCCAAGCTCATaGTCACATCCCACCAGCTTCAACTTTTGTGTAGGGTTTCCAACG +
Preference number: 1 (lower is better)
Translates to: LQTPHASETALEPSS*SHPTSFNFCVGFPT
Trigger: CGTTGGAAACCCTACACAAAAGTTGAAGCTGGTGGGATGTGACCATGAGCTTGGCTCTAAGGCGGTTTCTGATGCATGTGGTGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR GCA 90 bp TTGTGTCAGAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTaGATACAGTCGTTCAGGGCGGTTAAAGGAACGCTGGTATTCAAA +
Preference number: 1 (lower is better)
Translates to: LCQNFKDQRLIRGSW*IQSFRAVKGTLVFK
Trigger: TTTGAATACCAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTCTGACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 90 bp TGCTTTGTGCTGACTGAGGTACAGGCCCTTATAAAACTTGCAAGTTaGGTTATCGCCTTTGCAAACACCACATGCATCAGAAACCGCCTT +
Preference number: 1 (lower is better)
Translates to: CFVLTEVQALIKLAS*VIAFANTTCIRNRL
Trigger: AAGGCGGTTTCTGATGCATGTGGTGTTTGCAAAGGCGATAACTCAACTTGCAAGTTTTATAAGGGCCTGTACCTCAGTCAGCACAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 90 bp TCACCTTGCCAGACATGGCAAAGAAAAACTCAAAGTTCTCCGCCTTaGAGTAGAGTTTACATCGATCTTCCTCTTCAACTTTTGTGTAGG +
Preference number: 1 (lower is better)
Translates to: SPCQTWQRKTQSSPP*SRVYIDLPLQLLCR
Trigger: CCTACACAAAAGTTGAAGAGGAAGATCGATGTAAACTCTACTGCAAGGCGGAGAACTTTGAGTTTTTCTTTGCCATGTCTGGCAAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CCA 90 bp AATTTTCTAAGCATTCCGATAATATGTGTGGAGCGTTATAAATGGTaGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACC +
Preference number: 1 (lower is better)
Translates to: NFLSIPIICVERYKW*ACPSFKHAISPVST
Trigger: GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATAACGCTCCACACATATTATCGGAATGCTTAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR TCA 90 bp CTGTCCCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTaGCTTATCTCAGTACAATCCATCTCTCGTCTTCTGAATCACAGT +
Preference number: 1 (lower is better)
Translates to: LSQSQRSSHFVKMKT*LISVQSISRLLNHS
Trigger: ACTGTGATTCAGAAGACGAGAGATGGATTGTACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTGCATGCGCTCCACTCCCCACTGAGCAGTCAGACTaGACTGTGCGCCAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LAALLAAGTGLAACAPLPTEQSD*TVRQVW
Trigger: CCACACCTGGCGCACAGTGCAGTCTGACTGCTCAGT...GGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCAGCAGACCACTGGCCATaGATGGGCCGGGGCCCTAGT +
Preference number: 2 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPADHWP*MGRGPS
Trigger: ACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGC...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTACTGAGACCAGGGGCTaGGGCTCCACTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPTETRG*GSTLEG
Trigger: GCCCTCCAGAGTGGAGCCCCAGCCCCTGGTCTCAGT...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTCCCTGCGAAGGTGAAGTCCCCTGGCCAGTCGATGCTCCAGCCCCCTGTGAGGTGTATGCGATGGCTCTaGGTCTCAGTCCTTGACCTG +
Preference number: 2 (lower is better)
Translates to: VPAKVKSPGQSMLQPPVRCMRWL*VSVLDL
Trigger: CAGGTCAAGGACTGAGACTCAGAGCCATCGCATACA...CCTCACAGGGGGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GTCCCTGCGAAGGTGAAGTCCCCTGGCCAGTCGATGCTCCAGCCCCCTGTGAGGACCAGACAGCCAGCCTaGGGTGTACTGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: VPAKVKSPGQSMLQPPVRTRQPA*GVLRNF
Trigger: GAAATTCCTCAGTACACCGCAGGCTGGCTGTCTGGT...CCTCACAGGGGGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp GTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCAGAAGGTGAAGTCCCCTaGCCAGTCGATGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: VDRASLDSSPAGYCALLPEGEVP*PVDAPA
Trigger: GGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTC...TGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTGCTGGGGCTCCACTCTaGAGGGCAGGCATGGCTGTT +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPAGAPL*RAGMAV
Trigger: AACAGCCATGCCTGCCCTCCAGAGTGGAGCCCCAGC...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp GAACACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGTTGTTTTaGGGGCACCGTCCCAGCACACAGCCCTCCTGTGCCTCGGGTCTG +
Preference number: 2 (lower is better)
Translates to: EHSLHAEAIHWSLLF*GHRPSTQPSCASGL
Trigger: CAGACCCGAGGCACAGGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CGCCACCGCCATGCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGGTCTCTCCTGGAACTTaGCTCCTCCGCCGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: RHRHAVHWASPLVAGFFQVSPGT*LLRRKC
Trigger: GCACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGAC...CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGCATGGCGGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTGCATGCGCTCCACTCCCCGCTGAGTTACATTCATaGCCTTGGGAAGTGCATACT +
Preference number: 2 (lower is better)
Translates to: LAALLAAGTGLAACAPLPAELHS*PWEVHT
Trigger: AGTATGCACTTCCCAAGGTCATGAATGTAACTCAGC...GGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CGCCACCGCCATGCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGGAAGGTGAAGTCCCCTaGCCAGTCGATGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: RHRHAVHWASPLVAGFFQEGEVP*PVDAPA
Trigger: GGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTC...CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGCATGGCGGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp GTTGCAGAACACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGTaGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCCTGTGCCTCG +
Preference number: 2 (lower is better)
Translates to: VAEHSLHAEAIHWSL*FLGHRPSTQPSCAS
Trigger: CGAGGCACAGGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp GACACCATCAAGCCACAAGCGGTCCCCTCTGCTGCAGGCATGAACTaGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTGACTTG +
Preference number: 2 (lower is better)
Translates to: DTIKPQAVPSAAGMN*VSHLWPTRWHQSDL
Trigger: CAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGATGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTACTCATGCGCAATGGTaGAGGCCAGGCCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPTHAQW*RPGQVL
Trigger: CAGGACTTGGCCTGGCCTTCACCATTGCGCATGAGT...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTACTGGACAGAGGGAGTaGAGCACGGCCTCCTCTTTC +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPTGQRE*STASSF
Trigger: GAAAGAGGAGGCCGTGCTGCACTCCCTCTGTCCAGT...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AAATTTGTGGTTGCAGACTCCGTGCTGAGGGACCAGGTGACACCAGCTGAAGAAGACCAGGCAGACCACTaGCCATGGATGGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: KFVVADSVLRDQVTPAEEDQADH*PWMGRG
Trigger: GCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTC...TTCTTCAGCTGGTGTCACCTGGTCCCTCAGCACGGAGTCTGCAACCACAAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp CACATACTCAAGCCACAAGCGGTCCCCTCTGCTGCAGGCATGAACTaGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTGACTTG +
Preference number: 2 (lower is better)
Translates to: HILKPQAVPSAAGMN*VSHLWPTRWHQSDL
Trigger: CAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGAGTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp AAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTAGTCTCTCCTGGAACTTaGCTCCTCCGCCGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: KTSVSFVGPGAYSRSGRLVSPGT*LLRRKC
Trigger: GCACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGAC...TAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTTGGTTTCACATCTGTaGCCCACGCGGTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGLVSHL*PTRWHQ
Trigger: CTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCCAGCGTCTCATTCGTaGGTCCTGGTGCATACAGTC +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPPASHS*VLVHTV
Trigger: GACTGTATGCACCAGGACCCACGAATGAGACGCTGG...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCATGTGGCAACCAATAGGCTaGGCAGGAGAAAGCGTTGCA +
Preference number: 2 (lower is better)
Translates to: GQSESGLLPRRLLCTVAMWQPIG*AGESVA
Trigger: TGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCA...CATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCAAAATGTCAAATCCTGTaGGGAGGATGGCGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPKCQIL*GGWRGR
Trigger: ACGACCACGCCATCCTCCTCACAGGATTTGACATTT...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CGCCACCGCCATGCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGGCTGCAGGACGACCATaGAAACACCCCATTGTTTCC +
Preference number: 2 (lower is better)
Translates to: RHRHAVHWASPLVAGFFQAAGRP*KHPIVS
Trigger: GGAAACAATGGGGTGTTTTCATGGTCGTCCTGCAGC...CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGCATGGCGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCACCATCTTGGCATCTaGCACAACAAGGGTCTCCAC +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPHHLGI*HNKGLH
Trigger: GTGGAGACCCTTGTTGTGGCAGATGCCAAGATGGTG...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GTTGCAGACTTGAACCTGAGTGGGCGTGCTCACTGGACAGAGGGAGTGCAGCACGCTTCTCCACCATCTTaGCATCTGCCACAACAAGGG +
Preference number: 2 (lower is better)
Translates to: VADLNLSGRAHWTEGVQHASPPS*HLPQQG
Trigger: CCCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGC...GTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ATGACCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCACCACTGGCCATGGATaGGCCGGGGCCCTAGTTCTC +
Preference number: 2 (lower is better)
Translates to: MTLGSAYFQAIPGFLPCVTTGHG*AGALVL
Trigger: GAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGT...GACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACAGAAGTTGGTGTTACGACCAGGCAGACCACTaGCCATGGATGGGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: PRKMGHLSFQELDRSWCYDQADH*PWMGRG
Trigger: GCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTC...GTAACACCAACTTCTGTCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCAAAGCGTTGCATATCTTaGGCTCTGTTGCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPKRCIS*ALLLAW
Trigger: CCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTT...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TCCTCACACCCAAGCCACAGGTTGCAGAACACTCACTCCATGCAGAGGCAATCCCTCGTCCACAGGTCTTaGAACACTGAGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SSHPSHRLQNTHSMQRQSLVHRS*NTETRG
Trigger: GCCCCTGGTCTCAGTGTTCCAAGACCTGTGGACGAG...GGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCAGTCCTGTGTCTTCATTaGTGGTACAGCTTCGGTACT +
Preference number: 2 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPVLCLH*WYSFGT
Trigger: AGTACCGAAGCTGTACCATCAATGAAGACACAGGAC...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCATCATTTGCTTTGTGCTaGCTGAGGTACAGGCCCTTA +
Preference number: 2 (lower is better)
Translates to: VDRASLDSSPAGYCALLPSFALC*LRYRPL
Trigger: TAAGGGCCTGTACCTCAGTCAGCACAAAGCAAATGA...TGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCACACCATCATGAACCATaGCAAAGTTGTGCCCTGACT +
Preference number: 2 (lower is better)
Translates to: VDRASLDSSPAGYCALLPHHHEP*QSCALT
Trigger: AGTCAGGGCACAACTTTGGCATGGTTCATGATGGTG...TGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTAACAAGCGGTCCCCTCTaGTGCAGGCATGAACTTGGT +
Preference number: 2 (lower is better)
Translates to: KTSVSFVGPGAYSRSGRLTSGPL*CRHELG
Trigger: ACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGT...TAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGTTCAAACGTGGTCCCTaGGAAGGTGAAGTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWFKRGP*EGEVPW
Trigger: CCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAA...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCATGACCTTGGGAAGTaGATACTTCCAAGCGATCCC +
Preference number: 2 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPHDLGK*ILPSDP
Trigger: GGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATG...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACAGAAGTTGGTGTTACCGCCGGCACAGGACTTaGTGCATGCGCTCCACTCCC +
Preference number: 2 (lower is better)
Translates to: PRKMGHLSFQELDRSWCYRRHRT*CMRSTP
Trigger: GGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCG...GTAACACCAACTTCTGTCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTTGCAGACTTGAACCTGAGTGGGCGTGCTCACTGGACAGAGGGAGTGCAGCACGTCCTGTGTCTTCATTaGTGGTACAGCTTCGGTACT +
Preference number: 2 (lower is better)
Translates to: VADLNLSGRAHWTEGVQHVLCLH*WYSFGT
Trigger: AGTACCGAAGCTGTACCATCAATGAAGACACAGGAC...GTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TCCTCACACCCAAGCCACAGGTTGCAGAACACTCACTCCATGCAGAGGCAATCCGCTGCAGGACGACCATaGAAACACCCCATTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SSHPSHRLQNTHSMQRQSAAGRP*KHPIVS
Trigger: GGAAACAATGGGGTGTTTTCATGGTCGTCCTGCAGC...GGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp AAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTAAGTGCGAGAACATTCTaGCCACTTCGACCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: KTSVSFVGPGAYSRSGRLSARTF*PLRPGR
Trigger: TCTGCCTGGTCGAAGTGGTCAGAATGTTCTCGCACT...TAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCATCTTACACTGCAGAATaGGGAATTGACTTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPSYTAE*GIDLGV
Trigger: CACACCCAAGTCAATTCCTCATTCTGCAGTGTAAGA...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCGCGGTGGCACCAGAGTaGCTTGCAAATGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTAVAPE*LANVLR
Trigger: CCTCAGGACATTTGCAAGTCACTCTGGTGCCACCGC...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGACGTCATCCTTGCCGTaGTTCTCCACCATCTTGGCA +
Preference number: 2 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWTSSLP*FSTILA
Trigger: TGCCAAGATGGTGGAGAAGCACGGCAAGGATGACGT...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCATATCTTGGGCTCTGTTaGTGGCTTGGTTCTTACACT +
Preference number: 2 (lower is better)
Translates to: VDRASLDSSPAGYCALLPYLGLC*WLGSYT
Trigger: AGTGTAAGAACCAAGCCAGCAACAGAGCCCAAGATA...TGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTACTGTCCCGTTTGCTTaGGCTCATCCACCAGACAGC +
Preference number: 2 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTTVPFA*AHPPDS
Trigger: GCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGT...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGCAAGGCTGCACAGCTTaGCTTTGGCTCCAAATTGCC +
Preference number: 2 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWQGCTA*LWLQIA
Trigger: GGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTG...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGCCGAGCTTTACACACTaGCCTTGCCGACACCACATA +
Preference number: 2 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWPSFTH*PCRHHI
Trigger: TATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGG...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTTAGAGCCAAGCTCATaGTCACATCCCACCAGCTTC +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGLEPSS*SHPTSF
Trigger: GAAGCTGGTGGGATGTGACCATGAGCTTGGCTCTAA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCAAGCGTTGCATATCTTaGGCTCTGTTGCTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGKRCIS*ALLLAW
Trigger: CCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTT...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGGTCTGGGGCTGCTaGAGCACAGGCTCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGRVWGC*STGSRG
Trigger: TCCCCGAGAGCCTGTGCTCCAGCAGCCCCAGACCCG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp ATCTGTCCCGGGAGTTTGTCCGGATATTTATACTGTCCCGTTTGCTaGGGCTCATCCACCAGACAGCCAGCCTGCGGTGTACTGAGGAAT +
Preference number: 2 (lower is better)
Translates to: ICPGSLSGYLYCPVC*GSSTRQPACGVLRN
Trigger: ATTCCTCAGTACACCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCCCGGGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 90 bp AACTTGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTGACTaGCAAATGTCCTTCATAACCCCAAGGCTGCACAGCTTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: NLVSHLWPTRWHQSD*QMSFITPRLHSLAL
Trigger: CAAAGCCAAGCTGTGCAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 90 bp GTCCCCTGGCCAGTCGATGCTCCAGCCCCCTGTGAGGTAATACTTTaGACTGAGGCTTCGAACAGCAAGATAGCTGGAAGAAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: VPWPVDAPAPCEVIL*TEASNSKIAGRKLQ
Trigger: TTGCAGCTTTCTTCCAGCTATCTTGCTGTTCGAAGCCTCAGTCAAAAGTATTACCTCACAGGGGGCTGGAGCATCGACTGGCCAGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTTGACTTGGGTGTGTTaGTCTCGTAAGCAAATGGCC +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGLTWVC*SRKQMA
Trigger: GGCCATTTGCTTACGAGATCAACACACCCAAGTCAA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTGCACAGCTTGGCTTTaGCTCCAAATTGCCACTTAC +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGCTAWL*LQIATY
Trigger: GTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CCA 90 bp GAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGTTGGTTTCACATCTGTaGCCCACGCGGTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: EFQRPASHSWVLVHTVVQLVSHL*PTRWHQ
Trigger: CTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAA...CTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTGTGGTGGTATCTCTTaGTGGCTGGCTGAGTTACAT +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGCGGIS*WLAELH
Trigger: ATGTAACTCAGCCAGCCACCAAGAGATACCACCACA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TCCTCACACCCAAGCCACAGGTTGCAGAACACTCACTCCATGCAGAGGCAATCCCTTGGGCTCTGTTGCTaGCTTGGTTCTTACACTGCA +
Preference number: 2 (lower is better)
Translates to: SSHPSHRLQNTHSMQRQSLGLCC*LGSYTA
Trigger: TGCAGTGTAAGAACCAAGCCAGCAACAGAGCCCAAG...GGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp ATAAATCTGTCCCGGGAGTTTGTCCGGATATTTATACTGTCCCGTTaGCTTGGGCTCATCCACCAGACAGCCAGCCTGCGGTGTACTGAG +
Preference number: 2 (lower is better)
Translates to: INLSREFVRIFILSR*LGLIHQTASLRCTE
Trigger: CTCAGTACACCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCCCGGGACAGATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 90 bp TCTCAACGCATTTCAGTTCTCTCTTCCTCACACCCAAGCCACAGGTaGCAGAACACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SQRISVLSSSHPSHR*QNTHSMQRQSTGAC
Trigger: ACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGAAGAGAGAACTGAAATGCGTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CGGATATTTATACTGTCCCGTTTGCTTGGGCTCATCCACCAGACAGCCAGCCTGGACTGGTCTGCATGGTaGTTGATCAGCAGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: RIFILSRLLGLIHQTASLDWSAW*LISSPS
Trigger: TGAAGGACTGCTGATCAATCACCATGCAGACCAGTC...CAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp ATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCTTTCCCACAAGAGCTaGCTGCCACTGACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: ISKTSVSFVGPGAYSRSGLSHKS*LPLTEA
Trigger: AGCTTCTGTCAGTGGCAGTCAGCTCTTGTGGGAAAG...CCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTAAATGTCAAATCCTGTaGGGAGGATGGCGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTKCQIL*GGWRGR
Trigger: ACGACCACGCCATCCTCCTCACAGGATTTGACATTT...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CTGGCAACCAATAGGCTGGGCAGGAGAAAGCGTTGCATATCTTGGGCTCTGTTGTCAGTGTGGGTGACATaGTGTTGCCTTCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: LATNRLGRRKRCISWALLSVWVT*CCLLLS
Trigger: GGAAAGCAGAAGGCAACATCATGTCACCCACACTGA...CAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGATCCACCGCAGGTGACTaGGCAGTCAGACTGCACTGT +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGSTAGD*AVRLHC
Trigger: ACAGTGCAGTCTGACTGCTCAGTCACCTGCGGTGGA...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCTGCAGAATGAGGAATTaGCTTGGGTGTGTTGATCTC +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGCRMRN*LGCVDL
Trigger: GAGATCAACACACCCAAGTCAATTCCTCATTCTGCA...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp ATCCTGGACAGTACTTGCCACCATACTGAGGCTTGGGGTTACTACAGTGTCTCTACAAGCGGTCCCCTCTaGTGCAGGCATGAACTTGGT +
Preference number: 2 (lower is better)
Translates to: ILDSTCHHTEAWGYYSVSTSGPL*CRHELG
Trigger: ACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGT...AGAGACACTGTAGTAACCCCAAGCCTCAGTATGGTGGCAAGTACTGTCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCCGATCCCCGGATTCTTaGCTTGTGTCAGAATTTCAA +
Preference number: 2 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGRSPDS*LVSEFQ
Trigger: TTGAAATTCTGACACAAGGCAAGAATCCGGGGATCG...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACAGAAGTTGGTGTTACGGACGGGTAAGGTCTTaGTCTGAGGAGGGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: PRKMGHLSFQELDRSWCYGRVRS*SEEGEE
Trigger: CTCCTCACCCTCCTCAGACCAAGACCTTACCCGTCC...GTAACACCAACTTCTGTCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCTCCTCTTTCTGGAAGGGCTTCTTCTGCACACACCGTATCTTGCGGCTCTGCTTACTCTGCACACTGTTaGGCACGGAAATCCAAGCTA +
Preference number: 2 (lower is better)
Translates to: PPLSGRASSAHTVSCGSAYSAHC*ARKSKL
Trigger: TAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTA...AGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAAAGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTAGTGGGCGTGCTCACTaGACAGAGGGAGTGCAGCAC +
Preference number: 2 (lower is better)
Translates to: AILSLLMPINSWLPTIETSGRAH*TEGVQH
Trigger: GTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACT...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACTCGTCCACAGGTCTTaGAACACTGAGACCAGGGGC +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGLVHRS*NTETRG
Trigger: GCCCCTGGTCTCAGTGTTCCAAGACCTGTGGACGAG...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp CCCAAGGCTGCACAGCTTGGCTTTGGCTCCAAATTGCCACTTACATaGCATGTCGGCATCATAAATCTGTCCCGGGAGTTTGTCCGGATA +
Preference number: 2 (lower is better)
Translates to: PKAAQLGFGSKLPLT*HVGIINLSREFVRI
Trigger: TATCCGGACAAACTCCCGGGACAGATTTATGATGCCGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 90 bp GTCCTTCATAACCCCAAGGCTGCACAGCTTGGCTTTGGCTCCAAATaGCCACTTACATTGCATGTCGGCATCATAAATCTGTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: VLHNPKAAQLGFGSK*PLTLHVGIINLSRE
Trigger: CTCCCGGGACAGATTTATGATGCCGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGGGGTTATGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp CCTCCTCTTTCTGGAAGGGCTTCTTCTGCACACACCGTATCTTGCGGCTCTGCTTCATCTGAGACGTGGTaGAATGCTGTTACTCATGGA +
Preference number: 2 (lower is better)
Translates to: PPLSGRASSAHTVSCGSASSETW*NAVTHG
Trigger: TCCATGAGTAACAGCATTTCACCACGTCTCAGATGA...AGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAAAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TCCTCACACCCAAGCCACAGGTTGCAGAACACTCACTCCATGCAGAGGCAATCCCAAGGGTCTCCACATTaGGACCATTTTGTGACTTTC +
Preference number: 2 (lower is better)
Translates to: SSHPSHRLQNTHSMQRQSQGSPH*DHFVTF
Trigger: GAAAGTCACAAAATGGTCTCAATGTGGAGACCCTTG...GGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGAGTGCGAGAACATTCTaGCCACTTCGACCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: EFQRPASHSWVLVHTVVQSARTF*PLRPGR
Trigger: TCTGCCTGGTCGAAGTGGTCAGAATGTTCTCGCACT...CTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTTCATTTGCTTTGTGCTaGCTGAGGTACAGGCCCTTA +
Preference number: 2 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTSFALC*LRYRPL
Trigger: TAAGGGCCTGTACCTCAGTCAGCACAAAGCAAATGA...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AAATTTGTGGTTGCAGACTCCGTGCTGAGGGACCAGGTGACACCAGCTGAAGAACATGATGTTGCCTTCTaGTTTCCTGCAGGGATTGCC +
Preference number: 2 (lower is better)
Translates to: KFVVADSVLRDQVTPAEEHDVAF*FPAGIA
Trigger: GGCAATCCCTGCAGGAAAGCAGAAGGCAACATCATG...TTCTTCAGCTGGTGTCACCTGGTCCCTCAGCACGGAGTCTGCAACCACAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp TGGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTGACTTGCAAATGTCCTGCTTTGGCTCCAAATTaGCACTTACATTGCATGTCG +
Preference number: 2 (lower is better)
Translates to: WFHICGPRGGTRVTCKCPALAPN*HLHCMS
Trigger: CGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGC...AGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR GCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGAGGGGAGTGTCTCCGCTaGAGGGCTTTTACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGGECLR*RAFTKD
Trigger: GTCCTTTGTAAAAGCCCTGCAGCGGAGACACTCCCC...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCGAGCGTTATAAATGGTaGGCTTGTCCCTCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: RAVKGTLVFKRGPCEGEVERYKW*ACPSFK
Trigger: CTTGAAGGAGGGACAAGCCCACCATTTATAACGCTC...GACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ATCAGCTCTTCCTTGTGCATGATCTACAGCACTGCTTTCCATAAAATTTGTGGTGCAGACCACTGGCCATaGATGGGCCGGGGCCCTAGT +
Preference number: 2 (lower is better)
Translates to: ISSSLCMIYSTAFHKICGADHWP*MGRGPS
Trigger: ACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGC...ACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TCTGCACACTGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGCTACAGTGTCTCTCCTaGAACTTGACTCCTCCGCCG +
Preference number: 2 (lower is better)
Translates to: SAHCWARKSKLFSGQGLMLQCLS*NLTPPP
Trigger: CGGCGGAGGAGTCAAGTTCCAGGAGAGACACTGTAG...CATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp CAGACGTCATTTCTGTGTGGGGAACAAGGCGTCCCATCTTTCACCTaGCCAGACATGGCAAAGAAAAACTCAAAGTTCTCCGCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: QTSFLCGEQGVPSFT*PDMAKKNSKFSALQ
Trigger: CTGCAAGGCGGAGAACTTTGAGTTTTTCTTTGCCATGTCTGGCAAGGTGAAAGATGGGACGCCTTGTTCCCCACACAGAAATGACGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GCCAAGCTCATGGTCACATCCCACCAGCTTCAACTTTTGTGTAGGGTTTCCAACAGAGCTGACTGCCACTaGCAGAAGCTGTTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: AKLMVTSHQLQLLCRVSNRADCH*QKLFRD
Trigger: GTCTCTAAACAGCTTCTGTCAGTGGCAGTCAGCTCT...GTTGGAAACCCTACACAAAAGTTGAAGCTGGTGGGATGTGACCATGAGCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTCAGCCTGCGGTGTACTaGGGAATTTCTTTAGATACT +
Preference number: 2 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTQPAVY*GISLDT
Trigger: AGTATCTAAAGAAATTCCTCAGTACACCGCAGGCTG...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTAGCACCGGAGGCTTCTaGTGGAGCAGACAACTTGAG +
Preference number: 2 (lower is better)
Translates to: AILSLLMPINSWLPTIETSTGGF*WSRQLE
Trigger: CTCAAGTTGTCTGCTCCATCAGAAGCCTCCGGTGCT...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGTTGCACAGCGACTGGTCTGCATGGTaGTTGATCAGCAGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: CWARKSKLFSGQGLMLHSDWSAW*LISSPS
Trigger: GGAAGGACTGCTGATCAATCACCATGCAGACCAGTC...GCTGTGCAACATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCAATTCCATCCCTGTATaGGATGGCTCTGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTNSIPV*DGSESQ
Trigger: CTGAGACTCAGAGCCATCGCATACAGGGATGGAATT...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp ATGACCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCCACCATCATGAACCATaGCAAAGTTGTGCCCTGACT +
Preference number: 2 (lower is better)
Translates to: MTLGSAYFQAIPGFLPCVHHHEP*QSCALT
Trigger: AGTCAGGGCACAACTTTGGCATGGTTCATGATGGTG...GACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGGGCTTGTTGTTATACTCTGCACACTGTTGGGCACGGAAATCCAAGCTATTCTAGCGGTCCCCTCTGCTaGAGGCATGAACTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: RACCYTLHTVGHGNPSYSSGPLC*RHELGF
Trigger: GAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCT...AGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp TTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCAGCGGTCCCCTCTGCTaGAGGCATGAACTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LRAILSLLMPINSWLPTISGPLC*RHELGF
Trigger: GAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCT...GATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGATGGAAGGGCTTCTTCTaGACACACCGTATCTTGCGG +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGWKGFF*THRILR
Trigger: CCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCA...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGGGACGGGTAAGGTCTTaGTCTGAGGAGGGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RRRVAICPFFKPYGISSVGRVRS*SEEGEE
Trigger: CTCCTCACCCTCCTCAGACCAAGACCTTACCCGTCC...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ATTTCTTTAGATACTGTCGGCTGCAGGACGACCATGAAAACACCCCATTGTTTCGGACGGGTAAGGTCTTaGTCTGAGGAGGGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: ISLDTVGCRTTMKTPHCFGRVRS*SEEGEE
Trigger: CTCCTCACCCTCCTCAGACCAAGACCTTACCCGTCC...GAAACAATGGGGTGTTTTCATGGTCGTCCTGCAGCCGACAGTATCTAAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp CAGAGTGACTTGCAAATGTCCTTCATAACCCCAAGGCTGCACAGCTaGGCTTTGGCTCCAAATTGCCACTTACATTGCATGTCGGCATCA +
Preference number: 2 (lower is better)
Translates to: QSDLQMSFITPRLHS*ALAPNCHLHCMSAS
Trigger: TGATGCCGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTAGTCCTGGGGCAAATTaGAACTTGTCAGTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: FHGIQELMVATGIGTKKASPGAN*NLSVGR
Trigger: CCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACT...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR-3UTR TCA 90 bp GCTATTCTCAGGACAAGGGTTAATGTTGCACAGCTTGTAGATGCGGCTAGATCCAGAGCTGACTGCCACTaGCAGAAGCTGTTTAGAGAC +
Preference number: 2 (lower is better)
Translates to: AILRTRVNVAQLVDAARSRADCH*QKLFRD
Trigger: GTCTCTAAACAGCTTCTGTCAGTGGCAGTCAGCTCT...GGATCTAGCCGCATCTACAAGCTGTGCAACATTAACCCTTGTCCTGAGAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGACTTTCCCACAAGAGCTaGCTGCCACTGACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGLSHKS*LPLTEA
Trigger: AGCTTCTGTCAGTGGCAGTCAGCTCTTGTGGGAAAG...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGATCAGTGTGGGTGACATaGTGTTGCCTTCTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGSVWVT*CCLLLS
Trigger: GGAAAGCAGAAGGCAACATCATGTCACCCACACTGA...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCAGAATTCCTCTGCTGCAGGCATaGACTTGGTTTCACATCTGT +
Preference number: 2 (lower is better)
Translates to: LGSAYFQAIPGFLPCVRIPLLQA*TWFHIC
Trigger: ACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGG...AATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTGGTAATACTTTTGACTaGGGCTTCGAACAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTGNTFD*GFEQQD
Trigger: ATCTTGCTGTTCGAAGCCTCAGTCAAAAGTATTACC...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGCTTTCCTGCAGGGATTaGCTTCACCATCATGAACCA +
Preference number: 2 (lower is better)
Translates to: EFQRPASHSWVLVHTVVQLSCRD*LHHHEP
Trigger: TGGTTCATGATGGTGAAGGCAATCCCTGCAGGAAAG...CTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GCTATTCTCAGGACAAGGGTTAATGTTGCACAGCTTGTAGATGCGGCTAGATCCTGCCTTCTGCTTTCCTaGAGGGATTGCCTTCACCAT +
Preference number: 2 (lower is better)
Translates to: AILRTRVNVAQLVDAARSCLLLS*RDCLHH
Trigger: ATGGTGAAGGCAATCCCTGCAGGAAAGCAGAAGGCA...GGATCTAGCCGCATCTACAAGCTGTGCAACATTAACCCTTGTCCTGAGAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp ATGACCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCTTAGATACTGTCGGCTaGAGGACGACCATGAAAACA +
Preference number: 2 (lower is better)
Translates to: MTLGSAYFQAIPGFLPCVLDTVG*RTTMKT
Trigger: TGTTTTCATGGTCGTCCTGCAGCCGACAGTATCTAA...GACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCCCACTGAGCACCATTTaGTGTCAAGAGTTTGACACA +
Preference number: 2 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTPLSTI*CQEFDT
Trigger: TGTGTCAAACTCTTGACACCAAATGGTGCTCAGTGG...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGCCATCTCTCGTCTTCTaGATCACAGTGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: EFQRPASHSWVLVHTVVQPSLVF*ITVQTK
Trigger: TTTGGTTTGCACTGTGATTCAGAAGACGAGAGATGG...CTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTTCATCTGAGACGTGGTaGAATGCTGTTACTCATGGA +
Preference number: 2 (lower is better)
Translates to: FHGIQELMVATGIGTKKASSETW*NAVTHG
Trigger: TCCATGAGTAACAGCATTTCACCACGTCTCAGATGA...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR-3UTR CCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAGCTTCTCCACCATCTTaGCATCTGCCACAACAAGGG +
Preference number: 2 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLASPPS*HLPQQG
Trigger: CCCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGC...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CAA 90 bp GTACAACCATCCACGGAAGGGCTTGTTGTTATACTCTGCACACTGTaGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGTT +
Preference number: 2 (lower is better)
Translates to: VQPSTEGLVVILCTL*GTEIQAILRTRVNV
Trigger: AACATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATGGTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp AGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCATAAAACTTGCAAGTTaGGTTATCGCCTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: RAVKGTLVFKRGPCEGEVIKLAS*VIAFAN
Trigger: GTTTGCAAAGGCGATAACTCAACTTGCAAGTTTTAT...GACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGTGGTCGTGTCTCTTaGCATTCTTTCCCACAAGAG +
Preference number: 2 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGRGRVS*HSFPQE
Trigger: CTCTTGTGGGAAAGAATGGCAAGAGACACGACCACG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGTGCCTTCTGCTTTCCTaGAGGGATTGCCTTCACCAT +
Preference number: 2 (lower is better)
Translates to: RRRVAICPFFKPYGISSVCLLLS*RDCLHH
Trigger: ATGGTGAAGGCAATCCCTGCAGGAAAGCAGAAGGCA...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CACCAGCTGAAGAAATCCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACGATCCCCGGATTCTTaGCTTGTGTCAGAATTTCAA +
Preference number: 2 (lower is better)
Translates to: HQLKKSTQDGSSFFSGAGRSPDS*LVSEFQ
Trigger: TTGAAATTCTGACACAAGGCAAGAATCCGGGGATCG...TCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGTTGCACAGCCCACTGAGCACCATTTaGTGTCAAGAGTTTGACACA +
Preference number: 2 (lower is better)
Translates to: CWARKSKLFSGQGLMLHSPLSTI*CQEFDT
Trigger: TGTGTCAAACTCTTGACACCAAATGGTGCTCAGTGG...GCTGTGCAACATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGGGTGGTATCTCTTGGTaGCTGGCTGAGTTACATTCA +
Preference number: 2 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRGGISW*LAELHS
Trigger: TGAATGTAACTCAGCCAGCCACCAAGAGATACCACC...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp GTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGGTTTGTAGTCTaGATACGAAGACCTAGAGATGGACGGGTAAGGTCTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: VHSLNPMGFPLWFVV*IRRPRDGRVRSWSE
Trigger: CTCAGACCAAGACCTTACCCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGGGTTTAAAGAATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCCCCACTTTGTCAAAATaGAAACTTGACTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTPTLSK*KLDLSQ
Trigger: CTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGG...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGCTCAGAGAAGAGAGGTaGGAACACGTAAGAATAGGC +
Preference number: 2 (lower is better)
Translates to: RRRVAICPFFKPYGISSVLREER*EHVRIG
Trigger: GCCTATTCTTACGTGTTCTCACCTCTCTTCTCTGAG...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR-3UTR TCA 90 bp AAATTTGTGGTTGCAGACTCCGTGCTGAGGGACCAGGTGACACCAGCTGAAGAAGACTTGCAAATGTCCTaGGGAATTTCTTTAGATACT +
Preference number: 2 (lower is better)
Translates to: KFVVADSVLRDQVTPAEEDLQMS*GISLDT
Trigger: AGTATCTAAAGAAATTCCTCAGGACATTTGCAAGTC...TTCTTCAGCTGGTGTCACCTGGTCCCTCAGCACGGAGTCTGCAACCACAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGTTATACTGTCCCGTTTaGTTGGGCTCATCCACCAGA +
Preference number: 2 (lower is better)
Translates to: RRRVAICPFFKPYGISSVLYCPV*LGSSTR
Trigger: TCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAA...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR GCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCATAAAATTTGTGGTTaGAGACTCCGTGCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: AILSLLMPINSWLPTIETHKICG*RLRAEG
Trigger: TCCCTCAGCACGGAGTCTGCAACCACAAATTTTATG...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTATGGGATTTCCTCTGTaGTTTGTAGTCTTGATACGA +
Preference number: 2 (lower is better)
Translates to: FHGIQELMVATGIGTKKAMGFPL*FVVLIR
Trigger: TCGTATCAAGACTACAAACCACAGAGGAAATCCCAT...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR-3UTR CCA 90 bp ATCAGCTCTTCCTTGTGCATGATCTACAGCACTGCTTTCCATAAAATTTGTGGTACGGCCTCCTCTTTCTaGAAGGGCTTCTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: ISSSLCMIYSTAFHKICGTASSF*KGFFCT
Trigger: TGTGCAGAAGAAGCCCTTCCAGAAAGAGGAGGCCGT...ACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 90 bp AGGCTCACAACCACAATGTTTATGTCGCTTCCAATGGTCCCATCTTaGAACAGGCTAGAAACCATGTTCATGACTGTGAGAATGTACGTG +
Preference number: 2 (lower is better)
Translates to: RLTTTMFMSLPMVPS*NRLETMFMTVRMYV
Trigger: CACGTACATTCTCACAGTCATGAACATGGTTTCTAGCCTGTTCAAAGATGGGACCATTGGAAGCGACATAAACATTGTGGTTGTGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACCATCTCTCGTCTTCTaGATCACAGTGCAAACCAAA +
Preference number: 2 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGPSLVF*ITVQTK
Trigger: TTTGGTTTGCACTGTGATTCAGAAGACGAGAGATGG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATCAAGGGTCTCCACATTaGGACCATTTTGTGACTTTC +
Preference number: 2 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYQGSPH*DHFVTF
Trigger: GAAAGTCACAAAATGGTCTCAATGTGGAGACCCTTG...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCATCCAGTCAGTGTGGGTaGCATGATGTTGCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSSSQCG*HDVAFC
Trigger: GCAGAAGGCAACATCATGTCACCCACACTGACTGGA...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGACGTCATCCTTGCCGTaGTTCTCCACCATCTTGGCA +
Preference number: 2 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMTSSLP*FSTILA
Trigger: TGCCAAGATGGTGGAGAAGCACGGCAAGGATGACGT...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCAGAATTATAAAACTTGCAAGTTaGGTTATCGCCTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: LGSAYFQAIPGFLPCVRIIKLAS*VIAFAN
Trigger: GTTTGCAAAGGCGATAACTCAACTTGCAAGTTTTAT...AATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGAGGTAATACTTTTGACTaGGGCTTCGAACAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGGNTFD*GFEQQD
Trigger: ATCTTGCTGTTCGAAGCCTCAGTCAAAAGTATTACC...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGCATGATGTTGCCTTCTaGTTTCCTGCAGGGATTGCC +
Preference number: 2 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMHDVAF*FPAGIA
Trigger: GGCAATCCCTGCAGGAAAGCAGAAGGCAACATCATG...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp TCCTGTGTCTTCATTGATGGTACAGCTTCGGTACTTACTGCACATGCCACTGATATGGGATTTCCTCTGTaGTTTGTAGTCTTGATACGA +
Preference number: 2 (lower is better)
Translates to: SCVFIDGTASVLTAHATDMGFPL*FVVLIR
Trigger: TCGTATCAAGACTACAAACCACAGAGGAAATCCCAT...ATCAGTGGCATGTGCAGTAAGTACCGAAGCTGTACCATCAATGAAGACACAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR TCA 90 bp TCCTGTGTCTTCATTGATGGTACAGCTTCGGTACTTACTGCACATGCCACTGATCCCACTTTGTCAAAATaGAAACTTGACTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: SCVFIDGTASVLTAHATDPTLSK*KLDLSQ
Trigger: CTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGG...ATCAGTGGCATGTGCAGTAAGTACCGAAGCTGTACCATCAATGAAGACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCCATGACCTTGGGAAGTaGATACTTCCAAGCGATCCC +
Preference number: 2 (lower is better)
Translates to: LNETLQTLLKIDVFAVESHDLGK*ILPSDP
Trigger: GGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATG...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTACTCTGCACACTGTTaGGCACGGAAATCCAAGCTA +
Preference number: 2 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMYSAHC*ARKSKL
Trigger: TAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTA...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp GTACTTTTCCAATTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGTTAGATACTGTCGGCTaGAGGACGACCATGAAAACA +
Preference number: 2 (lower is better)
Translates to: VLFQLRAILSLLMPINSWLDTVG*RTTMKT
Trigger: TGTTTTCATGGTCGTCCTGCAGCCGACAGTATCTAA...CCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAATTGGAAAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR GCA 90 bp ATCAGCTCTTCCTTGTGCATGATCTACAGCACTGCTTTCCATAAAATTTGTGGTGTTATTAGTTTCCCCTaGAAGGTCTTCTCAACGCAT +
Preference number: 2 (lower is better)
Translates to: ISSSLCMIYSTAFHKICGVISFP*KVFSTH
Trigger: ATGCGTTGAGAAGACCTTGCAGGGGAAACTAATAAC...ACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTTGTGGTGGTATCTCTTaGTGGCTGGCTGAGTTACAT +
Preference number: 2 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSCGGIS*WLAELH
Trigger: ATGTAACTCAGCCAGCCACCAAGAGATACCACCACA...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp ATCAGCTCTTCCTTGTGCATGATCTACAGCACTGCTTTCCATAAAATTTGTGGTTCACCTTGCCAGACATaGCAAAGAAAAACTCAAAGT +
Preference number: 2 (lower is better)
Translates to: ISSSLCMIYSTAFHKICGSPCQT*QRKTQS
Trigger: ACTTTGAGTTTTTCTTTGCCATGTCTGGCAAGGTGA...ACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CAA 90 bp CATGTGACCCTGCCTCTAGAATGTTACTTGGGAATATGTTTCAAGTaGTTAATTTCAGTCTTGGAGACTCATTCTAGGCAGAATATACTT +
Preference number: 2 (lower is better)
Translates to: HVTLPLECYLGICFK*LISVLETHSRQNIL
Trigger: AAGTATATTCTGCCTAGAATGAGTCTCCAAGACTGAAATTAACAACTTGAAACATATTCCCAAGTAACATTCTAGAGGCAGGGTCACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTAAATGCTGTTACTCATaGAAAGATCTCTGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSKCCYS*KDLCEL
Trigger: CAACTCACAGAGATCTTTCCATGAGTAACAGCATTT...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR CCA 72 bp GCACACAGCCCTCCTGTGCCTCGGGTCTGGGGCTGCTaGAGCACAGGCTCTCGGGGAGTGTCTCCGCTGCAG +
Preference number: 3 (lower is better)
Translates to: AHSPPVPRVWGC*STGSRGVSPLQ
Trigger: CTGCAGCGGAGACACTCCCCGAGAGCCTGTGCTCCAGCAGCCCCAGACCCGAGGCACAGGAGGGCTGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTGCATaGGCTCCACTCCCCTGGCAACCAATAGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: AALLAAGTGLAA*APLPWQPIGWA
Trigger: TGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp ACCGTCCCAGCACACAGCCCTCCTGTGCCTCGGGTCTaGGGCTGCTGGAGCACAGGCTCTCGGGGAGTGTCT +
Preference number: 3 (lower is better)
Translates to: TVPAHSPPVPRV*GCWSTGSRGVS
Trigger: AGACACTCCCCGAGAGCCTGTGCTCCAGCAGCCCCAGACCCGAGGCACAGGAGGGCTGTGTGCTGGGACGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp TCTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTaGATGCGCTCCACTCCCCTGGCAACCAATAGGCTG +
Preference number: 3 (lower is better)
Translates to: SCGSAGRRHRTC*MRSTPLATNRL
Trigger: CAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GTATCTTGCGGCTCTGCTGGCCGCCGGCACAGGACTTaGTGCATGCGCTCCACTCCCCTGGCAACCAATAGG +
Preference number: 3 (lower is better)
Translates to: VSCGSAGRRHRT*CMRSTPLATNR
Trigger: CCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GGAGCAGACAACTTGAGGAAGGCCGGCCTTGCTGCATaGAGTGGACAGAGCGAGTCTGGACTCCTCCCCCGC +
Preference number: 3 (lower is better)
Translates to: GADNLRKAGLAA*SGQSESGLLPR
Trigger: GCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GGCTTCTTCTGCACACACCGTATCTTGCGGCTCTGCTaGCCGCCGGCACAGGACTTGCTGCATGCGCTCCAC +
Preference number: 3 (lower is better)
Translates to: GFFCTHRILRLC*PPAQDLLHALH
Trigger: GTGGAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GGCCGGCCTTGCTGCATGCAGTGGACAGAGCGAGTCTaGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGC +
Preference number: 3 (lower is better)
Translates to: GRPCCMQWTERV*TPPPQVTVHCC
Trigger: GCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp AAGGGCTTCTTCTGCACACACCGTATCTTGCGGCTCTaGTGGCCGCCGGCACAGGACTTGCTGCATGCGCTC +
Preference number: 3 (lower is better)
Translates to: KGFFCTHRILRL*WPPAQDLLHAL
Trigger: GAGCGCATGCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GCTGCTGGAGCACAGGCTCTCGGGGAGTGTCTCCGCTaGAGGGCTTTTACAAAGGACCTCACGCCTCCTCAC +
Preference number: 3 (lower is better)
Translates to: AAGAQALGECLR*RAFTKDLTPPH
Trigger: GTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGACACTCCCCGAGAGCCTGTGCTCCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CGGGGCCCTAGTTCTCCGAGCTTTACACACTGGCCTTaGCGACACCATCAAGCCACAAGCGGTCCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: RGPSSPSFTHWP*RHHQATSGPLC
Trigger: GCAGAGGGGACCGCTTGTGGCTTGATGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CCA 72 bp CGAGAACATTCTGACCACTTCGACCAGGCAGACCACTaGCCATGGATGGGCCGGGGCCCTAGTTCTCCGAGC +
Preference number: 3 (lower is better)
Translates to: REHSDHFDQADH*PWMGRGPSSPS
Trigger: GCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAGAATGTTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GCCGGCACAGGACTTGCTGCATGCGCTCCACTCCCCTaGCAACCAATAGGCTGGGCAGGAGAAAGCGTTGCA +
Preference number: 3 (lower is better)
Translates to: AGTGLAACAPLP*QPIGWAGESVA
Trigger: TGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp ATGGGCCGGGGCCCTAGTTCTCCGAGCTTTACACACTaGCCTTGCCGACACCATCAAGCCACAAGCGGTCCC +
Preference number: 3 (lower is better)
Translates to: MGRGPSSPSFTH*PCRHHQATSGP
Trigger: GGGACCGCTTGTGGCTTGATGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 72 bp AGGAACGCTGGTATTCAAACGTGGTCCCTGCGAAGGTaGAGTCCCCTGGCCAGTCGATGCTCCAGCCCCCTG +
Preference number: 3 (lower is better)
Translates to: RNAGIQTWSLRR*SPLASRCSSPL
Trigger: CAGGGGGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CGGGGCCCTAGTTCTCCGAGCTTTACACACTGGCCTTaGCGACACCACATACTCAAGCCACAAGCGGTCCCC +
Preference number: 3 (lower is better)
Translates to: RGPSSPSFTHWP*RHHILKPQAVP
Trigger: GGGGACCGCTTGTGGCTTGAGTATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR GCA 72 bp CTTTCTGGAAGGGCTTCTTCTGCACACACCGTATCTTaGGGCTCTGCTGGCCGCCGGCACAGGACTTGCTGC +
Preference number: 3 (lower is better)
Translates to: LSGRASSAHTVS*GSAGRRHRTCC
Trigger: GCAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp CTGACCACTTCGACCAGGCAGACCACTGGCCATGGATaGGCCGGGGCCCTAGTTCTCCGAGCTTTACACACT +
Preference number: 3 (lower is better)
Translates to: LTTSTRQTTGHG*AGALVLRALHT
Trigger: AGTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp AGACAACTTGAGGAAGGCCGGCCTTGCTGCATGCAGTaGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTT +
Preference number: 3 (lower is better)
Translates to: RQLEEGRPCCMQ*TERVWTPPPQV
Trigger: AACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTCCTCAAGTTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTaGCATGGTGATGAATACCAGCTCGCCACCGCCATG +
Preference number: 3 (lower is better)
Translates to: VWTPPPQVTVHC*HGDEYQLATAM
Trigger: CATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp ATGGGCCGGGGCCCTAGTTCTCCGAGCTTTACACACTaGCCTTGCCGACACCACATACTCAAGCCACAAGCG +
Preference number: 3 (lower is better)
Translates to: MGRGPSSPSFTH*PCRHHILKPQA
Trigger: CGCTTGTGGCTTGAGTATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGCCCCGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CCA 72 bp CATTCTGACCACTTCGACCAGGCAGACCACTGGCCATaGATGGGCCGGGGCCCTAGTTCTCCGAGCTTTACA +
Preference number: 3 (lower is better)
Translates to: HSDHFDQADHWP*MGRGPSSPSFT
Trigger: TGTAAAGCTCGGAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTCGAAGTGGTCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp TCCATGCAGAGGCAATCCACTGGAGCCTGTTGTTTTTaGGGCACCGTCCCAGCACACAGCCCTCCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: SMQRQSTGACCF*GTVPAHSPPVP
Trigger: AGGCACAGGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CCTTGCTGCATGCAGTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTATGGCTGTTGCAGACTaGAACCTGAGTGGGCGTGCT +
Preference number: 3 (lower is better)
Translates to: PCCMQWTERVWTPPPQVTMAVAD*NLSGRA
Trigger: AGCACGCCCACTCAGGTTCAAGTCTGCAACAGCCAT...AGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GTCCCTGCGAAGGTGAAGTCCCCTGGCCAGTCGATGCTCCAGCCCCCTGTGAGGTGTGAGGTAATACTTTaGACTGAGGCTTCGAACAGC +
Preference number: 3 (lower is better)
Translates to: VPAKVKSPGQSMLQPPVRCEVIL*TEASNS
Trigger: GCTGTTCGAAGCCTCAGTCAAAAGTATTACCTCACA...CCTCACAGGGGGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CCTTGCTGCATGCAGTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGGGCAGGAGAAAGCGTaGCATATCTTGGGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: PCCMQWTERVWTPPPQVTGQEKA*HILGSV
Trigger: AACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCC...AGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCACTGCATGCAGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTaGACTGTTGCCATGGTGATGAATACCAGCTCGCCA +
Preference number: 3 (lower is better)
Translates to: QSESGLLPRRLL*TVAMVMNTSSP
Trigger: TGGCGAGCTGGTATTCATCACCATGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CCTTGCCGACACCATCAAGCCACAAGCGGTCCCCTCTaGTGCAGGCATGAACTTGGTTTCACATCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: PCRHHQATSGPL*CRHELGFTSVA
Trigger: GGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGATGGTGTCGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CCA 72 bp GCTGCATGCGCTCCACTCCCCTGGCAACCAATAGGCTaGGCAGGAGAAAGCGTTGCATATCTTGGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: AACAPLPWQPIG*AGESVAYLGLC
Trigger: ACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGGAGTGGAGCGCATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CGCCACCGCCATGCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTGCTTCTCCACCATCTaGGCATCTGCCACAACAAGG +
Preference number: 3 (lower is better)
Translates to: RHRHAVHWASPLVAGFFQCFSTI*ASATTR
Trigger: CCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGCA...CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGCATGGCGGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp GGCCTTGATGCTTATATAACCTCCACCGCAGGTGACTaGGCAGTCAGACTGCACTGTGCGCCAGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: GLDAYITSTAGD*AVRLHCAPGVV
Trigger: CACCACACCTGGCGCACAGTGCAGTCTGACTGCTCAGTCACCTGCGGTGGAGGTTATATAAGCATCAAGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp AAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTaGTGGAGCAGACAACTTGAGGAAGGCCGGCCTTGC +
Preference number: 3 (lower is better)
Translates to: KLVLQALSTGGF*WSRQLEEGRPC
Trigger: GCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CCCGGGAGTTTGTCCGGATATTTATACTGTCCCGTTTaGTTGGGCTCATCCACCAGACAGCCAGCCTGCGGT +
Preference number: 3 (lower is better)
Translates to: PGSLSGYLYCPV*LGSSTRQPACG
Trigger: ACCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR GCA 72 bp CCGACACCACATACTCAAGCCACAAGCGGTCCCCTCTaGTGCAGGCATGAACTTGGTTTCACATCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: PTPHTQATSGPL*CRHELGFTSVA
Trigger: GGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTTGAGTATGTGGTGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR GCA 72 bp GCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTaGGAAGGTGAAGTCCCCTGGCCAGTCGATGCTCCA +
Preference number: 3 (lower is better)
Translates to: AVKGTLVFKRGP*EGEVPWPVDAP
Trigger: TGGAGCATCGACTGGCCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp CCCTCTGCTGCAGGCATGAACTTGGTTTCACATCTGTaGCCCACGCGGTGGCACCAGAGTGACTTGCAAATG +
Preference number: 3 (lower is better)
Translates to: PSAAGMNLVSHL*PTRWHQSDLQM
Trigger: CATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp ACTGTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATGCTGTACACTGGGCGCGTGGTCGTGTCTCTaGCCATTCTTTCCCACAAGA +
Preference number: 3 (lower is better)
Translates to: TVAMVMNTSSPPPCCTLGAWSCL*PFFPTR
Trigger: TCTTGTGGGAAAGAATGGCAAGAGACACGACCACGC...GCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp GGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTaGCTTGCAAATGTCCTTCATAACCCCAAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: GFTSVAHAVAPE*LANVLHNPKAA
Trigger: TGCAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR TCA 72 bp GAGGCTTGGGGTTACTACAGTGTCTCTCCTGGAACTTaGCTCCTCCGCCGCAAGTGCGAGAACATTCTGACC +
Preference number: 3 (lower is better)
Translates to: EAWGYYSVSPGT*LLRRKCENILT
Trigger: GGTCAGAATGTTCTCGCACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGACACTGTAGTAACCCCAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GTTGCCATGGTGATGAATACCAGCTCGCCACCGCCATaGTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: VAMVMNTSSPPP*CTLGKSFGCRL
Trigger: AAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGCATGGCGGTGGCGAGCTGGTATTCATCACCATGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp AAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTAGCGTGGTCGTGTCTCTaGCCATTCTTTCCCACAAGA +
Preference number: 3 (lower is better)
Translates to: KTSVSFVGPGAYSRSGRLAWSCL*PFFPTR
Trigger: TCTTGTGGGAAAGAATGGCAAGAGACACGACCACGC...TAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GTCTCCGCTGCAGGGCTTTTACAAAGGACCTCACGCCTCCTCACGCCTCGTCCATGTGAGGTAATACTTTaGACTGAGGCTTCGAACAGC +
Preference number: 3 (lower is better)
Translates to: VSAAGLLQRTSRLLTPRPCEVIL*TEASNS
Trigger: GCTGTTCGAAGCCTCAGTCAAAAGTATTACCTCACA...TGGACGAGGCGTGAGGAGGCGTGAGGTCCTTTGTAAAAGCCCTGCAGCGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGGGGCAGGAGAAAGCGTaGCATATCTTGGGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWGQEKA*HILGSV
Trigger: AACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCC...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GAAGTTGGTGTTACAGGCTCTGAGCACCGGAGGCTTCTGATGGAGCAGACAACTCACTGGGCAAGTCCTTaGGTTGCAGGCTTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: EVGVTGSEHRRLLMEQTTHWASP*VAGFFQ
Trigger: CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTG...AGTTGTCTGCTCCATCAGAAGCCTCCGGTGCTCAGAGCCTGTAACACCAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp AGGCAATCCACTGGAGCCTGTTGTTTTTGGGGCACCGTCCCAGCACACAGCCCTGTCCCATCTTTCACCTaGCCAGACATGGCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: RQSTGACCFWGTVPAHSPVPSFT*PDMAKK
Trigger: TTTCTTTGCCATGTCTGGCAAGGTGAAAGATGGGAC...AGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 72 bp CCTGAATCTCAATGCTTCGGGCCCCAGCGGGGATGGTaGCCACAGGGTAATACTCATTTGCTTTGTGCTGAC +
Preference number: 3 (lower is better)
Translates to: PESQCFGPQRGW*PQGNTHLLCAD
Trigger: GTCAGCACAAAGCAAATGAGTATTACCCTGTGGTCACCATCCCCGCTGGGGCCCGAAGCATTGAGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CCCCTGGCAACCAATAGGCTGGGCAGGAGAAAGCGTTaGATATCTTGGGCTCTGTTGCTGGCTTGGTTCTTA +
Preference number: 3 (lower is better)
Translates to: PLATNRLGRRKR*ISWALLLAWFL
Trigger: TAAGAACCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp CACACCCAAGCCACAGGTTGCAGAACACTCACTCCATaGAGAGGCAATCCACTGGAGCCTGTTGTTTTTGGG +
Preference number: 3 (lower is better)
Translates to: HTQATGCRTLTP*RGNPLEPVVFG
Trigger: CCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GGAGTTTGTCCGGATATTTATACTGTCCCGTTTGCTTaGGCTCATCCACCAGACAGCCAGCCTGCGGTGTAC +
Preference number: 3 (lower is better)
Translates to: GVCPDIYTVPFA*AHPPDSQPAVY
Trigger: GTACACCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CCA 72 bp GGTGCATACAGTCGTTCAGGGCGGTTAAAGGAACGCTaGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: GAYSRSGRLKER*YSNVVPAKVKS
Trigger: GGACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp AGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTaGCTTCTTAATGTTGCGGCATCTCCGCTCCGGGAA +
Preference number: 3 (lower is better)
Translates to: SPLVAGFFQFQA*LLNVAASPLRE
Trigger: TTCCCGGAGCGGAGATGCCGCAACATTAAGAAGCCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp ACCAGCTTCAACTTTTGTGTAGGGTTTCCAACGGTACAACCATCCACGGAAGGGTGTCTCTCCTGGAACTaGACTCCTCCGCCGCAAGTG +
Preference number: 3 (lower is better)
Translates to: TSFNFCVGFPTVQPSTEGCLSWN*TPPPQV
Trigger: CACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGACA...CCCTTCCGTGGATGGTTGTACCGTTGGAAACCCTACACAAAAGTTGAAGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp GCTGTACACTGGGCAAGTCCTTTGGTTGCAGGCTTCTTCCAGTTCCAGGCTTGGCCACGGAAGGGCTTGTaGTTATACTCTGCACACTGT +
Preference number: 3 (lower is better)
Translates to: AVHWASPLVAGFFQFQAWPRKGL*LYSAHC
Trigger: ACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGG...CCAAGCCTGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTGTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp GTGCGCCAGGTGTGGTGGTATCTCTTGGTGGCTGGCTaGGTTACATTCATGACCTTGGGAAGTGCATACTTC +
Preference number: 3 (lower is better)
Translates to: VRQVWWYLLVAG*VTFMTLGSAYF
Trigger: GAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATACCACCACACCTGGCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp ACTGTGAGAATGTACGTGGTGACGTCATCCTTGCCGTaGTTCTCCACCATCTTGGCATCTGCCACAACAAGG +
Preference number: 3 (lower is better)
Translates to: TVRMYVVTSSLP*FSTILASATTR
Trigger: CCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGCACGGCAAGGATGACGTCACCACGTACATTCTCACAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp GGTGGCTGGCTGAGTTACATTCATGACCTTGGGAAGTaGATACTTCCAAGCGATCCCCGGATTCTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: GGWLSYIHDLGK*ILPSDPRILAL
Trigger: CAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GGCATGAACTTGGTTTCACATCTGTGGCCCACGCGGTaGCACCAGAGTGACTTGCAAATGTCCTTCATAACC +
Preference number: 3 (lower is better)
Translates to: GMNLVSHLWPTR*HQSDLQMSFIT
Trigger: GGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CCA 72 bp CACTGTGCGCCAGGTGTGGTGGTATCTCTTGGTGGCTaGCTGAGTTACATTCATGACCTTGGGAAGTGCATA +
Preference number: 3 (lower is better)
Translates to: HCAPGVVVSLGG*LSYIHDLGKCI
Trigger: TATGCACTTCCCAAGGTCATGAATGTAACTCAGCCAGCCACCAAGAGATACCACCACACCTGGCGCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GTGGACAGAGCGAGTCTGGACTCCTCCCCCGCAGGTTACTGTGCACTGTTGCCACCTCTAGAATGTTACTaGGGAATATGTTTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: VDRASLDSSPAGYCALLPPLECY*GICFKL
Trigger: CAACTTGAAACATATTCCCAAGTAACATTCTAGAGG...TGGCAACAGTGCACAGTAACCTGCGGGGGAGGAGTCCAGACTCGCTCTGTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp TCTGCACACTGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGTACTGTCCCGTTTGCTaGGGCTCATCCACCAGACAG +
Preference number: 3 (lower is better)
Translates to: SAHCWARKSKLFSGQGLMYCPVC*GSSTRQ
Trigger: CTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTA...CATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp GCCCTAGTTCTCCGAGCTTTACACACTGGCCTTGCCGACACCACATACTCAAGCATCTGTCCCGGGAGTTaGTCCGGATATTTATACTGT +
Preference number: 3 (lower is better)
Translates to: ALVLRALHTGLADTTYSSICPGS*SGYLYC
Trigger: ACAGTATAAATATCCGGACAAACTCCCGGGACAGAT...GCTTGAGTATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp AGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCGGCTTTGGCTCCAAATaGCCACTTACATTGCATGTC +
Preference number: 3 (lower is better)
Translates to: RAVKGTLVFKRGPCEGEVGFGSK*PLTLHV
Trigger: GACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCC...GACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp AGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCCCTGCGAAGGTGAAGTCTGGCACCAGAGTGACTaGCAAATGTCCTTCATAACC +
Preference number: 3 (lower is better)
Translates to: RAVKGTLVFKRGPCEGEVWHQSD*QMSFIT
Trigger: GGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCA...GACTTCACCTTCGCAGGGACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp GGTGCATACAGTCGTTCAGGGCGGTTAAAGGAACGCTGGTATTCAAACGTGGTCATACTCTGCACACTGTaGGGCACGGAAATCCAAGCT +
Preference number: 3 (lower is better)
Translates to: GAYSRSGRLKERWYSNVVILCTL*GTEIQA
Trigger: AGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTAT...GACCACGTTTGAATACCAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp AAGATGAAGCTTGCCAGTCCAGCAGCAAGCGCCCACTaGGCACCATTTGGTGTCAAGAGTTTGACACAAGAG +
Preference number: 3 (lower is better)
Translates to: KMKLASPAASAH*APFGVKSLTQE
Trigger: CTCTTGTGTCAAACTCTTGACACCAAATGGTGCTCAGTGGGCGCTTGCTGCTGGACTGGCAAGCTTCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR TCA 72 bp TGCAGACTCCGTGCTGAGGGACCAGGTGACACCAGCTaGAGAAATCCACGCAAGATGGGTCATCTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: CRLRAEGPGDTS*RNPRKMGHLSF
Trigger: AAAAGAAAGATGACCCATCTTGCGTGGATTTCTTCAGCTGGTGTCACCTGGTCCCTCAGCACGGAGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR GCA 72 bp AATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTaGATACAGTCGTTCAGGGCGGTTAAAGGAACGCTG +
Preference number: 3 (lower is better)
Translates to: NFKDQRLIRGSW*IQSFRAVKGTL
Trigger: CAGCGTTCCTTTAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp TGCCAGTCCAGCAGCAAGCGCCCACTGAGCACCATTTaGTGTCAAGAGTTTGACACAAGAGATTCCAAGCAA +
Preference number: 3 (lower is better)
Translates to: CQSSSKRPLSTI*CQEFDTRDSKQ
Trigger: TTGCTTGGAATCTCTTGTGTCAAACTCTTGACACCAAATGGTGCTCAGTGGGCGCTTGCTGCTGGACTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR CCA 72 bp CCACATGCATCAGAAACCGCCTTAGAGCCAAGCTCATaGTCACATCCCACCAGCTTCAACTTTTGTGTAGGG +
Preference number: 3 (lower is better)
Translates to: PHASETALEPSS*SHPTSFNFCVG
Trigger: CCCTACACAAAAGTTGAAGCTGGTGGGATGTGACCATGAGCTTGGCTCTAAGGCGGTTTCTGATGCATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CCA 72 bp CAGAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTaGTGCATACAGTCGTTCAGGGCGGTTAAAGGAACG +
Preference number: 3 (lower is better)
Translates to: QNFKDQRLIRGS*CIQSFRAVKGT
Trigger: CGTTCCTTTAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp CCACATGCATCAGAAACCGCCTTAGAGCCAAGCTCATaGTCACATCCCACCAGTTCACAAATCCCATCGATG +
Preference number: 3 (lower is better)
Translates to: PHASETALEPSS*SHPTSSQIPSM
Trigger: CATCGATGGGATTTGTGAACTGGTGGGATGTGACCATGAGCTTGGCTCTAAGGCGGTTTCTGATGCATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp ATGACCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCCCAATGGTCCCATCTTaGAACAGGCTAGAAACCATG +
Preference number: 3 (lower is better)
Translates to: MTLGSAYFQAIPGFLPCVPMVPS*NRLETM
Trigger: CATGGTTTCTAGCCTGTTCAAAGATGGGACCATTGG...GACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp TCTGCACACTGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGGTGGGTGACATGATGTaGCCTTCTGCTTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: SAHCWARKSKLFSGQGLMVGDMM*PSAFLQ
Trigger: CTGCAGGAAAGCAGAAGGCAACATCATGTCACCCAC...CATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGAGATGGAGCAGACAACTaGAGGAAGGCCGGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGDGADN*RKAGLA
Trigger: AGCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCCATC...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp GGTTTCACATCTGTGGCCCACGCGGTGGCACCAGAGTaGCTTGCAAATGTCCTGAGGAATTTCTTTAGATAC +
Preference number: 3 (lower is better)
Translates to: GFTSVAHAVAPE*LANVLRNFFRY
Trigger: GTATCTAAAGAAATTCCTCAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR GCA 72 bp CGGCATCTCCGCTCCGGGAATGTTATTAGTTTCCCCTaGAAGGTCTTCTCAACGCATTTCAGTTCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: RHLRSGNVISFP*KVFSTHFSSLF
Trigger: GAAGAGAGAACTGAAATGCGTTGAGAAGACCTTGCAGGGGAAACTAATAACATTCCCGGAGCGGAGATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp CAGGAACAAATGTCAAATCCTGTGAGGAGGATGGCGTaGTCGTGTCTCTTGCCATTCTTTCCCACAAGAGCT +
Preference number: 3 (lower is better)
Translates to: QEQMSNPVRRMA*SCLLPFFPTRA
Trigger: AGCTCTTGTGGGAAAGAATGGCAAGAGACACGACCACGCCATCCTCCTCACAGGATTTGACATTTGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp GTTAATGTTGCACAGCTTGTAGATGCGGCTAGATCCTaGACAGTACTTGCCACCATACTGAGGCTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: VNVAQLVDAARS*TVLATILRLGV
Trigger: AACCCCAAGCCTCAGTATGGTGGCAAGTACTGTCCAGGATCTAGCCGCATCTACAAGCTGTGCAACATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp TTCACAAATCCCATCGATGCAGACGTCATTTCTGTGTaGGGAACAAGGCGTCCCATCTTTCACCTTGCCAGA +
Preference number: 3 (lower is better)
Translates to: FTNPIDADVISV*GTRRPIFHLAR
Trigger: TCTGGCAAGGTGAAAGATGGGACGCCTTGTTCCCCACACAGAAATGACGTCTGCATCGATGGGATTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CGGATATTTATACTGTCCCGTTTGCTTGGGCTCATCCACCAGACAGCCAGCCTGACAAGGGTCTCCACATaGAGACCATTTTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: RIFILSRLLGLIHQTASLTRVST*RPFCDF
Trigger: AAAGTCACAAAATGGTCTCAATGTGGAGACCCTTGT...CAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp TTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCAGAATTCATCCACGGAAGGGCTaGTTGTTATACTCTGCACAC +
Preference number: 3 (lower is better)
Translates to: LGSAYFQAIPGFLPCVRIHPRKG*LLYSAH
Trigger: GTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATG...AATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp TTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCTCATCCCAGAGGAGAGAAGGTaGAGCCTTTGTAGAGGTTCT +
Preference number: 3 (lower is better)
Translates to: LSLLMPINSWLPTIETLIPEERR*SLCRGS
Trigger: AGAACCTCTACAAAGGCTCAACCTTCTCTCCTCTGG...GATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 72 bp GGCTCCCGACGATCGAAACTCTCATCTGAGACGTGGTaGAATGCTGTTACTCATGGAAAGATCTCTGTGAGT +
Preference number: 3 (lower is better)
Translates to: GSRRSKLSSETW*NAVTHGKISVS
Trigger: ACTCACAGAGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATCGTCGGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR GCA 72 bp GTACAACCATCCACGGAAGGGCTTGTTGTTATACTCTaGACACTGTTGGGCACGGAAATCCAAGCTATTCTC +
Preference number: 3 (lower is better)
Translates to: VQPSTEGLVVIL*TLLGTEIQAIL
Trigger: GAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATGGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GAATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGAAGTCCTGGGGCAAATaGAAACTTGTCAGTTGGAAG +
Preference number: 3 (lower is better)
Translates to: EFQRPASHSWVLVHTVVQKSWGK*KLVSWK
Trigger: CTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTT...CTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CCACGCAAGATGGGTCATCTTTCTTTTCAGGAGCTGGACAGAAGTTGGTGTTACCCAATGGTCCCATCTTaGAACAGGCTAGAAACCATG +
Preference number: 3 (lower is better)
Translates to: PRKMGHLSFQELDRSWCYPMVPS*NRLETM
Trigger: CATGGTTTCTAGCCTGTTCAAAGATGGGACCATTGG...GTAACACCAACTTCTGTCCAGCTCCTGAAAAGAAAGATGACCCATCTTGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCTGTCGTCGCTTCTCATaGTCAAGTGCTTTAGAGTAC +
Preference number: 3 (lower is better)
Translates to: YKWWACPSFKHAISPVSTCRRFS*SSALEY
Trigger: GTACTCTAAAGCACTTGACAATGAGAAGCGACGACA...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGATGCTTCTCCACCATCTaGGCATCTGCCACAACAAGG +
Preference number: 3 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRCFSTI*ASATTR
Trigger: CCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGCA...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp ATCAGCTCTTCCTTGTGCATGATCTACAGCACTGCTTTCCATAAAATTTGTGGTCCAAGGCTGCACAGCTaGGCTTTGGCTCCAAATTGC +
Preference number: 3 (lower is better)
Translates to: ISSSLCMIYSTAFHKICGPRLHS*ALAPNC
Trigger: GCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGG...ACCACAAATTTTATGGAAAGCAGTGCTGTAGATCATGCACAAGGAAGAGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR-3UTR CAA 90 bp TTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCTCATCCCTTCGGGTATGAATTaGAATTCCATGGAGGACTTA +
Preference number: 3 (lower is better)
Translates to: LSLLMPINSWLPTIETLIPSGMN*NSMEDL
Trigger: TAAGTCCTCCATGGAATTCAAATTCATACCCGAAGG...GATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTCATCCACGGAAGGGCTaGTTGTTATACTCTGCACAC +
Preference number: 3 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSHPRKG*LLYSAH
Trigger: GTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATG...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTGGCTCTGTTGCTGGCTaGGTTCTTACACTGCAGAAT +
Preference number: 3 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSGSVAG*VLTLQN
Trigger: ATTCTGCAGTGTAAGAACCAAGCCAGCAACAGAGCC...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 72 bp TTGCTGGCTTGGTTCTTACACTGCAGAATGAGGAATTaGCTTGGGTGTGTTGATCTCGTAAGCAAATGGCCT +
Preference number: 3 (lower is better)
Translates to: LLAWFLHCRMRN*LGCVDLVSKWP
Trigger: AGGCCATTTGCTTACGAGATCAACACACCCAAGTCAATTCCTCATTCTGCAGTGTAAGAACCAAGCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR TCA 72 bp CTGACTGAGGTACAGGCCCTTATAAAACTTGCAAGTTaGGTTATCGCCTTTGCAAACACCACATGCATCAGA +
Preference number: 3 (lower is better)
Translates to: LTEVQALIKLAS*VIAFANTTCIR
Trigger: TCTGATGCATGTGGTGTTTGCAAAGGCGATAACTCAACTTGCAAGTTTTATAAGGGCCTGTACCTCAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CCA 72 bp AGCATTCCGATAATATGTGTGGAGCGTTATAAATGGTaGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCA +
Preference number: 3 (lower is better)
Translates to: SIPIICVERYKW*ACPSFKHAISP
Trigger: TGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATAACGCTCCACACATATTATCGGAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR CCA 72 bp AATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATaGCATACAAGAGCTCATGGTTGCCACTGGGATAGG +
Preference number: 3 (lower is better)
Translates to: NLRRPSCYSSFP*HTRAHGCHWDR
Trigger: CCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR-3UTR CAA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGATTCTATTTTTCCTTGTaGACCAAGTCCTGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGFYFSL*TKSWGK
Trigger: TTTGCCCCAGGACTTGGTCAACAAGGAAAAATAGAA...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAACAAGGGTCTCCACATaGAGACCATTTTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLTRVST*RPFCDF
Trigger: AAAGTCACAAAATGGTCTCAATGTGGAGACCCTTGT...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGCATGAAAACACCCCATaGTTTCCAGTCAGTGTGGGT +
Preference number: 3 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMHENTP*FPVSVG
Trigger: ACCCACACTGACTGGAAACAATGGGGTGTTTTCATG...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR GCA 72 bp CAGACATGGCAAAGAAAAACTCAAAGTTCTCCGCCTTaGAGTAGAGTTTACATCGATCTTCCTCTTCAACTT +
Preference number: 3 (lower is better)
Translates to: QTWQRKTQSSPP*SRVYIDLPLQL
Trigger: AAGTTGAAGAGGAAGATCGATGTAAACTCTACTGCAAGGCGGAGAACTTTGAGTTTTTCTTTGCCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CCA 72 bp TCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTaGTTTGTAGTCTTGATACGAAGACCTAGAGATGGA +
Preference number: 3 (lower is better)
Translates to: SVHSLNPMGFPL*FVVLIRRPRDG
Trigger: TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTTCTATTTTTCCTTGTaGACCAAGTCCTGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMFYFSL*TKSWGK
Trigger: TTTGCCCCAGGACTTGGTCAACAAGGAAAAATAGAA...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTAAGATCAGCTCTTCCTaGTGCATGATCTACAGCACT +
Preference number: 3 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSKISSS*CMIYST
Trigger: AGTGCTGTAGATCATGCACAAGGAAGAGCTGATCTT...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR TCA 72 bp TGTCCCAAAGTCAACGAAGTTCCCACTTTGTCAAAATaGAAACTTGACTTATCTCAGTACAATCCATCTCTC +
Preference number: 3 (lower is better)
Translates to: CPKVNEVPTLSK*KLDLSQYNPSL
Trigger: GAGAGATGGATTGTACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR-3UTR CAA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCACCTCTAGAATGTTACTaGGGAATATGTTTCAAGTTG +
Preference number: 3 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSPLECY*GICFKL
Trigger: CAACTTGAAACATATTCCCAAGTAACATTCTAGAGG...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
3UTR CAA 72 bp AAGCCACAAGCGGTCCCCTCTGCTGCAGGCATGAACTaGGTTTCACATCTGTGGCCCACGCGGTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: KPQAVPSAAGMN*VSHLWPTRWHQ
Trigger: CTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp CTCCATGCAGAGGCAATCCACTGGAGCCTGTTGTTTTaGGGGCACCGTCCCAGCACACAGCCCTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LHAEAIHWSLLF*GHRPSTQPSCA
Trigger: GGCACAGGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp TCTTTCTGGAAGGGCTTCTTCTGCACACACCGTATCTaGCGGCTCTGCTGGCCGCCGGCACAGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: SFWKGFFCTHRI*RLCWPPAQDLL
Trigger: CAGCAAGTCCTGTGCCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCAGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp CACTCACTCCATGCAGAGGCAATCCACTGGAGCCTGTaGTTTTTGGGGCACCGTCCCAGCACACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HSLHAEAIHWSL*FLGHRPSTQPS
Trigger: GGAGGGCTGTGTGCTGGGACGGTGCCCCAAAAACAACAGGCTCCAGTGGATTGCCTCTGCATGGAGTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp GTTGCAGACTTGAACCTGAGTGGGCGTGCTCACTGGACAGAGGGAGTGCAGCACGAGGTAGCGGTGAGATaGGGAATTCATTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: VADLNLSGRAHWTEGVQHEVAVR*GIHCLG
Trigger: CCCGAGACAATGAATTCCTCATCTCACCGCTACCTC...GTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp GTCATCCTTGCCGTGCTTCTCCACCATCTTGGCATCTGCCACAACAAGGGTCTCTCGATGGCTGTACTCTaGCTCTTGGCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VILAVLLHHLGICHNKGLSMAVL*LLALGG
Trigger: GCCTCCCAGAGCCAAGAGCCAGAGTACAGCCATCGA...GAGACCCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGCACGGCAAGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp TCCCGGGAGTTTGTCCGGATATTTATACTGTCCCGTTaGCTTGGGCTCATCCACCAGACAGCCAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SREFVRIFILSR*LGLIHQTASLR
Trigger: CCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 72 bp TCACATCTGTGGCCCACGCGGTGGCACCAGAGTGACTaGCAAATGTCCTTCATAACCCCAAGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SHLWPTRWHQSD*QMSFITPRLHS
Trigger: GCTGTGCAGCCTTGGGGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCACCGCGTGGGCCACAGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
CDS-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTTCCTGGGCCAGCAGCTaGGGTAGCGGTGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKASWASS*GSGEMR
Trigger: CCTCATCTCACCGCTACCTCAGCTGCTGGCCCAGGA...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCGCACACACCGTATCTTaGGGCTCTGCTGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTAHTVS*GSAGRR
Trigger: CCGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGC...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp ATGACCTTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTTGTGTCCTGTACTCTGGCTCTTaGCTCTGGGAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: MTLGSAYFQAIPGFLPCVLYSGS*LWEAGG
Trigger: TCCCCCTGCCTCCCAGAGCCAAGAGCCAGAGTACAG...GACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAAGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp TTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCTCATCGCAGACCACTGGCCATaGATGGGCCGGGGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LSLLMPINSWLPTIETLIADHWP*MGRGPS
Trigger: ACTAGGGCCCCGGCCCATCCATGGCCAGTGGTCTGC...GATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCCTTTTGTACAGGACGTaGGGATGGTGGCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTLLYRT*GWWPAG
Trigger: GCCTGCAGGCCACCATCCTCACGTCCTGTACAAAAG...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp AGGCCAAGCTGTTATTCTTCATTTCCATGGCATACAAGAGCTCATGGTTGCCACGCAGCACAGCTGGAGTaGCTTGGCCAGACGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RPSCYSSFPWHTRAHGCHAAQLE*LGQTPQ
Trigger: CTGGGGCGTCTGGCCAAGGCACTCCAGCTGTGCTGC...GTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGCGCCGGCACAGGACTTaGTGCATGCGCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRRRHRT*CMRSTP
Trigger: GGGAGTGGAGCGCATGCAGCAAGTCCTGTGCCGGCG...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACCTCGGGTCTGGGGCTaGTGGAGCACAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGPRVWG*WSTGSR
Trigger: CCGAGAGCCTGTGCTCCAGCAGCCCCAGACCCGAGG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTGAAGGCCGGCCTTGCTaGATGCAGTGGACAGAGCGA +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAEGRPC*MQWTER
Trigger: TCGCTCTGTCCACTGCATGCAGCAAGGCCGGCCTTC...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGATGCTGCCGCTGTCACTaGCTAAGGCGACGGCCACCG +
Preference number: 4 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGCCRCH*LRRRPP
Trigger: CGGTGGCCGTCGCCTTAGCCAGTGACAGCGGCAGCA...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCTGTACTCTGGCTCTTaGCTCTGGGAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKALYSGS*LWEAGG
Trigger: TCCCCCTGCCTCCCAGAGCCAAGAGCCAGAGTACAG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp ATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGTCGATGGCTGTACTCTaGCTCTTGGCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ISKTSVSFVGPGAYSRSGSMAVL*LLALGG
Trigger: GCCTCCCAGAGCCAAGAGCCAGAGTACAGCCATCGA...CCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATCGGGTCTGGGGCTGCTaGAGCACAGGCTCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYRVWGC*STGSRG
Trigger: TCCCCGAGAGCCTGTGCTCCAGCAGCCCCAGACCCG...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp GGGAGTTTGTCCGGATATTTATACTGTCCCGTTTGCTaGGGCTCATCCACCAGACAGCCAGCCTGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: GSLSGYLYCPVC*GSSTRQPACGV
Trigger: TACACCGCAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCGGACAAACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
CDS-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTTCCACCGCAGGTGACTaGGCAGTCAGACTGCACTGT +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKASTAGD*AVRLHC
Trigger: ACAGTGCAGTCTGACTGCTCAGTCACCTGCGGTGGA...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp GCCCTAGTTCTCCGAGCTTTACACACTGGCCTTGCCGACACCACATACTCAAGCCGTCGTCCACAAAAATaGCGCTTTTGCCACCTTCGA +
Preference number: 4 (lower is better)
Translates to: ALVLRALHTGLADTTYSSRRPQK*RFCHLR
Trigger: TCGAAGGTGGCAAAAGCGGCATTTTTGTGGACGACG...GCTTGAGTATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGGAGAACTAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
CDS-3UTR CCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCCTGTACTCTGGCTCTTaGCTCTGGGAGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTLYSGS*LWEAGG
Trigger: TCCCCCTGCCTCCCAGAGCCAAGAGCCAGAGTACAG...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCTCGTCCACAGGTCTTaGAACACTGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKALVHRS*NTETRG
Trigger: GCCCCTGGTCTCAGTGTTCCAAGACCTGTGGACGAG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TCTTGCCATTCTTTCCCACAAGAGCTGACTGCCACTGACAGAAGCTGTTTAGAGCTTTTGTACAGGACGTaGGGATGGTGGCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SCHSFPQELTATDRSCLELLYRT*GWWPAG
Trigger: GCCTGCAGGCCACCATCCTCACGTCCTGTACAAAAG...CTCTAAACAGCTTCTGTCAGTGGCAGTCAGCTCTTGTGGGAAAGAATGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAATCCGCTGCCACCGCTaGTGCCGCTGTCACTGGCTA +
Preference number: 4 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLIRCHR*CRCHWL
Trigger: TAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGAT...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp AAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGCGGTTACAAAAATGCCGCTTTTaGCACCTTCGATGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KTSVSFVGPGAYSRSGRLQKCRF*HLRWLY
Trigger: GTACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTG...TAACCGCCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCTCCTCCGCCGCAAGTaGGAGAACATTCTGACCACT +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKALLRRK*ENILTT
Trigger: AGTGGTCAGAATGTTCTCGCACTTGCGGCGGAGGAG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCTCATCACTGAGCAGTCAGACTaGACTGTGCGCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSLLMPINSWLPTIETLITEQSD*TVRQVW
Trigger: CCACACCTGGCGCACAGTGCAGTCTGACTGCTCAGT...GATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGCCGGCCTTGCTGCATaGAGTGGACAGAGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LRAILSLLMPINSWLPTIAGLAA*SGQSES
Trigger: AGACTCGCTCTGTCCACTGCATGCAGCAAGGCCGGC...GATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGCAGAAGCAGCACAGCTaGAGTGCCTTGGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRQKQHS*SALARR
Trigger: GCGTCTGGCCAAGGCACTCCAGCTGTGCTGCTTCTG...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCCCGAGCTTTACACACTaGCCTTGCCGACACCACATA +
Preference number: 4 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTPSFTH*PCRHHI
Trigger: TATGTGGTGTCGGCAAGGCCAGTGTGTAAAGCTCGG...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCGACCAGGCAGACCACTaGCCATGGATGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VFAVESFDVQEYICGNKTDQADH*PWMGRG
Trigger: GCCCCGGCCCATCCATGGCCAGTGGTCTGCCTGGTC...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CGGATATTTATACTGTCCCGTTTGCTTGGGCTCATCCACCAGACAGCCAGCCTGCCTCTGCAGGAGGCTTaGGGGCATATACATTTCTTG +
Preference number: 4 (lower is better)
Translates to: RIFILSRLLGLIHQTASLPLQEA*GHIHFL
Trigger: CAAGAAATGTATATGCCCCCAAGCCTCCTGCAGAGG...CAGGCTGGCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAAATATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
CDS-3UTR TCA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGACCCCAGCGGGGATGGTaGCCACAGGGTAATACTCAT +
Preference number: 4 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGPQRGW*PQGNTH
Trigger: ATGAGTATTACCCTGTGGTCACCATCCCCGCTGGGG...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTGGCAACCAATAGGCTGGGCAGGAGAAAGCGTTGCATATCTTGGGCTCTGTTGCAAAAATGCCGCTTTTaGCACCTTCGATGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LATNRLGRRKRCISWALLQKCRF*HLRWLY
Trigger: GTACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTG...CAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTTCGATGGCTGTACTCTaGCTCTTGGCTCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AILSLLMPINSWLPTIETSMAVL*LLALGG
Trigger: GCCTCCCAGAGCCAAGAGCCAGAGTACAGCCATCGA...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGTTGGTTTCACATCTGTaGCCCACGCGGTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRLVSHL*PTRWHQ
Trigger: CTGGTGCCACCGCGTGGGCCACAGATGTGAAACCAA...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGAGTGGGCGTGCTCACTaGACAGAGGGAGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVSGRAH*TEGVQH
Trigger: GTGCTGCACTCCCTCTGTCCAGTGAGCACGCCCACT...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTAGACTTGAACCTGAGTaGGCGTGCTCACTGGACAGA +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKARLEPE*ACSLDR
Trigger: TCTGTCCAGTGAGCACGCCCACTCAGGTTCAAGTCT...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTGCTGGGGCTCCACTCTaGAGGGCAGGCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSAGAPL*RAGMAV
Trigger: AACAGCCATGCCTGCCCTCCAGAGTGGAGCCCCAGC...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp TTCATGACTGTGAGAATGTACGTGGTGACGTCATCCTaGCCGTGCTTCTCCACCATCTTGGCATCTGCCACA +
Preference number: 4 (lower is better)
Translates to: FMTVRMYVVTSS*PCFSTILASAT
Trigger: TGTGGCAGATGCCAAGATGGTGGAGAAGCACGGCAAGGATGACGTCACCACGTACATTCTCACAGTCATGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp GGTTTCCAACGGTACAACCATCCACGGAAGGGCTTGTaGTTATACTCTGCACACTGTTGGGCACGGAAATCC +
Preference number: 4 (lower is better)
Translates to: GFQRYNHPRKGL*LYSAHCWARKS
Trigger: GGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATGGTTGTACCGTTGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp GCCAAGCTCATGGTCACATCCCACCAGCTTCAACTTTaGTGTAGGGTTTCCAACGGTACAACCATCCACGGA +
Preference number: 4 (lower is better)
Translates to: AKLMVTSHQLQL*CRVSNGTTIHG
Trigger: TCCGTGGATGGTTGTACCGTTGGAAACCCTACACAAAAGTTGAAGCTGGTGGGATGTGACCATGAGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
CDS-3UTR TCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGCTTTTGTACAGGACGTaGGGATGGTGGCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVLLYRT*GWWPAG
Trigger: GCCTGCAGGCCACCATCCTCACGTCCTGTACAAAAG...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCTCCAGTCAGTGTGGGTaGCATGATGTTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTSSQCG*HDVAFC
Trigger: GCAGAAGGCAACATCATGTCACCCACACTGACTGGA...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCGAAAGCTGCAACTCCTaGATCTCAATGCTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTESCNS*ISMLRA
Trigger: GGCCCGAAGCATTGAGATTCAGGAGTTGCAGCTTTC...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGAAGCACCGGAGGCTTCTaGTGGAGCAGACAACTTGAG +
Preference number: 4 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGSTGGF*WSRQLE
Trigger: CTCAAGTTGTCTGCTCCATCAGAAGCCTCCGGTGCT...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGCGCTGCCACCGCTGCTaGCGCTGTCACTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMRCHRC*RCHWLR
Trigger: CCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCG...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGCATCATTTAATCCGCTaGCACCGCTGCTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRHHLIR*HRCCRC
Trigger: ACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATG...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGAGTGAGGATGGTGGCCTaGAGGCGAGCTATAGTTGTG +
Preference number: 4 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGVRMVA*RRAIVV
Trigger: CACAACTATAGCTCGCCTGCAGGCCACCATCCTCAC...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCTGGAAGGGCTTCTTCTaGACACACCGTATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTWKGFF*THRILR
Trigger: CCGCAAGATACGGTGTGTGCAGAAGAAGCCCTTCCA...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACACCACTGGCCATGGATaGGCCGGGGCCCTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYTTGHG*AGALVL
Trigger: GAGAACTAGGGCCCCGGCCCATCCATGGCCAGTGGT...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGACTGAGACCAGGGGCTaGGGCTCCACTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMTETRG*GSTLEG
Trigger: GCCCTCCAGAGTGGAGCCCCAGCCCCTGGTCTCAGT...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp TCCACGGAAGGGCTTGTTGTTATACTCTGCACACTGTaGGGCACGGAAATCCAAGCTATTCTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: STEGLVVILCTL*GTEIQAILRTR
Trigger: CCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp CTGGGCAGGAGAAAGCGTTGCATATCTTGGGCTCTGTaGCTGGCTTGGTTCTTACACTGCAGAATGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LGRRKRCISWAL*LAWFLHCRMRN
Trigger: ATTCCTCATTCTGCAGTGTAAGAACCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp TTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAGGTAGCGGTGAGATaGGGAATTCATTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LRAILSLLMPINSWLPTIEVAVR*GIHCLG
Trigger: CCCGAGACAATGAATTCCTCATCTCACCGCTACCTC...GATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTACTCATGCGCAATGGTaGAGGCCAGGCCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSTHAQW*RPGQVL
Trigger: CAGGACTTGGCCTGGCCTTCACCATTGCGCATGAGT...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACGTCTCTCCTGGAACTTaGCTCCTCCGCCGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYVSPGT*LLRRKC
Trigger: GCACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGAC...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTAACCTCCACCGCAGGTaGCTGAGCAGTCAGACTGCA +
Preference number: 4 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSNLHRR*LSSQTA
Trigger: TGCAGTCTGACTGCTCAGTCACCTGCGGTGGAGGTT...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTTGGGGGCATATTTCTTaGGTCGTCCACAAAAATGCC +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAWGHIS*VVHKNA
Trigger: GGCATTTTTGTGGACGACGCAAGAAATATGCCCCCA...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp AGGCCAAGCTGTTATTCTTCATTTCCATGGCATACAAGAGCTCATGGTTGCCACACGTCATCCTTGCCGTaGTTCTCCACCATCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RPSCYSSFPWHTRAHGCHTSSLP*FSTILA
Trigger: TGCCAAGATGGTGGAGAAGCACGGCAAGGATGACGT...GTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCACCATCATGAACCATaGCAAAGTTGTGCCCTGACT +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAHHHEP*QSCALT
Trigger: AGTCAGGGCACAACTTTGGCATGGTTCATGATGGTG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGAGGCAGGCATGGCTGTTaGAGACTTGAACCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGGRHGC*RLEPEW
Trigger: CCACTCAGGTTCAAGTCTGCAACAGCCATGCCTGCC...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCGATCGCCTTTTCCTGTaGTGCAAAATGTCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTDRLFL*CKMSCE
Trigger: TTCACACGACATTTTGCACCACAGGAAAAGGCGATC...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCAAGCGTTGCATATCTTaGGCTCTGTTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTKRCIS*ALLLAW
Trigger: CCAAGCCAGCAACAGAGCCCAAGATATGCAACGCTT...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp GCACAGCTTGGCTTTGGCTCCAAATTGCCACTTACATaGCATGTCGGCATCATAAATCTGTCCCGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AQLGFGSKLPLT*HVGIINLSREF
Trigger: AAACTCCCGGGACAGATTTATGATGCCGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 72 bp AACCCCAAGGCTGCACAGCTTGGCTTTGGCTCCAAATaGCCACTTACATTGCATGTCGGCATCATAAATCTG +
Preference number: 4 (lower is better)
Translates to: NPKAAQLGFGSK*PLTLHVGIINL
Trigger: CAGATTTATGATGCCGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212437.2
3UTR CAA 72 bp TTGGGAAGTGCATACTTCCAAGCGATCCCCGGATTCTaGCCTTGTGTCAGAATTTCAAAGACCAGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGSAYFQAIPGF*PCVRISKTSVS
Trigger: TGAGACGCTGGTCTTTGAAATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGATCCTGTCCAAATGCTaGAACTCGGTAGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRILSKC*NSVVQG
Trigger: TCCCTGCACTACCGAGTTTCAGCATTTGGACAGGAT...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp AGGCCAAGCTGTTATTCTTCATTTCCATGGCATACAAGAGCTCATGGTTGCCACGACTGGTCTGCATGGTaGTTGATCAGCAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPSCYSSFPWHTRAHGCHDWSAW*LISSPS
Trigger: TGAAGGACTGCTGATCAATCACCATGCAGACCAGTC...GTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCTCAGTGTGGGTGACATaGTGTTGCCTTCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRAILSLLMPINSWLPTISVWVT*CCLLLS
Trigger: GGAAAGCAGAAGGCAACATCATGTCACCCACACTGA...GATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCAGCCTGCGGTGTACTaGGGAATTTCTTTAGATACT +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAQPAVY*GISLDT
Trigger: AGTATCTAAAGAAATTCCTCAGTACACCGCAGGCTG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGCCAGGTGACACCAGCTaGAGAAATCCACGCAAGATG +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVPGDTS*RNPRKM
Trigger: CATCTTGCGTGGATTTCTTCAGCTGGTGTCACCTGG...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTCGATCCCCGGATTCTTaGCTTGTGTCAGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKARSPDS*LVSEFQ
Trigger: TTGAAATTCTGACACAAGGCAAGAATCCGGGGATCG...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGGGCAGGAGAAAGCGTTaGATATCTTGGGCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRGRRKR*ISWALL
Trigger: CAACAGAGCCCAAGATATGCAACGCTTTCTCCTGCC...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAACCCAAGCCACAGGTTaGAGAACACTCACTCCATGC +
Preference number: 4 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLTQATG*RTLTPC
Trigger: GCATGGAGTGAGTGTTCTGCAACCTGTGGCTTGGGT...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTGGCAAGTCCTTTGGTTaGAGGCTTCTTCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: AILSLLMPINSWLPTIETGKSFG*RLLPVP
Trigger: TGGAACTGGAAGAAGCCTGCAACCAAAGGACTTGCC...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTGTTACTGTGCACTGTTaGCATGGTGATGAATACCAG +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAVTVHC*HGDEYQ
Trigger: CTGGTATTCATCACCATGGCAACAGTGCACAGTAAC...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGAACTGTCCCGTTTGCTTaGGCTCATCCACCAGACAGC +
Preference number: 4 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRTVPFA*AHPPDS
Trigger: GCTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGT...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATCAAGGCTGCACAGCTTaGCTTTGGCTCCAAATTGCC +
Preference number: 4 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYQGCTA*LWLQIA
Trigger: GGCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTG...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGGAAGGTGAAGTCCCCTaGCCAGTCGATGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMEGEVP*PVDAPA
Trigger: GGCTGGAGCATCGACTGGCCAGGGGACTTCACCTTC...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCGGTGGTATCTCTTGGTaGCTGGCTGAGTTACATTCA +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTGGISW*LAELHS
Trigger: TGAATGTAACTCAGCCAGCCACCAAGAGATACCACC...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGACGGCCTCCTCTTTCTaGAAGGGCTTCTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVTASSF*KGFFCT
Trigger: TGTGCAGAAGAAGCCCTTCCAGAAAGAGGAGGCCGT...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp AGGCCAAGCTGTTATTCTTCATTTCCATGGCATACAAGAGCTCATGGTTGCCACACTGGGCAAGTCCTTTaGTTGCAGGCTTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RPSCYSSFPWHTRAHGCHTGQVL*LQASSS
Trigger: ACTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGT...GTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTCTTTCCCACAAGAGCTaGCTGCCACTGACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSLSHKS*LPLTEA
Trigger: AGCTTCTGTCAGTGGCAGTCAGCTCTTGTGGGAAAG...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTGTCCTGTGTCTTCATTaGTGGTACAGCTTCGGTACT +
Preference number: 4 (lower is better)
Translates to: AILSLLMPINSWLPTIETVLCLH*WYSFGT
Trigger: AGTACCGAAGCTGTACCATCAATGAAGACACAGGAC...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TTCCATGGCATACAAGAGCTCATGGTTGCCACTGGGATAGGGACAAAGAAGGCTGGTAATACTTTTGACTaGGGCTTCGAACAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: FHGIQELMVATGIGTKKAGNTFD*GFEQQD
Trigger: ATCTTGCTGTTCGAAGCCTCAGTCAAAAGTATTACC...AGCCTTCTTTGTCCCTATCCCAGTGGCAACCATGAGCTCTTGTATGCCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCTGCAGAATGAGGAATTaGCTTGGGTGTGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTCRMRN*LGCVDL
Trigger: GAGATCAACACACCCAAGTCAATTCCTCATTCTGCA...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGCAAAAATGCCGCTTTTaGCACCTTCGATGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRQKCRF*HLRWLY
Trigger: GTACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTG...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGACACCATCTTGGCATCTaGCACAACAAGGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRHHLGI*HNKGLH
Trigger: GTGGAGACCCTTGTTGTGGCAGATGCCAAGATGGTG...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTATGCCTTCTGCTTTCCTaGAGGGATTGCCTTCACCAT +
Preference number: 4 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLCLLLS*RDCLHH
Trigger: ATGGTGAAGGCAATCCCTGCAGGAAAGCAGAAGGCA...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCTTAGATACTGTCGGCTaGAGGACGACCATGAAAACA +
Preference number: 4 (lower is better)
Translates to: YKWWACPSFKHAISPVSTLDTVG*RTTMKT
Trigger: TGTTTTCATGGTCGTCCTGCAGCCGACAGTATCTAA...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCAGCGGTCCCCTCTGCTaGAGGCATGAACTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VFAVESFDVQEYICGNKTSGPLC*RHELGF
Trigger: GAAACCAAGTTCATGCCTGCAGCAGAGGGGACCGCT...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCTTCAAACGTGGTCCCTaGGAAGGTGAAGTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VFAVESFDVQEYICGNKTFKRGP*EGEVPW
Trigger: CCAGGGGACTTCACCTTCGCAGGGACCACGTTTGAA...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGACTGGACAGAGGGAGTaGAGCACGGCCTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMTGQRE*STASSF
Trigger: GAAAGAGGAGGCCGTGCTGCACTCCCTCTGTCCAGT...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTGCTTCTCCACCATCTTaGCATCTGCCACAACAAGGG +
Preference number: 4 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSASPPS*HLPQQG
Trigger: CCCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGC...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCCCAGCGTCTCATTCGTaGGTCCTGGTGCATACAGTC +
Preference number: 4 (lower is better)
Translates to: VFAVESFDVQEYICGNKTPASHS*VLVHTV
Trigger: GACTGTATGCACCAGGACCCACGAATGAGACGCTGG...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACTTGGGCTCTGTTGCTaGCTTGGTTCTTACACTGCA +
Preference number: 4 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGLGLCC*LGSYTA
Trigger: TGCAGTGTAAGAACCAAGCCAGCAACAGAGCCCAAG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp AAGTGCATACTTCCAAGCGATCCCCGGATTCTTGCCTaGTGTCAGAATTTCAAAGACCAGCGTCTCATTCGT +
Preference number: 4 (lower is better)
Translates to: KCILPSDPRILA*CQNFKDQRLIR
Trigger: ACGAATGAGACGCTGGTCTTTGAAATTCTGACACAAGGCAAGAATCCGGGGATCGCTTGGAAGTATGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
3UTR CAA 72 bp TTTCTGTGTGGGGAACAAGGCGTCCCATCTTTCACCTaGCCAGACATGGCAAAGAAAAACTCAAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FLCGEQGVPSFT*PDMAKKNSKFS
Trigger: GGAGAACTTTGAGTTTTTCTTTGCCATGTCTGGCAAGGTGAAAGATGGGACGCCTTGTTCCCCACACAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACGCTGCAGGACGACCATaGAAACACCCCATTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYAAGRP*KHPIVS
Trigger: GGAAACAATGGGGTGTTTTCATGGTCGTCCTGCAGC...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGATCATTTGCTTTGTGCTaGCTGAGGTACAGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGSFALC*LRYRPL
Trigger: TAAGGGCCTGTACCTCAGTCAGCACAAAGCAAATGA...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGACAAGCGGTCCCCTCTaGTGCAGGCATGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMTSGPL*CRHELG
Trigger: ACCAAGTTCATGCCTGCAGCAGAGGGGACCGCTTGT...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGCCTCTGCAGGAGGCTTaGGGGCATATTTCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMPLQEA*GHISCV
Trigger: GACGCAAGAAATATGCCCCCAAGCCTCCTGCAGAGG...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCACTACAGTGTCTCTCCTaGAACTTGACTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSLQCLS*NLTPPP
Trigger: CGGCGGAGGAGTCAAGTTCCAGGAGAGACACTGTAG...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTATACTCTGCACACTGTTaGGCACGGAAATCCAAGCTA +
Preference number: 4 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLYSAHC*ARKSKL
Trigger: TAGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTA...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTACGGTTAAAGGAACGCTaGTATTCAAACGTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLRLKER*YSNVVP
Trigger: AGGGACCACGTTTGAATACCAGCGTTCCTTTAACCG...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGTGTGGTGGTATCTCTTaGTGGCTGGCTGAGTTACAT +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVCGGIS*WLAELH
Trigger: ATGTAACTCAGCCAGCCACCAAGAGATACCACCACA...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp AGCACGGTACTTTTCCAATTGAGAGCAATTTTAAGCTaGTTAATGCCCATCAACAGCTGGCTCCCGACGATC +
Preference number: 4 (lower is better)
Translates to: STVLFQLRAILS*LMPINSWLPTI
Trigger: GATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAATTGGAAAAGTACCGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACCCTCTGCTGCAGGCATaGACTTGGTTTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYPLLQA*TWFHIC
Trigger: ACAGATGTGAAACCAAGTTCATGCCTGCAGCAGAGG...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGGCTTTGGCTCCAAATTaGCACTTACATTGCATGTCG +
Preference number: 4 (lower is better)
Translates to: RRRVAICPFFKPYGISSVALAPN*HLHCMS
Trigger: CGACATGCAATGTAAGTGGCAATTTGGAGCCAAAGC...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATTATCTTGGGCTCTGTTaGTGGCTTGGTTCTTACACT +
Preference number: 4 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYYLGLC*WLGSYT
Trigger: AGTGTAAGAACCAAGCCAGCAACAGAGCCCAAGATA...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTGGGGAGTGTCTCCGCTaGAGGGCTTTTACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSGECLR*RAFTKD
Trigger: GTCCTTTGTAAAAGCCCTGCAGCGGAGACACTCCCC...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCAAGGGGGAGTGTGACTTaGGGAGTGACCAGGATATGT +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSRGSVT*GVTRIC
Trigger: ACATATCCTGGTCACTCCCCAAGTCACACTCCCCCT...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR CCA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGATGCACAGCTTGGCTTTaGCTCCAAATTGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRCTAWL*LQIATY
Trigger: GTAAGTGGCAATTTGGAGCCAAAGCCAAGCTGTGCA...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCATGGCAACCAATAGGCTaGGCAGGAGAAAGCGTTGCA +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSWQPIG*AGESVA
Trigger: TGCAACGCTTTCTCCTGCCCAGCCTATTGGTTGCCA...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CTTTGTAGAGGTTCTTCTTCCAGCAGAATTAGGCTCACAACCACAATGTTTATGCCTCTGCAGGAGGCTTaGGGGCATATACATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCRGSSSSRIRLTTTMFMPLQEA*GHIHFL
Trigger: CAAGAAATGTATATGCCCCCAAGCCTCCTGCAGAGG...CATAAACATTGTGGTTGTGAGCCTAATTCTGCTGGAAGAAGAACCTCTACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
3UTR CAA 72 bp TTAAACCCTATGGGATTTCCTCTGTGGTTTGTAGTCTaGATACGAAGACCTAGAGATGGACGGGTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LNPMGFPLWFVV*IRRPRDGRVRS
Trigger: AGACCTTACCCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGGGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCGAGGTAGCGGTGAGATaGGGAATTCATTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESEVAVR*GIHCLG
Trigger: CCCGAGACAATGAATTCCTCATCTCACCGCTACCTC...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR TCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCAAAATGTCAAATCCTGTaGGGAGGATGGCGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSKCQIL*GGWRGR
Trigger: ACGACCACGCCATCCTCCTCACAGGATTTGACATTT...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCAGTGCGAGAACATTCTaGCCACTTCGACCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESSARTF*PLRPGR
Trigger: TCTGCCTGGTCGAAGTGGTCAGAATGTTCTCGCACT...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCACGTCGTCCACAAAAATaGCGCTTTTGCCACCTTCGA +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSRRPQK*RFCHLR
Trigger: TCGAAGGTGGCAAAAGCGGCATTTTTGTGGACGACG...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp GTACTTTTCCAATTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCGTCGTCCACAAAAATaGCGCTTTTGCCACCTTCGA +
Preference number: 4 (lower is better)
Translates to: VLFQLRAILSLLMPINSWRRPQK*RFCHLR
Trigger: TCGAAGGTGGCAAAAGCGGCATTTTTGTGGACGACG...CCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAATTGGAAAAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR GCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCACCAGACAGCCAGCCTaGGGTGTACTGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESTRQPA*GVLRNF
Trigger: GAAATTCCTCAGTACACCGCAGGCTGGCTGTCTGGT...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp AGGCCAAGCTGTTATTCTTCATTTCCATGGCATACAAGAGCTCATGGTTGCCACGGCCCTTATAAAACTTaGAAGTTGAGTTATCGCCTT +
Preference number: 4 (lower is better)
Translates to: RPSCYSSFPWHTRAHGCHGPYKT*KLSYRL
Trigger: AAGGCGATAACTCAACTTGCAAGTTTTATAAGGGCC...GTGGCAACCATGAGCTCTTGTATGCCATGGAAATGAAGAATAACAGCTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp GTACTTTTCCAATTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCATGACCTTGGGAAGTaGATACTTCCAAGCGATCCC +
Preference number: 4 (lower is better)
Translates to: VLFQLRAILSLLMPINSWHDLGK*ILPSDP
Trigger: GGGATCGCTTGGAAGTATGCACTTCCCAAGGTCATG...CCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAATTGGAAAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCAGAGCTGACTGCCACTaGCAGAAGCTGTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESRADCH*QKLFRD
Trigger: GTCTCTAAACAGCTTCTGTCAGTGGCAGTCAGCTCT...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTTGACTTGGGTGTGTTaGTCTCGTAAGCAAATGGCC +
Preference number: 4 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMLTWVC*SRKQMA
Trigger: GGCCATTTGCTTACGAGATCAACACACCCAAGTCAA...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCCGTGGTCGTGTCTCTTaGCATTCTTTCCCACAAGAG +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESRGRVS*HSFPQE
Trigger: CTCTTGTGGGAAAGAATGGCAAGAGACACGACCACG...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTCATGATGTTGCCTTCTaGTTTCCTGCAGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSHDVAF*FPAGIA
Trigger: GGCAATCCCTGCAGGAAAGCAGAAGGCAACATCATG...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACCATAAAATTTGTGGTTaGAGACTCCGTGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYHKICG*RLRAEG
Trigger: TCCCTCAGCACGGAGTCTGCAACCACAAATTTTATG...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCACAAGGGTCTCCACATTaGGACCATTTTGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSQGSPH*DHFVTF
Trigger: GAAAGTCACAAAATGGTCTCAATGTGGAGACCCTTG...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGAATAAAACTTGCAAGTTaGGTTATCGCCTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGIKLAS*VIAFAN
Trigger: GTTTGCAAAGGCGATAACTCAACTTGCAAGTTTTAT...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCAGCTGAGTTACATTCATaGCCTTGGGAAGTGCATACT +
Preference number: 4 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSAELHS*PWEVHT
Trigger: AGTATGCACTTCCCAAGGTCATGAATGTAACTCAGC...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTCTTTCCTGCAGGGATTaGCTTCACCATCATGAACCA +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSLSCRD*LHHHEP
Trigger: TGGTTCATGATGGTGAAGGCAATCCCTGCAGGAAAG...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTTTATACTGTCCCGTTTaGTTGGGCTCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSLYCPV*LGSSTR
Trigger: TCTGGTGGATGAGCCCAAGCAAACGGGACAGTATAA...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTCGAGTCCACTTCTACTaGCACGACAAAGACGTAATC +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSRVHFY*HDKDVI
Trigger: GATTACGTCTTTGTCGTGCCAGTAGAAGTGGACTCG...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR TCA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCTCTTACACTGCAGAATaGGGAATTGACTTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LNETLQTLLKIDVFAVESSYTAE*GIDLGV
Trigger: CACACCCAAGTCAATTCCTCATTCTGCAGTGTAAGA...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CCA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCTCACCTTGCCAGACATaGCAAAGAAAAACTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VFAVESFDVQEYICGNKTSPCQT*QRKTQS
Trigger: ACTTTGAGTTTTTCTTTGCCATGTCTGGCAAGGTGA...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR GCA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTGTTATTAGTTTCCCCTaGAAGGTCTTCTCAACGCAT +
Preference number: 4 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSVISFP*KVFSTH
Trigger: ATGCGTTGAGAAGACCTTGCAGGGGAAACTAATAAC...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
3UTR CAA 72 bp AAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTaGACTTATCTCAGTACAATCCATCTCTCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSTKFPLCQNEN*TYLSTIHLSSS
Trigger: AGAAGACGAGAGATGGATTGTACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS CCA 90 bp GCTGTACTCTGGCTCTTGGCTCTGGGAGGCAGGGGGAGTGTGACTTaGGGAGTGACCAGGATATGTCCGCTGGGAGCCAGGGTAGTCTTG +
Preference number: 5 (lower is better)
Translates to: AVLWLLALGGRGSVT*GVTRICPLGARVVL
Trigger: CAAGACTACCCTGGCTCCCAGCGGACATATCCTGGTCACTCCCCAAGTCACACTCCCCCTGCCTCCCAGAGCCAAGAGCCAGAGTACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS GCA 90 bp CTGGCACGACAAAGACGTAATCATCATTTAATCCGCTGCCACCGCTaGTGCCGCTGTCACTGGCTAAGGCGACGGCCACCGAAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LARQRRNHHLIRCHR*CRCHWLRRRPPKHS
Trigger: GCTGTGCTTCGGTGGCCGTCGCCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATGATTACGTCTTTGTCGTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 90 bp CCGCTGGGAGCCAGGGTAGTCTTGGTACCATCTGACCCTCTTCTCTaGTGTCCTTTTGTACAGGACGTGAGGATGGTGGCCTGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: PLGARVVLVPSDPLL*CPFVQDVRMVACRR
Trigger: TCGCCTGCAGGCCACCATCCTCACGTCCTGTACAAAAGGACAGCAGAGAAGAGGGTCAGATGGTACCAAGACTACCCTGGCTCCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS GCA 90 bp GCACGACAAAGACGTAATCATCATTTAATCCGCTGCCACCGCTGCTaGCGCTGTCACTGGCTAAGGCGACGGCCACCGAAGCACAGCAGA +
Preference number: 5 (lower is better)
Translates to: ARQRRNHHLIRCHRC*RCHWLRRRPPKHSR
Trigger: TCTGCTGTGCTTCGGTGGCCGTCGCCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATGATTACGTCTTTGTCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 90 bp TGCAGGGAGTTGCTGGCACCGTGTGCCGATCGCCTTTTCCTGTGGTaGAAAATGTCGTGTGAAATATATGACCCGCCCGAGTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: CRELLAPCADRLFLW*KMSCEIYDPPESTS
Trigger: AGAAGTGGACTCGGGCGGGTCATATATTTCACACGACATTTTGCACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS TCA 90 bp AGCTATAGTTGTGTTCCTGGGCCAGCAGCTGAGGTAGCGGTGAGATaGGGAATTCATTGTCTCGGGTCCTTATCAGACCTGACAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SYSCVPGPAAEVAVR*GIHCLGSLSDLTSR
Trigger: CCGGCTTGTCAGGTCTGATAAGGACCCGAGACAATGAATTCCTCATCTCACCGCTACCTCAGCTGCTGGCCCAGGAACACAACTATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS CCA 90 bp GTAGATCCTGTCCAAATGCTGAAACTCGGTAGTGCAGGGAGTTGCTaGCACCGTGTGCCGATCGCCTTTTCCTGTGGTGCAAAATGTCGT +
Preference number: 5 (lower is better)
Translates to: VDPVQMLKLGSAGSC*HRVPIAFSCGAKCR
Trigger: ACGACATTTTGCACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTCCCTGCACTACCGAGTTTCAGCATTTGGACAGGATCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGAGCTGTACTCTGGCTCTaGGCTCTGGGAGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRAVLWL*ALGGRG
Trigger: CCCCCTGCCTCCCAGAGCCAAGAGCCAGAGTACAGC...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS GCA 90 bp AATGTAGATCCTGTCCAAATGCTGAAACTCGGTAGTGCAGGGAGTTaGTGGCACCGTGTGCCGATCGCCTTTTCCTGTGGTGCAAAATGT +
Preference number: 5 (lower is better)
Translates to: NVDPVQMLKLGSAGS*WHRVPIAFSCGAKC
Trigger: ACATTTTGCACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTCCCTGCACTACCGAGTTTCAGCATTTGGACAGGATCTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTTGTCTCTCCTGGAACTaGACTCCTCCGCCGCAAGTG +
Preference number: 5 (lower is better)
Translates to: AILSLLMPINSWLPTIETCLSWN*TPPPQV
Trigger: CACTTGCGGCGGAGGAGTCAAGTTCCAGGAGAGACA...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCCATCCACGGAAGGGCTaGTTGTTATACTCTGCACAC +
Preference number: 5 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTHPRKG*LLYSAH
Trigger: GTGTGCAGAGTATAACAACAAGCCCTTCCGTGGATG...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTGCACACACCGTATCTaGCGGCTCTGCTGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMCTHRI*RLCWPP
Trigger: CGGCGGCCAGCAGAGCCGCAAGATACGGTGTGTGCA...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAGATGGAGCAGACAACTaGAGGAAGGCCGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLDGADN*RKAGLA
Trigger: AGCAAGGCCGGCCTTCCTCAAGTTGTCTGCTCCATC...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGAGGAGCTGGACAGAAGTaGGTGTTACAGGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGGAGQK*VLQALS
Trigger: GCTCAGAGCCTGTAACACCAACTTCTGTCCAGCTCC...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS TCA 90 bp CGAGTCTCTGAAGCACCGTCCTTTCCAAGTACTTGGACTCTAAAGTaGCTGCTCAAGATCGCCGAGGGCTTAAGCTCTAAATGTAGATCC +
Preference number: 5 (lower is better)
Translates to: RVSEAPSFPSTWTLK*LLKIAEGLSSKCRS
Trigger: GGATCTACATTTAGAGCTTAAGCCCTCGGCGATCTTGAGCAGTCACTTTAGAGTCCAAGTACTTGGAAAGGACGGTGCTTCAGAGACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GCTAGATCCTGGACAGTACTTGCCACCATACTGAGGCTTGGGGTTACTACAGTGGAGATGAGGAATTCATaGTCTCGGGTCCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: ARSWTVLATILRLGVTTVEMRNS*SRVLIR
Trigger: TCTGATAAGGACCCGAGACAATGAATTCCTCATCTC...CACTGTAGTAACCCCAAGCCTCAGTATGGTGGCAAGTACTGTCCAGGATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp ATTTCAAAGACCAGCGTCTCATTCGTGGGTCCTGGTGCATACAGTCGTTCAGGGGAGATGAGGAATTCATaGTCTCGGGTCCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: ISKTSVSFVGPGAYSRSGEMRNS*SRVLIR
Trigger: TCTGATAAGGACCCGAGACAATGAATTCCTCATCTC...CCCTGAACGACTGTATGCACCAGGACCCACGAATGAGACGCTGGTCTTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp GCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTTGCTTCTCCACCATCTaGGCATCTGCCACAACAAGG +
Preference number: 5 (lower is better)
Translates to: AILSLLMPINSWLPTIETCFSTI*ASATTR
Trigger: CCTTGTTGTGGCAGATGCCAAGATGGTGGAGAAGCA...AGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATTACTGTCCCGTTTGCTaGGGCTCATCCACCAGACAG +
Preference number: 5 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYYCPVC*GSSTRQ
Trigger: CTGTCTGGTGGATGAGCCCAAGCAAACGGGACAGTA...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GTTAGGCAGAATTCCATCCCTGTATGCGATGGCTCTGAGTCTCAGTCCTTGACCTGTGAGGTAATACTTTaGACTGAGGCTTCGAACAGC +
Preference number: 5 (lower is better)
Translates to: VRQNSIPVCDGSESQSLTCEVIL*TEASNS
Trigger: GCTGTTCGAAGCCTCAGTCAAAAGTATTACCTCACA...GGTCAAGGACTGAGACTCAGAGCCATCGCATACAGGGATGGAATTCTGCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TCGCTTCTCATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTACACTGGGCAAGTCCTTaGGTTGCAGGCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SLLIVKCFRVPCVSRGQLHWASP*VAGFFQ
Trigger: CTGGAAGAAGCCTGCAACCAAAGGACTTGCCCAGTG...TAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAATGAGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TATAAATGGTGGGCTTGTCCCTCCTTCAAGCATGCTATTTCACCAGTGAGCACCACAAAAATGCCGCTTTaGCCACCTTCGATGGCTGTA +
Preference number: 5 (lower is better)
Translates to: YKWWACPSFKHAISPVSTTKMPL*PPSMAV
Trigger: TACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTGT...GGTGCTCACTGGTGAAATAGCATGCTTGAAGGAGGGACAAGCCCACCATTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGGCGTGGTCGTGTCTCTaGCCATTCTTTCCCACAAGA +
Preference number: 5 (lower is better)
Translates to: RRRVAICPFFKPYGISSVAWSCL*PFFPTR
Trigger: TCTTGTGGGAAAGAATGGCAAGAGACACGACCACGC...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGAATACTCTGCACACTGTaGGGCACGGAAATCCAAGCT +
Preference number: 5 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGILCTL*GTEIQA
Trigger: AGCTTGGATTTCCGTGCCCAACAGTGTGCAGAGTAT...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TCCAGGGGTCAACTAAGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGCAGGAGAAAGCGTaGCATATCTTGGGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SRGQLRRRVAICPFFKPYGQEKA*HILGSV
Trigger: AACAGAGCCCAAGATATGCAACGCTTTCTCCTGCCC...ATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCTTAGTTGACCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TTCCTTGTTGACCAAGTCCTGGGGCAAATTGAAACTTGTCAGTTGGAAGGAGGAACAAAAATGCCGCTTTaGCCACCTTCGATGGCTGTA +
Preference number: 5 (lower is better)
Translates to: FLVDQVLGQIETCQLEGGTKMPL*PPSMAV
Trigger: TACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTGT...TCCTCCTTCCAACTGACAAGTTTCAATTTGCCCCAGGACTTGGTCAACAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGCCAATGGTCCCATCTTaGAACAGGCTAGAAACCATG +
Preference number: 5 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRPMVPS*NRLETM
Trigger: CATGGTTTCTAGCCTGTTCAAAGATGGGACCATTGG...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TTAAGCTTGTTAATGCCCATCAACAGCTGGCTCCCGACGATCGAAACTCTCATCGTTGAGTTATCGCCTTaGCAAACACCACATGCATCA +
Preference number: 5 (lower is better)
Translates to: LSLLMPINSWLPTIETLIVELSP*QTPHAS
Trigger: TGATGCATGTGGTGTTTGCAAAGGCGATAACTCAAC...GATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCATTAACAAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCATGGCTGTTGCAGACTaGAACCTGAGTGGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: VFAVESFDVQEYICGNKTMAVAD*NLSGRA
Trigger: AGCACGCCCACTCAGGTTCAAGTCTGCAACAGCCAT...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp TGTTGGGCACGGAAATCCAAGCTATTCTCAGGACAAGGGTTAATGTTGCACAGCGGGCATATACATTTCTaGCGTCGTCCACAAAAATGC +
Preference number: 5 (lower is better)
Translates to: CWARKSKLFSGQGLMLHSGHIHF*RRPQKC
Trigger: GCATTTTTGTGGACGACGCAAGAAATGTATATGCCC...GCTGTGCAACATTAACCCTTGTCCTGAGAATAGCTTGGATTTCCGTGCCCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp ATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACGGGTCCTTTCCAAGTACTaGGACTCTAAAGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: MGFPLWFVVLIRRPRDGRVLSKY*DSKVTA
Trigger: AGCAGTCACTTTAGAGTCCAAGTACTTGGAAAGGAC...CCGTCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGAACAAAAATGCCGCTTTaGCCACCTTCGATGGCTGTA +
Preference number: 5 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGTKMPL*PPSMAV
Trigger: TACAGCCATCGAAGGTGGCAAAAGCGGCATTTTTGT...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACGTGGGTGACATGATGTaGCCTTCTGCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYVGDMM*PSAFLQ
Trigger: CTGCAGGAAAGCAGAAGGCAACATCATGTCACCCAC...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp AGAAGGAGAGTGGCTATCTGTCCATTCTTTAAACCCTATGGGATTTCCTCTGTGGGCTTTGGCTCCAAATaGCCACTTACATTGCATGTC +
Preference number: 5 (lower is better)
Translates to: RRRVAICPFFKPYGISSVGFGSK*PLTLHV
Trigger: GACATGCAATGTAAGTGGCAATTTGGAGCCAAAGCC...CACAGAGGAAATCCCATAGGGTTTAAAGAATGGACAGATAGCCACTCTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGCCAAGGCTGCACAGCTaGGCTTTGGCTCCAAATTGC +
Preference number: 5 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMPRLHS*ALAPNC
Trigger: GCAATTTGGAGCCAAAGCCAAGCTGTGCAGCCTTGG...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CCTATGGGATTTCCTCTGTGGTTTGTAGTCTTGATACGAAGACCTAGAGATGGACCCCGGATTCTTGCCTaGTGTCAGAATTTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: PMGFPLWFVVLIRRPRDGPRILA*CQNFKD
Trigger: GTCTTTGAAATTCTGACACAAGGCAAGAATCCGGGG...TCCATCTCTAGGTCTTCGTATCAAGACTACAAACCACAGAGGAAATCCCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGAAAAGCGTTGCATATCTaGGGCTCTGTTGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRKALHI*GSVAGL
Trigger: CAAGCCAGCAACAGAGCCCAAGATATGCAACGCTTT...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTTGGCACCAGAGTGACTaGCAAATGTCCTTCATAACC +
Preference number: 5 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSWHQSD*QMSFIT
Trigger: GGTTATGAAGGACATTTGCAAGTCACTCTGGTGCCA...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GTACTTTTCCAATTGAGAGCAATTTTAAGCTTGTTAATGCCCATCAACAGCTGGCTTTACACACTGGCCTaGCCGACACCACATACTCAA +
Preference number: 5 (lower is better)
Translates to: VLFQLRAILSLLMPINSWLYTLA*PTPHTQ
Trigger: TTGAGTATGTGGTGTCGGCAAGGCCAGTGTGTAAAG...CCAGCTGTTGATGGGCATTAACAAGCTTAAAATTGCTCTCAATTGGAAAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTGAAAGACCAATCTAAGAAGGCCAAGCTGTTATTCTTCATTTCCATGGCATACGTCCCATCTTTCACCTaGCCAGACATGGCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: LKDQSKKAKLLFFISMAYVPSFT*PDMAKK
Trigger: TTTCTTTGCCATGTCTGGCAAGGTGAAAGATGGGAC...GTATGCCATGGAAATGAAGAATAACAGCTTGGCCTTCTTAGATTGGTCTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp ATTGTCAAGTGCTTTAGAGTACCATGTGTTTCCAGGGGTCAACTAAGAAGGAGAGGGCATATACATTTCTaGCGTCGTCCACAAAAATGC +
Preference number: 5 (lower is better)
Translates to: IVKCFRVPCVSRGQLRRRGHIHF*RRPQKC
Trigger: GCATTTTTGTGGACGACGCAAGAAATGTATATGCCC...TCTCCTTCTTAGTTGACCCCTGGAAACACATGGTACTCTAAAGCACTTGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212665.2
CDS-3UTR CAA 90 bp CAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGTCATTGGGGGCATATTTCTaGCGTCGTCCACAAAAATGC +
Preference number: 5 (lower is better)
Translates to: QACYFTSEHLFLPKVNMSLGAYF*RRPQKC
Trigger: GCATTTTTGTGGACGACGCAAGAAATATGCCCCCAA...TGACATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCCCACGGAAGGGCTTGTaGTTATACTCTGCACACTGT +
Preference number: 5 (lower is better)
Translates to: LNETLQTLLKIDVFAVESPRKGL*LYSAHC
Trigger: ACAGTGTGCAGAGTATAACAACAAGCCCTTCCGTGG...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GATCGAAACTCTCATCTGAGACGTGGTGAAATGCTGTTACTCATGGAAAGATCTGTTACATTCATGACCTaGGGAAGTGCATACTTCCAA +
Preference number: 5 (lower is better)
Translates to: DRNSHLRRGEMLLLMERSVTFMT*GSAYFQ
Trigger: TTGGAAGTATGCACTTCCCAAGGTCATGAATGTAAC...AGATCTTTCCATGAGTAACAGCATTTCACCACGTCTCAGATGAGAGTTTCGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTGAATGAGACCTTACAGACTCTGTTAAAAATAGATGTCTTTGCTGTTGAATCCGGCTCTGTTGCTGGCTaGGTTCTTACACTGCAGAAT +
Preference number: 5 (lower is better)
Translates to: LNETLQTLLKIDVFAVESGSVAG*VLTLQN
Trigger: ATTCTGCAGTGTAAGAACCAAGCCAGCAACAGAGCC...GGATTCAACAGCAAAGACATCTATTTTTAACAGAGTCTGTAAGGTCTCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp GTCTTTGCTGTTGAATCCTTTGATGTTCAAGAGTACATATGTGGGAACAAGACCACAAGGGTCTCCACATaGAGACCATTTTGTGACTTT +
Preference number: 5 (lower is better)
Translates to: VFAVESFDVQEYICGNKTTRVST*RPFCDF
Trigger: AAAGTCACAAAATGGTCTCAATGTGGAGACCCTTGT...GGTCTTGTTCCCACATATGTACTCTTGAACATCAAAGGATTCAACAGCAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTCATGAAAACACCCCATaGTTTCCAGTCAGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSHENTP*FPVSVG
Trigger: ACCCACACTGACTGGAAACAATGGGGTGTTTTCATG...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CTTCAAGCATGCTATTTCACCAGTGAGCACCTATTTTTACCAAAAGTGAACATGATCTGTCCCGGGAGTTaGTCCGGATATTTATACTGT +
Preference number: 5 (lower is better)
Translates to: LQACYFTSEHLFLPKVNMICPGS*SGYLYC
Trigger: ACAGTATAAATATCCGGACAAACTCCCGGGACAGAT...CATGTTCACTTTTGGTAAAAATAGGTGCTCACTGGTGAAATAGCATGCTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS-3UTR CAA 90 bp CCAAAGTCAACGAAGTTCCCACTTTGTCAAAATGAAAACTTGACTTATCTCAGTGAGATGAGGAATTCATaGTCTCGGGTCCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: PKSTKFPLCQNENLTYLSEMRNS*SRVLIR
Trigger: TCTGATAAGGACCCGAGACAATGAATTCCTCATCTC...ACTGAGATAAGTCAAGTTTTCATTTTGACAAAGTGGGAACTTCGTTGACTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212665.2
CDS CCA 72 bp TGGCTCTTGGCTCTGGGAGGCAGGGGGAGTGTGACTTaGGGAGTGACCAGGATATGTCCGCTGGGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: WLLALGGRGSVT*GVTRICPLGAR
Trigger: CCTGGCTCCCAGCGGACATATCCTGGTCACTCCCCAAGTCACACTCCCCCTGCCTCCCAGAGCCAAGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS GCA 72 bp AGACGTAATCATCATTTAATCCGCTGCCACCGCTGCTaGCGCTGTCACTGGCTAAGGCGACGGCCACCGAAG +
Preference number: 6 (lower is better)
Translates to: RRNHHLIRCHRC*RCHWLRRRPPK
Trigger: CTTCGGTGGCCGTCGCCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATGATTACGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 72 bp CAAAGACGTAATCATCATTTAATCCGCTGCCACCGCTaGTGCCGCTGTCACTGGCTAAGGCGACGGCCACCG +
Preference number: 6 (lower is better)
Translates to: QRRNHHLIRCHR*CRCHWLRRRPP
Trigger: CGGTGGCCGTCGCCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATGATTACGTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 72 bp CCTGTCCAAATGCTGAAACTCGGTAGTGCAGGGAGTTaGTGGCACCGTGTGCCGATCGCCTTTTCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: PVQMLKLGSAGS*WHRVPIAFSCG
Trigger: ACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTCCCTGCACTACCGAGTTTCAGCATTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 72 bp TGCTGTCCTTTTGTACAGGACGTGAGGATGGTGGCCTaGAGGCGAGCTATAGTTGTGTTCCTGGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: CCPFVQDVRMVA*RRAIVVFLGQQ
Trigger: CTGCTGGCCCAGGAACACAACTATAGCTCGCCTGCAGGCCACCATCCTCACGTCCTGTACAAAAGGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS CCA 72 bp GTCCAAATGCTGAAACTCGGTAGTGCAGGGAGTTGCTaGCACCGTGTGCCGATCGCCTTTTCCTGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: VQMLKLGSAGSC*HRVPIAFSCGA
Trigger: TGCACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTCCCTGCACTACCGAGTTTCAGCATTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 72 bp CTGGCACGACAAAGACGTAATCATCATTTAATCCGCTaGCACCGCTGCTGCCGCTGTCACTGGCTAAGGCGA +
Preference number: 6 (lower is better)
Translates to: LARQRRNHHLIR*HRCCRCHWLRR
Trigger: TCGCCTTAGCCAGTGACAGCGGCAGCAGCGGTGGCAGCGGATTAAATGATGATTACGTCTTTGTCGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS GCA 72 bp GCCAGGGTAGTCTTGGTACCATCTGACCCTCTTCTCTaGTGTCCTTTTGTACAGGACGTGAGGATGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ARVVLVPSDPLL*CPFVQDVRMVA
Trigger: GGCCACCATCCTCACGTCCTGTACAAAAGGACAGCAGAGAAGAGGGTCAGATGGTACCAAGACTACCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS GCA 72 bp TTTGTGACTTTCCAGCTGACCGTCTGGGCCGCCCTGTaGCTCCATATTCGTCAAAGCGTAGATAGGCGTCCT +
Preference number: 6 (lower is better)
Translates to: FVTFQLTVWAAL*LHIRQSVDRRP
Trigger: AGGACGCCTATCTACGCTTTGACGAATATGGAGGCACAGGGCGGCCCAGACGGTCAGCTGGAAAGTCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS CAA 90 bp ACTTGGGGAGTGACCAGGATATGTCCGCTGGGAGCCAGGGTAGTCTaGGTACCATCTGACCCTCTTCTCTGCTGTCCTTTTGTACAGGAC +
Preference number: 6 (lower is better)
Translates to: TWGVTRICPLGARVV*VPSDPLLCCPFVQD
Trigger: GTCCTGTACAAAAGGACAGCAGAGAAGAGGGTCAGATGGTACCAAGACTACCCTGGCTCCCAGCGGACATATCCTGGTCACTCCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS TCA 72 bp TGTGTTCCTGGGCCAGCAGCTGAGGTAGCGGTGAGATaGGGAATTCATTGTCTCGGGTCCTTATCAGACCTG +
Preference number: 6 (lower is better)
Translates to: CVPGPAAEVAVR*GIHCLGSLSDL
Trigger: CAGGTCTGATAAGGACCCGAGACAATGAATTCCTCATCTCACCGCTACCTCAGCTGCTGGCCCAGGAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS CCA 72 bp GAGTTGCTGGCACCGTGTGCCGATCGCCTTTTCCTGTaGTGCAAAATGTCGTGTGAAATATATGACCCGCCC +
Preference number: 6 (lower is better)
Translates to: ELLAPCADRLFL*CKMSCEIYDPP
Trigger: GGGCGGGTCATATATTTCACACGACATTTTGCACCACAGGAAAAGGCGATCGGCACACGGTGCCAGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS CCA 72 bp CGTCAAAGCGTAGATAGGCGTCCTCTGCAGGAGGCTTaGGGGCATATTTCTTGCGTCGTCCACAAAAATGCC +
Preference number: 6 (lower is better)
Translates to: RQSVDRRPLQEA*GHISCVVHKNA
Trigger: GGCATTTTTGTGGACGACGCAAGAAATATGCCCCCAAGCCTCCTGCAGAGGACGCCTATCTACGCTTTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5
CDS CAA 72 bp GTGACCAGGATATGTCCGCTGGGAGCCAGGGTAGTCTaGGTACCATCTGACCCTCTTCTCTGCTGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: VTRICPLGARVV*VPSDPLLCCPF
Trigger: AAAAGGACAGCAGAGAAGAGGGTCAGATGGTACCAAGACTACCCTGGCTCCCAGCGGACATATCCTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
ENSMUST00000212665.2
CDS TCA 72 bp GCCACAGAGGACGAGCTGTCATTTCTGATAAATCCCTaGTACAAACACTGCGGTACCTCAGGCTCCCGAGTC +
Preference number: 6 (lower is better)
Translates to: ATEDELSFLINP*YKHCGTSGSRV
Trigger: GACTCGGGAGCCTGAGGTACCGCAGTGTTTGTATCAGGGATTTATCAGAAATGACAGCTCGTCCTCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093113.5
ENSMUST00000212437.2
CDS TCA 72 bp GAAGCACCGTCCTTTCCAAGTACTTGGACTCTAAAGTaGCTGCTCAAGATCGCCGAGGGCTTAAGCTCTAAA +
Preference number: 6 (lower is better)
Translates to: EAPSFPSTWTLK*LLKIAEGLSSK
Trigger: TTTAGAGCTTAAGCCCTCGGCGATCTTGAGCAGTCACTTTAGAGTCCAAGTACTTGGAAAGGACGGTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093113.5