RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033453

Ensembl transcript IDs: ENSMUST00000065112.7

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCAGAGCTCCCAGGATCACCTGAGGGTGCCAAGCTGCAGGCCATaGCTCTTCCAGCAGCCTGTGACCTCCATTATGGGGGCCAAGGTC +
Preference number: 1 (lower is better)
Translates to: AQSSQDHLRVPSCRP*LFQQPVTSIMGAKV
Trigger: GACCTTGGCCCCCATAATGGAGGTCACAGGCTGCTGGAAGAGCCATGGCCTGCAGCTTGGCACCCTCAGGTGATCCTGGGAGCTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp CTGCCCACCTGCCTGTACCTCGACCCTTTCCACTCAGCCCAGCAGTaGCTCTCTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCAT +
Preference number: 1 (lower is better)
Translates to: LPTCLYLDPFHSAQQ*LSSQGQNAPSTGHH
Trigger: ATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAGAGAGGCACTGCTGGGCTGAGTGGAAAGGGTCGAGGTACAGGCAGGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 90 bp CCTTGGAAGCTGGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTTaGAGCGTCTCCCCACAACTGGCCCGAGAAGCAGGGCATGAGGTA +
Preference number: 1 (lower is better)
Translates to: PWKLAFSTFCPAPFC*SVSPQLAREAGHEV
Trigger: TACCTCATGCCCTGCTTCTCGGGCCAGTTGTGGGGAGACGCTTCAACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAGCTTCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 90 bp GTAGCATGCCCACAGGAGACAGCAGGAGCTGCCAGAGTAGAAGGCTaGCTTGCCAGCATGTGGGTTCTCAGCACCTCACCCTCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: VACPQETAGAARVEG*LASMWVLSTSPSQA
Trigger: TGCCTGGGAGGGTGAGGTGCTGAGAACCCACATGCTGGCAAGTCAGCCTTCTACTCTGGCAGCTCCTGCTGTCTCCTGTGGGCATGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp GGTTCTCAGCACCTCACCCTCCCAGGCACAACCACTTCCCCTCAGTaGGTACAGGGCTATGGTCACTTTGGAAGGTCCCTAGGGCAGTGC +
Preference number: 1 (lower is better)
Translates to: GSQHLTLPGTTTSPQ*VQGYGHFGRSLGQC
Trigger: GCACTGCCCTAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTGAGGGGAAGTGGTTGTGCCTGGGAGGGTGAGGTGCTGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp CTGTTAGAGGCCAGTCACCTTAGTGAGAGCACCTCACTGCCCACCTaGCTGTACCTCGACCCTTTCCACTCAGCCCAGCAGTGCCTCTCT +
Preference number: 1 (lower is better)
Translates to: LLEASHLSESTSLPT*LYLDPFHSAQQCLS
Trigger: AGAGAGGCACTGCTGGGCTGAGTGGAAAGGGTCGAGGTACAGGCAGGTGGGCAGTGAGGTGCTCTCACTAAGGTGACTGGCCTCTAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp CCCTTTCCACTCAGCCCAGCAGTGCCTCTCTTCACAGGGACAGAATaGCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTC +
Preference number: 1 (lower is better)
Translates to: PFPLSPAVPLFTGTE*PKHRAPCSHQQARL
Trigger: GAGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAGAGAGGCACTGCTGGGCTGAGTGGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 90 bp AAGGAACCTCTAACCCAGACCCATGGTCCTTGTTCTGGATGTGAGTaGCACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCCAGCT +
Preference number: 1 (lower is better)
Translates to: KEPLTQTHGPCSGCE*HCDTDHWPLSSAPA
Trigger: AGCTGGAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAACAAGGACCATGGGTCTGGGTTAGAGGTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 90 bp GCTCTTCCAGCAGCCTGTGACCTCCATTATGGGGGCCAAGGTCCCTaGAGTTCTACACTGGAGGCATCCAACTTCCAGGTTCCTTGGAAG +
Preference number: 1 (lower is better)
Translates to: ALPAACDLHYGGQGP*SSTLEASNFQVPWK
Trigger: CTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTGTAGAACTTCAGGGACCTTGGCCCCCATAATGGAGGTCACAGGCTGCTGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp CCTGTGACCTCCATTATGGGGGCCAAGGTCCCTGAAGTTCTACACTaGAGGCATCCAACTTCCAGGTTCCTTGGAAGCTGGCCTTCAGCA +
Preference number: 1 (lower is better)
Translates to: PVTSIMGAKVPEVLH*RHPTSRFLGSWPSA
Trigger: TGCTGAAGGCCAGCTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTGTAGAACTTCAGGGACCTTGGCCCCCATAATGGAGGTCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp CACCCTCCCAGGCACAACCACTTCCCCTCAGTGGGTACAGGGCTATaGTCACTTTGGAAGGTCCCTAGGGCAGTGCATGATCTTCATCAT +
Preference number: 1 (lower is better)
Translates to: HPPRHNHFPSVGTGL*SLWKVPRAVHDLHH
Trigger: ATGATGAAGATCATGCACTGCCCTAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTGAGGGGAAGTGGTTGTGCCTGGGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp GAAGTTCTACACTGGAGGCATCCAACTTCCAGGTTCCTTGGAAGCTaGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTTGAAGCGTCT +
Preference number: 1 (lower is better)
Translates to: EVLHWRHPTSRFLGS*PSAPSAQHPSVEAS
Trigger: AGACGCTTCAACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAGCTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTGTAGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp GCTCTAGCAACAGTATCTAGAGTCTCCAGGAGCCGACTTCCACGCTaGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGA +
Preference number: 1 (lower is better)
Translates to: ALATVSRVSRSRLPR*APSSLLPNMMSSIR
Trigger: TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAGTCGGCTCCTGGAGACTCTAGATACTGTTGCTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp CAGTGGGTACAGGGCTATGGTCACTTTGGAAGGTCCCTAGGGCAGTaGATGATCTTCATCATCAGCCTCTCTTACATGTTCCTTTCTAGA +
Preference number: 1 (lower is better)
Translates to: QWVQGYGHFGRSLGQ*MIFIISLSYMFLSR
Trigger: TCTAGAAAGGAACATGTAAGAGAGGCTGATGATGAAGATCATGCACTGCCCTAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp TTTATGGTTGGGGGTCACCACAACATGAGGAACCATATTATAGGTTaGAGCATTAGGAGGCTGAGAACCACTGCTCTAGGGGCTAAGCTG +
Preference number: 1 (lower is better)
Translates to: FMVGGHHNMRNHIIG*SIRRLRTTALGAKL
Trigger: CAGCTTAGCCCCTAGAGCAGTGGTTCTCAGCCTCCTAATGCTGCAACCTATAATATGGTTCCTCATGTTGTGGTGACCCCCAACCATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp AACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATaGAAGATGAGCAAACAGGGAAGTTGCACCCAAATGAACCCAATC +
Preference number: 1 (lower is better)
Translates to: NHPGCKMLVFQGGPR*KMSKQGSCTQMNPI
Trigger: GATTGGGTTCATTTGGGTGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 90 bp TCATTAGAAACCTGTGCCTCCACCTCACCTCTGCTCAGCACGGGTTaGCAGAAAATGTTCAAAAGCAAGACAAACTTCCCAAGTTGTCTT +
Preference number: 1 (lower is better)
Translates to: SLETCASTSPLLSTG*QKMFKSKTNFPSCL
Trigger: AAGACAACTTGGGAAGTTTGTCTTGCTTTTGAACATTTTCTGTCAACCCGTGCTGAGCAGAGGTGAGGTGGAGGCACAGGTTTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp GTCTTTCAAGGAGGACCAAGATGGAAGATGAGCAAACAGGGAAGTTaGACCCAAATGAACCCAATCTCATTGTCCCTTTGGCTTCTAGTA +
Preference number: 1 (lower is better)
Translates to: VFQGGPRWKMSKQGS*TQMNPISLSLWLLV
Trigger: TACTAGAAGCCAAAGGGACAATGAGATTGGGTTCATTTGGGTGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTCCTCCTTGAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp ACAGGAAAAAGAGTGTGGATACCTGGCATGAGTCAGGAACAAGAGTaGCCATCCCTCCTTGAAATGACTTGTAAAACAGCTGACAGCAAT +
Preference number: 1 (lower is better)
Translates to: TGKRVWIPGMSQEQE*PSLLEMTCKTADSN
Trigger: ATTGCTGTCAGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACACTCTTTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 90 bp TTTTGTGTTCTCTGCTTCAGCCACCAAATCATCTCCCCTTTGACGTaGCAAGCATCTGTTCGTCATATTTGCTCTCTCTTGATCAACAAG +
Preference number: 1 (lower is better)
Translates to: FCVLCFSHQIISPLT*QASVRHICSLLINK
Trigger: CTTGTTGATCAAGAGAGAGCAAATATGACGAACAGATGCTTGCCACGTCAAAGGGGAGATGATTTGGTGGCTGAAGCAGAGAACACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 90 bp GATGTCCTATATACATTGGAGCTTCCAAGTCTTCAAGAATTACCCTaGTATAAGAAACACCTGGATTTCTTTTTGACTGCCATGTCTACA +
Preference number: 1 (lower is better)
Translates to: DVLYTLELPSLQELP*YKKHLDFFLTAMST
Trigger: TGTAGACATGGCAGTCAAAAAGAAATCCAGGTGTTTCTTATAGCAGGGTAATTCTTGAAGACTTGGAAGCTCCAATGTATATAGGACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGAGTCCTCTGCTCCAGCTaGCCACGGCACCAGCACAAC +
Preference number: 2 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRVLCSS*PRHQHN
Trigger: GTTGTGCTGGTGCCGTGGTCAGCTGGAGCAGAGGAC...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGGCTCCCAGGATCACCTaGGGGTGCCAAGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMAPRIT*GCQAAG
Trigger: GCCTGCAGCTTGGCACCCTCAGGTGATCCTGGGAGC...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp AGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTTCTTCCAGCAGCCTGTaGCCTCCATTATGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: RDRMPQAQGTMFSSASKASSSSL*PPLWGP
Trigger: TGGCCCCCATAATGGAGGTCACAGGCTGCTGGAAGA...AGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 90 bp AGGTCCCTGAAGTTCTACACTGGAGGCATCCAACTTCCAGGTTCCTaGGAAGCTGGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTTG +
Preference number: 2 (lower is better)
Translates to: RSLKFYTGGIQLPGS*EAGLQHLLPSTLLL
Trigger: CAACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAGCTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTGTAGAACTTCAGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGGAAGTTGCACCCAAATaGACCCAATCTCATTGTCCC +
Preference number: 2 (lower is better)
Translates to: QGTMFSSASKAPLQPQALEVAPK*TQSHCP
Trigger: GGGACAATGAGATTGGGTTCATTTGGGTGCAACTTC...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp AGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCCTCCTCCACAGTaGAGACAAGGGTTTTGGTCT +
Preference number: 2 (lower is better)
Translates to: RDRMPQAQGTMFSSASKAPPPPQ*RQGFWS
Trigger: AGACCAAAACCCTTGTCTTCACTGTGGAGGAGGGGG...AGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR GCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGAGACATAATGTAGCATaGCCACAGGAGACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: QGTMFSSASKAPLQPQALRHNVA*PQETAG
Trigger: TCCTGCTGTCTCCTGTGGGCATGCTACATTATGTCT...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR GCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATGGAGACAGCAGGAGCTaGCAGAGTAGAAGGCTGACT +
Preference number: 2 (lower is better)
Translates to: HILLRRVRAPGYFCPREHGDSRS*QSRRLT
Trigger: AGTCAGCCTTCTACTCTGGCAGCTCCTGCTGTCTCC...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGAGGTTCCTTGGAAGCTaGCCTTCAGCACCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMRFLGS*PSAPSA
Trigger: GGCAGAAGGTGCTGAAGGCCAGCTTCCAAGGAACCT...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCGACCAAGATGGAAGATaGGCAAACAGGGAAGTTGCA +
Preference number: 2 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASDQDGR*ANREVA
Trigger: TGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTC...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCCCATGTCTACAAGAATaGCAGATGGGTCTCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASPCLQE*QMGLQC
Trigger: ACACTGGAGACCCATCTGTCATTCTTGTAGACATGG...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR GCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATAGGTCCCTAGGGCAGTaGATGATCTTCATCATCAGC +
Preference number: 2 (lower is better)
Translates to: HILLRRVRAPGYFCPREHRSLGQ*MIFIIS
Trigger: GCTGATGATGAAGATCATGCACTGCCCTAGGGACCT...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGATACAAGAATGACAGATaGGTCTCCAGTGTCCCAAGG +
Preference number: 2 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRYKNDR*VSSVPR
Trigger: CCTTGGGACACTGGAGACCCATCTGTCATTCTTGTA...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp GACTCTGTCTTTGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGGGATCAGGAAACTTCCAGGTTCCTTaGAAGCTGGCCTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: DSVFVFRAPADSQAMGSGNFQVP*KLAFST
Trigger: GGTGCTGAAGGCCAGCTTCCAAGGAACCTGGAAGTT...TCCTGATCCCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTAACTTATTTCCGTGGCTaGGCACATCCTGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLTYFRG*AHPAET
Trigger: CGTCTCAGCAGGATGTGCTCAGCCACGGAAATAAGT...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACAACAGGAAAAAGAGTGTaGATACCTGGCATGAGTCAG +
Preference number: 2 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTTGKRV*IPGMSQ
Trigger: CTGACTCATGCCAGGTATCCACACTCTTTTTCCTGT...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp TCGCTATCCCAGGATGACATTCTTCCAGGCCAGACCCCACAGCTCCATACCTACGCTTCTAGTAACCCCTaGACAGTTTTACTCTTAGAT +
Preference number: 2 (lower is better)
Translates to: SLSQDDILPGQTPQLHTYASSNP*TVLLLD
Trigger: ATCTAAGAGTAAAACTGTTCAGGGGTTACTAGAAGC...GTAGGTATGGAGCTGTGGGGTCTGGCCTGGAAGAATGTCATCCTGGGATAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATATATTTGCTCTCTCTTaGTCAACAAGTGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: HILLRRVRAPGYFCPREHIFALS*STSGPC
Trigger: ACAGGGACCACTTGTTGATCAAGAGAGAGCAAATAT...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTACAAGGCTTCCCCAGCTaGTCTAATGCCTTAACCATC +
Preference number: 2 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLQGFPS*SNALTI
Trigger: GATGGTTAAGGCATTAGACCAGCTGGGGAAGCCTTG...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR GCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTAATCATTAGAAACCTGTaGCTCCACCTCACCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLIIRNL*LHLTSA
Trigger: AGCAGAGGTGAGGTGGAGGCACAGGTTTCTAATGAT...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTACAAGGAGGACCAAGATaGAAGATGAGCAAACAGGGA +
Preference number: 2 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLQGGPR*KMSKQG
Trigger: TCCCTGTTTGCTCATCTTCCATCTTGGTCCTCCTTG...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 90 bp GGTCTTTCAAGGAGGACCAAGATGGAAGATGAGCAAACAGGGAAGTaGCACCCAAATGAACCCAATCTCATTGTCCCTTTGGCTTCTAGT +
Preference number: 2 (lower is better)
Translates to: GLSRRTKMEDEQTGK*HPNEPNLIVPLASS
Trigger: ACTAGAAGCCAAAGGGACAATGAGATTGGGTTCATTTGGGTGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTCCTCCTTGAAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR GCA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACAGGATTTCTTTTTGACTaGCATGTCTACAAGAATGAC +
Preference number: 2 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTGFLFD*HVYKND
Trigger: GTCATTCTTGTAGACATGGCAGTCAAAAAGAAATCC...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 90 bp ATCATTAGAAACCTGTGCCTCCACCTCACCTCTGCTCAGCACGGGTaGACAGAAAATGTTCAAAAGCAAGACAAACTTCCCAAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: IIRNLCLHLTSAQHG*TENVQKQDKLPKLS
Trigger: AGACAACTTGGGAAGTTTGTCTTGCTTTTGAACATTTTCTGTCAACCCGTGCTGAGCAGAGGTGAGGTGGAGGCACAGGTTTCTAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR TCA 90 bp CAGGAACAAGAGTGGCCATCCCTCCTTGAAATGACTTGTAAAACAGCTGACAGCACCTGGATTTCTTTTTaGCTGCCATGTCTACAAGAA +
Preference number: 2 (lower is better)
Translates to: QEQEWPSLLEMTCKTADSTWISF*LPCLQE
Trigger: TTCTTGTAGACATGGCAGTCAAAAAGAAATCCAGGT...GCTGTCAGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 90 bp AGGTCCTGGATGTACTGCCGAGTCTTTGGAGATGTCCTATATACATaGGAGCTTCCAAGTCTTCAAGAATTACCCTGCTATAAGAAACAC +
Preference number: 2 (lower is better)
Translates to: RSWMYCRVFGDVLYT*ELPSLQELPCYKKH
Trigger: GTGTTTCTTATAGCAGGGTAATTCTTGAAGACTTGGAAGCTCCAATGTATATAGGACATCTCCAAAGACTCGGCAGTACATCCAGGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 90 bp AGTCTTCAAGAATTACCCTGCTATAAGAAACACCTGGATTTCTTTTaGACTGCCATGTCTACAAGAATGACAGATGGGTCTCCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: SLQELPCYKKHLDFF*TAMSTRMTDGSPVS
Trigger: GGACACTGGAGACCCATCTGTCATTCTTGTAGACATGGCAGTCAAAAAGAAATCCAGGTGTTTCTTATAGCAGGGTAATTCTTGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 72 bp CTGGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTTaGAGCGTCTCCCCACAACTGGCCCGAGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: LAFSTFCPAPFC*SVSPQLAREAG
Trigger: CCCTGCTTCTCGGGCCAGTTGTGGGGAGACGCTTCAACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp GCCAGTCACCTTAGTGAGAGCACCTCACTGCCCACCTaGCTGTACCTCGACCCTTTCCACTCAGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: ASHLSESTSLPT*LYLDPFHSAQQ
Trigger: CTGCTGGGCTGAGTGGAAAGGGTCGAGGTACAGGCAGGTGGGCAGTGAGGTGCTCTCACTAAGGTGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp TGCCTGTACCTCGACCCTTTCCACTCAGCCCAGCAGTaGCTCTCTTCACAGGGACAGAATGCCCCAAGCACA +
Preference number: 3 (lower is better)
Translates to: CLYLDPFHSAQQ*LSSQGQNAPST
Trigger: TGTGCTTGGGGCATTCTGTCCCTGTGAAGAGAGGCACTGCTGGGCTGAGTGGAAAGGGTCGAGGTACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp CACCTCACCCTCCCAGGCACAACCACTTCCCCTCAGTaGGTACAGGGCTATGGTCACTTTGGAAGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: HLTLPGTTTSPQ*VQGYGHFGRSL
Trigger: TAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTGAGGGGAAGTGGTTGTGCCTGGGAGGGTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp CTCAGCCCAGCAGTGCCTCTCTTCACAGGGACAGAATaGCCCAAGCACAGGGCACCATGTTCTCATCAGCAA +
Preference number: 3 (lower is better)
Translates to: LSPAVPLFTGTE*PKHRAPCSHQQ
Trigger: TTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAGAGAGGCACTGCTGGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp CACTGGAGGCATCCAACTTCCAGGTTCCTTGGAAGCTaGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: HWRHPTSRFLGS*PSAPSAQHPSV
Trigger: AACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAGCTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp ACAGTATCTAGAGTCTCCAGGAGCCGACTTCCACGCTaGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGC +
Preference number: 3 (lower is better)
Translates to: TVSRVSRSRLPR*APSSLLPNMMS
Trigger: GCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAGTCGGCTCCTGGAGACTCTAGATACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CAA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGAACCCTCTAGAGCTTTaGTGTTCTCTGCTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: QGTMFSSASKAPLQPQALNPLEL*CSLLQP
Trigger: TGGCTGAAGCAGAGAACACAAAAGCTCTAGAGGGTT...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 72 bp CTAACCCAGACCCATGGTCCTTGTTCTGGATGTGAGTaGCACTGTGACACAGACCACTGGCCGCTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: LTQTHGPCSGCE*HCDTDHWPLSS
Trigger: AGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAACAAGGACCATGGGTCTGGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp TCAAAAAGAAAGAAGGCAGAGGCACCACCAGACCCCTaGCTTGTTCAGGGACAGCTCAGAGCTCCCAGGATC +
Preference number: 3 (lower is better)
Translates to: SKRKKAEAPPDP*LVQGQLRAPRI
Trigger: GATCCTGGGAGCTCTGAGCTGTCCCTGAACAAGGCAGGGGTCTGGTGGTGCCTCTGCCTTCTTTCTTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp AGGCACAACCACTTCCCCTCAGTGGGTACAGGGCTATaGTCACTTTGGAAGGTCCCTAGGGCAGTGCATGAT +
Preference number: 3 (lower is better)
Translates to: RHNHFPSVGTGL*SLWKVPRAVHD
Trigger: ATCATGCACTGCCCTAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTGAGGGGAAGTGGTTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp CATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTaGGGACCTTTTGTCACTACAACTCTGACGTACTCA +
Preference number: 3 (lower is better)
Translates to: HQQARLPFSLRP*GPFVTTTLTYS
Trigger: TGAGTACGTCAGAGTTGTAGTGACAAAAGGTCCCCAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CAA 90 bp GACTCTGTCTTTGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGGGATCAGGACACCAGACCCCTGCCTaGTTCAGGGACAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: DSVFVFRAPADSQAMGSGHQTPA*FRDSSE
Trigger: CTCTGAGCTGTCCCTGAACAAGGCAGGGGTCTGGTG...TCCTGATCCCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp TCCATTATGGGGGCCAAGGTCCCTGAAGTTCTACACTaGAGGCATCCAACTTCCAGGTTCCTTGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: SIMGAKVPEVLH*RHPTSRFLGSW
Trigger: CCAGCTTCCAAGGAACCTGGAAGTTGGATGCCTCCAGTGTAGAACTTCAGGGACCTTGGCCCCCATAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp CACTTCCCCTCAGTGGGTACAGGGCTATGGTCACTTTaGAAGGTCCCTAGGGCAGTGCATGATCTTCATCAT +
Preference number: 3 (lower is better)
Translates to: HFPSVGTGLWSL*KVPRAVHDLHH
Trigger: ATGATGAAGATCATGCACTGCCCTAGGGACCTTCCAAAGTGACCATAGCCCTGTACCCACTGAGGGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 72 bp ACCAAAGTGTCAGAACTCCTTTTCGCTATCCCAGGATaGCATTCTTCCAGGCCAGACCCCACAGCTCCATAC +
Preference number: 3 (lower is better)
Translates to: TKVSELLFAIPG*HSSRPDPTAPY
Trigger: GTATGGAGCTGTGGGGTCTGGCCTGGAAGAATGTCATCCTGGGATAGCGAAAAGGAGTTCTGACACTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp GGGGGTCACCACAACATGAGGAACCATATTATAGGTTaGAGCATTAGGAGGCTGAGAACCACTGCTCTAGGG +
Preference number: 3 (lower is better)
Translates to: GGHHNMRNHIIG*SIRRLRTTALG
Trigger: CCCTAGAGCAGTGGTTCTCAGCCTCCTAATGCTGCAACCTATAATATGGTTCCTCATGTTGTGGTGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 72 bp ATCCCTAACCCAAAGTCTTACTGGTCCATAACCCAATaGAGATACTCCTGGAGCCCCCAGAACGTCCTTCTC +
Preference number: 3 (lower is better)
Translates to: IPNPKSYWSITQ*RYSWSPQNVLL
Trigger: GAGAAGGACGTTCTGGGGGCTCCAGGAGTATCTTCATTGGGTTATGGACCAGTAAGACTTTGGGTTAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp TCCTCCGCTGAGGTCCTGGATGTACTGCCGAGTCTTTaGAGATGTCCTATATACATTGGAGCTTCCAAGTCT +
Preference number: 3 (lower is better)
Translates to: SSAEVLDVLPSL*RCPIYIGASKS
Trigger: AGACTTGGAAGCTCCAATGTATATAGGACATCTCCAAAGACTCGGCAGTACATCCAGGACCTCAGCGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR-3UTR CAA 90 bp CAGGAACAAGAGTGGCCATCCCTCCTTGAAATGACTTGTAAAACAGCTGACAGCTACCCGACTCTGTCTTaGTATTTAGAGCCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: QEQEWPSLLEMTCKTADSYPTLS*YLEPQL
Trigger: CAGCTGGGGCTCTAAATACAAAGACAGAGTCGGGTA...GCTGTCAGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR TCA 72 bp CGTGGCAAGCATCTGTTCGTCATATTTGCTCTCTCTTaGTCAACAAGTGGTCCCTGTAGTTTCTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: RGKHLFVIFALS*STSGPCSFSGC
Trigger: GCAGCCAGAGAAACTACAGGGACCACTTGTTGATCAAGAGAGAGCAAATATGACGAACAGATGCTTGCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp GGAGGACCAAGATGGAAGATGAGCAAACAGGGAAGTTaGACCCAAATGAACCCAATCTCATTGTCCCTTTGG +
Preference number: 3 (lower is better)
Translates to: GGPRWKMSKQGS*TQMNPISLSLW
Trigger: CCAAAGGGACAATGAGATTGGGTTCATTTGGGTGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp CTCTGCTTCAGCCACCAAATCATCTCCCCTTTGACGTaGCAAGCATCTGTTCGTCATATTTGCTCTCTCTTG +
Preference number: 3 (lower is better)
Translates to: LCFSHQIISPLT*QASVRHICSLL
Trigger: CAAGAGAGAGCAAATATGACGAACAGATGCTTGCCACGTCAAAGGGGAGATGATTTGGTGGCTGAAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp AGAGTGTGGATACCTGGCATGAGTCAGGAACAAGAGTaGCCATCCCTCCTTGAAATGACTTGTAAAACAGCT +
Preference number: 3 (lower is better)
Translates to: RVWIPGMSQEQE*PSLLEMTCKTA
Trigger: AGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CCA 72 bp AAAAACTATTGTGACAGGAAAAAGAGTGTGGATACCTaGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCT +
Preference number: 3 (lower is better)
Translates to: KNYCDRKKSVDT*HESGTRVAIPP
Trigger: AGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACACTCTTTTTCCTGTCACAATAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR GCA 72 bp TATACATTGGAGCTTCCAAGTCTTCAAGAATTACCCTaGTATAAGAAACACCTGGATTTCTTTTTGACTGCC +
Preference number: 3 (lower is better)
Translates to: YTLELPSLQELP*YKKHLDFFLTA
Trigger: GGCAGTCAAAAAGAAATCCAGGTGTTTCTTATAGCAGGGTAATTCTTGAAGACTTGGAAGCTCCAATGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp TCGCTATCCCAGGATGACATTCTTCCAGGCCAGACCCCACAGCTCCATACCTACGGAGCACCCCGGCGCTaGAGAAGGTGTGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSQDDILPGQTPQLHTYGAPRR*RRCAPW
Trigger: CCAGGGCGCACACCTTCTCCAGCGCCGGGGTGCTCC...GTAGGTATGGAGCTGTGGGGTCTGGCCTGGAAGAATGTCATCCTGGGATAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCAGAGCCCTCAGGATaGCGGGGTTCCAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GTECPKHRAPCSHQQARLPEPSG*RGSSPR
Trigger: CCTCGGGCTGGAACCCCGCCATCCTGAGGGCTCTGG...GAGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGTGCCTTCCCCACAGCTaGTGCCATCTGCCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALCLPHS*CHLPRG
Trigger: TCCCCTGGGCAGATGGCACCAGCTGTGGGGAAGGCA...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 72 bp GCTGGCCTTCAGCACCTTCTGCCCAGCACCCTTCTGTaGAAGCGTCTCCCCACAACTGGCCCGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AGLQHLLPSTLL*KRLPTTGPRSR
Trigger: CCTGCTTCTCGGGCCAGTTGTGGGGAGACGCTTCAACAGAAGGGTGCTGGGCAGAAGGTGCTGAAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGAAGCAAGGTCCCCAGCTaGCTGCCACCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRSKVPS*LPPSAQ
Trigger: CTGCGCGCTGGGTGGCAGGCAGCTGGGGACCTTGCT...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCCAAGCAGAGGCTCCTTaGTGCCCTGGGGAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLQAEAP*CPGESR
Trigger: CCGGGACTCCCCAGGGCAGCAAGGAGCCTCTGCTTG...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp TCGCTATCCCAGGATGACATTCTTCCAGGCCAGACCCCACAGCTCCATACCTACCCCGAGCCAGCAGCCTaGCTCCGTGGCCCACACACT +
Preference number: 4 (lower is better)
Translates to: SLSQDDILPGQTPQLHTYPEPAA*LRGPHT
Trigger: AGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGG...GTAGGTATGGAGCTGTGGGGTCTGGCCTGGAAGAATGTCATCCTGGGATAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCCGCAACGAGAGGTaGGGTCTCCGGAAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GTECPKHRAPCSHQQARLPRNER*GLRKAL
Trigger: TAGGGCCTTCCGGAGACCCCACCTCTCGTTGCGGGG...GAGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCCCACGCAGGCTCCCTTaGGGCAGAACTTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AREAGHEVDCALVNFPLPPRRLP*GRTCLP
Trigger: GGGAAGGCAAGTTCTGCCTCAAGGGAGCCTGCGTGG...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCACAGGACCTCCACGGTaGGTGGCTCCAGGATGGGTC +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLTGPPR*VAPGWV
Trigger: GACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGT...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCGTAGGGTTGCTGCACTaGCTCCGGGCCAGCTGCACG +
Preference number: 4 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASVGLLH*LRASCT
Trigger: CGTGCAGCTGGCCCGGAGGCAGTGCAGCAACCCTAC...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCAGAGTCGCGCCGCCGTaGCCAGCAGCGTCAGTAGAT +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLRVAPP*PAASVD
Trigger: ATCTACTGACGCTGCTGGCCACGGCGGCGCGACTCT...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCCCGCGCCGTGAAACTTaGCCATTGACTCGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLPRRET*PLTRPP
Trigger: TGGCGGACGAGTCAATGGTCAAGTTTCACGGCGCGG...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCGTCTGGCACACCATCTaGCCCTTGGCCTTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLVWHTI*PLALPV
Trigger: CACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGAC...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGATGCCTCCGGGCCAGCTaGACGCCCCCACCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGCLRAS*TPPPQV
Trigger: CACCTGCGGTGGGGGCGTGCAGCTGGCCCGGAGGCA...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GACTCTGTCTTTGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGGGATCAGGAAGGTCCCCAGCTGCCTaGCACCCAGCGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSVFVFRAPADSQAMGSGRSPAA*HPARRR
Trigger: CCTCCTGCGCGCTGGGTGGCAGGCAGCTGGGGACCT...TCCTGATCCCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGGGCATGTTGAACACATaGCCCAGCTCATGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALGMLNT*PSSWAV
Trigger: CACTGCCCATGAGCTGGGCCATGTGTTCAACATGCC...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGATGCCAGAGGCTGAGCTaGGGCAGGGCTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRCQRLS*GRAPSC
Trigger: GCAACTTGGAGCCCTGCCCCAGCTCAGCCTCTGGCA...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCGGTCCTTGGGGCGAGTaGACTTGTCCTCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: AREAGHEVDCALVNFPLPGPWGE*TCPPEV
Trigger: AACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACC...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGAGGCAGCGCTGCAGGCTaGCCAGGGGTTGGCACGGTC +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGGSAAG*PGVGTV
Trigger: GACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCC...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGCATTGGCTCGGCAGATaGGCTTACACTTGTCACGTG +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALHWLGR*AYTCHV
Trigger: CACGTGACAAGTGTAAGCTCATCTGCCGAGCCAATG...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACAACTGCCACAGCTCACTaGGCAAGGTCCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTTATAH*ARSPAA
Trigger: GGCAGCTGGGGACCTTGCTCAGTGAGCTGTGGCAGT...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATGCGGGAGCCAGGAACTaGGCATCTGGCGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HILLRRVRAPGYFCPREHAGARN*ASGVRC
Trigger: ACACCTGACGCCAGATGCCCAGTTCCTGGCTCCCGC...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGGGCTCGCTTCTCCAATaGCCGATGGTCTACATCACA +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALGSLLQ*PMVYIT
Trigger: TGTGATGTAGACCATCGGCCATTGGAGAAGCGAGCC...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGAGTAGTGGCGGCCATTaGTGTCCGGGTCCCGTCGGA +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMSSGGH*CPGPVG
Trigger: TCCGACGGGACCCGGACATCAATGGCCGCCACTACT...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCATGCCACAGCTAAAGTaGGCCGGTTGGTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLMPQLK*AGWCCG
Trigger: ACCACAGCACCAACCGGCTCACTTTAGCTGTGGCAT...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGACTGCCAGTGAGCCTCTaGAGCGGGACACCTAGATAC +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRLPVSL*SGTPRY
Trigger: GTATCTAGGTGTCCCGCTGCAGAGGCTCACTGGCAG...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGGGCAGGGCTCCAAGTTaGAAGATCGGTATTTCACTC +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALGRAPS*KIGISL
Trigger: GAGTGAAATACCGATCTTGCAACTTGGAGCCCTGCC...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGCTTCCCGGAAGCTCTTaGCAGAGGCTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMLPGSS*QRLSWG
Trigger: GCCCCAGCTCAGCCTCTGGCAAGAGCTTCCGGGAAG...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGACAGTACTGCATATATaGGCAGGGCTTAGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGTMFSSASKAPLQPQALTVLHI*AGLRAH
Trigger: GTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGT...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGAACACCATCTGCCCCTTaGCCTTGCCAGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRTPSAP*PCQCTT
Trigger: TGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGT...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGAGCAGCCTGCCTCCGTaGCCCACACACTTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMSSLPP*PTHLSG
Trigger: TCCGCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCT...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGAGCCCATCGTCCTCAATaGCAGAGCAGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRAHRPQ*QSSFSW
Trigger: CCAAGAGAAGCTGCTCTGTCATTGAGGACGATGGGC...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGGGCAGTGGTGAAGGCTaGTGGAAGCCCATCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMGSGEG*WKPIVL
Trigger: GAGGACGATGGGCTTCCATCAGCCTTCACCACTGCC...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACAGCTCATGGGCAGTGGTaGAGGCTGATGGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTAHGQW*RLMEAH
Trigger: ATGGGCTTCCATCAGCCTTCACCACTGCCCATGAGC...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CAGGAACAAGAGTGGCCATCCCTCCTTGAAATGACTTGTAAAACAGCTGACAGCGGTCCTCAGGCAGGGTaGTGGGCTTGCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QEQEWPSLLEMTCKTADSGPQAG*WACWAG
Trigger: ACCAGCCCAGCAAGCCCATCACCCTGCCTGAGGACC...GCTGTCAGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGCGTCGCAGCCAGCCTTaGTGCACTTGCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMRRSQP*CTCLGH
Trigger: GTGTCCAAGGCAAGTGCATCAAGGCTGGCTGCGACG...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCAGGAGGCAGTCACCATaGCCACTATCCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AREAGHEVDCALVNFPLPRRQSP*PLSRKS
Trigger: TGACTTCCTGGATAGTGGGCATGGTGACTGCCTCCT...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp TCGCTATCCCAGGATGACATTCTTCCAGGCCAGACCCCACAGCTCCATACCTACCCACTGCAGTGCCAGTaGCACTATAGCGTAGCACAC +
Preference number: 4 (lower is better)
Translates to: SLSQDDILPGQTPQLHTYPLQCQ*HYSVAH
Trigger: GTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGG...GTAGGTATGGAGCTGTGGGGTCTGGCCTGGAAGAATGTCATCCTGGGATAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTAGACCACCTCCCACTCTaGCTCGGAGCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLDHLPL*LGAASR
Trigger: CCTGCTGGCAGCTCCGAGCCAGAGTGGGAGGTGGTC...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTACGCGCCCGTCCGCCGTaGCTTATAAGGGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLRARPP*LIRVQS
Trigger: GCTCTGGACCCTTATAAGCCACGGCGGACGGGCGCG...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCCAGAGCAGCTTCTCTTaGGGTCACACATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASQSSFS*GHTWCP
Trigger: TGGGCACCATGTGTGACCCCAAGAGAAGCTGCTCTG...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCTTGGCACGGTCAATCTaGATGAGGGTCGGAGACATC +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLLARSI*MRVGDI
Trigger: GATGTCTCCGACCCTCATCCAGATTGACCGTGCCAA...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGGGGAAGTGGCGAGTCTaGCACACCATCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMGKWRV*HTICPL
Trigger: CAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCC...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGATGGGTCGAGAAGCCTaGAGGCTCTCCACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMMGREA*RLSTAV
Trigger: CACTGCAGTGGAGAGCCTGCAGGCTTCTCGACCCAT...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GACTCTGTCTTTGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGGGATCAGGAATGGGCTTGCTGGGCTaGTCCAGGAGGCAGTCACCA +
Preference number: 4 (lower is better)
Translates to: DSVFVFRAPADSQAMGSGMGLLG*SRRQSP
Trigger: TGGTGACTGCCTCCTGGACCAGCCCAGCAAGCCCAT...TCCTGATCCCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGATTGATGCACTTGCCTTaGACACAGACCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRLMHLP*TQTEVE
Trigger: CTCCACCTCGGTCTGTGTCCAAGGCAAGTGCATCAA...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATAGGCGCCGGCAGGGATaGCCACTACAAAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: HILLRRVRAPGYFCPREHRRRQG*PLQNCS
Trigger: GCTACAATTTTGTAGTGGCCATCCCTGCCGGCGCCT...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGATAGGTCCTGTCTGGTaGAGAGGATGGCTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMIGPVW*RGWLCP
Trigger: GGGACACAGCCATCCTCTTCACCAGACAGGACCTAT...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATTGTCATGGGGCATGTTaGACACATGGCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HILLRRVRAPGYFCPREHCHGAC*THGPAH
Trigger: ATGAGCTGGGCCATGTGTTCAACATGCCCCATGACA...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAGTTGTCATCTCCAATaGGCCCCTTGTAACCACGCT +
Preference number: 4 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASSCHLQ*APCNHA
Trigger: AGCGTGGTTACAAGGGGCTCATTGGAGATGACAACT...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCTGTCAAATTTCTTCTTaGAGCCCAGATTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLCQISS*SPDSRR
Trigger: GCGACGGGAATCTGGGCTCCAAGAAGAAATTTGACA...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCAGCAGGTATTTGCCTTaGCTGTTCTTCAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GTECPKHRAPCSHQQARLSRYLP*LFFKAR
Trigger: CCTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCT...GAGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGAGACCTCCACGGTGAGTaGCTCCAGGATGGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGDLHGE*LQDGSR
Trigger: TCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTC...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCTCTGGCTGCTCTACTTaGTTGGAAAGGCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: AREAGHEVDCALVNFPLPSGCST*LERLRT
Trigger: TGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGA...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATCTTGGTTGGAAAGGCTaGGAACACTGTTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: HILLRRVRAPGYFCPREHLGWKG*EHCCAT
Trigger: TGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAG...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCTCTGCCCCTTGGCCTTaGCAGTGCACCACAGCTTTG +
Preference number: 4 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPSAPWP*QCTTAL
Trigger: CAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGA...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGGTCGGAGACATCATGTaGTTGGCTCTGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMVGDIM*LALSFP
Trigger: TGGGAAGCTCAGAGCCAACCACATGATGTCTCCGAC...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCAACCTCGAGGGTCCTTaGGGCGAGTGGACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPNLEGP*GEWTCP
Trigger: AGGACAAGTCCACTCGCCCCAAGGACCCTCGAGGTT...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGAGTGAAACTTGACCATTaGCTCGTCCGCCACCACCAG +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGVKLDH*LVRHHQ
Trigger: CTGGTGGTGGCGGACGAGTCAATGGTCAAGTTTCAC...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATTTGTTCAGCTTTTTCTaGCAGGCACAGAAGTTGCGC +
Preference number: 4 (lower is better)
Translates to: HILLRRVRAPGYFCPREHLFSFF*QAQKLR
Trigger: GCGCAACTTCTGTGCCTGGCAGAAAAAGCTGAACAA...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACATCCCAGTACTCAGGGTaGTTATCGCTCACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTSQYSG*LSLTLF
Trigger: GAACAAAGTGAGCGATAAGCACCCTGAGTACTGGGA...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGACTGCAGGCTCTCCACTaGAGTGCCAGTGCCACTATA +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGLQALH*SASATI
Trigger: TATAGTGGCACTGGCACTGCAGTGGAGAGCCTGCAG...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR GCA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCGCTTCTGTAGGCCACTaGCACAGCTCACTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPASVGH*HSSLSK
Trigger: CTTGCTCAGTGAGCTGTGGCAGTGGCCTACAGAAGC...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGTGTCTCCACGTACCGTaGTATAGACACGAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMCLHVP*YRHEAL
Trigger: AAGCGCTTCGTGTCTATACCACGGTACGTGGAGACA...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGATCCAAATCCGCGCCGTaGAACTTGACCATTGACTCG +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGSKSAP*NLTIDS
Trigger: CGAGTCAATGGTCAAGTTTCACGGCGCGGATTTGGA...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCTCATGTGGTTGGCTCTaGGCTTCCCAAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPSCGWL*ASQTPP
Trigger: AGGAGGTGTTTGGGAAGCTCAGAGCCAACCACATGA...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGACACCCGGTACTTGTTTaGGTTGTGTCTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGHPVLV*VVSLHA
Trigger: TGCGTGGAGAGACACAACCCAAACAAGTACCGGGTG...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 72 bp AACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTaGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGG +
Preference number: 4 (lower is better)
Translates to: NLRKKIPYPTLS*YLEPQLIARLW
Trigger: CCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR TCA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGTGTGGTTGTAGCCATTaGAAGCTTCACATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMCGCSH*KLHIAL
Trigger: AAGAGCAATGTGAAGCTTTCAATGGCTACAACCACA...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CCA 90 bp CAGGAACAAGAGTGGCCATCCCTCCTTGAAATGACTTGTAAAACAGCTGACAGCACCTTCACGTTGTCATaGGGCATGTTGAACACATGG +
Preference number: 4 (lower is better)
Translates to: QEQEWPSLLEMTCKTADSTFTLS*GMLNTW
Trigger: CCATGTGTTCAACATGCCCCATGACAACGTGAAGGT...GCTGTCAGCTGTTTTACAAGTCATTTCAAGGAGGGATGGCCACTCTTGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 72 bp AGGAGGACCAAGATGGAAGATGAGCAAACAGGGAAGTaGCACCCAAATGAACCCAATCTCATTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RRTKMEDEQTGK*HPNEPNLIVPL
Trigger: CAAAGGGACAATGAGATTGGGTTCATTTGGGTGCAACTTCCCTGTTTGCTCATCTTCCATCTTGGTCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 72 bp ATGTACTGCCGAGTCTTTGGAGATGTCCTATATACATaGGAGCTTCCAAGTCTTCAAGAATTACCCTGCTAT +
Preference number: 4 (lower is better)
Translates to: MYCRVFGDVLYT*ELPSLQELPCY
Trigger: ATAGCAGGGTAATTCTTGAAGACTTGGAAGCTCCAATGTATATAGGACATCTCCAAAGACTCGGCAGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
3UTR CAA 72 bp GTCAATCTACCCTTTCATAGGGGTTGCTTAAGACCATaGGAAAACATAGAAATTTACAGTATGATTCACAAC +
Preference number: 4 (lower is better)
Translates to: VNLPFHRGCLRP*ENIEIYSMIHN
Trigger: GTTGTGAATCATACTGTAAATTTCTATGTTTTCCAATGGTCTTAAGCAACCCCTATGAAAGGGTAGATTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CCCAGACCTGCGGCGGTTGTGGCTCTCCCCCGCGCCCGTCCGCCGTaGCTTATAAGGGTCCAGAGCCCTCAGGATGGCGGGGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PRPAAVVALPRARPP*LIRVQSPQDGGVPA
Trigger: GGCTGGAACCCCGCCATCCTGAGGGCTCTGGACCCTTATAAGCCACGGCGGACGGGCGCGGGGGAGAGCCACAACCGCCGCAGGTCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp CCTACAGGAGCACCCCGGCGCTGGAGAAGGTGTGCGCCCTGGCTGTaGCGCTGCGCCTCTGGCGCGCTGGTGTTGGGCAGAGGGCTAATG +
Preference number: 5 (lower is better)
Translates to: PTGAPRRWRRCAPWL*RCASGALVLGRGLM
Trigger: CATTAGCCCTCTGCCCAACACCAGCGCGCCAGAGGCGCAGCGTCACAGCCAGGGCGCACACCTTCTCCAGCGCCGGGGTGCTCCTGTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CCGGCGCTGGAGAAGGTGTGCGCCCTGGCTGTGACGCTGCGCCTCTaGCGCGCTGGTGTTGGGCAGAGGGCTAATGACATACTCCGCACC +
Preference number: 5 (lower is better)
Translates to: PALEKVCALAVTLRL*RAGVGQRANDILRT
Trigger: GGTGCGGAGTATGTCATTAGCCCTCTGCCCAACACCAGCGCGCCAGAGGCGCAGCGTCACAGCCAGGGCGCACACCTTCTCCAGCGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGCCAGACCTGCGGCGGTaGTGGCTCTCCCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: QGTMFSSASKAPLQPQALPDLRR*WLSPAP
Trigger: GGGCGCGGGGGAGAGCCACAACCGCCGCAGGTCTGG...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp GCACACGGGGCGGTGTCATCTTCCCCACCGACAGGACCTCCACGGTaGGTGGCTCCAGGATGGGTCGAGAAGCCTGCAGGCTCTCCACTG +
Preference number: 5 (lower is better)
Translates to: AHGAVSSSPPTGPPR*VAPGWVEKPAGSPL
Trigger: CAGTGGAGAGCCTGCAGGCTTCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGTCGGTGGGGAAGATGACACCGCCCCGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp GCTGGCTCAAACTGTAGCTTGTGCCCGGCAGGTCCTCAGGCAGGGTaGTGGGCTTGCTGGGCTGGTCCAGGAGGCAGTCACCATGCCCAC +
Preference number: 5 (lower is better)
Translates to: AGSNCSLCPAGPQAG*WACWAGPGGSHHAH
Trigger: GTGGGCATGGTGACTGCCTCCTGGACCAGCCCAGCAAGCCCATCACCCTGCCTGAGGACCTGCCGGGCACAAGCTACAGTTTGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CCTCCTGTAGTAGTGGCGGCCATTGATGTCCGGGTCCCGTCGGATTaGAACGACCACCTCCCACTCTGGCTCGGAGCTGCCAGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: PPVVVAAIDVRVPSD*NDHLPLWLGAASRS
Trigger: CGACCTGCTGGCAGCTCCGAGCCAGAGTGGGAGGTGGTCGTTCCAATCCGACGGGACCCGGACATCAATGGCCGCCACTACTACAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp ACGGGGCGGTGTCATCTTCCCCACCGACAGGACCTCCACGGTGAGTaGCTCCAGGATGGGTCGAGAAGCCTGCAGGCTCTCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: TGRCHLPHRQDLHGE*LQDGSRSLQALHCS
Trigger: ACTGCAGTGGAGAGCCTGCAGGCTTCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGTCGGTGGGGAAGATGACACCGCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp GATCCCCGGAGTCCTCCGTACCCCTCCTGTAGTAGTGGCGGCCATTaGTGTCCGGGTCCCGTCGGATTGGAACGACCACCTCCCACTCTG +
Preference number: 5 (lower is better)
Translates to: DPRSPPYPSCSSGGH*CPGPVGLERPPPTL
Trigger: CAGAGTGGGAGGTGGTCGTTCCAATCCGACGGGACCCGGACATCAATGGCCGCCACTACTACAGGAGGGGTACGGAGGACTCCGGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp TTGCGGCGTAAGTCACACTGGTCCCGAGCCAGCAGCCTGCCTCCGTaGCCCACACACTTGAGCGGACGCCTCTTAAATCCACGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LRRKSHWSRASSLPP*PTHLSGRLLNPRPQ
Trigger: CTGTGGCCGTGGATTTAAGAGGCGTCCGCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTGACTTACGCCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp GCTTCTGTAGGCCACTGCCACAGCTCACTGAGCAAGGTCCCCAGCTaGCTGCCACCCAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: ASVGHCHSSLSKVPS*LPPSAQEVCYLAAL
Trigger: TAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGGGTGGCAGGCAGCTGGGGACCTTGCTCAGTGAGCTGTGGCAGTGGCCTACAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CTTGTGCCCGGCAGGTCCTCAGGCAGGGTGATGGGCTTGCTGGGCTaGTCCAGGAGGCAGTCACCATGCCCACTATCCAGGAAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: LVPGRSSGRVMGLLG*SRRQSPCPLSRKSV
Trigger: TACTGACTTCCTGGATAGTGGGCATGGTGACTGCCTCCTGGACCAGCCCAGCAAGCCCATCACCCTGCCTGAGGACCTGCCGGGCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp GTAGGGCTCCCACTTGGCCCAAGAGCCGTCCACCCGGTACTTGTTTaGGTTGTGTCTCTCCACGCAGGCTCCCTTGAGGCAGAACTTGCC +
Preference number: 5 (lower is better)
Translates to: VGLPLGPRAVHPVLV*VVSLHAGSLEAELA
Trigger: GGCAAGTTCTGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACCGGGTGGACGGCTCTTGGGCCAAGTGGGAGCCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp AAGACGCAGAAGTCTAATTCCTGGGGCTTGCGGCGTAAGTCACACTaGTCCCGAGCCAGCAGCCTGCCTCCGTGGCCCACACACTTGAGC +
Preference number: 5 (lower is better)
Translates to: KTQKSNSWGLRRKSH*SRASSLPPWPTHLS
Trigger: GCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTGACTTACGCCGCAAGCCCCAGGAATTAGACTTCTGCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCATAGACACGAAGCGCTaGGCGCGCCCAGACCTGCGG +
Preference number: 5 (lower is better)
Translates to: AREAGHEVDCALVNFPLPIDTKR*ARPDLR
Trigger: CCGCAGGTCTGGGCGCGCCAAGCGCTTCGTGTCTAT...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCACAAGCAGAGGCTCCTaGCTGCCCTGGGGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: AREAGHEVDCALVNFPLPTSRGS*LPWGVP
Trigger: CGGGACTCCCCAGGGCAGCAAGGAGCCTCTGCTTGT...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCCCCTTCAGCCTCAGGCCCTGTTGGGGCGAGTGGACTaGTCCTCCCGAGGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QGTMFSSASKAPLQPQALLGRVD*SSRGSL
Trigger: CAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAA...CAGGGCCTGAGGCTGAAGGGGAGCCTTGCTTGCTGATGAGAACATGGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp CCCAGGGGAAGTGGCGAGTCTGGCACACCATCTGCCCCTTGGCCTTaGCAGTGCACCACAGCTTTGTACAGTACTGCATATATGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PRGSGESGTPSAPWP*QCTTALYSTAYMGR
Trigger: CCTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp GTGGCTCCAGGATGGGTCGAGAAGCCTGCAGGCTCTCCACTGCAGTaGCAGTGCCACTATAGCGTAGCACACTGCCTTTTACCACCAGGT +
Preference number: 5 (lower is better)
Translates to: VAPGWVEKPAGSPLQ*QCHYSVAHCLLPPG
Trigger: ACCTGGTGGTAAAAGGCAGTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGGAGAGCCTGCAGGCTTCTCGACCCATCCTGGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CTCGAGGGTCCTTGGGGCGAGTGGACTTGTCCTCCCGAGGTTCTTTaGGCAGGTAGAAAGAATAACGCACACGGGGCGGTGTCATCTTCC +
Preference number: 5 (lower is better)
Translates to: LEGPWGEWTCPPEVL*AGRKNNAHGAVSSS
Trigger: GGAAGATGACACCGCCCCGTGTGCGTTATTCTTTCTACCTGCCCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACCCTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CCTGCCACCCAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTTaGTTGGAAAGGCTGAGAACACTGTTGCGCAACACGGGGGAACCT +
Preference number: 5 (lower is better)
Translates to: PATQRAGGLLSGCST*LERLRTLLRNTGEP
Trigger: AGGTTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGGGTGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp AGGTCCCCAGCTGCCTGCCACCCAGCGCGCAGGAGGTCTGTTATCTaGCTGCTCTACTTGGTTGGAAAGGCTGAGAACACTGTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: RSPAACHPARRRSVI*LLYLVGKAENTVAQ
Trigger: TTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGGGTGGCAGGCAGCTGGGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp GCGCAGGAGGTCTGTTATCTGGCTGCTCTACTTGGTTGGAAAGGCTaGGAACACTGTTGCGCAACACGGGGGAACCTCGAGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: AQEVCYLAALLGWKG*EHCCATRGNLEGPW
Trigger: CCAAGGACCCTCGAGGTTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp ATCTGCCCCTTGGCCTTGCCAGTGCACCACAGCTTTGTACAGTACTaGATATATGGGCAGGGCTTAGAGCCCACCCCAAAGGCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ICPLALPVHHSFVQY*IYGQGLEPTPKASS
Trigger: CGAGCTGGCCTTTGGGGTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp ATAATGGCAGCGCTGCAGGCTGACCAGGGGTTGGCACGGTCAATCTaGATGAGGGTCGGAGACATCATGTGGTTGGCTCTGAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IMAALQADQGLARSI*MRVGDIMWLALSFP
Trigger: TGGGAAGCTCAGAGCCAACCACATGATGTCTCCGACCCTCATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCCATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CTTGGCCTTGCCAGTGCACCACAGCTTTGTACAGTACTGCATATATaGGCAGGGCTTAGAGCCCACCCCAAAGGCCAGCTCGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: LGLASAPQLCTVLHI*AGLRAHPKGQLALL
Trigger: CAGCAGTGCGAGCTGGCCTTTGGGGTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CACTGTTGCGCAACACGGGGGAACCTCGAGGGTCCTTGGGGCGAGTaGACTTGTCCTCCCGAGGTTCTTTGGGCAGGTAGAAAGAATAAC +
Preference number: 5 (lower is better)
Translates to: HCCATRGNLEGPWGE*TCPPEVLWAGRKNN
Trigger: GTTATTCTTTCTACCTGCCCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACCCTCGAGGTTCCCCCGTGTTGCGCAACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCACGATGTTGATAGGGTaGAGGATGCTGGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: AREAGHEVDCALVNFPLPTMLIG*RMLGWR
Trigger: CCGCCACCCCAGCATCCTCAACCCTATCAACATCGT...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCAGGCTGACCAGGGGTaGGCACGGTCAATCTGGATG +
Preference number: 5 (lower is better)
Translates to: RDRMPQAQGTMFSSASKAQADQG*ARSIWM
Trigger: CATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTG...AGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCATCTGCCCCTTGGCCTaGCCAGTGCACCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLICPLA*PVHHSF
Trigger: AAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGAT...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CTTCACAGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCTCCACGCAGGCTCCCTaGAGGCAGAACTTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LHRDRMPQAQGTMFSSASSTQAP*RQNLPS
Trigger: GGAAGGCAAGTTCTGCCTCAAGGGAGCCTGCGTGGA...GCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp GCAGGCTCTCCACTGCAGTGCCAGTGCCACTATAGCGTAGCACACTaGCTTTTACCACCAGGTCCCGCTCTACAGCGGATACCACAAAGT +
Preference number: 5 (lower is better)
Translates to: AGSPLQCQCHYSVAH*LLPPGPALQRIPQS
Trigger: ACTTTGTGGTATCCGCTGTAGAGCGGGACCTGGTGGTAAAAGGCAGTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGGAGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 90 bp CAGGGGTTGGCACGGTCAATCTGGATGAGGGTCGGAGACATCATGTaGTTGGCTCTGAGCTTCCCAAACACCTCCTCACACACCTTCACG +
Preference number: 5 (lower is better)
Translates to: QGLARSIWMRVGDIM*LALSFPNTSSHTFT
Trigger: CGTGAAGGTGTGTGAGGAGGTGTTTGGGAAGCTCAGAGCCAACCACATGATGTCTCCGACCCTCATCCAGATTGACCGTGCCAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCAGGCGAGAGCCAGGATaGAGATGCCCAGTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLRREPG*RCPVEA
Trigger: TGCTTCTACTGGGCATCTCAATCCTGGCTCTCGCCT...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACATCTGGCGCGCTGGTGTaGGGCAGAGGGCTAATGACA +
Preference number: 5 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTSGALV*GRGLMT
Trigger: TGTCATTAGCCCTCTGCCCAACACCAGCGCGCCAGA...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATGCGTTGCCTGTGACCTaGGGCCCAGTGTCACGATCT +
Preference number: 5 (lower is better)
Translates to: HILLRRVRAPGYFCPREHALPVT*GPVSRS
Trigger: AGATCGTGACACTGGGCCCAAGGTCACAGGCAACGC...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCTTGGCAGGGGTAGGGTaGCTGCACTGCCTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPLAGVG*LHCLRA
Trigger: GGCCCGGAGGCAGTGCAGCAACCCTACCCCTGCCAA...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp ATGCCCACTATCCAGGAAGTCAGTAATAATGGCAGCGCTGCAGGCTaGCCAGGGGTTGGCACGGTCAATCTGGATGAGGGTCGGAGACAT +
Preference number: 5 (lower is better)
Translates to: MPTIQEVSNNGSAAG*PGVGTVNLDEGRRH
Trigger: ATGTCTCCGACCCTCATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCCATTATTACTGACTTCCTGGATAGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCAGAGTCAGGGCCGCGTaGCCTGTGACCTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPRVRAA*PVTLGP
Trigger: TGGGCCCAAGGTCACAGGCAACGCGGCCCTGACTCT...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCCGAGAAGCAGGGCATGAGGTAGACTGTGCATTAGTTAACTTCCCCCTGCCCTTGTCATGGGGCATGTaGAACACATGGCCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AREAGHEVDCALVNFPLPLSWGM*NTWPSS
Trigger: TGAGCTGGGCCATGTGTTCAACATGCCCCATGACAA...GGGCAGGGGGAAGTTAACTAATGCACAGTCTACCTCATGCCCTGCTTCTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGATGCCGAGCTCCCAAGTaGGGCAGGGTTCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGCRAPK*GRVPHR
Trigger: CCTGTGGGGAACCCTGCCCAACTTGGGAGCTCGGCA...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCCACACCATCTGCCCCTaGGCCTTGCCAGTGCACCAC +
Preference number: 5 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPHTICP*ALPVHH
Trigger: GTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTG...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGCCACCCGGTACTTGTTaGGGTTGTGTCTCTCCACGC +
Preference number: 5 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMPPGTC*GCVSPR
Trigger: GCGTGGAGAGACACAACCCAAACAAGTACCGGGTGG...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGGACAGAATGCCCCAAGCACAGGGCACCATGTTCTCATCAGCAAGCAAGGCTCAGATGAGCTTACACTaGTCACGTGGTGACACGCCT +
Preference number: 5 (lower is better)
Translates to: RDRMPQAQGTMFSSASKAQMSLH*SRGDTP
Trigger: AGGCGTGTCACCACGTGACAAGTGTAAGCTCATCTG...AGCCTTGCTTGCTGATGAGAACATGGTGCCCTGTGCTTGGGGCATTCTGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GTGTGGATACCTGGCATGAGTCAGGAACAAGAGTGGCCATCCCTCCTTGAAATGCCGTGGCCCACACACTaGAGCGGACGCCTCTTAAAT +
Preference number: 5 (lower is better)
Translates to: VWIPGMSQEQEWPSLLEMPWPTH*SGRLLN
Trigger: ATTTAAGAGGCGTCCGCTCAAGTGTGTGGGCCACGG...CATTTCAAGGAGGGATGGCCACTCTTGTTCCTGACTCATGCCAGGTATCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 90 bp CTGCCTTTTACCACCAGGTCCCGCTCTACAGCGGATACCACAAAGTaGCCATTGAGCAGGTATTTGCCTTGGCTGTTCTTCAAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPFTTRSRSTADTTK*PLSRYLPWLFFKAR
Trigger: CCTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGAGCGGGACCTGGTGGTAAAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGACCGTCGCAGCCAGCCTaGATGCACTTGCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGPSQPA*MHLPWT
Trigger: TGTCCAAGGCAAGTGCATCAAGGCTGGCTGCGACGG...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GTTCTGGATGTGAGTGACACTGTGACACAGACCACTGGCCGCTGTCCTCTGCTCTTGTCAAATTTCTTCTaGGAGCCCAGATTCCCGTCG +
Preference number: 5 (lower is better)
Translates to: VLDVSDTVTQTTGRCPLLLSNFF*EPRFPS
Trigger: CGACGGGAATCTGGGCTCCAAGAAGAAATTTGACAA...GAGCAGAGGACAGCGGCCAGTGGTCTGTGTCACAGTGTCACTCACATCCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GAGGAGGTCGCTGTCACCTCAGCAGCCAGCTCCCATGTATACACAGTATACACAGGCTGCTCTACTTGGTaGGAAAGGCTGAGAACACTG +
Preference number: 5 (lower is better)
Translates to: EEVAVTSAASSHVYTVYTGCSTW*ERLRTL
Trigger: CAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCC...TGTGTATACTGTGTATACATGGGAGCTGGCTGCTGAGGTGACAGCGACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CACATCCTGCTGAGACGGGTGAGAGCACCAGGTTACTTCTGTCCTAGAGAGCATTCACACACCTTCACGTaGTCATGGGGCATGTTGAAC +
Preference number: 5 (lower is better)
Translates to: HILLRRVRAPGYFCPREHSHTFT*SWGMLN
Trigger: GTTCAACATGCCCCATGACAACGTGAAGGTGTGTGA...ATGCTCTCTAGGACAGAAGTAACCTGGTGCTCTCACCCGTCTCAGCAGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp ATTTGCCTTGGCTGTTCTTCAAAGCCAGGTAGTTGTCATCTCCAATaGGCCCCTTGTAACCACGCTGACGGATATCAATGCTGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: ICLGCSSKPGSCHLQ*APCNHADGYQCWRR
Trigger: GCGCCTCCAGCATTGATATCCGTCAGCGTGGTTACAAGGGGCTCATTGGAGATGACAACTACCTGGCTTTGAAGAACAGCCAAGGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 90 bp TTACCACCAGGTCCCGCTCTACAGCGGATACCACAAAGTGCCCATTaGGCAGGTATTTGCCTTGGCTGTTCTTCAAAGCCAGGTAGTTGT +
Preference number: 5 (lower is better)
Translates to: LPPGPALQRIPQSAH*AGICLGCSSKPGSC
Trigger: ACAACTACCTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGAGCGGGACCTGGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GCCTTAACCATCCAGGTTGCAAAATGCTGGTCTTTCAAGGAGGACCAAGATGGACGGTACTTGTTTGGGTaGTGTCTCTCCACGCAGGCT +
Preference number: 5 (lower is better)
Translates to: ALTIQVAKCWSFKEDQDGRYLFG*CLSTQA
Trigger: AGCCTGCGTGGAGAGACACAACCCAAACAAGTACCG...TCCATCTTGGTCCTCCTTGAAAGACCAGCATTTTGCAACCTGGATGGTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp CTTCCACGCTGGGCTCCTTCCAGCCTCCTCCCTAACATGATGAGCTCCATAAGAATTGAAAGCTTCACATaGCTCTTCCCGGAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LPRWAPSSLLPNMMSSIRIESFT*LFPEAL
Trigger: AAGAGCTTCCGGGAAGAGCAATGTGAAGCTTTCAAT...TCTTATGGAGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTACTTGATGCACTTGCCTaGGACACAGACCGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLLDALA*DTDRGG
Trigger: TCCACCTCGGTCTGTGTCCAAGGCAAGTGCATCAAG...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTAGGGCAGGGCTCCAAGTaGCAAGATCGGTATTTCACT +
Preference number: 5 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLGQGSK*QDRYFT
Trigger: AGTGAAATACCGATCTTGCAACTTGGAGCCCTGCCC...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GGAGGGATTGGTCTAAACCCTCCAATCAGTGCACACAATAGGCAGAAGAGACTATTGACCACCACGATGTaGATAGGGTTGAGGATGCTG +
Preference number: 5 (lower is better)
Translates to: GGIGLNPPISAHNRQKRLLTTTM*IGLRML
Trigger: CAGCATCCTCAACCCTATCAACATCGTGGTGGTCAA...TAGTCTCTTCTGCCTATTGTGTGCACTGATTGGAGGGTTTAGACCAATCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp GACTCTGTCTTTGTATTTAGAGCCCCAGCTGATAGCCAGGCTATGGGATCAGGACCTAAGAGTAGCACCTaGACCACCACGATGTTGATA +
Preference number: 5 (lower is better)
Translates to: DSVFVFRAPADSQAMGSGPKSST*TTTMLI
Trigger: TATCAACATCGTGGTGGTCAAGGTGCTACTCTTAGG...TCCTGATCCCATAGCCTGGCTATCAGCTGGGGCTCTAAATACAAAGACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCGAGCAGGTATTTGCCTaGGCTGTTCTTCAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPEQVFA*AVLQSQ
Trigger: CTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTC...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS-3UTR CAA 90 bp AGGAACCTGAGGAAGAAGATACCCTACCCGACTCTGTCTTTGTATTTAGAGCCCATCTGGCTGCTCTACTaGGTTGGAAAGGCTGAGAAC +
Preference number: 5 (lower is better)
Translates to: RNLRKKIPYPTLSLYLEPIWLLY*VGKAEN
Trigger: GTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGAT...GGGCTCTAAATACAAAGACAGAGTCGGGTAGGGTATCTTCTTCCTCAGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp ACTGCCTCCGGGCCAGCTGCACGCCCCCACCGCAGGTaGGGGAGCAGGAACCGTAGGGCTCCCACTTGGCCC +
Preference number: 6 (lower is better)
Translates to: TASGPAARPHRR*GSRNRRAPTWP
Trigger: GGGCCAAGTGGGAGCCCTACGGTTCCTGCTCCCGCACCTGCGGTGGGGGCGTGCAGCTGGCCCGGAGGCAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp GCAGGGGTAGGGTTGCTGCACTGCCTCCGGGCCAGCTaGACGCCCCCACCGCAGGTGCGGGAGCAGGAACCG +
Preference number: 6 (lower is better)
Translates to: AGVGLLHCLRAS*TPPPQVREQEP
Trigger: CGGTTCCTGCTCCCGCACCTGCGGTGGGGGCGTGCAGCTGGCCCGGAGGCAGTGCAGCAACCCTACCCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp GACACGAAGCGCTTGGCGCGCCCAGACCTGCGGCGGTaGTGGCTCTCCCCCGCGCCCGTCCGCCGTGGCTTA +
Preference number: 6 (lower is better)
Translates to: DTKRLARPDLRR*WLSPAPVRRGL
Trigger: TAAGCCACGGCGGACGGGCGCGGGGGAGAGCCACAACCGCCGCAGGTCTGGGCGCGCCAAGCGCTTCGTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GCGGCGGTTGTGGCTCTCCCCCGCGCCCGTCCGCCGTaGCTTATAAGGGTCCAGAGCCCTCAGGATGGCGGG +
Preference number: 6 (lower is better)
Translates to: AAVVALPRARPP*LIRVQSPQDGG
Trigger: CCCGCCATCCTGAGGGCTCTGGACCCTTATAAGCCACGGCGGACGGGCGCGGGGGAGAGCCACAACCGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp GCCACCACCAGTGTCTCCACGTACCGTGGTATAGACACGAAGCGCTaGGCGCGCCCAGACCTGCGGCGGTTGTGGCTCTCCCCCGCGCCC +
Preference number: 6 (lower is better)
Translates to: ATTSVSTYRGIDTKR*ARPDLRRLWLSPAP
Trigger: GGGCGCGGGGGAGAGCCACAACCGCCGCAGGTCTGGGCGCGCCAAGCGCTTCGTGTCTATACCACGGTACGTGGAGACACTGGTGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CGGGTCCCGTCGGATTGGAACGACCACCTCCCACTCTaGCTCGGAGCTGCCAGCAGGTCGCCAGGCGAGAGC +
Preference number: 6 (lower is better)
Translates to: RVPSDWNDHLPL*LGAASRSPGES
Trigger: GCTCTCGCCTGGCGACCTGCTGGCAGCTCCGAGCCAGAGTGGGAGGTGGTCGTTCCAATCCGACGGGACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp TCCGCCGTGGCTTATAAGGGTCCAGAGCCCTCAGGATaGCGGGGTTCCAGCCCGAGGCCACCCCGCAACGAG +
Preference number: 6 (lower is better)
Translates to: SAVAYKGPEPSG*RGSSPRPPRNE
Trigger: CTCGTTGCGGGGTGGCCTCGGGCTGGAACCCCGCCATCCTGAGGGCTCTGGACCCTTATAAGCCACGGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp GCGGTGTCATCTTCCCCACCGACAGGACCTCCACGGTaGGTGGCTCCAGGATGGGTCGAGAAGCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: AVSSSPPTGPPR*VAPGWVEKPAG
Trigger: GCCTGCAGGCTTCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGTCGGTGGGGAAGATGACACCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp GGCCACTGCCACAGCTCACTGAGCAAGGTCCCCAGCTaGCTGCCACCCAGCGCGCAGGAGGTCTGTTATCTG +
Preference number: 6 (lower is better)
Translates to: GHCHSSLSKVPS*LPPSAQEVCYL
Trigger: CAGATAACAGACCTCCTGCGCGCTGGGTGGCAGGCAGCTGGGGACCTTGCTCAGTGAGCTGTGGCAGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GTAGTGGCGGCCATTGATGTCCGGGTCCCGTCGGATTaGAACGACCACCTCCCACTCTGGCTCGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: VVAAIDVRVPSD*NDHLPLWLGAA
Trigger: GGCAGCTCCGAGCCAGAGTGGGAGGTGGTCGTTCCAATCCGACGGGACCCGGACATCAATGGCCGCCACTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GAGAAGGTGTGCGCCCTGGCTGTGACGCTGCGCCTCTaGCGCGCTGGTGTTGGGCAGAGGGCTAATGACATA +
Preference number: 6 (lower is better)
Translates to: EKVCALAVTLRL*RAGVGQRANDI
Trigger: TATGTCATTAGCCCTCTGCCCAACACCAGCGCGCCAGAGGCGCAGCGTCACAGCCAGGGCGCACACCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp AGTGTCTCCACGTACCGTGGTATAGACACGAAGCGCTaGGCGCGCCCAGACCTGCGGCGGTTGTGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SVSTYRGIDTKR*ARPDLRRLWLS
Trigger: GGAGAGCCACAACCGCCGCAGGTCTGGGCGCGCCAAGCGCTTCGTGTCTATACCACGGTACGTGGAGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp TGTCATCTTCCCCACCGACAGGACCTCCACGGTGAGTaGCTCCAGGATGGGTCGAGAAGCCTGCAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: CHLPHRQDLHGE*LQDGSRSLQAL
Trigger: GAGAGCCTGCAGGCTTCTCGACCCATCCTGGAGCCACTCACCGTGGAGGTCCTGTCGGTGGGGAAGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GCAACACGGGGGAACCTCGAGGGTCCTTGGGGCGAGTaGACTTGTCCTCCCGAGGTTCTTTGGGCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: ATRGNLEGPWGE*TCPPEVLWAGR
Trigger: TCTACCTGCCCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACCCTCGAGGTTCCCCCGTGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CACTGTTGCGCAACACGGGGGAACCTCGAGGGTCCTTaGGGCGAGTGGACTTGTCCTCCCGAGGTTCTTTGG +
Preference number: 6 (lower is better)
Translates to: HCCATRGNLEGP*GEWTCPPEVLW
Trigger: CCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGGACCCTCGAGGTTCCCCCGTGTTGCGCAACAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp AAGTCTAATTCCTGGGGCTTGCGGCGTAAGTCACACTaGTCCCGAGCCAGCAGCCTGCCTCCGTGGCCCACA +
Preference number: 6 (lower is better)
Translates to: KSNSWGLRRKSH*SRASSLPPWPT
Trigger: TGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTGACTTACGCCGCAAGCCCCAGGAATTAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp GGCTCCCACTTGGCCCAAGAGCCGTCCACCCGGTACTaGTTTGGGTTGTGTCTCTCCACGCAGGCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: GSHLAQEPSTRY*FGLCLSTQAPL
Trigger: CAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACCGGGTGGACGGCTCTTGGGCCAAGTGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp CAATGGCCGATGGTCTACATCACAAGCAGAGGCTCCTaGCTGCCCTGGGGAGTCCCGGCAGTCCACTGCTCG +
Preference number: 6 (lower is better)
Translates to: QWPMVYITSRGS*LPWGVPAVHCS
Trigger: CGAGCAGTGGACTGCCGGGACTCCCCAGGGCAGCAAGGAGCCTCTGCTTGTGATGTAGACCATCGGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp GGCTCCCACTTGGCCCAAGAGCCGTCCACCCGGTACTTGTTTGGGTaGTGTCTCTCCACGCAGGCTCCCTTGAGGCAGAACTTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: GSHLAQEPSTRYLFG*CLSTQAPLRQNLPS
Trigger: GGAAGGCAAGTTCTGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACCGGGTGGACGGCTCTTGGGCCAAGTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp AGTCCTCCGTACCCCTCCTGTAGTAGTGGCGGCCATTaGTGTCCGGGTCCCGTCGGATTGGAACGACCACCT +
Preference number: 6 (lower is better)
Translates to: SPPYPSCSSGGH*CPGPVGLERPP
Trigger: AGGTGGTCGTTCCAATCCGACGGGACCCGGACATCAATGGCCGCCACTACTACAGGAGGGGTACGGAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp TCTGCCCAGGGGAAGTGGCGAGTCTGGCACACCATCTaGCCCTTGGCCTTGCCAGTGCACCACAGCTTTGTA +
Preference number: 6 (lower is better)
Translates to: SAQGKWRVWHTI*PLALPVHHSFV
Trigger: TACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GCGCTGCAGGCTGACCAGGGGTTGGCACGGTCAATCTaGATGAGGGTCGGAGACATCATGTGGTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: ALQADQGLARSI*MRVGDIMWLAL
Trigger: CAGAGCCAACCACATGATGTCTCCGACCCTCATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CCACTTGGCCCAAGAGCCGTCCACCCGGTACTTGTTTaGGTTGTGTCTCTCCACGCAGGCTCCCTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: PLGPRAVHPVLV*VVSLHAGSLEA
Trigger: TGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACCGGGTGGACGGCTCTTGGGCCAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp AAGTCACACTGGTCCCGAGCCAGCAGCCTGCCTCCGTaGCCCACACACTTGAGCGGACGCCTCTTAAATCCA +
Preference number: 6 (lower is better)
Translates to: KSHWSRASSLPP*PTHLSGRLLNP
Trigger: TGGATTTAAGAGGCGTCCGCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp GCCTGCCACCCAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTaGGTTGGAAAGGCTGAGAACACTGTTGCGCAACACGGGGGAACC +
Preference number: 6 (lower is better)
Translates to: ACHPARRRSVIWLLY*VGKAENTVAQHGGT
Trigger: GGTTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGGGTGGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp TCACACTGGTCCCGAGCCAGCAGCCTGCCTCCGTGGCCCACACACTaGAGCGGACGCCTCTTAAATCCACGGCCACAGCTTTTAGAACAG +
Preference number: 6 (lower is better)
Translates to: SHWSRASSLPPWPTH*SGRLLNPRPQLLEQ
Trigger: CTGTTCTAAAAGCTGTGGCCGTGGATTTAAGAGGCGTCCGCTCAAGTGTGTGGGCCACGGAGGCAGGCTGCTGGCTCGGGACCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp CAGCGTCGCAGGTCTAGAGAGCTGCCAGTGAGCCTCTaGAGCGGGACACCTAGATACTCAGTAGCAAAGGCG +
Preference number: 6 (lower is better)
Translates to: QRRRSRELPVSL*SGTPRYSVAKA
Trigger: CGCCTTTGCTACTGAGTATCTAGGTGTCCCGCTGCAGAGGCTCACTGGCAGCTCTCTAGACCTGCGACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp AGGGTCTCAAGACGCAGAAGTCTAATTCCTGGGGCTTaGGGCGTAAGTCACACTGGTCCCGAGCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: RVSRRRSLIPGA*GVSHTGPEPAA
Trigger: GGCTGCTGGCTCGGGACCAGTGTGACTTACGCCGCAAGCCCCAGGAATTAGACTTCTGCGTCTTGAGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CCTTGGGGCGAGTGGACTTGTCCTCCCGAGGTTCTTTaGGCAGGTAGAAAGAATAACGCACACGGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: PWGEWTCPPEVL*AGRKNNAHGAV
Trigger: CACCGCCCCGTGTGCGTTATTCTTTCTACCTGCCCAAAGAACCTCGGGAGGACAAGTCCACTCGCCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CAGGGTTCCCCACAGGCTCGCTTCTCCAATGGCCGATaGTCTACATCACAAGCAGAGGCTCCTTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: QGSPQARFSNGR*STSQAEAPCCP
Trigger: AGGGCAGCAAGGAGCCTCTGCTTGTGATGTAGACCATCGGCCATTGGAGAAGCGAGCCTGTGGGGAACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp AAGTTGCGCAGAGTCAGGGCCGCGTTGCCTGTGACCTaGGGCCCAGTGTCACGATCTCCTAAGAGTAGCACC +
Preference number: 6 (lower is better)
Translates to: KLRRVRAALPVT*GPVSRSPKSST
Trigger: GGTGCTACTCTTAGGAGATCGTGACACTGGGCCCAAGGTCACAGGCAACGCGGCCCTGACTCTGCGCAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp CAGGGGAAGTGGCGAGTCTGGCACACCATCTGCCCCTaGGCCTTGCCAGTGCACCACAGCTTTGTACAGTAC +
Preference number: 6 (lower is better)
Translates to: QGKWRVWHTICP*ALPVHHSFVQY
Trigger: GTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp TTGGCCCAAGAGCCGTCCACCCGGTACTTGTTTGGGTaGTGTCTCTCCACGCAGGCTCCCTTGAGGCAGAAC +
Preference number: 6 (lower is better)
Translates to: LAQEPSTRYLFG*CLSTQAPLRQN
Trigger: GTTCTGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTACCGGGTGGACGGCTCTTGGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp CAGGGTCTCAAGACGCAGAAGTCTAATTCCTGGGGCTaGCGGCGTAAGTCACACTGGTCCCGAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: QGLKTQKSNSWG*RRKSHWSRASS
Trigger: GCTGCTGGCTCGGGACCAGTGTGACTTACGCCGCAAGCCCCAGGAATTAGACTTCTGCGTCTTGAGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp GCCCAGGGGAAGTGGCGAGTCTGGCACACCATCTGCCCCTTGGCCTaGCCAGTGCACCACAGCTTTGTACAGTACTGCATATATGGGCAG +
Preference number: 6 (lower is better)
Translates to: AQGKWRVWHTICPLA*PVHHSFVQYCIYGQ
Trigger: CTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp GCCACCCAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTTGGTaGGAAAGGCTGAGAACACTGTTGCGCAACACGGGGGAACCTCGA +
Preference number: 6 (lower is better)
Translates to: ATQRAGGLLSGCSTW*ERLRTLLRNTGEPR
Trigger: TCGAGGTTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp CCTGTGACCTTGGGCCCAGTGTCACGATCTCCTAAGAGTAGCACCTaGACCACCACGATGTTGATAGGGTTGAGGATGCTGGGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: PVTLGPVSRSPKSST*TTTMLIGLRMLGWR
Trigger: CCGCCACCCCAGCATCCTCAACCCTATCAACATCGTGGTGGTCAAGGTGCTACTCTTAGGAGATCGTGACACTGGGCCCAAGGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp CAAGATCGGTATTTCACTCTTACTCCCTCGCAGTATTTTCCACCGTaGGCAGGGGTAGGGTTGCTGCACTGCCTCCGGGCCAGCTGCACG +
Preference number: 6 (lower is better)
Translates to: QDRYFTLTPSQYFPP*AGVGLLHCLRASCT
Trigger: CGTGCAGCTGGCCCGGAGGCAGTGCAGCAACCCTACCCCTGCCAACGGTGGAAAATACTGCGAGGGAGTAAGAGTGAAATACCGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp CACAGAAGTTGCGCAGAGTCAGGGCCGCGTTGCCTGTaGCCTTGGGCCCAGTGTCACGATCTCCTAAGAGTA +
Preference number: 6 (lower is better)
Translates to: HRSCAESGPRCL*PWAQCHDLLRV
Trigger: TACTCTTAGGAGATCGTGACACTGGGCCCAAGGTCACAGGCAACGCGGCCCTGACTCTGCGCAACTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp AGTTGGGCAGGGTTCCCCACAGGCTCGCTTCTCCAATaGCCGATGGTCTACATCACAAGCAGAGGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SWAGFPTGSLLQ*PMVYITSRGSL
Trigger: CAAGGAGCCTCTGCTTGTGATGTAGACCATCGGCCATTGGAGAAGCGAGCCTGTGGGGAACCCTGCCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp CCATCTGCCCAGGGGAAGTGGCGAGTCTGGCACACCATCTGCCCCTaGGCCTTGCCAGTGCACCACAGCTTTGTACAGTACTGCATATAT +
Preference number: 6 (lower is better)
Translates to: PSAQGKWRVWHTICP*ALPVHHSFVQYCIY
Trigger: ATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTTCCCCTGGGCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp CCACTGCAGTGCCAGTGCCACTATAGCGTAGCACACTaGCTTTTACCACCAGGTCCCGCTCTACAGCGGATA +
Preference number: 6 (lower is better)
Translates to: PLQCQCHYSVAH*LLPPGPALQRI
Trigger: TATCCGCTGTAGAGCGGGACCTGGTGGTAAAAGGCAGTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp GGATGGGTCGAGAAGCCTGCAGGCTCTCCACTGCAGTaGCAGTGCCACTATAGCGTAGCACACTGCCTTTTA +
Preference number: 6 (lower is better)
Translates to: GWVEKPAGSPLQ*QCHYSVAHCLL
Trigger: TAAAAGGCAGTGTGCTACGCTATAGTGGCACTGGCACTGCAGTGGAGAGCCTGCAGGCTTCTCGACCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GCCAGTGCACCACAGCTTTGTACAGTACTGCATATATaGGCAGGGCTTAGAGCCCACCCCAAAGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: ASAPQLCTVLHI*AGLRAHPKGQL
Trigger: GAGCTGGCCTTTGGGGTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp TCAGTAATAATGGCAGCGCTGCAGGCTGACCAGGGGTaGGCACGGTCAATCTGGATGAGGGTCGGAGACATC +
Preference number: 6 (lower is better)
Translates to: SVIMAALQADQG*ARSIWMRVGDI
Trigger: GATGTCTCCGACCCTCATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCCATTATTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp TACTTGTTTGGGTTGTGTCTCTCCACGCAGGCTCCCTaGAGGCAGAACTTGCCTTCCCCACAGCTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: YLFGLCLSTQAP*RQNLPSPQLVP
Trigger: TGGCACCAGCTGTGGGGAAGGCAAGTTCTGCCTCAAGGGAGCCTGCGTGGAGAGACACAACCCAAACAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp TATTTCACTCTTACTCCCTCGCAGTATTTTCCACCGTaGGCAGGGGTAGGGTTGCTGCACTGCCTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: YFTLTPSQYFPP*AGVGLLHCLRA
Trigger: GGCCCGGAGGCAGTGCAGCAACCCTACCCCTGCCAACGGTGGAAAATACTGCGAGGGAGTAAGAGTGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp CGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTTGGTaGGAAAGGCTGAGAACACTGTTGCGCAACACGGGG +
Preference number: 6 (lower is better)
Translates to: RAGGLLSGCSTW*ERLRTLLRNTG
Trigger: CCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp ATCCAGGAAGTCAGTAATAATGGCAGCGCTGCAGGCTaGCCAGGGGTTGGCACGGTCAATCTGGATGAGGGT +
Preference number: 6 (lower is better)
Translates to: IQEVSNNGSAAG*PGVGTVNLDEG
Trigger: ACCCTCATCCAGATTGACCGTGCCAACCCCTGGTCAGCCTGCAGCGCTGCCATTATTACTGACTTCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp GCACGGTCAATCTGGATGAGGGTCGGAGACATCATGTaGTTGGCTCTGAGCTTCCCAAACACCTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: ARSIWMRVGDIM*LALSFPNTSSH
Trigger: GTGTGAGGAGGTGTTTGGGAAGCTCAGAGCCAACCACATGATGTCTCCGACCCTCATCCAGATTGACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CCA 72 bp CAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTTaGTTGGAAAGGCTGAGAACACTGTTGCGCAACACG +
Preference number: 6 (lower is better)
Translates to: QRAGGLLSGCST*LERLRTLLRNT
Trigger: CGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp AAGTGGCGAGTCTGGCACACCATCTGCCCCTTGGCCTaGCCAGTGCACCACAGCTTTGTACAGTACTGCATA +
Preference number: 6 (lower is better)
Translates to: KWRVWHTICPLA*PVHHSFVQYCI
Trigger: TATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAAGGGGCAGATGGTGTGCCAGACTCGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp CCAGCGCGCAGGAGGTCTGTTATCTGGCTGCTCTACTaGGTTGGAAAGGCTGAGAACACTGTTGCGCAACAC +
Preference number: 6 (lower is better)
Translates to: PARRRSVIWLLY*VGKAENTVAQH
Trigger: GTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGACCTCCTGCGCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp GTCTGTTATCTGGCTGCTCTACTTGGTTGGAAAGGCTaGGAACACTGTTGCGCAACACGGGGGAACCTCGAG +
Preference number: 6 (lower is better)
Translates to: VCYLAALLGWKG*EHCCATRGNLE
Trigger: CTCGAGGTTCCCCCGTGTTGCGCAACAGTGTTCTCAGCCTTTCCAACCAAGTAGAGCAGCCAGATAACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp TTGGCCTTGCCAGTGCACCACAGCTTTGTACAGTACTaGATATATGGGCAGGGCTTAGAGCCCACCCCAAAG +
Preference number: 6 (lower is better)
Translates to: LALPVHHSFVQY*IYGQGLEPTPK
Trigger: CTTTGGGGTGGGCTCTAAGCCCTGCCCATATATGCAGTACTGTACAAAGCTGTGGTGCACTGGCAAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp AGCTTACACTTGTCACGTGGTGACACGCCTGAGTACTaGGGTACCCATGCCACAGCTAAAGTGAGCCGGTTG +
Preference number: 6 (lower is better)
Translates to: SLHLSRGDTPEY*GTHATAKVSRL
Trigger: CAACCGGCTCACTTTAGCTGTGGCATGGGTACCCAAGTACTCAGGCGTGTCACCACGTGACAAGTGTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS TCA 72 bp GGTCCCGCTCTACAGCGGATACCACAAAGTGCCCATTaGGCAGGTATTTGCCTTGGCTGTTCTTCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: GPALQRIPQSAH*AGICLGCSSKP
Trigger: TGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGAGCGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp TTGGGCCCAGTGTCACGATCTCCTAAGAGTAGCACCTaGACCACCACGATGTTGATAGGGTTGAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: LGPVSRSPKSST*TTTMLIGLRML
Trigger: CAGCATCCTCAACCCTATCAACATCGTGGTGGTCAAGGTGCTACTCTTAGGAGATCGTGACACTGGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp GCTGTGTCCCAGTACTCAGGGTGCTTATCGCTCACTTaGTTCAGCTTTTTCTGCCAGGCACAGAAGTTGCGC +
Preference number: 6 (lower is better)
Translates to: AVSQYSGCLSLT*FSFFCQAQKLR
Trigger: GCGCAACTTCTGTGCCTGGCAGAAAAAGCTGAACAAAGTGAGCGATAAGCACCCTGAGTACTGGGACACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 72 bp AGGTCCCGCTCTACAGCGGATACCACAAAGTGCCCATaGAGCAGGTATTTGCCTTGGCTGTTCTTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: RSRSTADTTKCP*SRYLPWLFFKA
Trigger: GGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGAGCGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS GCA 72 bp CTGGTGAAGAGGATGGCTGTGTCCCAGTACTCAGGGTaGTTATCGCTCACTTTGTTCAGCTTTTTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: LVKRMAVSQYSG*LSLTLFSFFCQ
Trigger: CTGGCAGAAAAAGCTGAACAAAGTGAGCGATAAGCACCCTGAGTACTGGGACACAGCCATCCTCTTCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7
CDS CAA 90 bp CTCTACAGCGGATACCACAAAGTGCCCATTGAGCAGGTATTTGCCTaGGCTGTTCTTCAAAGCCAGGTAGTTGTCATCTCCAATGAGCCC +
Preference number: 6 (lower is better)
Translates to: LYSGYHKVPIEQVFA*AVLQSQVVVISNEP
Trigger: GGGCTCATTGGAGATGACAACTACCTGGCTTTGAAGAACAGCCAAGGCAAATACCTGCTCAATGGGCACTTTGTGGTATCCGCTGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065112.7