RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS14 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059901

Ensembl transcript IDs: ENSMUST00000092486.11, ENSMUST00000120336.2

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCCAGGCCTGAGAAGAACTCTCCCCTGCCCGACCCTGCAGCCATaGAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGC +
Preference number: 1 (lower is better)
Translates to: EPGLRRTLPCPTLQP*SLTSTSIPDPSQVC
Trigger: GCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGAGAGTTCTTCTCAGGCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 90 bp TCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCAGCTaGGTGGATTCTCAAGTCGCTAGCCACCTGACTGGTCTTCTGAGC +
Preference number: 1 (lower is better)
Translates to: STAASILPGPSAQSS*VDSQVASHLTGLLS
Trigger: GCTCAGAAGACCAGTCAGGTGGCTAGCGACTTGAGAATCCACTCAGCTGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 90 bp TGTCAAAGCTGTGTATCCAGGCCTCCTCCTCTGGTGACTTGGGTGTaGCATTGGAGGGTCAGTCTGTTACCTAGAGTCACCAGCAGTGAC +
Preference number: 1 (lower is better)
Translates to: CQSCVSRPPPLVTWV*HWRVSLLPRVTSSD
Trigger: GTCACTGCTGGTGACTCTAGGTAACAGACTGACCCTCCAATGTCACACCCAAGTCACCAGAGGAGGAGGCCTGGATACACAGCTTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 90 bp AAGGTGGATAGACAAGCACCTCTGCCACTTGGCCCTCAAACTGAGTaGGGGTCTAGGCAATTTCCTGAGAGTCTGAGGACCATGGAAGGT +
Preference number: 1 (lower is better)
Translates to: KVDRQAPLPLGPQTE*GSRQFPESLRTMEG
Trigger: ACCTTCCATGGTCCTCAGACTCTCAGGAAATTGCCTAGACCCTCACTCAGTTTGAGGGCCAAGTGGCAGAGGTGCTTGTCTATCCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 90 bp ATCTCTGACAGGCTCCTGCATGGGCTTCAGCCCTGTATGGCCCAGTaGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATA +
Preference number: 1 (lower is better)
Translates to: ISDRLLHGLQPCMAQ*VWEGALLRLEEQII
Trigger: TATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGGCTGAAGCCCATGCAGGAGCCTGTCAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGCTaGACAGGCCTCCCTGGTAGTCAGAAGTCATGGACAAGCAAGAAT +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVYG*TGLPGSQKSWTSKN
Trigger: ATTCTTGCTTGTCCATGACTTCTGACTACCAGGGAGGCCTGTCCAGCCATACACACACACACACACACACACACACACACACACACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR CCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGGGCTTCAGCCCTGTATaGCCCAGTGGGTATGGGAAG +
Preference number: 2 (lower is better)
Translates to: YPNLGSTAASILPGPSAQGFSPV*PSGYGK
Trigger: CTTCCCATACCCACTGGGCCATACAGGGCTGAAGCC...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR TCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGACAAGCAAGAATCTCTaGCAGGCTCCTGCATGGGCT +
Preference number: 2 (lower is better)
Translates to: GVGGACRVPSIPALQSLQTSKNL*QAPAWA
Trigger: AGCCCATGCAGGAGCCTGTCAGAGATTCTTGCTTGT...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR TCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTATGGCCGGCAAAGGTaGACTGATCTCTGCCCGAGA +
Preference number: 2 (lower is better)
Translates to: YPNLGSTAASILPGPSAQYGRQR*TDLCPR
Trigger: TCTCGGGCAGAGATCAGTTCACCTTTGCCGGCCATA...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR CCA 90 bp GGCCAGGGGCTTTCCTTCCTCCAGCGGAGGAAGGTGGATAGACAAGCACCTCTGGTGACATCTTTCCGGTaGTCACCTTTCAGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: GQGLSFLQRRKVDRQAPLVTSFR*SPFRLG
Trigger: ACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCAC...CAGAGGTGCTTGTCTATCCACCTTCCTCCGCTGGAGGAAGGAAAGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR CCA 90 bp GAGTCTGAGGACCATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTGGGACTGAGCCAGGATCCCTaGGACCACAGGCAGAGTGTA +
Preference number: 2 (lower is better)
Translates to: ESEDHGRCSTHLPYPNLGLSQDP*DHRQSV
Trigger: TACACTCTGCCTGTGGTCCCAGGGATCCTGGCTCAG...TCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR CCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGGTCCTGCTTTGTCTTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GVGGACRVPSIPALQSLQVLLCL*CVCVCV
Trigger: CACACACACACACACACACCAAAGACAAAGCAGGAC...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR-3UTR GCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTCTACCTCCTGAGTCCTaGTTTGTCTTTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SHEASPLHPSRTLPKSACLPPES*FVFGVC
Trigger: ACACACACCAAAGACAAAGCAGGACTCAGGAGGTAG...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 72 bp CTGAGAAGAACTCTCCCCTGCCCGACCCTGCAGCCATaGAGCCTCACCTCTACATCCATCCCGGACCCTTCC +
Preference number: 3 (lower is better)
Translates to: LRRTLPCPTLQP*SLTSTSIPDPS
Trigger: GGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGAGAGTTCTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 72 bp GCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCAGCTaGGTGGATTCTCAAGTCGCTAGCCACCTGACTGGT +
Preference number: 3 (lower is better)
Translates to: ASILPGPSAQSS*VDSQVASHLTG
Trigger: ACCAGTCAGGTGGCTAGCGACTTGAGAATCCACTCAGCTGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 72 bp CTGAGGGGGACAGTCTTAGAGGTGACATCTTTCCGGTaGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCC +
Preference number: 3 (lower is better)
Translates to: LRGTVLEVTSFR*SPFRLGLLQAP
Trigger: GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTCTAAGACTGTCCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR GCA 72 bp CTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTaGCTGTGTGCAGCCCTACCTCCTGAGTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LTSTSIPDPSQV*LCAALPPESCF
Trigger: AAAGCAGGACTCAGGAGGTAGGGCTGCACACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR GCA 72 bp CCTACCCTAACCTGGGATCAACAGCAGCTAGCATCCTaGCAGGGCCCTCTGCACAGTCCAGCTGAGTGGATT +
Preference number: 3 (lower is better)
Translates to: PTLTWDQQQLAS*QGPLHSPAEWI
Trigger: AATCCACTCAGCTGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 72 bp AGGCTCCTGCATGGGCTTCAGCCCTGTATGGCCCAGTaGGTATGGGAAGGGGCATTACTGAGACTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RLLHGLQPCMAQ*VWEGALLRLEE
Trigger: TTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGGCTGAAGCCCATGCAGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 72 bp ATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTaGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: MEGALRIFPTLT*DQQQLASCQGP
Trigger: AGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 72 bp AAAAATCAGCATCTCCAGGCCGGTCCACACATGACTTaGCTCAGGGTAGCTCCAGGCACCTGCAGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: KNQHLQAGPHMT*LRVAPGTCRAG
Trigger: TCCTGCTCTGCAGGTGCCTGGAGCTACCCTGAGTCAAGTCATGTGTGGACCGGCCTGGAGATGCTGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR GCA 72 bp GAAGTCATGGACAAGCAAGAATCTCTGACAGGCTCCTaGATGGGCTTCAGCCCTGTATGGCCCAGTGGGTAT +
Preference number: 3 (lower is better)
Translates to: EVMDKQESLTGS*MGFSPVWPSGY
Trigger: ATACCCACTGGGCCATACAGGGCTGAAGCCCATGCAGGAGCCTGTCAGAGATTCTTGCTTGTCCATGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CCA 72 bp CTGCATGGGCTTCAGCCCTGTATGGCCCAGTGGGTATaGGAAGGGGCATTACTGAGACTAGAGGAACAAATC +
Preference number: 3 (lower is better)
Translates to: LHGLQPCMAQWV*EGALLRLEEQI
Trigger: GATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGGCTGAAGCCCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 72 bp GATGTCAAAGCTGTGTATCCAGGCCTCCTCCTCTGGTaGCTTGGGTGTGACATTGGAGGGTCAGTCTGTTAC +
Preference number: 3 (lower is better)
Translates to: DVKAVYPGLLLW*LGCDIGGSVCY
Trigger: GTAACAGACTGACCCTCCAATGTCACACCCAAGTCACCAGAGGAGGAGGCCTGGATACACAGCTTTGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR TCA 72 bp AAACTGAGTGAGGGTCTAGGCAATTTCCTGAGAGTCTaGGGACCATGGAAGGTGCTCTACGCATCTTCCCTA +
Preference number: 3 (lower is better)
Translates to: KLSEGLGNFLRV*GPWKVLYASSL
Trigger: TAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTCTCAGGAAATTGCCTAGACCCTCACTCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR GCA 72 bp CAGAACAAGAGGGCAAATAATTTAAAAGGGAACCTGTaGTACCTCCTGTCCCCTGCGCTTGAGTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: QNKRANNLKGNL*YLLSPALESSE
Trigger: CTCAGAGGACTCAAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTTGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGCCAGGCTCAGGGGGCTaGGAGCCACGCGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GVGGACRVPSIPALQSLQPGSGG*EPRGGG
Trigger: GCCACCTCCGCGTGGCTCGCAGCCCCCTGAGCCTGG...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCGAACCAGGGGCGCCATaGCGCTGCCCAGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTEPGAP*RCPDWS
Trigger: AGACCAGTCTGGGCAGCGTCATGGCGCCCCTGGTTC...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCGCCTCTTTCTCCTGCTaGCCTCGCTCCAGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTASFSC*PRSRGS
Trigger: CGAGCCCCTGGAGCGAGGGCAGCAGGAGAAAGAGGC...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGCCAGGGGCTTTCCTTCCTCCAGCGGAGGAAGGTGGATAGACAAGCACCTCTGGCTCCTGTCCGCCACTaGGCTGGGCAGGGCACACGG +
Preference number: 4 (lower is better)
Translates to: GQGLSFLQRRKVDRQAPLAPVRH*AGQGTR
Trigger: CCGTGTGCCCTGCCCAGCCCAGTGGCGGACAGGAGC...CAGAGGTGCTTGTCTATCCACCTTCCTCCGCTGGAGGAAGGAAAGCCCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGCGGTGCACCATGTGGTaGTCCCTGCGGCGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: YPNLGSTAASILPGPSAQRCTMW*SLRRRQ
Trigger: CTGCCGGCGCCGCAGGGACCACCACATGGTGCACCG...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCCCCGGGCATTCCAGTaGCACCTCCAGTGTACACAC +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTPRAFQ*HLQCTH
Trigger: GTGTGTACACTGGAGGTGTCACTGGAATGCCCGGGG...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGCCAGCCTCTTTCTCCTaGTGCCCTCGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVGGACRVPSIPALQSLQPASFS*CPRSRG
Trigger: GCCCCTGGAGCGAGGGCAGCAGGAGAAAGAGGCTGG...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGTGCAGCCCCTCGATGCTGTAGCTaGCGGGCTTGGCGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: SLTSTSIPDPSQVCLCAAPRCCS*RAWRVA
Trigger: GGCGACACGCCAAGCCCGGCAGCTACAGCATCGAGG...GGCTGCACACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGCCCAGCGACACACCTaGTCCAGGCTGCGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SHEASPLHPSRTLPKSACAQRHT*SRLRAG
Trigger: CCCAGCGCGCAGCCTGGAGCAGGTGTGTCGCTGGGC...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGCTAGGGTCCTGGCGCTaGTGGGAGTGTGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQLGSWR*WECAQR
Trigger: TCGCTGGGCACACTCCCAGCAGCGCCAGGACCCTAG...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGAGAGGCAGCAGGCACTaGACTCCCCGGGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQRGSRH*TPRVCS
Trigger: GCTGCAGACCCGGGGAGTGCAGTGCCTGCTGCCTCT...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCTGTAGCTGCCGGGCTTaGCGTGTCGCCGCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSCSCRA*RVAASA
Trigger: AGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTACA...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCGTGTGGCTAGGGTCCTaGCGCTGCTGGGAGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPVWLGS*RCWECA
Trigger: GGCACACTCCCAGCAGCGCCAGGACCCTAGCCACAC...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGTCCCGAAAGTCCTCCTaGCATTCCACCGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQSRKSS*HSTGAP
Trigger: AGGGGCCCCGGTGGAATGGCAGGAGGACTTTCGGGA...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGTGCAGCCGCTGATGGCCACAGCTaGCCCGGGCATTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SLTSTSIPDPSQVCLCAAADGHS*PGHSSD
Trigger: GTCACTGGAATGCCCGGGGCAGCTGTGGCCATCAGC...GGCTGCACACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGAGGCTGGTGCCTCCATaGCCTGGTTCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQRLVPP*PGSSLD
Trigger: GTCCAGGGAGGAACCAGGGCATGGAGGCACCAGCCT...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCCTGCAGCGAGACCAGTaGAACCTGTGGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPLQRDQ*NLWKAA
Trigger: GGCCGCCTTCCACAGGTTCCACTGGTCTCGCTGCAG...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCGAGCCGCTGCCTGCTTaGAGCCCTTTCCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSEPLPA*SPFPES
Trigger: GGACTCTGGGAAAGGGCTCCAAGCAGGCAGCGGCTC...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTTGTCCGCCACTGGGCTaGGCAGGGCACACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHEASPLHPSRTLPKSACCPPLG*AGHTEA
Trigger: TGCCTCCGTGTGCCCTGCCCAGCCCAGTGGCGGACA...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGGGTGCCTCCATGCCCTaGTTCCTCCCTGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQGASMP*FLPGLS
Trigger: GGACAGTCCAGGGAGGAACCAGGGCATGGAGGCACC...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGATGTCACTGGGGAGGTaGCGGGAAGGCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQMSLGR*REGWCL
Trigger: GAGGCACCAGCCTTCCCGCCACCTCCCCAGTGACAT...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCTCAAACATGGACCCTaGGCACGGGCGGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSLKHGP*ARAASI
Trigger: TATGGAGGCCGCCCGTGCTCAGGGTCCATGTTTGAG...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCTCCAGCAATTCAATCTaGATGTGCCTGGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTSSNSI*MCLAPA
Trigger: GGCGGGTGCCAGGCACATTCAGATTGAATTGCTGGA...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCGGGGTCCATTGGTCCTaGGGCTGTCCTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSGVHWS*GCPWCP
Trigger: AGGACACCAAGGACAGCCTCAGGACCAATGGACCCC...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCCTGTATGGCCCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAATCGCCGCTTCCGCTCTaGGTCACCCAGCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PCMAQWVWEGALLRLEEQSPLPL*VTQPVP
Trigger: GGGGACCGGCTGGGTGACGCAGAGCGGAAGCGGCGA...TTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCCCTGCGCTTGAGTCCTCTGAGCCAGGATCCCTGGGACCACAGGCAGAGTGTAGGCCGTCATGCTCCATaGCAAGCACATGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLRLSPLSQDPWDHRQSVGRHAP*QAHGLS
Trigger: AGACAGGCCATGTGCTTGGCATGGAGCATGACGGCC...TACACTCTGCCTGTGGTCCCAGGGATCCTGGCTCAGAGGACTCAAGCGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCCCTGCGCTTGAGTCCTCTGAGCCAGGATCCCTGGGACCACAGGCAGAGTGTAGCACCACTTGCCTGGTaGACACTCTGTCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: PLRLSPLSQDPWDHRQSVAPLAW*TLCPIQ
Trigger: CTGGATGGGACAGAGTGTGCACCAGGCAAGTGGTGC...TACACTCTGCCTGTGGTCCCAGGGATCCTGGCTCAGAGGACTCAAGCGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCGCATGGCTTTGTGGGTaGCATTGGAGAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTAWLCG*HWREAA
Trigger: TGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGC...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCCCTGCGCTTGAGTCCTCTGAGCCAGGATCCCTGGGACCACAGGCAGAGTGTATCTTTCCACTCCCTCTaGACGGCTTCCCGGCGGTAT +
Preference number: 4 (lower is better)
Translates to: PLRLSPLSQDPWDHRQSVSFHSL*TASRRY
Trigger: ATACCGCCGGGAAGCCGTCCAGAGGGAGTGGAAAGA...TACACTCTGCCTGTGGTCCCAGGGATCCTGGCTCAGAGGACTCAAGCGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCGTATGCTCCCTGCCGTaGAAGCGGACCACCGAGTCA +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSVCSLP*KRTTES
Trigger: TGACTCGGTGGTCCGCTTCCACGGCAGGGAGCATAC...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCAGGCAGTTCTGGGGGCTaGGGCCAGGTGCGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TLGSGARTLLAEVFLVRAGSSGG*GQVRSK
Trigger: CTTCGAGCGCACCTGGCCCCAGCCCCCAGAACTGCC...TGCCCTAACCAGAAATACCTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGGTGGTAAGGCCAGGCTaGCATTGGGGCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: GVGGACRVPSIPALQSLQVVRPG*HWGLRS
Trigger: AGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCAC...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCGTGTACACACACTCCTaGTGCAAGGGTTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPARPCSHEASPLHPSRTVYTHS*CKGCRK
Trigger: CTTCCGACAACCCTTGCAGCAGGAGTGTGTGTACAC...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGCATCATCGCAGCCATTaGCCTGGCCGTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQHHRSH*PGRHAP
Trigger: TGGAGCATGACGGCCAGGGCAATGGCTGCGATGATG...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGTTTCGCTTGGCACACTaGTGGGCTCGGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQFRLAH*WARKSS
Trigger: CGAGGACTTCCGAGCCCAGCAGTGTGCCAAGCGAAA...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTCAGGGCAGCAGGCAGTaGAGCAGAGCTCGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SHEASPLHPSRTLPKSACQGSRQ*SRARSQ
Trigger: TTGGCTCCGAGCTCTGCTCCACTGCCTGCTGCCCTG...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGGAACCAGGATGGCGATaGCTTCAGGCAGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQEPGWR*LQAGVH
Trigger: ATGGACCCCTGCCTGAAGCCATCGCCATCCTGGTTC...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGGGGGAAGAACCAGGATaGCGATGGCTTCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YPNLGSTAASILPGPSAQGEEPG*RWLQAG
Trigger: CCCTGCCTGAAGCCATCGCCATCCTGGTTCTTCCCC...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGCCAGGGGCTTTCCTTCCTCCAGCGGAGGAAGGTGGATAGACAAGCACCTCTGGGTGGTAGCCGGGGATaGTGCAGTAACGGTCCAACA +
Preference number: 4 (lower is better)
Translates to: GQGLSFLQRRKVDRQAPLGGSRG*CSNGPT
Trigger: TGTTGGACCGTTACTGCACCATCCCCGGCTACCACC...CAGAGGTGCTTGTCTATCCACCTTCCTCCGCTGGAGGAAGGAAAGCCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGGCTCCAGGGGCTCGATaGAGTAGTCTGAGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQAPGAR*SSLSCL
Trigger: CAGACAACTCAGACTACTTCATCGAGCCCCTGGAGC...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGGCTGGCTTTGCCGATaGTCTTCCAGGCTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SHEASPLHPSRTLPKSACGWLCR*SSRLVG
Trigger: GCCAACCAGCCTGGAAGATCATCGGCAAAGCCAGCC...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGCAATCTGAATGTGCCTaGCACCCGCCGGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: YPNLGSTAASILPGPSAQQSECA*HPPGSA
Trigger: TGCAGATCCCGGCGGGTGCCAGGCACATTCAGATTG...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCAAGGCCTTGGCTGGCATaGCTTTGTGGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LTWDQQQLASCQGPLHSPRPWLA*LCGCHW
Trigger: CCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCT...TGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGTTCACAGTCCTACAGTaGGAATTGTCCCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQFTVLQ*ELSPPQ
Trigger: CTGCGGTGGGGACAATTCTCACTGTAGGACTGTGAA...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp AGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGTGCAGCCACAGGGCTCCATTGTTaGGATCCTGTCCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLTSTSIPDPSQVCLCAATGLHC*DPVLRS
Trigger: ACTCCTGAGGACAGGATCTCAACAATGGAGCCCTGT...GGCTGCACACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp GAGGGGGACAGTCTTAGAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGCTGTTTGAGAGCCGCTaGCTGCTTGGAGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EGDSLRGDIFPVVTFQAGLFESR*LLGALS
Trigger: GGAAAGGGCTCCAAGCAGGCAGCGGCTCTCAAACAG...CCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTCTAAGACTGTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCCTGTATGGCCCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAACCATGTGGTGGTCCCTaGGGCGCCGGCAGCCATATT +
Preference number: 4 (lower is better)
Translates to: PCMAQWVWEGALLRLEEQPCGGP*GAGSHI
Trigger: AATATGGCTGCCGGCGCCGCAGGGACCACCACATGG...TTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTTGTTAACTCCTGGATGTTCACACAGGTGCCGGTaGACCATGTGGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPSLLTPGCSHRCR*TMWWSL
Trigger: CAGGGACCACCACATGGTGCACCGGCACCTGTGTGA...ACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCATTATGGTCACACAGGTaGCGGTGCACCATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTWDQQQLASCQGPLHSPLWSHR*RCTMWW
Trigger: CCACCACATGGTGCACCGGCACCTGTGTGACCATAA...TGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCACATACCACCTGCCTTTaGTGGATGCCTTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LTWDQQQLASCQGPLHSPHTTCL*WMPSPQ
Trigger: CTGCGGAGAAGGCATCCAGCAAAGGCAGGTGGTATG...TGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp GAGTCTGAGGACCATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTGGGACACAGGCAGGCAGGCTaGAGATCTGCACCATGTCCG +
Preference number: 4 (lower is better)
Translates to: ESEDHGRCSTHLPYPNLGHRQAG*RSAPCP
Trigger: CGGACATGGTGCAGATCTGCAGCCTGCCTGCCTGTG...TCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGGACAAGAAGCGTCCCTaGAAATCTGTGCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GVGGACRVPSIPALQSLQDKKRP*KSVLQG
Trigger: GCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTC...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGAGGCAATCGTAGGATaGGAGGTAGCGGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SHEASPLHPSRTLPKSACEAIVG*EVAAEL
Trigger: GAGCTCAGCCGCTACCTCCCATCCTACGATTGCCTC...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGTTGGGCCTCTTTTTATaGTCACACAGGTGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQLGLFL*SHRCRC
Trigger: GCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAA...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCACTTTGTGGGTGCCATTaGAGAGAGGCAGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LTWDQQQLASCQGPLHSPLCGCH*REAAGT
Trigger: AGTGCCTGCTGCCTCTCTCCAATGGCACCCACAAAG...TGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCAGTCCCTGATCTCCCTCTCCTCCCTCCAGGGTGGCCTTaGGTGCTGGCAAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TLLAEVFLVRAVPDLPLLPPGWP*VLARDS
Trigger: GGAGTCTCTTGCCAGCACCCAAGGCCACCCTGGAGG...GAGGAGAGGGAGATCAGGGACTGCCCTAACCAGAAATACCTCAGCTAGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGCCAGGGGCTTTCCTTCCTCCAGCGGAGGAAGGTGGATAGACAAGCACCTCTGATCTTCCAGGCTGGTTaGCCCCCTTGTAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: GQGLSFLQRRKVDRQAPLIFQAG*PPCRLH
Trigger: GTGAAGTCTACAAGGGGGCCAACCAGCCTGGAAGAT...CAGAGGTGCTTGTCTATCCACCTTCCTCCGCTGGAGGAAGGAAAGCCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCAGTCCCTGATCTCCCTCTCCTCAGGTGGCGGGAAGGCTaGTGCCTCCATGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLAEVFLVRAVPDLPLLRWREG*CLHALV
Trigger: AACCAGGGCATGGAGGCACCAGCCTTCCCGCCACCT...GAGGAGAGGGAGATCAGGGACTGCCCTAACCAGAAATACCTCAGCTAGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGCTCGATGAAGTAGTCTaGGTTGTCTGTGCGGATGAG +
Preference number: 4 (lower is better)
Translates to: GVGGACRVPSIPALQSLQLDEVV*VVCADE
Trigger: CTCATCCGCACAGACAACTCAGACTACTTCATCGAG...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCACACGACCGAGAACATaGGCCAAAATTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSTRPRT*AKIGPG
Trigger: TCCTGGACCAATTTTGGCTCATGTTCTCGGTCGTGT...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTTGTTAACTCCTGGATGTCGGCAGACTGGCAAATaGGCTCGCACTTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPSLLTPGCRQTGK*ARTSGH
Trigger: ATGCCCAGAAGTGCGAGCTCATTTGCCAGTCTGCCG...ACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GAGGGGGACAGTCTTAGAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGAGGGAGACCAGCTCTTaGGAGCCCATTCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: EGDSLRGDIFPVVTFQAGRETSS*EPIRRC
Trigger: ACACCTACGAATGGGCTCTCAAGAGCTGGTCTCCCT...CCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTCTAAGACTGTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AAGAGGGCAAATAATTTAAAAGGGAACCTGTGCTACCTCCTGTCCCCTGCGCTTTTCCACCGGGGCCCCTaGGGCCACCAACCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: KRANNLKGNLCYLLSPALFHRGP*GHQPPV
Trigger: AACCGGAGGTTGGTGGCCCCAGGGGCCCCGGTGGAA...AAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGAACAAATCATATAAAAACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGGGTCCTGGCGCTGCTaGGAGTGTGCCCAGCGACAC +
Preference number: 4 (lower is better)
Translates to: GTNHIKTLGSGARTLLAEGSWRC*ECAQRH
Trigger: GTGTCGCTGGGCACACTCCCAGCAGCGCCAGGACCC...CTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGTTTTTATATGATTTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGGAGAAGCCATCCTCGTaGTTGAGGGCACAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YPNLGSTAASILPGPSAQEKPSS*LRAQLL
Trigger: AAGAAGCTGTGCCCTCAACCACGAGGATGGCTTCTC...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCCTGTATGGCCCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAACAGGAGTCAGGGGCCTaGATTGGGGTTCCCGGTATC +
Preference number: 4 (lower is better)
Translates to: PCMAQWVWEGALLRLEEQQESGA*IGVPGI
Trigger: GATACCGGGAACCCCAATCCAGGCCCCTGACTCCTG...TTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp AAGAGGGCAAATAATTTAAAAGGGAACCTGTGCTACCTCCTGTCCCCTGCGCTTGCGCTGCTGGGAGTGTaGCCAGCGACACACCTGCTC +
Preference number: 4 (lower is better)
Translates to: KRANNLKGNLCYLLSPALALLGV*PATHLL
Trigger: GAGCAGGTGTGTCGCTGGGCACACTCCCAGCAGCGC...AAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp GAGTCTGAGGACCATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTGGGAAAGGATCGCGATAGCTaGAGCGTGTCCCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: ESEDHGRCSTHLPYPNLGKDRDS*SVSHRG
Trigger: TCCACGATGGGACACGCTGCAGCTATCGCGATCCTT...TCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGAACATGAGCCAAAATTaGTCCAGGAACTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQNMSQN*SRNSSL
Trigger: GAGGCTGGAGTTCCTGGACCAATTTTGGCTCATGTT...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GAGTCTGAGGACCATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTGGGAAGTAGGAGTTTCGCTTaGCACACTGCTGGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: ESEDHGRCSTHLPYPNLGSRSFA*HTAGLG
Trigger: TCCGAGCCCAGCAGTGTGCCAAGCGAAACTCCTACT...TCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCATTGGTCACAGGGTCCTaGACCTCCGCCTTCACTGTA +
Preference number: 4 (lower is better)
Translates to: TLGSGARTLLAEVFLVRALVTGS*TSAFTV
Trigger: TACAGTGAAGGCGGAGGTCCAGGACCCTGTGACCAA...TGCCCTAACCAGAAATACCTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCCAAACAGATAAGTTTGCTCTGGTaGCTTCCAGATACAATGGCC +
Preference number: 4 (lower is better)
Translates to: PLLPQPCHGSKERHSPKQISLLW*LPDTMA
Trigger: GGCCATTGTATCTGGAAGTCACCAGAGCAAACTTAT...CTGTTTGGGGCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTTGTTAACTCCTGGATGTCATTATTACTCCCGATaGGGGGCAGCAGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPSLLTPGCHYYSR*GAAGPH
Trigger: ATGAGGACCTGCTGCCCCTCATCGGGAGTAATAATG...ACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGCAGCGTGTCCCATCGTaGACTACTTGGTTCATAAAT +
Preference number: 4 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQQRVPS*TTWFIN
Trigger: ATTTATGAACCAAGTAGTCCACGATGGGACACGCTG...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCATGTCATCCGTCTTCATaGATCCCACCTCCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: TLGSGARTLLAEVFLVRACHPSS*IPPPCR
Trigger: GCGACAAGGAGGTGGGATCCATGAAGACGGATGACA...TGCCCTAACCAGAAATACCTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCCTGTATGGCCCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAAGGCCAGGCTGGCATTaGGGCCTGAGGTCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: PCMAQWVWEGALLRLEEQRPGWH*GLRSSL
Trigger: TAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCT...TTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CAA 72 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTaGTTAACTCCTGGATGTCAAAGCTGTGTATCCAGG +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPS*LTPGCQSCVSR
Trigger: CCTGGATACACAGCTTTGACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GGAACAAATCATATAAAAACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGATCCATCACAGTTGCTaGTGGCCACAGCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GTNHIKTLGSGARTLLAEIHHSC*WPQLPR
Trigger: CCGGGGCAGCTGTGGCCATCAGCAACTGTGATGGAT...CTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGTTTTTATATGATTTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp AAGAGGGCAAATAATTTAAAAGGGAACCTGTGCTACCTCCTGTCCCCTGCGCTTGGGGTGACCGGATACTaGGTCACTGGGGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: KRANNLKGNLCYLLSPALGVTGY*VTGEIL
Trigger: CAGGATCTCCCCAGTGACTCAGTATCCGGTCACCCC...AAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTTGTTAACTCCTGGATGTTACACACACTCCTGCTaGAAGGGTTGTCGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPSLLTPGCYTHSC*KGCRKS
Trigger: ACTCTTCCGACAACCCTTGCAGCAGGAGTGTGTGTA...ACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AAGAGGGCAAATAATTTAAAAGGGAACCTGTGCTACCTCCTGTCCCCTGCGCTTCGGCGGTATACCACATaGGTCCTCCCACCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KRANNLKGNLCYLLSPALRRYTT*VLPPAS
Trigger: AGAGGCTGGTGGGAGGACCCATGTGGTATACCGCCG...AAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GTCCTGCTTTGTCTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACCTAGGCAGGCCTTaGCTGGCATGGCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VLLCLWCVCVCVCVCVCVYLGRP*LAWLCG
Trigger: CCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTA...CACACACACACACACACACACACACACACACACACACCAAAGACAAAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp AAGAGGGCAAATAATTTAAAAGGGAACCTGTGCTACCTCCTGTCCCCTGCGCTTGGTGGCCTTGGGTGCTaGCAAGAGACTCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KRANNLKGNLCYLLSPALGGLGC*QETPRS
Trigger: ACTCCTGGGAGTCTCTTGCCAGCACCCAAGGCCACC...AAGCGCAGGGGACAGGAGGTAGCACAGGTTCCCTTTTAAATTATTTGCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GTCCTGCTTTGTCTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGGATACTGAGTCACTaGGGAGATCCTGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VLLCLWCVCVCVCVCVCVRILSH*GDPVRH
Trigger: GTGGCGGACAGGATCTCCCCAGTGACTCAGTATCCG...CACACACACACACACACACACACACACACACACACACCAAAGACAAAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
3UTR CAA 72 bp TGTGTGCAGCCCTACCTCCTGAGTCCTGCTTTGTCTTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CVQPYLLSPALS*VCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACCAAAGACAAAGCAGGACTCAGGAGGTAGGGCTGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GTCCTGCTTTGTCTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCTGCAGCCTCAAGTaGAGCAGCTTCCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: VLLCLWCVCVCVCVCVCVGCSLK*SSFPKT
Trigger: TGTCTTTGGGAAGCTGCTTCACTTGAGGCTGCAGCC...CACACACACACACACACACACACACACACACACACACCAAAGACAAAGCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GGAACAAATCATATAAAAACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGCAGGTCCTCATGGATaGCGTACTTGTAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GTNHIKTLGSGARTLLAEAGPHG*RTCRPG
Trigger: GCCTGGCCTACAAGTACGTCATCCATGAGGACCTGC...CTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGTTTTTATATGATTTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCTGATCTCCCTCTCCTCCCCCAACCCTGTCACGGGAGTAAAGAGCGTCACAGCCCATCGTGGACTACTTaGTTCATAAATACCACATCT +
Preference number: 4 (lower is better)
Translates to: PDLPLLPQPCHGSKERHSPSWTT*FINTTS
Trigger: AGATGTGGTATTTATGAACCAAGTAGTCCACGATGG...GCTGTGACGCTCTTTACTCCCGTGACAGGGTTGGGGGAGGAGAGGGAGATCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CACCGATCCTGGTCTAACCAGGGACCAAGCCCCAGCTTGTTAACTCCTGGATGTCCATATTTAGTGAACTaGATTCCTCCTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: HRSWSNQGPSPSLLTPGCPYLVN*IPPPQA
Trigger: GGCCTGTGGAGGAGGAATCCAGTTCACTAAATATGG...ACATCCAGGAGTTAACAAGCTGGGGCTTGGTCCCTGGTTAGACCAGGATCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GGAACAAATCATATAAAAACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGTCACATCCTCCAGGGTaGCCTTGGGTGCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GTNHIKTLGSGARTLLAESHPPG*PWVLAR
Trigger: TCTTGCCAGCACCCAAGGCCACCCTGGAGGATGTGA...CTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGTTTTTATATGATTTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR TCA 90 bp GTCCTGCTTTGTCTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGCTCAAAGGTCCTaGAAGCTAAGCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VLLCLWCVCVCVCVCVCVRAQRS*KLSRCG
Trigger: ACCACACCTGCTTAGCTTTCAGGACCTTTGAGCCCT...CACACACACACACACACACACACACACACACACACACCAAAGACAAAGCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATATAAAACTCCAGGCTGCGCGCTaGGTTCCCTCGCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: PVGMGRGITETRGTNHIKLQAAR*VPSLNQ
Trigger: CTGATTGAGCGAGGGAACCCAGCGCGCAGCCTGGAG...TTTTATATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp GAGTCTGAGGACCATGGAAGGTGCTCTACGCATCTTCCCTACCCTAACCTGGGAGACTTCCAGATACAATaGCCTTTGAAGCACCACTTG +
Preference number: 4 (lower is better)
Translates to: ESEDHGRCSTHLPYPNLGDFQIQ*PLKHHL
Trigger: CAAGTGGTGCTTCAAAGGCCATTGTATCTGGAAGTC...TCCCAGGTTAGGGTAGGGAAGATGCGTAGAGCACCTTCCATGGTCCTCAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp ACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCAGTCCCTGATCTCCCTCTCCTCTTCACTGTAGAGTTCTaGAGATCTCCTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TLLAEVFLVRAVPDLPLLFTVEF*RSPPQA
Trigger: TGCCTGTGGAGGAGATCTCCAGAACTCTACAGTGAA...GAGGAGAGGGAGATCAGGGACTGCCCTAACCAGAAATACCTCAGCTAGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR GCA 90 bp CCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATATAAAACTCCTCCACAGGCCTTaGTGCAGGGAGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PVGMGRGITETRGTNHIKLLHRP*CRETSS
Trigger: AGAGCTGGTCTCCCTGCAGCAAGGCCTGTGGAGGAG...TTTTATATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CCA 90 bp CCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATATAAAAGAAGCACCACTTGCCTaGTGCACACTCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: PVGMGRGITETRGTNHIKEAPLA*CTLCPI
Trigger: GATGGGACAGAGTGTGCACCAGGCAAGTGGTGCTTC...TTTTATATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS GCA 90 bp CTCGATGCTGTAGCTGCCGGGCTTGGCGTGTCGCCGCTTCCGCTCTaGGTCACCCAGCCGGTCCCCCACCAGATCCAGCACGTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LDAVAAGLGVSPLPL*VTQPVPHQIQHVGK
Trigger: CTTCCCAACGTGCTGGATCTGGTGGGGGACCGGCTGGGTGACGCAGAGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTACAGCATCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp AGTCATCCACCGCCAGCAGAACCTCGATGCTGTAGCTGCCGGGCTTaGCGTGTCGCCGCTTCCGCTCTGCGTCACCCAGCCGGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: SHPPPAEPRCCSCRA*RVAASALRHPAGPP
Trigger: TGGGGGACCGGCTGGGTGACGCAGAGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTACAGCATCGAGGTTCTGCTGGCGGTGGATGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GCAGGTAGCAGAGCACTGGGACCAGGCTCCTGTCCGCCACTGGGCTaGGCAGGGCACACGGAGGCATGGCTTCTTGGCCTCTGGCCGGTT +
Preference number: 5 (lower is better)
Translates to: AGSRALGPGSCPPLG*AGHTEAWLLGLWPV
Trigger: AACCGGCCAGAGGCCAAGAAGCCATGCCTCCGTGTGCCCTGCCCAGCCCAGTGGCGGACAGGAGCCTGGTCCCAGTGCTCTGCTACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp TCTCCGCAGGTAGCAGAGCACTGGGACCAGGCTCCTGTCCGCCACTaGGCTGGGCAGGGCACACGGAGGCATGGCTTCTTGGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SPQVAEHWDQAPVRH*AGQGTRRHGFLASG
Trigger: GCCAGAGGCCAAGAAGCCATGCCTCCGTGTGCCCTGCCCAGCCCAGTGGCGGACAGGAGCCTGGTCCCAGTGCTCTGCTACCTGCGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp GTCGTGATGTTCAGTGTGGCTAGGGTCCTGGCGCTGCTGGGAGTGTaGCCAGCGACACACCTGCTCCAGGCTGCGCGCTGGGTTCCCTCG +
Preference number: 5 (lower is better)
Translates to: VVMFSVARVLALLGV*PATHLLQAARWVPS
Trigger: CGAGGGAACCCAGCGCGCAGCCTGGAGCAGGTGTGTCGCTGGGCACACTCCCAGCAGCGCCAGGACCCTAGCCACACTGAACATCACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp CATAGTCGTGAAGTTTCCCAGAGAGGCGCAGGTCTGGGGTCTGACTaGCGGCGGCGGCACAGAGCGCGCAGTACCAGGGCAGCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: HSREVSQRGAGLGSD*RRRHRARSTRAAGS
Trigger: ACTGCCTGCTGCCCTGGTACTGCGCGCTCTGTGCCGCCGCCGGCAGTCAGACCCCAGACCTGCGCCTCTCTGGGAAACTTCACGACTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp GCTGGCATGGCTTTGTGGGTGCCATTGGAGAGAGGCAGCAGGCACTaGACTCCCCGGGTCTGCAGCCCCAGCTTCCCGCAGCTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: AGMALWVPLERGSRH*TPRVCSPSFPQLRL
Trigger: TAGCCGAAGCTGCGGGAAGCTGGGGCTGCAGACCCGGGGAGTGCAGTGCCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GCCTCTGGCCGGTTACCTAGGCAGGCCTTGGCTGGCATGGCTTTGTaGGTGCCATTGGAGAGAGGCAGCAGGCACTGCACTCCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: ASGRLPRQALAGMAL*VPLERGSRHCTPRV
Trigger: GACCCGGGGAGTGCAGTGCCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTAACCGGCCAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp CACCGTCACAACATAGTCGTGAAGTTTCCCAGAGAGGCGCAGGTCTaGGGTCTGACTGCCGGCGGCGGCACAGAGCGCGCAGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: HRHNIVVKFPREAQV*GLTAGGGTERAVPG
Trigger: CCCTGGTACTGCGCGCTCTGTGCCGCCGCCGGCAGTCAGACCCCAGACCTGCGCCTCTCTGGGAAACTTCACGACTATGTTGTGACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp CGGAGGTGGCTCCGTGGTGAGGGAGCTGCGGGGGCAGACACCACATaGGACAAGAAGCGTCCCTGGAAATCTGTGCTGCAAGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: RRWLRGEGAAGADTT*DKKRPWKSVLQGTV
Trigger: GACGGTGCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGGTGTCTGCCCCCGCAGCTCCCTCACCACGGAGCCACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp TCGGAAGAGTTCCCGAAAGTCCTCCTGCCATTCCACCGGGGCCCCTaGGGCCACCAACCTCCGGTTCGGCTGCAGCCTCAAGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SEEFPKVLLPFHRGP*GHQPPVRLQPQVKQ
Trigger: CTGCTTCACTTGAGGCTGCAGCCGAACCGGAGGTTGGTGGCCCCAGGGGCCCCGGTGGAATGGCAGGAGGACTTTCGGGAACTCTTCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GGCTCTTTCCACTCCCTCTGGACGGCTTCCCGGCGGTATACCACATaGGTCCTCCCACCAGCCTCTTTCTCCTGCTGCCCTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GSFHSLWTASRRYTT*VLPPASFSCCPRSR
Trigger: CCTGGAGCGAGGGCAGCAGGAGAAAGAGGCTGGTGGGAGGACCCATGTGGTATACCGCCGGGAAGCCGTCCAGAGGGAGTGGAAAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GGAGGCATGGCTTCTTGGCCTCTGGCCGGTTACCTAGGCAGGCCTTaGCTGGCATGGCTTTGTGGGTGCCATTGGAGAGAGGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GGMASWPLAGYLGRP*LAWLCGCHWREAAG
Trigger: GCCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTAACCGGCCAGAGGCCAAGAAGCCATGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 90 bp CTCCTCCACAGGCAGGCAGGCTGCAGATCTGCACCATGTCCGGCTTaGCCCCTTCGCATGGCCCGAGGGCACTGGAAGTGTTCCTGCATA +
Preference number: 5 (lower is better)
Translates to: LLHRQAGCRSAPCPA*PLRMARGHWKCSCI
Trigger: TATGCAGGAACACTTCCAGTGCCCTCGGGCCATGCGAAGGGGTCAAGCCGGACATGGTGCAGATCTGCAGCCTGCCTGCCTGTGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp GCTGGGCTCGGAAGTCCTCGTAGGGCCCAGGACAGTCCTCACTGTTaGAGATCTGGTACTCAAACATGGACCCTGAGCACGGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: AGLGSPRRAQDSPHC*RSGTQTWTLSTGGL
Trigger: GAGGCCGCCCGTGCTCAGGGTCCATGTTTGAGTACCAGATCTGCAACAGTGAGGACTGTCCTGGGCCCTACGAGGACTTCCGAGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp CAACGCCGTCGGATAGGCTTGGGCCTCTTTTTATGGTCACACAGGTaGCGGTGCACCATGTGGTGGTCCCTGCGGCGCCGGCAGCCATAT +
Preference number: 5 (lower is better)
Translates to: QRRRIGLGLFLWSHR*RCTMWWSLRRRQPY
Trigger: ATATGGCTGCCGGCGCCGCAGGGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACGGCGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp TCCGCTCTGCGTCACCCAGCCGGTCCCCCACCAGATCCAGCACGTTaGGAAGGTCGCCAAGGCCAAAGGCTTCGTTGTGAAGGTCACCAT +
Preference number: 5 (lower is better)
Translates to: SALRHPAGPPPDPAR*EGRQGQRLRCEGHH
Trigger: ATGGTGACCTTCACAACGAAGCCTTTGGCCTTGGCGACCTTCCCAACGTGCTGGATCTGGTGGGGGACCGGCTGGGTGACGCAGAGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GAGTGCTGGTTGCAACGCCGTCGGATAGGCTTGGGCCTCTTTTTATaGTCACACAGGTGCCGGTGCACCATGTGGTGGTCCCTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: ECWLQRRRIGLGLFL*SHRCRCTMWWSLRR
Trigger: GCGCCGCAGGGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GCTTCTTGGCCTCTGGCCGGTTACCTAGGCAGGCCTTGGCTGGCATaGCTTTGTGGGTGCCATTGGAGAGAGGCAGCAGGCACTGCACTC +
Preference number: 5 (lower is better)
Translates to: ASWPLAGYLGRPWLA*LCGCHWREAAGTAL
Trigger: GAGTGCAGTGCCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTAACCGGCCAGAGGCCAAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp TCATGTCACTGGGGAGGTGGCGGGAAGGCTGGTGCCTCCATGCCCTaGTTCCTCCCTGGACTGTCCTTGACCCTCAGAGGTTGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SCHWGGGGKAGASMP*FLPGLSLTLRGWHS
Trigger: GCTATGCCAACCTCTGAGGGTCAAGGACAGTCCAGGGAGGAACCAGGGCATGGAGGCACCAGCCTTCCCGCCACCTCCCCAGTGACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp TCCCCTGCCCGACCCTGCAGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTGCACCATAGCTGCTaGCAGGGCTCAAAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: SPARPCSHEASPLHPSRTLHHSC*QGSKVL
Trigger: CAGGACCTTTGAGCCCTGCAAGCAGCTATGGTGCAG...GGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCTGCAGGGTCGGGCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCGGACACGAGTGCTGGTaGCAACGCCGTCGGATAGGC +
Preference number: 5 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPGHECW*QRRRIG
Trigger: GCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCC...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCTCCTCCAGGGTGGCCTaGGGTGCTGGCAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPSSRVA*GAGKRL
Trigger: GAGTCTCTTGCCAGCACCCAAGGCCACCCTGGAGGA...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS TCA 90 bp GAAGAACCAGGATGGCGATGGCTTCAGGCAGGGGTCCATTGGTCCTaGGGCTGTCCTTGGTGTCCTCCGCTTCGTGCTCCCACTCTAGGC +
Preference number: 5 (lower is better)
Translates to: EEPGWRWLQAGVHWS*GCPWCPPLRAPTLG
Trigger: GCCTAGAGTGGGAGCACGAAGCGGAGGACACCAAGGACAGCCTCAGGACCAATGGACCCCTGCCTGAAGCCATCGCCATCCTGGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp GCGGATGAGGCCGGCCAATCCATCACAGTTGCTGATGGCCACAGCTaGCCCGGGCATTCCAGTGACACCTCCAGTGTACACACACTCCTG +
Preference number: 5 (lower is better)
Translates to: ADEAGQSITVADGHS*PGHSSDTSSVHTLL
Trigger: CAGGAGTGTGTGTACACTGGAGGTGTCACTGGAATGCCCGGGGCAGCTGTGGCCATCAGCAACTGTGATGGATTGGCCGGCCTCATCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GGGTGGCCTTGGGTGCTGGCAAGAGACTCCCAGGAGTGGAGAAGGTaGGTGGTAAGGCCAGGCTGGCATTGGGGCCTGAGGTCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GWPWVLARDSQEWRR*VVRPGWHWGLRSSL
Trigger: TAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCACCTTCTCCACTCCTGGGAGTCTCTTGCCAGCACCCAAGGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCTCATCATCGCAGCCATaGCCCTGGCCGTCATGCTCC +
Preference number: 5 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPSSSQP*PWPSCS
Trigger: GGAGCATGACGGCCAGGGCAATGGCTGCGATGATGA...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTCGGCTGAGCTCCAGCTaGCTGCAGCGAGACCAGTGG +
Preference number: 5 (lower is better)
Translates to: SHEASPLHPSRTLPKSACRLSSS*LQRDQW
Trigger: CCACTGGTCTCGCTGCAGCAAGCTGGAGCTCAGCCG...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGAGCGGCGGCCCCTTCTaGGTCTTGCAGAAGTATGGG +
Preference number: 5 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQSGGPF*VLQKYG
Trigger: CCCATACTTCTGCAAGACCAAGAAGGGGCCGCCGCT...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp GGCCAGGGGCTTTCCTTCCTCCAGCGGAGGAAGGTGGATAGACAAGCACCTCTGTCAGGCAGGGGTCCATaGGTCCTGAGGCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GQGLSFLQRRKVDRQAPLSGRGP*VLRLSL
Trigger: CAAGGACAGCCTCAGGACCAATGGACCCCTGCCTGA...CAGAGGTGCTTGTCTATCCACCTTCCTCCGCTGGAGGAAGGAAAGCCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS GCA 90 bp CGTCGGATAGGCTTGGGCCTCTTTTTATGGTCACACAGGTGCCGGTaGACCATGTGGTGGTCCCTGCGGCGCCGGCAGCCATATTTAGTG +
Preference number: 5 (lower is better)
Translates to: RRIGLGLFLWSHRCR*TMWWSLRRRQPYLV
Trigger: CACTAAATATGGCTGCCGGCGCCGCAGGGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp AGGGCCCAGGACAGTCCTCACTGTTGCAGATCTGGTACTCAAACATaGACCCTGAGCACGGGCGGCCTCCATAGGCTGGAGGAGGGTTGT +
Preference number: 5 (lower is better)
Translates to: RAQDSPHCCRSGTQT*TLSTGGLHRLEEGC
Trigger: ACAACCCTCCTCCAGCCTATGGAGGCCGCCCGTGCTCAGGGTCCATGTTTGAGTACCAGATCTGCAACAGTGAGGACTGTCCTGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp AGCCATGAAGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTCGGAGGCATGGCTTCTaGGCCTCTGGCCGGTTACCT +
Preference number: 5 (lower is better)
Translates to: SHEASPLHPSRTLPKSACRRHGF*ASGRLP
Trigger: AGGTAACCGGCCAGAGGCCAAGAAGCCATGCCTCCG...ACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCTTCATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp AGCCTCACCTCTACATCCATCCCGGACCCTTCCCAAGTCTGCCTGTGTGCAGCCAAGGCCAGGCTGGCATaGGGGCCTGAGGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SLTSTSIPDPSQVCLCAAKARLA*GPEVFF
Trigger: AAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTT...GGCTGCACACAGGCAGACTTGGGAAGGGTCCGGGATGGATGTAGAGGTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp GAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGTCTCCTGCAAGCCCCCGGTTGGCATAGCTGTTaGGGTCCAGTCCTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: EVTSFRWSPFRLGLLQAPGWHSC*GPVLRW
Trigger: CCACCTCAGGACTGGACCCAAACAGCTATGCCAACC...GGGGGCTTGCAGGAGACCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGCTCCCTGGACTGTCCTaGACCCTCAGAGGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQLPGLS*TLRGWH
Trigger: ATGCCAACCTCTGAGGGTCAAGGACAGTCCAGGGAG...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS TCA 90 bp AGGACAGTCCTCACTGTTGCAGATCTGGTACTCAAACATGGACCCTaGGCACGGGCGGCCTCCATAGGCTGGAGGAGGGTTGTCGCAGCT +
Preference number: 5 (lower is better)
Translates to: RTVLTVADLVLKHGP*ARAASIGWRRVVAA
Trigger: AGCTGCGACAACCCTCCTCCAGCCTATGGAGGCCGCCCGTGCTCAGGGTCCATGTTTGAGTACCAGATCTGCAACAGTGAGGACTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 90 bp CATTCGGCAGAAGACGGATCTGTCTCGCACACAGGGCTCCATTGTTaGGATCCTGTCCTCAGGAGTCAGGGGCCTGGATTGGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: HSAEDGSVSHTGLHC*DPVLRSQGPGLGFP
Trigger: CGGGAACCCCAATCCAGGCCCCTGACTCCTGAGGACAGGATCTCAACAATGGAGCCCTGTGTGCGAGACAGATCCGTCTTCTGCCGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp GCTGCCCCGGGCATTCCAGTGACACCTCCAGTGTACACACACTCCTaGTGCAAGGGTTGTCGGAAGAGTTCCCGAAAGTCCTCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: AAPGIPVTPPVYTHS*CKGCRKSSRKSSCH
Trigger: ATGGCAGGAGGACTTTCGGGAACTCTTCCGACAACCCTTGCAGCAGGAGTGTGTGTACACTGGAGGTGTCACTGGAATGCCCGGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 90 bp CTCTTTCTCCTGCTGCCCTCGCTCCAGGGGCTCGATGAAGTAGTCTaGGTTGTCTGTGCGGATGAGGCCGGCCAATCCATCACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LFLLLPSLQGLDEVV*VVCADEAGQSITVA
Trigger: AGCAACTGTGATGGATTGGCCGGCCTCATCCGCACAGACAACTCAGACTACTTCATCGAGCCCCTGGAGCGAGGGCAGCAGGAGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp TGGGTGGTAAGGCCAGGCTGGCATTGGGGCCTGAGGTCTTCTTTATaGAAGACTCACAGCATAGACGGTGGTAGCCGGGGATGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: WVVRPGWHWGLRSSL*KTHSIDGGSRGWCS
Trigger: ACTGCACCATCCCCGGCTACCACCGTCTATGCTGTGAGTCTTGCATAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GAGAATTGTCCCCACCGCAGACACCGCACTTGTCATCCGTCTTCATaGATCCCACCTCCTTGTCGCAACCAAAGGGCACACACTCGCCAC +
Preference number: 5 (lower is better)
Translates to: ENCPHRRHRTCHPSS*IPPPCRNQRAHTRH
Trigger: GTGGCGAGTGTGTGCCCTTTGGTTGCGACAAGGAGGTGGGATCCATGAAGACGGATGACAAGTGCGGTGTCTGCGGTGGGGACAATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GAGGCCTCCTTGCCCTTGGGGTTGAAGATGAAGCTTCCGGTCACCTaGTTCTTCACCGCGATTCGGTGGGGAGCCTTCTCCAGCAATTCA +
Preference number: 5 (lower is better)
Translates to: EASLPLGLKMKLPVT*FFTAIRWGAFSSNS
Trigger: TGAATTGCTGGAGAAGGCTCCCCACCGAATCGCGGTGAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp CCCTGTATGGCCCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAAGAGCCGCTGCCTGCTaGGAGCCCTTTCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: PCMAQWVWEGALLRLEEQRAAAC*EPFPRV
Trigger: GACTCTGGGAAAGGGCTCCAAGCAGGCAGCGGCTCT...TTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGGGCCATACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS CCA 90 bp GACTCCCAGGAGTGGAGAAGGTGGGTGGTAAGGCCAGGCTGGCATTaGGGCCTGAGGTCTTCTTTATGCAAGACTCACAGCATAGACGGT +
Preference number: 5 (lower is better)
Translates to: DSQEWRRWVVRPGWH*GLRSSLCKTHSIDG
Trigger: ACCGTCTATGCTGTGAGTCTTGCATAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCACCTTCTCCACTCCTGGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp GGAGTGGGAGGAGCATGCAGAGTTCCCAGCATCCCAGCTCTCCAGAGCTTGCAGAAAGTCGAACCGGCATaGCTCATCCATGGAGTAGTC +
Preference number: 5 (lower is better)
Translates to: GVGGACRVPSIPALQSLQKVEPA*LIHGVV
Trigger: GACTACTCCATGGATGAGCAATGCCGGTTCGACTTT...CTGCAAGCTCTGGAGAGCTGGGATGCTGGGAACTCTGCATGCTCCTCCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp AGCCAGAAGGGAAGAGCCCCCGCCCTCAACTCCAGGAGGAGTAGACTTCAGCAGGAACATGAGCCAAAATaGGTCCAGGAACTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SQKGRAPALNSRRSRLQQEHEPK*VQELQP
Trigger: AGGCTGGAGTTCCTGGACCAATTTTGGCTCATGTTC...CTGCTGAAGTCTACTCCTCCTGGAGTTGAGGGCGGGGGCTCTTCCCTTCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp ACTCTGGGAAGTGGAGCCCGGACTCTGCTAGCTGAGGTATTTCTGGTTAGGGCACTGCTAGAGGCCTCCTaGCCCTTGGGGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: TLGSGARTLLAEVFLVRALLEAS*PLGLKM
Trigger: CATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAG...TGCCCTAACCAGAAATACCTCAGCTAGCAGAGTCCGGGCTCCACTTCCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS GCA 90 bp GGGCAGACACCACATGGGACAAGAAGCGTCCCTGGAAATCTGTGCTaGAAGGCACCGTCACAACATAGTCGTGAAGTTTCCCAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: GQTPHGTRSVPGNLC*KAPSQHSREVSQRG
Trigger: GCCTCTCTGGGAAACTTCACGACTATGTTGTGACGGTGCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGGTGTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 90 bp CGGGGGCAGACACCACATGGGACAAGAAGCGTCCCTGGAAATCTGTaGTGCAAGGCACCGTCACAACATAGTCGTGAAGTTTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RGQTPHGTRSVPGNL*CKAPSQHSREVSQR
Trigger: TCTCTGGGAAACTTCACGACTATGTTGTGACGGTGCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGGTGTCTGCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 90 bp GCAAGAGACTCCCAGGAGTGGAGAAGGTGGGTGGTAAGGCCAGGCTaGCATTGGGGCCTGAGGTCTTCTTTATGCAAGACTCACAGCATA +
Preference number: 5 (lower is better)
Translates to: ARDSQEWRRWVVRPG*HWGLRSSLCKTHSI
Trigger: TATGCTGTGAGTCTTGCATAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCACCTTCTCCACTCCTGGGAGTCTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp GAGGGGGACAGTCTTAGAGGTGACATCTTTCCGGTGGTCACCTTTCAGGCTGGGAAGCCATCCTCGTGGTaGAGGGCACAGCTTCTTAGT +
Preference number: 5 (lower is better)
Translates to: EGDSLRGDIFPVVTFQAGKPSSW*RAQLLS
Trigger: ACTAAGAAGCTGTGCCCTCAACCACGAGGATGGCTT...CCCAGCCTGAAAGGTGACCACCGGAAAGATGTCACCTCTAAGACTGTCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp TACCCTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGCAGATACAATGGCCTTaGAAGCACCACTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: YPNLGSTAASILPGPSAQQIQWP*KHHLPG
Trigger: ACCAGGCAAGTGGTGCTTCAAAGGCCATTGTATCTG...CTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp CTAACCTGGGATCAACAGCAGCTAGCATCCTGCCAGGGCCCTCTGCACAGTCCAGGACAGTCCTCACTGTaGCAGATCTGGTACTCAAAC +
Preference number: 5 (lower is better)
Translates to: LTWDQQQLASCQGPLHSPGQSSL*QIWYSN
Trigger: GTTTGAGTACCAGATCTGCAACAGTGAGGACTGTCC...TGGACTGTGCAGAGGGCCCTGGCAGGATGCTAGCTGCTGTTGATCCCAGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS TCA 90 bp GGGCTCCCAGCGATTCGTCATGGTAAATCTCATCCACGATATTCATaGGCGTCAGCACGTAGTTCTGCGTATGCTCCCTGCCGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: GLPAIRHGKSHPRYS*ASARSSAYAPCRGS
Trigger: GCTTCCACGGCAGGGAGCATACGCAGAACTACGTGCTGACGCTCATGAATATCGTGGATGAGATTTACCATGACGAATCGCTGGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS-3UTR CAA 90 bp CCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATATAAAACCTCCTCCACAGGCCTaGCTGCAGGGAGACCAGCTC +
Preference number: 5 (lower is better)
Translates to: PVGMGRGITETRGTNHIKPPPQA*LQGDQL
Trigger: GAGCTGGTCTCCCTGCAGCAAGGCCTGTGGAGGAGG...TTTTATATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS-3UTR CAA 90 bp CCAGTGGGTATGGGAAGGGGCATTACTGAGACTAGAGGAACAAATCATATAAAATTGGCTGGCATGGCTTaGTGGGTGCCATTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: PVGMGRGITETRGTNHIKLAGMA*WVPLER
Trigger: TCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAA...TTTTATATGATTTGTTCCTCTAGTCTCAGTAATGCCCCTTCCCATACCCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092486.11
CDS CCA 72 bp CTTTCCAGGCTCAGGGGGCTGCGAGCCACGCGGAGGTaGCTCCGTGGTGAGGGAGCTGCGGGGGCAGACACC +
Preference number: 6 (lower is better)
Translates to: LSRLRGLRATRR*LRGEGAAGADT
Trigger: GGTGTCTGCCCCCGCAGCTCCCTCACCACGGAGCCACCTCCGCGTGGCTCGCAGCCCCCTGAGCCTGGAAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp CAGGCCTCGGGGTCTCTCTTTCCAGGCTCAGGGGGCTaGGAGCCACGCGGAGGTGGCTCCGTGGTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: QASGSLFPGSGG*EPRGGGSVVRE
Trigger: CTCCCTCACCACGGAGCCACCTCCGCGTGGCTCGCAGCCCCCTGAGCCTGGAAAGAGAGACCCCGAGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GTAGCTGCCGGGCTTGGCGTGTCGCCGCTTCCGCTCTaGGTCACCCAGCCGGTCCCCCACCAGATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: VAAGLGVSPLPL*VTQPVPHQIQH
Trigger: GTGCTGGATCTGGTGGGGGACCGGCTGGGTGACGCAGAGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CCGCCAGCAGAACCTCGATGCTGTAGCTGCCGGGCTTaGCGTGTCGCCGCTTCCGCTCTGCGTCACCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPAEPRCCSCRA*RVAASALRHPA
Trigger: GGCTGGGTGACGCAGAGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTACAGCATCGAGGTTCTGCTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GAAGTTTCCCAGAGAGGCGCAGGTCTGGGGTCTGACTaGCGGCGGCGGCACAGAGCGCGCAGTACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: EVSQRGAGLGSD*RRRHRARSTRA
Trigger: TGCCCTGGTACTGCGCGCTCTGTGCCGCCGCCGGCAGTCAGACCCCAGACCTGCGCCTCTCTGGGAAACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp TCCTGGCGCTGCTGGGAGTGTGCCCAGCGACACACCTaGTCCAGGCTGCGCGCTGGGTTCCCTCGCTCAATC +
Preference number: 6 (lower is better)
Translates to: SWRCWECAQRHT*SRLRAGFPRSI
Trigger: GATTGAGCGAGGGAACCCAGCGCGCAGCCTGGAGCAGGTGTGTCGCTGGGCACACTCCCAGCAGCGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp TTCAGTGTGGCTAGGGTCCTGGCGCTGCTGGGAGTGTaGCCAGCGACACACCTGCTCCAGGCTGCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: FSVARVLALLGV*PATHLLQAARW
Trigger: CCAGCGCGCAGCCTGGAGCAGGTGTGTCGCTGGGCACACTCCCAGCAGCGCCAGGACCCTAGCCACACTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp GTAGCAGAGCACTGGGACCAGGCTCCTGTCCGCCACTaGGCTGGGCAGGGCACACGGAGGCATGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VAEHWDQAPVRH*AGQGTRRHGFL
Trigger: CAAGAAGCCATGCCTCCGTGTGCCCTGCCCAGCCCAGTGGCGGACAGGAGCCTGGTCCCAGTGCTCTGCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp AGTCATCCACCGCCAGCAGAACCTCGATGCTGTAGCTaGCGGGCTTGGCGTGTCGCCGCTTCCGCTCTGCGT +
Preference number: 6 (lower is better)
Translates to: SHPPPAEPRCCS*RAWRVAASALR
Trigger: ACGCAGAGCGGAAGCGGCGACACGCCAAGCCCGGCAGCTACAGCATCGAGGTTCTGCTGGCGGTGGATGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GGCTTGGGCCTCTTTTTATGGTCACACAGGTGCCGGTaGACCATGTGGTGGTCCCTGCGGCGCCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: GLGLFLWSHRCR*TMWWSLRRRQP
Trigger: TGGCTGCCGGCGCCGCAGGGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TGGGGAGGTGGCGGGAAGGCTGGTGCCTCCATGCCCTaGTTCCTCCCTGGACTGTCCTTGACCCTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: WGGGGKAGASMP*FLPGLSLTLRG
Trigger: ACCTCTGAGGGTCAAGGACAGTCCAGGGAGGAACCAGGGCATGGAGGCACCAGCCTTCCCGCCACCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp CAGGCAGGCAGGCTGCAGATCTGCACCATGTCCGGCTaGACCCCTTCGCATGGCCCGAGGGCACTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: QAGRLQICTMSG*TPSHGPRALEV
Trigger: CACTTCCAGTGCCCTCGGGCCATGCGAAGGGGTCAAGCCGGACATGGTGCAGATCTGCAGCCTGCCTGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp TTGGCCTCTGGCCGGTTACCTAGGCAGGCCTTGGCTGGCATGGCTTaGTGGGTGCCATTGGAGAGAGGCAGCAGGCACTGCACTCCCCGG +
Preference number: 6 (lower is better)
Translates to: LASGRLPRQALAGMA*WVPLERGSRHCTPR
Trigger: CCGGGGAGTGCAGTGCCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTAACCGGCCAGAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp GAATGTGCCTGGCACCCGCCGGGATCTGCACCTGTTTaGGAGCCGCTGCCTGCTTGGAGCCCTTTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: ECAWHPPGSAPV*EPLPAWSPFPE
Trigger: CTCTGGGAAAGGGCTCCAAGCAGGCAGCGGCTCTCAAACAGGTGCAGATCCCGGCGGGTGCCAGGCACATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp GGATGGCGATGGCTTCAGGCAGGGGTCCATTGGTCCTaGGGCTGTCCTTGGTGTCCTCCGCTTCGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GWRWLQAGVHWS*GCPWCPPLRAP
Trigger: GGGAGCACGAAGCGGAGGACACCAAGGACAGCCTCAGGACCAATGGACCCCTGCCTGAAGCCATCGCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp AGGCAGGCAGGCTGCAGATCTGCACCATGTCCGGCTTaGCCCCTTCGCATGGCCCGAGGGCACTGGAAGTGT +
Preference number: 6 (lower is better)
Translates to: RQAGCRSAPCPA*PLRMARGHWKC
Trigger: ACACTTCCAGTGCCCTCGGGCCATGCGAAGGGGTCAAGCCGGACATGGTGCAGATCTGCAGCCTGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp CGGATAGGCTTGGGCCTCTTTTTATGGTCACACAGGTaGCGGTGCACCATGTGGTGGTCCCTGCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RIGLGLFLWSHR*RCTMWWSLRRR
Trigger: CCGGCGCCGCAGGGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp CACTCTTCTGTCACCCACGTGGGCTGGGGACACGAGTaGTGGTTGCAACGCCGTCGGATAGGCTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: HSSVTHVGWGHE*WLQRRRIGLGL
Trigger: GAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCCCCAGCCCACGTGGGTGACAGAAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp AACATAGTCGTGAAGTTTCCCAGAGAGGCGCAGGTCTaGGGTCTGACTGCCGGCGGCGGCACAGAGCGCGCA +
Preference number: 6 (lower is better)
Translates to: NIVVKFPREAQV*GLTAGGGTERA
Trigger: TGCGCGCTCTGTGCCGCCGCCGGCAGTCAGACCCCAGACCTGCGCCTCTCTGGGAAACTTCACGACTATGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CACTCCCTCTGGACGGCTTCCCGGCGGTATACCACATaGGTCCTCCCACCAGCCTCTTTCTCCTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: HSLWTASRRYTT*VLPPASFSCCP
Trigger: AGGGCAGCAGGAGAAAGAGGCTGGTGGGAGGACCCATGTGGTATACCGCCGGGAAGCCGTCCAGAGGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GCTTCAGGCAGGGGTCCATTGGTCCTGAGGCTGTCCTaGGTGTCCTCCGCTTCGTGCTCCCACTCTAGGCCC +
Preference number: 6 (lower is better)
Translates to: ASGRGPLVLRLS*VSSASCSHSRP
Trigger: GGGCCTAGAGTGGGAGCACGAAGCGGAGGACACCAAGGACAGCCTCAGGACCAATGGACCCCTGCCTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp ATGGCGATGGCTTCAGGCAGGGGTCCATTGGTCCTGAGGCTGTCCTaGGTGTCCTCCGCTTCGTGCTCCCACTCTAGGCCCAGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: MAMASGRGPLVLRLS*VSSASCSHSRPSAV
Trigger: CACTGCGCTGGGCCTAGAGTGGGAGCACGAAGCGGAGGACACCAAGGACAGCCTCAGGACCAATGGACCCCTGCCTGAAGCCATCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp CGGAGGCATGGCTTCTTGGCCTCTGGCCGGTTACCTAGGCAGGCCTaGGCTGGCATGGCTTTGTGGGTGCCATTGGAGAGAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RRHGFLASGRLPRQA*AGMALWVPLERGSR
Trigger: CCTGCTGCCTCTCTCCAATGGCACCCACAAAGCCATGCCAGCCAAGGCCTGCCTAGGTAACCGGCCAGAGGCCAAGAAGCCATGCCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp TCTCCTCCACAGGCAGGCAGGCTGCAGATCTGCACCATGTCCGGCTaGACCCCTTCGCATGGCCCGAGGGCACTGGAAGTGTTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: SPPQAGRLQICTMSG*TPSHGPRALEVFLH
Trigger: ATGCAGGAACACTTCCAGTGCCCTCGGGCCATGCGAAGGGGTCAAGCCGGACATGGTGCAGATCTGCAGCCTGCCTGCCTGTGGAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CGTCACCCAGCCGGTCCCCCACCAGATCCAGCACGTTaGGAAGGTCGCCAAGGCCAAAGGCTTCGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: RHPAGPPPDPAR*EGRQGQRLRCE
Trigger: TTCACAACGAAGCCTTTGGCCTTGGCGACCTTCCCAACGTGCTGGATCTGGTGGGGGACCGGCTGGGTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp GTGGGCTGGGGACACGAGTGCTGGTTGCAACGCCGTCGGATAGGCTaGGGCCTCTTTTTATGGTCACACAGGTGCCGGTGCACCATGTGG +
Preference number: 6 (lower is better)
Translates to: VGWGHECWLQRRRIG*GLFLWSHRCRCTMW
Trigger: CCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCCCCAGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp CTGCTGCCCTCGCTCCAGGGGCTCGATGAAGTAGTCTaGGTTGTCTGTGCGGATGAGGCCGGCCAATCCATC +
Preference number: 6 (lower is better)
Translates to: LLPSLQGLDEVV*VVCADEAGQSI
Trigger: GATGGATTGGCCGGCCTCATCCGCACAGACAACTCAGACTACTTCATCGAGCCCCTGGAGCGAGGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp GCTCAATCAGGCTCAGGGACTGTCGGTAGCCCACCATaGTCAGGCGGACAAGGGCGATGTTCACGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: AQSGSGTVGSPP*SGGQGRCSRGL
Trigger: GAGCCCACGTGAACATCGCCCTTGTCCGCCTGATCATGGTGGGCTACCGACAGTCCCTGAGCCTGATTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GCCGGCCAATCCATCACAGTTGCTGATGGCCACAGCTaGCCCGGGCATTCCAGTGACACCTCCAGTGTACAC +
Preference number: 6 (lower is better)
Translates to: AGQSITVADGHS*PGHSSDTSSVH
Trigger: GTGTACACTGGAGGTGTCACTGGAATGCCCGGGGCAGCTGTGGCCATCAGCAACTGTGATGGATTGGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CTCCGTGGTGAGGGAGCTGCGGGGGCAGACACCACATaGGACAAGAAGCGTCCCTGGAAATCTGTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: LRGEGAAGADTT*DKKRPWKSVLQ
Trigger: TTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGGTGTCTGCCCCCGCAGCTCCCTCACCACGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TCTTCTGTCACCCACGTGGGCTGGGGACACGAGTGCTaGTTGCAACGCCGTCGGATAGGCTTGGGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: SSVTHVGWGHEC*LQRRRIGLGLF
Trigger: AAAGAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCCCCAGCCCACGTGGGTGACAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp GCAGATCTGCACCATGTCCGGCTTGACCCCTTCGCATaGCCCGAGGGCACTGGAAGTGTTCCTGCATACCAC +
Preference number: 6 (lower is better)
Translates to: ADLHHVRLDPFA*PEGTGSVPAYH
Trigger: GTGGTATGCAGGAACACTTCCAGTGCCCTCGGGCCATGCGAAGGGGTCAAGCCGGACATGGTGCAGATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp TTGTCTGTGCGGATGAGGCCGGCCAATCCATCACAGTaGCTGATGGCCACAGCTGCCCCGGGCATTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LSVRMRPANPSQ*LMATAAPGIPV
Trigger: CACTGGAATGCCCGGGGCAGCTGTGGCCATCAGCAACTGTGATGGATTGGCCGGCCTCATCCGCACAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp AGGCCCAGCGCAGTGAAGGTCCTGCTAGAGGCCTCCTaGCCCTTGGGGTTGAAGATGAAGCTTCCGGTCACC +
Preference number: 6 (lower is better)
Translates to: RPSAVKVLLEAS*PLGLKMKLPVT
Trigger: GGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAGGACCTTCACTGCGCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GGCCCCCTTGTAGACTTCACATCCTCCAGGGTGGCCTaGGGTGCTGGCAAGAGACTCCCAGGAGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: GPLVDFTSSRVA*GAGKRLPGVEK
Trigger: CTTCTCCACTCCTGGGAGTCTCTTGCCAGCACCCAAGGCCACCCTGGAGGATGTGAAGTCTACAAGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp CCCAGCGCAGTGAAGGTCCTGCTAGAGGCCTCCTTGCCCTTGGGGTaGAAGATGAAGCTTCCGGTCACCTGGTTCTTCACCGCGATTCGG +
Preference number: 6 (lower is better)
Translates to: PSAVKVLLEASLPLG*KMKLPVTWFFTAIR
Trigger: CCGAATCGCGGTGAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAGGACCTTCACTGCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp TCTAGGCCCAGCGCAGTGAAGGTCCTGCTAGAGGCCTCCTTGCCCTaGGGGTTGAAGATGAAGCTTCCGGTCACCTGGTTCTTCACCGCG +
Preference number: 6 (lower is better)
Translates to: SRPSAVKVLLEASLP*GLKMKLPVTWFFTA
Trigger: CGCGGTGAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAGGACCTTCACTGCGCTGGGCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CCCCACCGCAGACACCGCACTTGTCATCCGTCTTCATaGATCCCACCTCCTTGTCGCAACCAAAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: PHRRHRTCHPSS*IPPPCRNQRAH
Trigger: GTGTGCCCTTTGGTTGCGACAAGGAGGTGGGATCCATGAAGACGGATGACAAGTGCGGTGTCTGCGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CTGGGGAGATCCTGTCCGCCACATCTGGTAGCTGTGTaGGCTGGCTTTGCCGATGATCTTCCAGGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LGRSCPPHLVAV*AGFADDLPGWL
Trigger: CAACCAGCCTGGAAGATCATCGGCAAAGCCAGCCCACACAGCTACCAGATGTGGCGGACAGGATCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GGACACGAGTGCTGGTTGCAACGCCGTCGGATAGGCTaGGGCCTCTTTTTATGGTCACACAGGTGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: GHECWLQRRRIG*GLFLWSHRCRC
Trigger: GCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp TCTGTCACCCACGTGGGCTGGGGACACGAGTGCTGGTaGCAACGCCGTCGGATAGGCTTGGGCCTCTTTTTA +
Preference number: 6 (lower is better)
Translates to: SVTHVGWGHECW*QRRRIGLGLFL
Trigger: TAAAAAGAGGCCCAAGCCTATCCGACGGCGTTGCAACCAGCACTCGTGTCCCCAGCCCACGTGGGTGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GGCAGAAGACGGATCTGTCTCGCACACAGGGCTCCATaGTTGAGATCCTGTCCTCAGGAGTCAGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GRRRICLAHRAP*LRSCPQESGAW
Trigger: CCAGGCCCCTGACTCCTGAGGACAGGATCTCAACAATGGAGCCCTGTGTGCGAGACAGATCCGTCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GGTGCCTCCATGCCCTGGTTCCTCCCTGGACTGTCCTaGACCCTCAGAGGTTGGCATAGCTGTTTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: GASMPWFLPGLS*TLRGWHSCLGP
Trigger: TGGACCCAAACAGCTATGCCAACCTCTGAGGGTCAAGGACAGTCCAGGGAGGAACCAGGGCATGGAGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp TCCCACTCTAGGCCCAGCGCAGTGAAGGTCCTGCTAGAGGCCTCCTaGCCCTTGGGGTTGAAGATGAAGCTTCCGGTCACCTGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SHSRPSAVKVLLEAS*PLGLKMKLPVTWFF
Trigger: GAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAGGACCTTCACTGCGCTGGGCCTAGAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp CATTCCAGTGACACCTCCAGTGTACACACACTCCTGCTGCAAGGGTaGTCGGAAGAGTTCCCGAAAGTCCTCCTGCCATTCCACCGGGGC +
Preference number: 6 (lower is better)
Translates to: HSSDTSSVHTLLLQG*SEEFPKVLLPFHRG
Trigger: GCCCCGGTGGAATGGCAGGAGGACTTTCGGGAACTCTTCCGACAACCCTTGCAGCAGGAGTGTGTGTACACTGGAGGTGTCACTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp CATCATCGCAGCCATTGCCCTGGCCGTCATGCTCCATaGCAAGCACATGGCCTGTCTCATGAGCCACGACAA +
Preference number: 6 (lower is better)
Translates to: HHRSHCPGRHAP*QAHGLSHEPRQ
Trigger: TTGTCGTGGCTCATGAGACAGGCCATGTGCTTGGCATGGAGCATGACGGCCAGGGCAATGGCTGCGATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp GACAGTCCTCACTGTTGCAGATCTGGTACTCAAACATaGACCCTGAGCACGGGCGGCCTCCATAGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: DSPHCCRSGTQT*TLSTGGLHRLE
Trigger: CTCCAGCCTATGGAGGCCGCCCGTGCTCAGGGTCCATGTTTGAGTACCAGATCTGCAACAGTGAGGACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TTGCCCTTGGGGTTGAAGATGAAGCTTCCGGTCACCTaGTTCTTCACCGCGATTCGGTGGGGAGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LPLGLKMKLPVT*FFTAIRWGAFS
Trigger: GGAGAAGGCTCCCCACCGAATCGCGGTGAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TTGCAACGCCGTCGGATAGGCTTGGGCCTCTTTTTATaGTCACACAGGTGCCGGTGCACCATGTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LQRRRIGLGLFL*SHRCRCTMWWS
Trigger: GGACCACCACATGGTGCACCGGCACCTGTGTGACCATAAAAAGAGGCCCAAGCCTATCCGACGGCGTTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp GTTGAGATCCTGTCCTCAGGAGTCAGGGGCCTGGATTaGGGTTCCCGGTATCCTGTTTTGGTCACAGGGTCC +
Preference number: 6 (lower is better)
Translates to: VEILSSGVRGLD*GSRYPVLVTGS
Trigger: GGACCCTGTGACCAAAACAGGATACCGGGAACCCCAATCCAGGCCCCTGACTCCTGAGGACAGGATCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp CATAGCTGTTTGGGTCCAGTCCTGAGGTGGCCTCCGTaGGGTAGCAGGAGAATTGCCCGGAAACGCTTTAGG +
Preference number: 6 (lower is better)
Translates to: HSCLGPVLRWPP*GSRRIARKRFR
Trigger: CCTAAAGCGTTTCCGGGCAATTCTCCTGCTACCCCACGGAGGCCACCTCAGGACTGGACCCAAACAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TGGTTCCTCCCTGGACTGTCCTTGACCCTCAGAGGTTaGCATAGCTGTTTGGGTCCAGTCCTGAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: WFLPGLSLTLRG*HSCLGPVLRWP
Trigger: AGGCCACCTCAGGACTGGACCCAAACAGCTATGCCAACCTCTGAGGGTCAAGGACAGTCCAGGGAGGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp AGACTCCCAGGAGTGGAGAAGGTGGGTGGTAAGGCCAGGCTGGCATaGGGGCCTGAGGTCTTCTTTATGCAAGACTCACAGCATAGACGG +
Preference number: 6 (lower is better)
Translates to: RLPGVEKVGGKARLA*GPEVFFMQDSQHRR
Trigger: CCGTCTATGCTGTGAGTCTTGCATAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCACCTTCTCCACTCCTGGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp GAAGACGGATCTGTCTCGCACACAGGGCTCCATTGTTaGGATCCTGTCCTCAGGAGTCAGGGGCCTGGATTG +
Preference number: 6 (lower is better)
Translates to: EDGSVSHTGLHC*DPVLRSQGPGL
Trigger: CAATCCAGGCCCCTGACTCCTGAGGACAGGATCTCAACAATGGAGCCCTGTGTGCGAGACAGATCCGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GGAAGTCCTCGTAGGGCCCAGGACAGTCCTCACTGTTaGAGATCTGGTACTCAAACATGGACCCTGAGCACG +
Preference number: 6 (lower is better)
Translates to: GSPRRAQDSPHC*RSGTQTWTLST
Trigger: CGTGCTCAGGGTCCATGTTTGAGTACCAGATCTGCAACAGTGAGGACTGTCCTGGGCCCTACGAGGACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp GAGTGGAGAAGGTGGGTGGTAAGGCCAGGCTGGCATTaGGGCCTGAGGTCTTCTTTATGCAAGACTCACAGC +
Preference number: 6 (lower is better)
Translates to: EWRRWVVRPGWH*GLRSSLCKTHS
Trigger: GCTGTGAGTCTTGCATAAAGAAGACCTCAGGCCCCAATGCCAGCCTGGCCTTACCACCCACCTTCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GTGAAGGTCCTGCTAGAGGCCTCCTTGCCCTTGGGGTaGAAGATGAAGCTTCCGGTCACCTGGTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: VKVLLEASLPLG*KMKLPVTWFFT
Trigger: GGTGAAGAACCAGGTGACCGGAAGCTTCATCTTCAACCCCAAGGGCAAGGAGGCCTCTAGCAGGACCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp AAGCACATGGCCTGTCTCATGAGCCACGACAAAAGCTaGGGAGAAGCCATCCTCGTGGTTGAGGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: KHMACLMSHDKS*GEAILVVEGTA
Trigger: AGCTGTGCCCTCAACCACGAGGATGGCTTCTCCTCAGCTTTTGTCGTGGCTCATGAGACAGGCCATGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp GGCATTCCAGTGACACCTCCAGTGTACACACACTCCTaGTGCAAGGGTTGTCGGAAGAGTTCCCGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: GIPVTPPVYTHS*CKGCRKSSRKS
Trigger: GGACTTTCGGGAACTCTTCCGACAACCCTTGCAGCAGGAGTGTGTGTACACTGGAGGTGTCACTGGAATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TGGGGTTCCCGGTATCCTGTTTTGGTCACAGGGTCCTaGACCTCCGCCTTCACTGTAGAGTTCTGGAGATCT +
Preference number: 6 (lower is better)
Translates to: WGSRYPVLVTGS*TSAFTVEFWRS
Trigger: AGATCTCCAGAACTCTACAGTGAAGGCGGAGGTCCAGGACCCTGTGACCAAAACAGGATACCGGGAACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp GACACCTCCAGTGTACACACACTCCTGCTGCAAGGGTaGTCGGAAGAGTTCCCGAAAGTCCTCCTGCCATTC +
Preference number: 6 (lower is better)
Translates to: DTSSVHTLLLQG*SEEFPKVLLPF
Trigger: GAATGGCAGGAGGACTTTCGGGAACTCTTCCGACAACCCTTGCAGCAGGAGTGTGTGTACACTGGAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 72 bp AGAAGACGGATCTGTCTCGCACACAGGGCTCCATTGTaGAGATCCTGTCCTCAGGAGTCAGGGGCCTGGATT +
Preference number: 6 (lower is better)
Translates to: RRRICLAHRAPL*RSCPQESGAWI
Trigger: AATCCAGGCCCCTGACTCCTGAGGACAGGATCTCAACAATGGAGCCCTGTGTGCGAGACAGATCCGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TTGCAGGGCTCAAAGGTCCTGAAAGCTAAGCAGGTGTaGTACCCAGTGCCAAAGTCGAACCGGCATTGCTCA +
Preference number: 6 (lower is better)
Translates to: LQGSKVLKAKQV*YPVPKSNRHCS
Trigger: TGAGCAATGCCGGTTCGACTTTGGCACTGGGTACCACACCTGCTTAGCTTTCAGGACCTTTGAGCCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp CCACATGGGACAAGAAGCGTCCCTGGAAATCTGTGCTaGAAGGCACCGTCACAACATAGTCGTGAAGTTTCC +
Preference number: 6 (lower is better)
Translates to: PHGTRSVPGNLC*KAPSQHSREVS
Trigger: GGAAACTTCACGACTATGTTGTGACGGTGCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CAA 90 bp GCTGTAAGGATCGCGATAGCTGCAGCGTGTCCCATCGTGGACTACTaGGTTCATAAATACCACATCTCCAGTGTCGGCAGACTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: AVRIAIAAACPIVDY*VHKYHISSVGRLAN
Trigger: ATTTGCCAGTCTGCCGACACTGGAGATGTGGTATTTATGAACCAAGTAGTCCACGATGGGACACGCTGCAGCTATCGCGATCCTTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS GCA 72 bp ACACCACATGGGACAAGAAGCGTCCCTGGAAATCTGTaGTGCAAGGCACCGTCACAACATAGTCGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: TPHGTRSVPGNL*CKAPSQHSREV
Trigger: AACTTCACGACTATGTTGTGACGGTGCCTTGCAGCACAGATTTCCAGGGACGCTTCTTGTCCCATGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS CCA 72 bp TGGTTCATAAATACCACATCTCCAGTGTCGGCAGACTaGCAAATGAGCTCGCACTTCTGGGCATCACTGTCG +
Preference number: 6 (lower is better)
Translates to: WFINTTSPVSAD*QMSSHFWASLS
Trigger: CGACAGTGATGCCCAGAAGTGCGAGCTCATTTGCCAGTCTGCCGACACTGGAGATGTGGTATTTATGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp GCGATTCGTCATGGTAAATCTCATCCACGATATTCATaGGCGTCAGCACGTAGTTCTGCGTATGCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: AIRHGKSHPRYS*ASARSSAYAPC
Trigger: GCAGGGAGCATACGCAGAACTACGTGCTGACGCTCATGAATATCGTGGATGAGATTTACCATGACGAATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2
CDS TCA 72 bp AAGTTTGCTCTGGTGACTTCCAGATACAATGGCCTTTaGAGCACCACTTGCCTGGTGCACACTCTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: KFALVTSRYNGL*STTCLVHTLSH
Trigger: ATGGGACAGAGTGTGCACCAGGCAAGTGGTGCTTCAAAGGCCATTGTATCTGGAAGTCACCAGAGCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000092486.11
ENSMUST00000120336.2