RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047497

Ensembl transcript IDs: ENSMUST00000061318.9

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGGCCTATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATaGAGCACCTGGCCAGACTCTCCCCACAGACTCATGATGGGTCCC +
Preference number: 1 (lower is better)
Translates to: RGLFPVLQKLEEDLE*STWPDSPHRLMMGP
Trigger: GGGACCCATCATGAGTCTGTGGGGAGAGTCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAATAGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR TCA 90 bp CAGTTTTTGTGTATAATCTTCCTGCACAGGGATGACAGCAGGACCTaGGGTCATGACCCCAATAAGGACAGGGCAGGAGAAAGTCTGGCA +
Preference number: 1 (lower is better)
Translates to: QFLCIIFLHRDDSRT*GHDPNKDRAGESLA
Trigger: TGCCAGACTTTCTCCTGCCCTGTCCTTATTGGGGTCATGACCTCAGGTCCTGCTGTCATCCCTGTGCAGGAAGATTATACACAAAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp GATTTGCCTAATCTGGCACTTTCCCCAGGAACTCATCTCAACTGCTaGAGCATTCTCTCAAATACTTTGTCTTCCTATCAGGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: DLPNLALSPGTHLNC*SILSNTLSSYQGAA
Trigger: GGCTGCTCCCTGATAGGAAGACAAAGTATTTGAGAGAATGCTGCAGCAGTTGAGATGAGTTCCTGGGGAAAGTGCCAGATTAGGCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp CAGATCCTTGATGGAGGTGGTTCAAAACTGACTCTCAAAAAGTATTaGACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCAGGA +
Preference number: 1 (lower is better)
Translates to: QILDGGGSKLTLKKY*TGKPVKTCCLRRPG
Trigger: TCCTGGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGAGTCAGTTTTGAACCACCTCCATCAAGGATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp CTCCTATCTTATCAAGAGCTGGTTCTGGGGCCTTTCCCCAGGGCTTaGATCTCTCTAAATGTTCTTCCTTTCACTCTAGGTTCAGTCTAT +
Preference number: 1 (lower is better)
Translates to: LLSYQELVLGPFPRA*ISLNVLPFTLGSVY
Trigger: ATAGACTGAACCTAGAGTGAAAGGAAGAACATTTAGAGAGATGCAAGCCCTGGGGAAAGGCCCCAGAACCAGCTCTTGATAAGATAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp AAACTGACTCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATaGTGTCTCAGGAGACCAGGAGAAGTGTCTGTGCTCTTGTTAGGA +
Preference number: 1 (lower is better)
Translates to: KLTLKKYCTGKPVKT*CLRRPGEVSVLLLG
Trigger: TCCTAACAAGAGCACAGACACTTCTCCTGGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGAGTCAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp CATTTTCCTGTCCTTATTGACTACTGGATAGATGTTCCTGAAAATTaGCACACGACTTCTAAACAGTGGCTACCCAAAGCACCCAAAGAG +
Preference number: 1 (lower is better)
Translates to: HFPVLIDYWIDVPEN*HTTSKQWLPKAPKE
Trigger: CTCTTTGGGTGCTTTGGGTAGCCACTGTTTAGAAGTCGTGTGGCAATTTTCAGGAACATCTATCCAGTAGTCAATAAGGACAGGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 90 bp TCCCCACAGACTCATGATGGGTCCCAAATGACATGGTTTACCTTTTaGATTGGGAAATCTGGCCTACTTATGTTTGTTGAGGTTAGTAAA +
Preference number: 1 (lower is better)
Translates to: SPQTHDGSQMTWFTF*IGKSGLLMFVEVSK
Trigger: TTTACTAACCTCAACAAACATAAGTAGGCCAGATTTCCCAATGCAAAAGGTAAACCATGTCATTTGGGACCCATCATGAGTCTGTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CCA 90 bp TACTGGATAGATGTTCCTGAAAATTGCCACACGACTTCTAAACAGTaGCTACCCAAAGCACCCAAAGAGGATATACTCATGAAGACAAAT +
Preference number: 1 (lower is better)
Translates to: YWIDVPENCHTTSKQ*LPKAPKEDILMKTN
Trigger: ATTTGTCTTCATGAGTATATCCTCTTTGGGTGCTTTGGGTAGCCACTGTTTAGAAGTCGTGTGGCAATTTTCAGGAACATCTATCCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CCA 90 bp TCCTGGGTAATTGTGGCTCTATTTCTTGATACTCTTGAGGTAGTTTaGAAAAATAAAATCTGGTCTGTACTTGTATCTTTAAAGGGCGAA +
Preference number: 1 (lower is better)
Translates to: SWVIVALFLDTLEVV*KNKIWSVLVSLKGE
Trigger: TTCGCCCTTTAAAGATACAAGTACAGACCAGATTTTATTTTTCCAAACTACCTCAAGAGTATCAAGAAATAGAGCCACAATTACCCAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 90 bp TCCCCAGGAACTCATCTCAACTGCTGCAGCATTCTCTCAAATACTTaGTCTTCCTATCAGGGAGCAGCCAGCCCCAAGCTTTCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: SPGTHLNCCSILSNT*SSYQGAASPKLSVR
Trigger: CCTCACAGAAAGCTTGGGGCTGGCTGCTCCCTGATAGGAAGACAAAGTATTTGAGAGAATGCTGCAGCAGTTGAGATGAGTTCCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCGGGCAGGAGAAAGTCTaGCAGACAGGAGCACACATT +
Preference number: 2 (lower is better)
Translates to: SQKVLHWEASEDMLSQETGQEKV*QTGAHI
Trigger: AATGTGTGCTCCTGTCTGCCAGACTTTCTCCTGCCC...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCTGTCTGGGACCCTCTTaGCTTGCTTGCTTTCCACAA +
Preference number: 2 (lower is better)
Translates to: SQKVLHWEASEDMLSQETCLGPS*LACFPQ
Trigger: TTGTGGAAAGCAAGCAAGTCAAGAGGGTCCCAGACA...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCTATCTTATCAAGAGCTaGTTCTGGGGCCTTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SQKVLHWEASEDMLSQETYLIKS*FWGLSP
Trigger: TGGGGAAAGGCCCCAGAACCAGCTCTTGATAAGATA...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCGGGTCCCAAATGACATaGTTTACCTTTTGCATTGGG +
Preference number: 2 (lower is better)
Translates to: SQKVLHWEASEDMLSQETGSQMT*FTFCIG
Trigger: CCCAATGCAAAAGGTAAACCATGTCATTTGGGACCC...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAAAAGCCAGGAAGGTTTaGGGAACAAGAACCACTCAT +
Preference number: 2 (lower is better)
Translates to: CHLLGISTKFNSTILLNGKARKV*GTRTTH
Trigger: ATGAGTGGTTCTTGTTCCTCAAACCTTCCTGGCTTT...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCTCCCCACAGACTCATaGTGGGTCCCAAATGACATG +
Preference number: 2 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKLPTDS*WVPNDM
Trigger: CATGTCATTTGGGACCCATCATGAGTCTGTGGGGAG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 90 bp TCTGTACTTGTATCTTTAAAGGGCGAAAGACATATTTTCACAGATTaGCCTAATCTGGCACTTTCCCCAGGAACTCATCTCAACTGCTGC +
Preference number: 2 (lower is better)
Translates to: SVLVSLKGERHIFTD*PNLALSPGTHLNCC
Trigger: GCAGCAGTTGAGATGAGTTCCTGGGGAAAGTGCCAGATTAGGCAAATCTGTGAAAATATGTCTTTCGCCCTTTAAAGATACAAGTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 90 bp ACTCTAGGTTCAGTCTATAGGCTAACCTGGAAATTTGCTCTGATTTaGTGCTCACAGCCTATTCTGACTTCAGTATGTGTTCGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TLGSVYRLTWKFALI*CSQPILTSVCVRVC
Trigger: ACACACACGAACACATACTGAAGTCAGAATAGGCTGTGAGCACAAAATCAGAGCAAATTTCCAGGTTAGCCTATAGACTGAACCTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCACTCATCTCAACTGCTaGAGCATTCTCTCAAATACT +
Preference number: 2 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLTHLNC*SILSNT
Trigger: AGTATTTGAGAGAATGCTGCAGCAGTTGAGATGAGT...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGCTAACCTGGAAATTTaGTCTGATTTTGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: CHLLGISTKFNSTILLNGANLEI*SDFVLT
Trigger: TGTGAGCACAAAATCAGAGCAAATTTCCAGGTTAGC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCAAAAGTGGTTTAACCTaGAACTTCACTTTTTCTGTC +
Preference number: 2 (lower is better)
Translates to: SQKVLHWEASEDMLSQETKSGLT*NFTFSV
Trigger: GACAGAAAAAGTGAAGTTCCAGGTTAAACCACTTTT...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAGTGTATACGTATGCATaGATGTTTCTAGAGACCAAA +
Preference number: 2 (lower is better)
Translates to: ISCTSETGGRSRMKHLARVYTYA*MFLETK
Trigger: TTTGGTCTCTAGAAACATTCATGCATACGTATACAC...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATATTTTCACAGATTTaGCTAATCTGGCACTTTCCC +
Preference number: 2 (lower is better)
Translates to: ISCTSETGGRSRMKHLARIFSQI*LIWHFP
Trigger: GGGAAAGTGCCAGATTAGGCAAATCTGTGAAAATAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 90 bp AAATCTGGCCTACTTATGTTTGTTGAGGTTAGTAAAGATCCAAGTTaGTTCCTGAGTTTCATAAGCCTGGTCATACACAGGACTCTAGTG +
Preference number: 2 (lower is better)
Translates to: KSGLLMFVEVSKDPS*FLSFISLVIHRTLV
Trigger: CACTAGAGTCCTGTGTATGACCAGGCTTATGAAACTCAGGAACAAACTTGGATCTTTACTAACCTCAACAAACATAAGTAGGCCAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCCAAAGTTACAGCCTTaGACAACTATGCTAAATGTG +
Preference number: 2 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKPKLQP*TTMLNV
Trigger: CACATTTAGCATAGTTGTGCAAGGCTGTAACTTTGG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCCTTTCCCCAGGGCTTaGATCTCTCTAAATGTTCTT +
Preference number: 2 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFPFPRA*ISLNVL
Trigger: AAGAACATTTAGAGAGATGCAAGCCCTGGGGAAAGG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGATGCTTGTGAGAAGTTaGTTTCTGTTTCTTCGTGAT +
Preference number: 2 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKMLVRS*FLFLRD
Trigger: ATCACGAAGAAACAGAAATCAACTTCTCACAAGCAT...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR TCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTACATGCTAGTGGCTTaGAAGAGTTTAAAAGCACAA +
Preference number: 2 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKYMLVA*KSLKAQ
Trigger: TTGTGCTTTTAAACTCTTTCAAGCCACTAGCATGTA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGATGTTCCTGAAAATTaGCACACGACTTCTAAACAG +
Preference number: 2 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFDVPEN*HTTSKQ
Trigger: CTGTTTAGAAGTCGTGTGGCAATTTTCAGGAACATC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGTATGTGTATACGTATaGATGAATGTTTCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKVCVYV*MNVSRD
Trigger: GTCTCTAGAAACATTCATGCATACGTATACACATAC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGCTAGACACACACATTaGATTTTGTTTTGTTATGAC +
Preference number: 2 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLARHTH*ILFCYD
Trigger: GTCATAACAAAACAAAATGCAATGTGTGTGTCTAGC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGTCCTTATTGACTACTaGATAGATGTTCCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLVLIDY*IDVPEN
Trigger: ATTTTCAGGAACATCTATCCAGTAGTCAATAAGGAC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGTTTACCTTTTGCATTaGGAAATCTGGCCTACTTAT +
Preference number: 2 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFVYLLH*EIWPTY
Trigger: ATAAGTAGGCCAGATTTCCCAATGCAAAAGGTAAAC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CCA 72 bp CTGAAGGCATACGTTGCCTCCTATCTTATCAAGAGCTaGTTCTGGGGCCTTTCCCCAGGGCTTGCATCTCTC +
Preference number: 3 (lower is better)
Translates to: LKAYVASYLIKS*FWGLSPGLASL
Trigger: GAGAGATGCAAGCCCTGGGGAAAGGCCCCAGAACCAGCTCTTGATAAGATAGGAGGCAACGTATGCCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CCA 72 bp GTCATGACCCCAATAAGGACAGGGCAGGAGAAAGTCTaGCAGACAGGAGCACACATTTGTTCTGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: VMTPIRTGQEKV*QTGAHICSVTS
Trigger: GCTGGTCACAGAACAAATGTGTGCTCCTGTCTGCCAGACTTTCTCCTGCCCTGTCCTTATTGGGGTCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCGTCTGGACCATGTTCTaGGGTATCAGGCTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: SQKVLHWEASEDMLSQETVWTMF*GIRLWR
Trigger: CCTCCACAGCCTGATACCCAAGAACATGGTCCAGAC...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR TCA 72 bp TGGCAGACAGGAGCACACATTTGTTCTGTGACCAGCTaGCAAAGCCAGGAAGGTTTGAGGAACAAGAACCAC +
Preference number: 3 (lower is better)
Translates to: WQTGAHICSVTS*QSQEGLRNKNH
Trigger: GTGGTTCTTGTTCCTCAAACCTTCCTGGCTTTGTCAGCTGGTCACAGAACAAATGTGTGCTCCTGTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp CTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATaGTGTCTCAGGAGACCAGGAGAAGTGTCTGTGCTC +
Preference number: 3 (lower is better)
Translates to: LKKYCTGKPVKT*CLRRPGEVSVL
Trigger: GAGCACAGACACTTCTCCTGGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp TATCAAGAGCTGGTTCTGGGGCCTTTCCCCAGGGCTTaGATCTCTCTAAATGTTCTTCCTTTCACTCTAGGT +
Preference number: 3 (lower is better)
Translates to: YQELVLGPFPRA*ISLNVLPFTLG
Trigger: ACCTAGAGTGAAAGGAAGAACATTTAGAGAGATGCAAGCCCTGGGGAAAGGCCCCAGAACCAGCTCTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGACAGGAGCACACATTaGTTCTGTGACCAGCTGACA +
Preference number: 3 (lower is better)
Translates to: CHLLGISTKFNSTILLNGDRSTH*FCDQLT
Trigger: TGTCAGCTGGTCACAGAACAAATGTGTGCTCCTGTC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGCCTTTCCCCAGGGCTaGCATCTCTCTAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: CHLLGISTKFNSTILLNGAFPQG*HLSKCS
Trigger: AGAACATTTAGAGAGATGCAAGCCCTGGGGAAAGGC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp TTCACAACTGACCCTGTGAAGACACTATCTAGCTCTTaGTGTCAGCGTCATCCTGCTATTCACGGTTCTTCT +
Preference number: 3 (lower is better)
Translates to: FTTDPVKTLSSS*CQRHPAIHGSS
Trigger: AGAAGAACCGTGAATAGCAGGATGACGCTGACAGCAAGAGCTAGATAGTGTCTTCACAGGGTCAGTTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGACACCAGAGATTGTCATaGGCCAGCAATGTTCTTATG +
Preference number: 3 (lower is better)
Translates to: ISCTSETGGRSRMKHLARHQRLS*ASNVLM
Trigger: CATAAGAACATTGCTGGCCAATGACAATCTCTGGTG...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp AATCTGGCACTTTCCCCAGGAACTCATCTCAACTGCTaGAGCATTCTCTCAAATACTTTGTCTTCCTATCAG +
Preference number: 3 (lower is better)
Translates to: NLALSPGTHLNC*SILSNTLSSYQ
Trigger: CTGATAGGAAGACAAAGTATTTGAGAGAATGCTGCAGCAGTTGAGATGAGTTCCTGGGGAAAGTGCCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CCA 72 bp GATGTTCCTGAAAATTGCCACACGACTTCTAAACAGTaGCTACCCAAAGCACCCAAAGAGGATATACTCATG +
Preference number: 3 (lower is better)
Translates to: DVPENCHTTSKQ*LPKAPKEDILM
Trigger: CATGAGTATATCCTCTTTGGGTGCTTTGGGTAGCCACTGTTTAGAAGTCGTGTGGCAATTTTCAGGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAAAATTTGCTCTGATTTaGTGCTCACAGCCTATTCTG +
Preference number: 3 (lower is better)
Translates to: ISCTSETGGRSRMKHLARKFALI*CSQPIL
Trigger: CAGAATAGGCTGTGAGCACAAAATCAGAGCAAATTT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp ACTCATGATGGGTCCCAAATGACATGGTTTACCTTTTaGATTGGGAAATCTGGCCTACTTATGTTTGTTGAG +
Preference number: 3 (lower is better)
Translates to: THDGSQMTWFTF*IGKSGLLMFVE
Trigger: CTCAACAAACATAAGTAGGCCAGATTTCCCAATGCAAAAGGTAAACCATGTCATTTGGGACCCATCATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGTCTGTGAGGAACATTTaGTGGCTAGACACACACATT +
Preference number: 3 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKSVRNI*WLDTHI
Trigger: AATGTGTGTGTCTAGCCACAAAATGTTCCTCACAGA...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATACATGCTAGTGGCTaGAAAGAGTTTAAAAGCACA +
Preference number: 3 (lower is better)
Translates to: ISCTSETGGRSRMKHLARIHASG*KEFKST
Trigger: TGTGCTTTTAAACTCTTTCAAGCCACTAGCATGTAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCTATTTCACCAGAGATaGTCATTGGCCAGCAATGTT +
Preference number: 3 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKLFHQR*SLASNV
Trigger: AACATTGCTGGCCAATGACAATCTCTGGTGAAATAG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCATATTTTCACAGATTaGCCTAATCTGGCACTTTCC +
Preference number: 3 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKHIFTD*PNLALS
Trigger: GGAAAGTGCCAGATTAGGCAAATCTGTGAAAATATG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR TCA 72 bp AGAGAACAACAGCTAACCAGATGGGAAGTTAGGGTCTaGAATAATATAATCCCTCAAACTGCTTCAGATCCT +
Preference number: 3 (lower is better)
Translates to: REQQLTRWEVRV*NNIIPQTASDP
Trigger: AGGATCTGAAGCAGTTTGAGGGATTATATTATTTCAGACCCTAACTTCCCATCTGGTTAGCTGTTGTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCACACACATTGCATTTaGTTTTGTTATGACCCAAAG +
Preference number: 3 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKHTHCI*FCYDPK
Trigger: CTTTGGGTCATAACAAAACAAAATGCAATGTGTGTG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR GCA 72 bp CCTCTGTTTTTGATTCTCTGTGTATGTGTATACGTATaGATGAATGTTTCTAGAGACCAAAGTTACAGCCTT +
Preference number: 3 (lower is better)
Translates to: PLFLILCVCVYV*MNVSRDQSYSL
Trigger: AAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATACACATACACAGAGAATCAAAAACAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR TCA 72 bp AGGAACAAGAACCACTCATTTTCTTTCTTATGCTTGTaGGAAGTTGATTTCTGTTTCTTCGTGATTTTAGGA +
Preference number: 3 (lower is better)
Translates to: RNKNHSFSFLCL*EVDFCFFVILG
Trigger: TCCTAAAATCACGAAGAAACAGAAATCAACTTCTCACAAGCATAAGAAAGAAAATGAGTGGTTCTTGTTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGCGGCTAAATGGGCACTaGTGGAGGCCGCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLRLNGH*WRPHRA
Trigger: AGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCG...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCGTCCACCCCAGAGCTaGACTCCACACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETRPPQS*TPHSSS
Trigger: ACTGGAGGAGTGTGGAGTGCAGCTCTGGGGTGGACG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCAGGCACTGTGGGTGTaGACAGTGGCGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLQALWV*TVAWAW
Trigger: CCAGGCCCACGCCACTGTCCACACCCACAGTGCCTG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGCCTCAGGCTCCGGTaGTGGTCCAGGCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGLRLR*WSRLSM
Trigger: CATGGACAGCCTGGACCACCACCGGAGCCTGAGGCC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCCCAGCCTCCAGGGATaGTCTCTGGTTTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETPSLQG*SLVSSP
Trigger: TGGGGAAGAAACCAGAGAGCATCCCTGGAGGCTGGG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTGCCTCTGGGTGTGGATaGTGGGCGCCTGTGGACACG +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTASGCG*WAPVDT
Trigger: CGTGTCCACAGGCGCCCAGCATCCACACCCAGAGGC...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTTGGGACATGATGTATaGGTGCCTGCCCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLLGHDV*VPAHGL
Trigger: GAGCCCGTGGGCAGGCACCCATACATCATGTCCCAA...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCTCAGGCTCCGGTGGTaGTCCAGGCTGTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLLRLRW*SRLSMH
Trigger: GTGCATGGACAGCCTGGACCACCACCGGAGCCTGAG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGGCCTGGATGTTGGTaGTGGGATGGGCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGPGCW*WDGLEG
Trigger: CCCTTCAAGCCCATCCCAGCACCAACATCCAGGCCC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCTGAGATGGCAGGGCTaGCCTGAGGAAGCCACCATC +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLLRWQG*PEEATI
Trigger: GATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCAGGAAACCAGTGCTTTaGGCTTCAGCAGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETRKPVL*ASAGAG
Trigger: GCCAGCACCTGCTGAAGCCCAAAGCACTGGTTTCCT...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGATGTGGGTGTGGACAGTaGCGTGGGCCTGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGCGCGQ*RGPGCW
Trigger: CCAACATCCAGGCCCACGCCACTGTCCACACCCACA...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 72 bp AGGGCAGGAGAAAGTCTGGCAGACAGGAGCACACATTaGTTCTGTGACCAGCTGACAAAGCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RAGESLADRSTH*FCDQLTKPGRF
Trigger: AAACCTTCCTGGCTTTGTCAGCTGGTCACAGAACAAATGTGTGCTCCTGTCTGCCAGACTTTCTCCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGCAGAACTGTGCCCCTaGGATGGCAGGGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLAELCP*DGRAGL
Trigger: CAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAAGGCTGGCACATTCCTaGCAATTGGGACAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGRLAHS*QLGQPQ
Trigger: CTGGGGCTGTCCCAATTGTCAGGAATGTGCCAGCCT...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGACATGATGTATGGGTaGCTGCCCACGGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGDMMYG*LPTGSQ
Trigger: CTGTGAGCCCGTGGGCAGGCACCCATACATCATGTC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGATTGGGCTTCAGCAGGTaGTGGCAGTCTGTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGLGFSR*WQSVAG
Trigger: CCCTGCTACAGACTGCCAGCACCTGCTGAAGCCCAA...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGAATTTCGGGAGCACTTaGTCCAGTTTCCCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLNFGST*SSFPLA
Trigger: GGCGAGTGGGAAACTGGAGCAAGTGCTCCCGAAATT...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGCCAGGGTTAGTCACCTaGAAAAGTAGCTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLPGLVT*KSSWSH
Trigger: GTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGG...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGCTTCAGCAGGTGCTaGCAGTCTGTAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGFSRC*QSVAGR
Trigger: TCTCCCTGCTACAGACTGCCAGCACCTGCTGAAGCC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTGTGTGGACAGTGGCGTaGGCCTGGATGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTVWTVA*AWMLVL
Trigger: CAGCACCAACATCCAGGCCCACGCCACTGTCCACAC...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCGAACCGGCCAGGGCTaGGTTTGTCTCCCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKRTGQG*VCLPWQ
Trigger: TTGCCACGGGAGACAAACTCAGCCCTGGCCGGTTCG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGTCCTTGGCAGGCACTaGGAGCTGCTGTCCCGATCC +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLVLGRH*ELLSRS
Trigger: GGATCGGGACAGCAGCTCTCAGTGCCTGCCAAGGAC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCGGAGTTGGGTCGTACTaGATCTGTTGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETGVGSY*ICWDMM
Trigger: CATCATGTCCCAACAGATTCAGTACGACCCAACTCC...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGATGGGGTGCCATCAATaGCAGCTTCCAGCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLMGCHQ*QLPAFS
Trigger: AGAGAATGCTGGAAGCTGTCATTGATGGCACCCCAT...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGTTCTTGGCACATGTaGCACTGCGAATCCGCACTC +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGSWHM*HCESAL
Trigger: GAGTGCGGATTCGCAGTGTCACATGTGCCAAGAACC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCTTCCCAGTGGCCCAGTaGCAGCAAAGGTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLFPVAQ*QQRCLL
Trigger: CAACAGACACCTTTGCTGTCACTGGGCCACTGGGAA...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGTCCCCAGAACCACCTaGAGCTCTCTTCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLVPRTT*SSLLPA
Trigger: AGCAGGAAGAAGAGAGCTGCAGGTGGTTCTGGGGAC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCAGCACTCACTCCAGTTaGCTACTGTCCAGTCTGATG +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETSTHSS*LLSSLM
Trigger: CATCAGACTGGACAGTAGGCAACTGGAGTGAGTGCT...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCTCCAGGGATGCTCTCTaGTTTCTTCCCCACTGTGAT +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETSRDAL*FLPHCD
Trigger: ATCACAGTGGGGAAGAAACCAGAGAGCATCCCTGGA...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAAGCTTCTTCACCGTCTaGCAGGCAGAGCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARSFFTV*QAEPSP
Trigger: TGGAGATGGCTCTGCCTGCCAGACGGTGAAGAAGCT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCTGCCCACCACCTGGGTaGACAGTCCTTTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLCPPPG*TVLFMA
Trigger: TGCCATGAAAAGGACTGTCCACCCAGGTGGTGGGCA...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCTAAATGGGCACTGCTaGAGGCCGCACAGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTLNGHC*RPHRAR
Trigger: TCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAGAGGTTGCTGGATGGTaGTCTCCTGCAAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLAREVAGW*SPARGS
Trigger: ACTCCCTCTTGCAGGAGACCACCATCCAGCAACCTC...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
3UTR CAA 72 bp ACTCATCTCAACTGCTGCAGCATTCTCTCAAATACTTaGTCTTCCTATCAGGGAGCAGCCAGCCCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: THLNCCSILSNT*SSYQGAASPKL
Trigger: AAGCTTGGGGCTGGCTGCTCCCTGATAGGAAGACAAAGTATTTGAGAGAATGCTGCAGCAGTTGAGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGATGGCAGGGCTGGCCTaGGGAAGCCACCATCTTAAC +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKMAGLA*GSHHLN
Trigger: GTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCAT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGTCACTCTTGGGATTaGTGCTCTTCTGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGHSWD*CSSATC
Trigger: GCAAGTGGCAGAAGAGCATCAATCCCAAGAGTGACC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATGTTACAGCTCCTGTaGGGCTGGCACATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARMLQLL*GWHIPD
Trigger: GTCAGGAATGTGCCAGCCTCACAGGAGCTGTAACAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCTGGAGCCAAGGCTGTTaGTTGTGGGAGTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLWSQGC*LWEYLC
Trigger: GCACAAGTACTCCCACAATCAACAGCCTTGGCTCCA...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGCTGGCAGAAGCTGATTaGAAGTCTGTCCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLLAEAD*KSVLQA
Trigger: TGCTTGAAGGACAGACTTTCAATCAGCTTCTGCCAG...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCCACCCATCTCTCCTTaGTTATGGAACGTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLPPISP*LWNVGR
Trigger: TCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAGGTCCAGGCTGTCCATaGACTGAACCTCACGAATCT +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARGPGCP*TEPHES
Trigger: AGATTCGTGAGGTTCAGTGCATGGACAGCCTGGACC...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGGCTCCTTTGTCTCTaGAGCTCTGATGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGLLCL*SSDALS
Trigger: AGACAGAGCATCAGAGCTCCAGAGACAAAGGAGCCC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGGAGCACCACAGTGTCTaGCAAACATTTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLEHHSV*QTFSTS
Trigger: GGAAGTGGAAAATGTTTGCCAGACACTGTGGTGCTC...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGTTCATCCGAGCCCATaGTCTGGATGCACAGCACCG +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKVHPSP*SGCTAP
Trigger: CGGTGCTGTGCATCCAGACCATGGGCTCGGATGAAC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTAACTCTACGGCTAAATaGGCACTGCTGGAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTNSTAK*ALLEAA
Trigger: TGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTT...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGAAGTCACGGGGACCTaGGAAGTGCTTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLEVTGT*EVLPEE
Trigger: TTCTTCTGGAAGCACTTCCCAGGTCCCCGTGACTTC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGCCAGAGTCTTCATTaGTGTTACAGCTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGQSLH*CYSSCE
Trigger: CTCACAGGAGCTGTAACATCAATGAAGACTCTGGCC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGTCCAAGAAGCGAGTaGTGTACTCCTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGPRSE*CTPCCI
Trigger: AATGCAGCAAGGAGTACATCACTCGCTTCTTGGACC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAACTGTGGTGCCCTGCTaGAGAACTGTGCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLTVVPC*RTVPLR
Trigger: TCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGCAGGGGTGGACATTaGATAAGCGATAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGRGGH*ISDSVF
Trigger: GAAAACGCTATCGCTTATGCAATGTCCACCCCTGCC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTACTCCAGGGCTCCACTTaGCATTCTCCACAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLLQGST*HSPQGS
Trigger: GGAGCCTTGTGGAGAATGGCAAGTGGAGCCCTGGAG...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAAATCAGCACTCTTCCTaGAGGCTTGCTGGTTGCATG +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARNQHSS*RLAGCM
Trigger: CATGCAACCAGCAAGCCTGCAGGAAGAGTGCTGATT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATCTCTCCTTGCTTATaGAACGTCGGGAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARISPCL*NVGRGF
Trigger: GAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTCCGAGCCCATGGTCTaGATGCACAGCACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKSEPMV*MHSTVL
Trigger: GAGAACGGTGCTGTGCATCCAGACCATGGGCTCGGA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGATGTATCTCCACTTCTaGATCTGTGGTCATGGTGCT +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLMYLHF*ICGHGA
Trigger: AGCACCATGACCACAGATCCAGAAGTGGAGATACAT...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCTTGTCTCTGGAGCTCTaGTGCTCTGTCTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLLSLEL*CSVSCI
Trigger: TATACAGGAGACAGAGCATCAGAGCTCCAGAGACAA...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGACCAATGCTTGGGCTATaGAACAACCCAGTGACCATA +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGPMLGL*NNPVTI
Trigger: TATGGTCACTGGGTTGTTTCATAGCCCAAGCATTGG...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGAGGACAGCCACATCATaGTGGACAGGGTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKRTATS*WTGLRS
Trigger: TGACCTCAACCCTGTCCATCATGATGTGGCTGTCCT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGATGGGTGTCTCATTTTTaGAGGACCAGGCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARWVSHF*RTRQVM
Trigger: CATTACCTGCCTGGTCCTTCAAAAATGAGACACCCA...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCAGTTGTACTGTTTTCTaGGGGGATGCAATGAATGGT +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETSCTVF*GDAMNG
Trigger: ACCATTCATTGCATCCCCTCAGAAAACAGTACAACT...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAGTGTCTGGCAGAAGCTaGTTGAAAGTCTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARVSGRS*LKVCPS
Trigger: TGAAGGACAGACTTTCAATCAGCTTCTGCCAGACAC...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGATCCTCGGTCAGTGGATaGTTTTTAACAGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARSSVSG*FLTGSM
Trigger: CATCGAGCCTGTTAAAAAGCATCCACTGACCGAGGA...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTGTGACCAAGTTCATGTaGAATGGTGAAAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTVTKFM*NGESQG
Trigger: CCCCTGGCTTTCACCATTGCACATGAACTTGGTCAC...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGACAGAATATCTCTGTTaGAGGAAACCAGTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLTEYLC*RKPVLW
Trigger: CCAAAGCACTGGTTTCCTGCAACAGAGATATTCTGT...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGACCATCCCATCCCATTTaGGTCTTCTTGGGATGCTAT +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGPSHPI*VFLGCY
Trigger: ATAGCATCCCAAGAAGACGCAAATGGGATGGGATGG...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCAACTGCTGTTTTCTTTaGCTCTGGGTGTGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLNCCFL*LWVWML
Trigger: CAGCATCCACACCCAGAGGCAAAGAAAACAGCAGTT...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAACTGGACTCACTATGTaGTATTCTGGCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARTGLTM*YSGRDL
Trigger: CAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCCCTTCCTCGGTCAGTaGATGCTTTTTAACAGGCTC +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTPFLGQ*MLFNRL
Trigger: GAGCCTGTTAAAAAGCATCCACTGACCGAGGAAGGG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCGAACCACAACAATGTaGACTAGATTGCCAATGCTT +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETRTTTM*TRLPML
Trigger: AAGCATTGGCAATCTAGTCCACATTGTTGTGGTTCG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGCAGAATGTAGCATTTaGGCCATATTGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLAECSI*AILELA
Trigger: TGCCAGCTCCAATATGGCCCAAATGCTACATTCTGC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCCTTTCCTGTCATACTaGAAAACGGTCCCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTPFLSY*KTVPAS
Trigger: ACTGGCAGGGACCGTTTTCCAGTATGACAGGAAAGG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGCTGGGCTGTGTTTCTaGGTTACAGAAGGTCGTTTT +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGAGLCF*VTEGRF
Trigger: AAAACGACCTTCTGTAACCCAGAAACACAGCCCAGC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGACAGTCCTTTTCATaGCACTTCTTCTGTCTCACG +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGQSFS*HFFCLT
Trigger: CGTGAGACAGAAGAAGTGCCATGAAAAGGACTGTCC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCCTGGATGTTGGTGCTaGGATGGGCTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFPGCWC*DGLEGV
Trigger: GACCCCTTCAAGCCCATCCCAGCACCAACATCCAGG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGACCTCGGCAATCAGATTaGAGGCATCTTCTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: CHLLGISTKFNSTILLNGPRQSD*RHLLQS
Trigger: TGACTGAAGAAGATGCCTCCAATCTGATTGCCGAGG...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTGTTTTCTTTGCCTCTaGGTGTGGATGCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKCFLCL*VWMLGA
Trigger: GGCGCCCAGCATCCACACCCAGAGGCAAAGAAAACA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTATCTCACAAGGGCGATTaGCACCAGCACAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLSHKGD*HQHRCP
Trigger: AGGACATCTGTGCTGGTGTCAATCGCCCTTGTGAGA...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGTGGATGCCGAAGCTGTaGCCAAGTTCATGTGCAATG +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKWMPKL*PSSCAM
Trigger: CATTGCACATGAACTTGGTCACAGCTTCGGCATCCA...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTACTGAAGGGAGGCCATaGGGGCTCTTCCCCCATATA +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFTEGRP*GLFPHI
Trigger: TATATGGGGGAAGAGCCCTCATGGCCTCCCTTCAGT...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTTTCCATCATGCTGGATaGCGAAGCTGTGACCAAGTT +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTFHHAG*RSCDQV
Trigger: AACTTGGTCACAGCTTCGGCATCCAGCATGATGGAA...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGATCAAATTCACTGCACTaGATCTGCCGGAAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARSNSLH*ICRKVG
Trigger: TCCAACTTTCCGGCAGATGCAGTGCAGTGAATTTGA...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCAGCTCACAAGGATGTaGTGCATTAAACACTGGGAA +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLQLTRM*CIKHWE
Trigger: TTCCCAGTGTTTAATGCAGCACATCCTTGTGAGCTG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAGTTCATCTATGGGTCTaGAGTACAGCTCACAAGGAT +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARVHLWV*STAHKD
Trigger: ATCCTTGTGAGCTGTACTGCAGACCCATAGATGAAC...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCGATCTGTGGTCATGGTaGTATAAAATGGAGTTACCT +
Preference number: 4 (lower is better)
Translates to: SQKVLHWEASEDMLSQETDLWSW*YKMELP
Trigger: AGGTAACTCCATTTTATAGCACCATGACCACAGATC...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGCAGGGCACAGTGGTTaGAGGCCTTTTTGTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFAGHSG*RPFCPV
Trigger: GACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGAGCAAAGGTGTCTGTTaGAGGGCACAGTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKSKGVC*RAQWLQ
Trigger: CTGCAACCACTGTGCCCTGCAACAGACACCTTTGCT...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCCTTTAATCCACAGATaGGCTCCTTTGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTPLIHR*APLSLE
Trigger: CTCCAGAGACAAAGGAGCCCATCTGTGGATTAAAGG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGCCACCTTCGAAGCATaGGGTGCCATCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFATFEA*GAINDS
Trigger: GCTGTCATTGATGGCACCCCATGCTTCGAAGGTGGC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGTCTTCTGTCTCACGCTaGGCTGTGTTTCTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKSSVSR*AVFLGY
Trigger: GTAACCCAGAAACACAGCCCAGCGTGAGACAGAAGA...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTCTGAGGTTGCTGGATaGTGGTCTCCTGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFSEVAG*WSPARG
Trigger: CCCTCTTGCAGGAGACCACCATCCAGCAACCTCAGA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCTTCCATTTTTGTACTaGAGGGAGGCCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKLPFLY*REAMRA
Trigger: AGCCCTCATGGCCTCCCTTCAGTACAAAAATGGAAG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAACTTCAAGCCTTTCTTaGTGGGGATATCATCAAGAC +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARTSSLS*WGYHQD
Trigger: GTCTTGATGATATCCCCAGCAAGAAAGGCTTGAAGT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTTGGTTCTGGGTTGTTaGAGAGCCTCTCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFLVLGC*RASLRS
Trigger: AGAGCGCAGAGAGGCTCTGCAACAACCCAGAACCAA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCAGGAAATTGCCAGCTaGCTTGATTTCCATCACCCT +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKQEIAS*LDFHHP
Trigger: AGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGTCCAGCGGCCAAATTaGCAGAAGTACAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLVQRPN*QKYSNF
Trigger: GAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGAC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAAGCCCATGGTCTGGATaGACAGCACCGTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLSPWSG*TAPFSF
Trigger: AAAAGAGAACGGTGCTGTGCATCCAGACCATGGGCT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGTTGCAGGAAACCAGTaGTTTGGGCTTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFVAGNQ*FGLQQV
Trigger: CACCTGCTGAAGCCCAAAGCACTGGTTTCCTGCAAC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTATGGATGGTGGTCTCCTaGAAGAGGGAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLWMVVS*KREWNL
Trigger: AAGATTCCACTCCCTCTTGCAGGAGACCACCATCCA...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTAATCCAGTCAGTCCTTaGCAGGCACTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFNPVSP*QALRAA
Trigger: AGCAGCTCTCAGTGCCTGCCAAGGACTGACTGGATT...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCCATTTGCGTCTTCTTaGGATGCTATGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKPFASS*DAMVEP
Trigger: TGGCTCCACCATAGCATCCCAAGAAGACGCAAATGG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGACTATTTTCAATCCTTaGTCCTCTTCTTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLTIFNP*SSSSSR
Trigger: TCTACTTGAAGAAGAGGAGCAAGGATTGAAAATAGT...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGTTTTCTTTCTCCGGTaGAGTATTTCCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLVFFLR*SISLQI
Trigger: AATTTGGAGGGAAATACTGCACCGGAGAAAGAAAAC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTCACTGCACTGCATCTaGCGGAAAGTTGGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFSLHCI*RKVGVS
Trigger: AGACACTCCAACTTTCCGGCAGATGCAGTGCAGTGA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTAGACATTTCTGCTGTTaGCACCTTCGAAGCATGGGG +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFRHFCC*HLRSMG
Trigger: CCCCATGCTTCGAAGGTGGCAACAGCAGAAATGTCT...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTGCAGGCTTGCTGGTTaGATGTTTGGAATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFCRLAG*MFGILG
Trigger: CCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCCACTATGTGGTATTCTaGCAGGGACTTGATAAAATG +
Preference number: 4 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLHYVVF*QGLDKM
Trigger: CATTTTATCAAGTCCCTGCCAGAATACCACATAGTG...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTACATTTTCCACTTCCTaGCAGAATGTAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTTFSTS*QNVAFG
Trigger: CCCAAATGCTACATTCTGCCAGGAAGTGGAAAATGT...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGTCCAAATTTTGGTTCTaGGTTGTTGCAGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKSKFWF*VVAEPL
Trigger: GAGAGGCTCTGCAACAACCCAGAACCAAAATTTGGA...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAGTATGCAGGGCTGTaGTCCTTCATAAGATGCTTG +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKQYAGL*SFIRCL
Trigger: CAAGCATCTTATGAAGGACCACAGCCCTGCATACTG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGCATGTTTGGAATTCTaGGGGTTTGACTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKACLEF*GFDLMV
Trigger: GACCATCAAGTCAAACCCCCAGAATTCCAAACATGC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATGGATTTCAGTGTCTaGCAGAAGCTGATTGAAAGT +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARMDFSV*QKLIES
Trigger: ACTTTCAATCAGCTTCTGCCAGACACTGAAATCCAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTTACTCCAGGAGCAATaGCGTTGGACTTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFLLQEQ*RWTSSL
Trigger: AAGGCTTGAAGTCCAACGTCATTGCTCCTGGAGTAA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR GCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCTGTGTCAAATTCACTaGACTGCATCTGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFLCQIH*TASAGK
Trigger: CTTTCCGGCAGATGCAGTGCAGTGAATTTGACACAG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTGAGCTATATCTTTATTaGGTTTCAGAACTCTACGGC +
Preference number: 4 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTELYLY*VSELYG
Trigger: GCCGTAGAGTTCTGAAACCCAATAAAGATATAGCTC...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCCACTTCTGGATCTGTaGTCATGGTGCTATAAAATG +
Preference number: 4 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKPLLDL*SWCYKM
Trigger: CATTTTATAGCACCATGACCACAGATCCAGAAGTGG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTGCTGGTTGCATGTTTaGAATTCTGGGGGTTTGACT +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKCWLHV*NSGGLT
Trigger: AGTCAAACCCCCAGAATTCCAAACATGCAACCAGCA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTATTCCTGCAGGCTTGCTaGTTGCATGTTTGGAATTCT +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLFLQAC*LHVWNS
Trigger: AGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAA...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCAGAGGCACTGGTCTTaGTCTTCAGTTGTACTGTTT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFQRHWS*SSVVLF
Trigger: AAACAGTACAACTGAAGATCAAGACCAGTGCCTCTG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTCTCCATGTGGTAGATaGAAAAATCCAGTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKSPCGR*KNPVSP
Trigger: AGGACTGACTGGATTTTTCCATCTACCACATGGAGA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGTCAAGCCTTTCTTGCTaGGGATATCATCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKSSLSC*GYHQDR
Trigger: TCTGTCTTGATGATATCCCCAGCAAGAAAGGCTTGA...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAATTGATTTTTCCCACTaGGAGCTATATCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: ISCTSETGGRSRMKHLARIDFSH*ELYLYW
Trigger: CCAATAAAGATATAGCTCCCAGTGGGAAAAATCAAT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTGAGCCCTCTTCAGCTTaGGTTGAATTATTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFEPSSA*VELFCH
Trigger: ATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTC...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAACAGGCCCAAAGCCTTaGGTTGGATTTGTAGTATTT +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLTGPKP*VGFVVF
Trigger: AAATACTACAAATCCAACCCAAGGCTTTGGGCCTGT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR TCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCTTCTTCAAGTAGAATaGGCCGAACCACAACAATGT +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFLLQVE*AEPQQC
Trigger: ACATTGTTGTGGTTCGGCTCATTCTACTTGAAGAAG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTAAAACTGTTCATCTATaGGTCTGCAGTACAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFKTVHL*VCSTAH
Trigger: GTGAGCTGTACTGCAGACCCATAGATGAACAGTTTT...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCTGGATCTGTGGTCATaGTGCTATAAAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKLDLWS*CYKMEL
Trigger: TAACTCCATTTTATAGCACCATGACCACAGATCCAG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAAATGCCAATTTGTCATaGTTTTCTAACTTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLNANLS*FSNFSE
Trigger: CTCAGAGAAGTTAGAAAACCATGACAAATTGGCATT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CCA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTATGGATTTGTAGTATTTaGCAATGCCAATTTGTCATG +
Preference number: 4 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLWICSI*QCQFVM
Trigger: CATGACAAATTGGCATTGCCAAATACTACAAATCCA...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp CAGGCACTGAGAGCTGCTGTCCCGATCCCGACTGTGGTGCCCTGCTaGAGAACTGTGCCCCTGAGATGGCAGGGCTGGCCTGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QALRAAVPIPTVVPC*RTVPLRWQGWPEEA
Trigger: GGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCTCAGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp TGGCAGGCACTGAGAGCTGCTGTCCCGATCCCGACTGTGGTGCCCTaGTGCAGAACTGTGCCCCTGAGATGGCAGGGCTGGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: WQALRAAVPIPTVVP*CRTVPLRWQGWPEE
Trigger: TTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCTCAGTGCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TCGCCAGCCAGCACAGGGGCGGAGGTGGCACTTCTTAGCAGGGTCTaGCCTCTGAATGGTTGTGCAGTCAGCGTCCACCCCAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: SPASTGAEVALLSRV*PLNGCAVSVHPRAA
Trigger: TGCAGCTCTGGGGTGGACGCTGACTGCACAACCATTCAGAGGCCAGACCCTGCTAAGAAGTGCCACCTCCGCCCCTGTGCTGGCTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp CCAGCACAGGGGCGGAGGTGGCACTTCTTAGCAGGGTCTGGCCTCTaGATGGTTGTGCAGTCAGCGTCCACCCCAGAGCTGCACTCCACA +
Preference number: 5 (lower is better)
Translates to: PAQGRRWHFLAGSGL*MVVQSASTPELHST
Trigger: TGTGGAGTGCAGCTCTGGGGTGGACGCTGACTGCACAACCATTCAGAGGCCAGACCCTGCTAAGAAGTGCCACCTCCGCCCCTGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp CCGATCCCGACTGTGGTGCCCTGCTGCAGAACTGTGCCCCTGAGATaGCAGGGCTGGCCTGAGGAAGCCACCATCTTAACATGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PIPTVVPCCRTVPLR*QGWPEEATILTWER
Trigger: CCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TCGTGTCGGCCACCACGAGGGTCTCCACCCATCTCTCCTTGCTTATaGAACGTCGGGAGAGGCTTCTGCTCCGCAAGGTTTTCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SCRPPRGSPPISPCL*NVGRGFCSARFSSP
Trigger: GGGAGAGGAAAACCTTGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGACCCTCGTGGTGGCCGACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp CCACCACAGGAAGTGTTACACAGCTCCCAGTTCCCAGTGGCCCAGTaGCAGCAAAGGTGTCTGTTGCAGGGCACAGTGGTTGCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PPQEVLHSSQFPVAQ*QQRCLLQGTVVAGL
Trigger: AAGGCCTGCAACCACTGTGCCCTGCAACAGACACCTTTGCTGTCACTGGGCCACTGGGAACTGGGAGCTGTGTAACACTTCCTGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GATGCTGGGCGCCTGTGGACACGAGAGACAGCACTGGGCTCGCACTaGTGGCACAGAGCACTTCCTCATGGATTTCAGTGTCTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: DAGRLWTRETALGSH*WHRALPHGFQCLAE
Trigger: TTCTGCCAGACACTGAAATCCATGAGGAAGTGCTCTGTGCCATCAGTGCGAGCCCAGTGCTGTCTCTCGTGTCCACAGGCGCCCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TCCCAGTGGCCCAGTGACAGCAAAGGTGTCTGTTGCAGGGCACAGTaGTTGCAGGCCTTTTTGTCCAGTCACAGAGGCCTCCAGGACAAG +
Preference number: 5 (lower is better)
Translates to: SQWPSDSKGVCCRAQ*LQAFLSSHRGLQDK
Trigger: CTTGTCCTGGAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCAACAGACACCTTTGCTGTCACTGGGCCACTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GGTGCCCTGCTGCAGAACTGTGCCCCTGAGATGGCAGGGCTGGCCTaGGGAAGCCACCATCTTAACATGGGAAAGGTTCCCATATCTCTT +
Preference number: 5 (lower is better)
Translates to: GALLQNCAPEMAGLA*GSHHLNMGKVPISL
Trigger: AAGAGATATGGGAACCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GTGTGGACAGTGGCGTGGGCCTGGATGTTGGTGCTGGGATGGGCTTaGAGGGGTCATGTTCTGCTGTCGATTGATTTTTCCCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: VWTVAWAWMLVLGWA*RGHVLLSIDFSHWE
Trigger: CTCCCAGTGGGAAAAATCAATCGACAGCAGAACATGACCCCTTCAAGCCCATCCCAGCACCAACATCCAGGCCCACGCCACTGTCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp AGTGGCCCAGTGACAGCAAAGGTGTCTGTTGCAGGGCACAGTGGTTaGAGGCCTTTTTGTCCAGTCACAGAGGCCTCCAGGACAAGACAC +
Preference number: 5 (lower is better)
Translates to: SGPVTAKVSVAGHSG*RPFCPVTEASRTRH
Trigger: GTGTCTTGTCCTGGAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCAACAGACACCTTTGCTGTCACTGGGCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp CATGATTTTGGAGCAACTGCTGTTTTCTTTGCCTCTGGGTGTGGATaGTGGGCGCCTGTGGACACGAGAGACAGCACTGGGCTCGCACTG +
Preference number: 5 (lower is better)
Translates to: HDFGATAVFFASGCG*WAPVDTRDSTGLAL
Trigger: CAGTGCGAGCCCAGTGCTGTCTCTCGTGTCCACAGGCGCCCAGCATCCACACCCAGAGGCAAAGAAAACAGCAGTTGCTCCAAAATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ACTGTGGTGCCCTGCTGCAGAACTGTGCCCCTGAGATGGCAGGGCTaGCCTGAGGAAGCCACCATCTTAACATGGGAAAGGTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: TVVPCCRTVPLRWQG*PEEATILTWERFPY
Trigger: ATATGGGAACCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp TCTCCACCCATCTCTCCTTGCTTATGGAACGTCGGGAGAGGCTTCTaGTCCGCAAGGTTTTCCTCTCCCACTTCTCCCGCTGTAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SPPISPCLWNVGRGF*SARFSSPTSPAVAL
Trigger: AAGAGCTACAGCGGGAGAAGTGGGAGAGGAAAACCTTGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp CCTCCAAATTTTGGTTCTGGGTTGTTGCAGAGCCTCTCTGCGCTCTaGGCTCCTGCCCCACATGTTCTAGAACAGTGTGACCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PPNFGSGLLQSLSAL*APAPHVLEQCDQGD
Trigger: GTCACCCTGGTCACACTGTTCTAGAACATGTGGGGCAGGAGCTCAGAGCGCAGAGAGGCTCTGCAACAACCCAGAACCAAAATTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp TTCTTCATGCGAAATTCTGTAGTACAGCTGGTCCCCAGAACCACCTaGAGCTCTCTTCTTCCTGCTGCTAGTGACAGGGTGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FFMRNSVVQLVPRTT*SSLLPAASDRVMQA
Trigger: GGCCTGCATCACCCTGTCACTAGCAGCAGGAAGAAGAGAGCTGCAGGTGGTTCTGGGGACCAGCTGTACTACAGAATTTCGCATGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp GCATCTGCCGGAAAGTTGGAGTGTCTGAGCGGCAGGGGTGGACATTaGATAAGCGATAGCGTTTTCTTTCTCCGGTGCAGTATTTCCCTC +
Preference number: 5 (lower is better)
Translates to: ASAGKLECLSGRGGH*ISDSVFFLRCSISL
Trigger: GAGGGAAATACTGCACCGGAGAAAGAAAACGCTATCGCTTATGCAATGTCCACCCCTGCCGCTCAGACACTCCAACTTTCCGGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp CACAATGAGCAGCCTGCCGGCGGATACCTGTTCCACACGTTACACTaGATTCTGTCCAGCGGCCAAATTGCCAGAAGTACAGCAACTTCT +
Preference number: 5 (lower is better)
Translates to: HNEQPAGGYLFHTLH*ILSSGQIARSTATS
Trigger: AGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGGAACAGGTATCCGCCGGCAGGCTGCTCATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GAAGTCACGGGGACCTGGGAAGTGCTTCCAGAAGAAGTAGGGAAGTaGGAGCCCTCTTCAGCTTGGGTTGAATTATTCTGCCATCCCATC +
Preference number: 5 (lower is better)
Translates to: EVTGTWEVLPEEVGK*EPSSAWVELFCHPI
Trigger: GATGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCTTCTGGAAGCACTTCCCAGGTCCCCGTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCTGGCCTCTGAATGGTaGTGCAGTCAGCGTCCACCC +
Preference number: 5 (lower is better)
Translates to: SQKVLHWEASEDMLSQETLASEW*CSQRPP
Trigger: GGGTGGACGCTGACTGCACAACCATTCAGAGGCCAG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGGCTCCAGGGCTCCACTaGCCATTCTCCACAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLAPGLH*PFSTRL
Trigger: GAGCCTTGTGGAGAATGGCAAGTGGAGCCCTGGAGC...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp TACTCCTTGCTGCATTTCGACCATGTTAGTGGAGTTGGGTCGTACTaGATCTGTTGGGACATGATGTATGGGTGCCTGCCCACGGGCTCA +
Preference number: 5 (lower is better)
Translates to: YSLLHFDHVSGVGSY*ICWDMMYGCLPTGS
Trigger: TGAGCCCGTGGGCAGGCACCCATACATCATGTCCCAACAGATTCAGTACGACCCAACTCCACTAACATGGTCGAAATGCAGCAAGGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp GCTATATCTTTATTGGGTTTCAGAACTCTACGGCTAAATGGGCACTaGTGGAGGCCGCACAGAGCTCGACTGTTGGGTTTCCGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: AISLLGFRTLRLNGH*WRPHRARLLGFRVL
Trigger: CAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAATAAAGATATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ATGGCCACCAGCATCGACTTGGACTGGACTCACTATGTGGTATTCTaGCAGGGACTTGATAAAATGTTCTTGCCTCGGGTCTGGGAAGCG +
Preference number: 5 (lower is better)
Translates to: MATSIDLDWTHYVVF*QGLDKMFLPRVWEA
Trigger: CGCTTCCCAGACCCGAGGCAAGAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TCTTTCCGGACTGTGTACTCATACTTGATACCAGGGTTAGTCACCTaGAAAAGTAGCTGGAGCCACACTGACTCGTTGGTGGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SFRTVYSYLIPGLVT*KSSWSHTDSLVGPG
Trigger: TCCAGGCCCCACCAACGAGTCAGTGTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACACAGTCCGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ACTGGGAGCTATATCTTTATTGGGTTTCAGAACTCTACGGCTAAATaGGCACTGCTGGAGGCCGCACAGAGCTCGACTGTTGGGTTTCCG +
Preference number: 5 (lower is better)
Translates to: TGSYIFIGFQNSTAK*ALLEAAQSSTVGFP
Trigger: CGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAATAAAGATATAGCTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGCCACGATCGAGAGCTaGGCCAGCCAGCTCCCCCGA +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKATIES*ASQLPR
Trigger: TCGGGGGAGCTGGCTGGCCAAGCTCTCGATCGTGGC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GACTGTCCTTTAATCCACAGATGGGCTCCTTTGTCTCTGGAGCTCTaGTGCTCTGTCTCCTGTATACGACATGAGGGTAGGACCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DCPLIHRWAPLSLEL*CSVSCIRHEGRTLP
Trigger: AGGAAGGGTCCTACCCTCATGTCGTATACAGGAGACAGAGCATCAGAGCTCCAGAGACAAAGGAGCCCATCTGTGGATTAAAGGACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp TTACAGAAGGTCGTTTTCACTATACCGTGGCCCTTCTTGACACAATaGGCAGCCTGCCGGCGGATACCTGTTCCACACGTTACACTGCAT +
Preference number: 5 (lower is better)
Translates to: LQKVVFTIPWPFLTQ*AACRRIPVPHVTLH
Trigger: ATGCAGTGTAACGTGTGGAACAGGTATCCGCCGGCAGGCTGCTCATTGTGTCAAGAAGGGCCACGGTATAGTGAAAACGACCTTCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp TTTCTGGGTTACAGAAGGTCGTTTTCACTATACCGTGGCCCTTCTTaGCACAATGAGCAGCCTGCCGGCGGATACCTGTTCCACACGTTA +
Preference number: 5 (lower is better)
Translates to: FLGYRRSFSLYRGPS*HNEQPAGGYLFHTL
Trigger: TAACGTGTGGAACAGGTATCCGCCGGCAGGCTGCTCATTGTGTCAAGAAGGGCCACGGTATAGTGAAAACGACCTTCTGTAACCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GCTTCCAGAAGAAGTAGGGAAGTGGGAGCCCTCTTCAGCTTGGGTTaGATTATTCTGCCATCCCATCCCATTTGCGTCTTCTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: ASRRSREVGALFSLG*IILPSHPICVFLGC
Trigger: GCATCCCAAGAAGACGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCTTCTGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ATATCTTTATTGGGTTTCAGAACTCTACGGCTAAATGGGCACTGCTaGAGGCCGCACAGAGCTCGACTGTTGGGTTTCCGGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ISLLGFRTLRLNGHC*RPHRARLLGFRVLS
Trigger: TGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAATAAAGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp ACACCAGCACAGATGTCCTTTCTGGTGATAAGGACAGCCACATCATaGTGGACAGGGTTGAGGTCACTCTTGGGATTGATGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: TPAQMSFLVIRTATS*WTGLRSLLGLMLFC
Trigger: GCAGAAGAGCATCAATCCCAAGAGTGACCTCAACCCTGTCCATCATGATGTGGCTGTCCTTATCACCAGAAAGGACATCTGTGCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GACAGAACATGGCCACCAGCATCGACTTGGACTGGACTCACTATGTaGTATTCTGGCAGGGACTTGATAAAATGTTCTTGCCTCGGGTCT +
Preference number: 5 (lower is better)
Translates to: DRTWPPASTWTGLTM*YSGRDLIKCSCLGS
Trigger: AGACCCGAGGCAAGAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GTGTACTCATACTTGATACCAGGGTTAGTCACCTGGAAAAGTAGCTaGAGCCACACTGACTCGTTGGTGGGGCCTGGAGCTATAAGTTTC +
Preference number: 5 (lower is better)
Translates to: VYSYLIPGLVTWKSS*SHTDSLVGPGAISF
Trigger: GAAACTTATAGCTCCAGGCCCCACCAACGAGTCAGTGTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GTCCTTTTCATGGCACTTCTTCTGTCTCACGCTGGGCTGTGTTTCTaGGTTACAGAAGGTCGTTTTCACTATACCGTGGCCCTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: VLFMALLLSHAGLCF*VTEGRFHYTVALLD
Trigger: GTCAAGAAGGGCCACGGTATAGTGAAAACGACCTTCTGTAACCCAGAAACACAGCCCAGCGTGAGACAGAAGAAGTGCCATGAAAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ATCAGCACTCTTCCTGCAGGCTTGCTGGTTGCATGTTTGGAATTCTaGGGGTTTGACTTGATGGTCACAGAGGCACTGGTCTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: ISTLPAGLLVACLEF*GFDLMVTEALVLIF
Trigger: GAAGATCAAGACCAGTGCCTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAAGAGTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGTCCTACAGGGATGGAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGCTAACTTCTCTGAGGTaGCTGGATGGTGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPTGMERRLSPIDSNIFLLTSLR*LDGGLL
Trigger: CAGGAGACCACCATCCAGCAACCTCAGAGAAGTTAG...CAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTCCATCCCTGTAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GGTTGCTGGATGGTGGTCTCCTGCAAGAGGGAGTGGAATCTTCCTTaGTTTTTCAGCGATCATCCCATCATCCCTGGGTGTCTCATTTTT +
Preference number: 5 (lower is better)
Translates to: GCWMVVSCKREWNLP*FFSDHPIIPGCLIF
Trigger: AAAAATGAGACACCCAGGGATGATGGGATGATCGCTGAAAAATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCATCCAGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp TCTTCCTGCAGGCTTGCTGGTTGCATGTTTGGAATTCTGGGGGTTTaGCTTGATGGTCACAGAGGCACTGGTCTTGATCTTCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSCRLAGCMFGILGV*LDGHRGTGLDLQLY
Trigger: GTACAACTGAAGATCAAGACCAGTGCCTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp ATACCTGTTCCACACGTTACACTGCATTCTGTCCAGCGGCCAAATTaGCAGAAGTACAGCAACTTCTCCACGTCATTGTCAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: IPVPHVTLHSVQRPN*QKYSNFSTSLSRPS
Trigger: AGATGGCCTTGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGGAACAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp ATGCAGGCCATAGGACAGAACATGGCCACCAGCATCGACTTGGACTaGACTCACTATGTGGTATTCTGGCAGGGACTTGATAAAATGTTC +
Preference number: 5 (lower is better)
Translates to: MQAIGQNMATSIDLD*THYVVFWQGLDKMF
Trigger: GAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTCCTATGGCCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GCTTGGGTTGAATTATTCTGCCATCCCATCCCATTTGCGTCTTCTTaGGATGCTATGGTGGAGCCAAGGCTGTTGATTGTGGGAGTACTT +
Preference number: 5 (lower is better)
Translates to: AWVELFCHPIPFASS*DAMVEPRLLIVGVL
Trigger: AAGTACTCCCACAATCAACAGCCTTGGCTCCACCATAGCATCCCAAGAAGACGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GAAGTAGGACCTATAGCTGAGCTGGAAACATTCTCATCATCAGGTTaGATACTCAAAGACCAGGAAGTCACGGGGACCTGGGAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: EVGPIAELETFSSSG*ILKDQEVTGTWEVL
Trigger: AAGCACTTCCCAGGTCCCCGTGACTTCCTGGTCTTTGAGTATCCAACCTGATGATGAGAATGTTTCCAGCTCAGCTATAGGTCCTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GCTTGTAATCAGAAGCATTTAGCAAAAACCCCTCGGCAATCAGATTaGAGGCATCTTCTTCAGTCAGGACAGGCCCAAAGCCTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ACNQKHLAKTPRQSD*RHLLQSGQAQSLGL
Trigger: CAACCCAAGGCTTTGGGCCTGTCCTGACTGAAGAAGATGCCTCCAATCTGATTGCCGAGGGGTTTTTGCTAAATGCTTCTGATTACAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGTCTCACAAGGGCGATaGACACCAGCACAGATGTCC +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLVSQGR*TPAQMS
Trigger: GGACATCTGTGCTGGTGTCAATCGCCCTTGTGAGAC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCTAATGGCCAGGAAATaGCCAGCTGCCTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: SQKVLHWEASEDMLSQETLMARK*PAALIS
Trigger: GGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGAGGGCCCACATGTCGTaGAACACGCTTCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKRAHMS*NTLPTP
Trigger: GGGAGTGGGAAGCGTGTTCAACGACATGTGGGCCCT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGACCCATTTGCGTCTTCTaGGGATGCTATGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: ISCTSETGGRSRMKHLARPICVF*GCYGGA
Trigger: GGCTCCACCATAGCATCCCAAGAAGACGCAAATGGG...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCCCCCCATATAAGATGTaGGTGGAGGTCCAAGTGGTA +
Preference number: 5 (lower is better)
Translates to: SQKVLHWEASEDMLSQETPPYKM*VEVQVV
Trigger: TACCACTTGGACCTCCACCAACATCTTATATGGGGG...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCTGGTTGCAGGCCTTTTaGTCCAGTCACAGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLWLQAF*SSHRGL
Trigger: GAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCA...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GGAGCTGGCACTGGTGATGAACATCGTAAATTACTCCAGGAGCAATaGCGTTGGACTTCAAGCCTTTCTTGCTGGGGATATCATCAAGAC +
Preference number: 5 (lower is better)
Translates to: GAGTGDEHRKLLQEQ*RWTSSLSCWGYHQD
Trigger: GTCTTGATGATATCCCCAGCAAGAAAGGCTTGAAGTCCAACGTCATTGCTCCTGGAGTAATTTACGATGTTCATCACCAGTGCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp AGAGTTGCTTTTGTCCTTGTTCAAAGGCTGGTCACTGTCTTCCCCTaGACCACTATGTATCTCCACTTCTGGATCTGTGGTCATGGTGCT +
Preference number: 5 (lower is better)
Translates to: RVAFVLVQRLVTVFP*TTMYLHFWICGHGA
Trigger: AGCACCATGACCACAGATCCAGAAGTGGAGATACATAGTGGTTCAGGGGAAGACAGTGACCAGCCTTTGAACAAGGACAAAAGCAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTTCCACCCATCTCTCCTaGCTTATGGAACGTCGGGAG +
Preference number: 5 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTSTHLS*LMERRE
Trigger: CTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGA...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGACAGACATTTCTGCTGTaGCCACCTTCGAAGCATGGG +
Preference number: 5 (lower is better)
Translates to: ISCTSETGGRSRMKHLARQTFLL*PPSKHG
Trigger: CCCATGCTTCGAAGGTGGCAACAGCAGAAATGTCTG...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCACAGAGCTCGACTGTaGGGTTTCCGGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTHRARL*GFRVLS
Trigger: TGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp GTTGGTGCTGGGATGGGCTTGAAGGGGTCATGTTCTGCTGTCGATTaGTTTTTCCCACTGGGAGCTATATCTTTATTGGGTTTCAGAACT +
Preference number: 5 (lower is better)
Translates to: VGAGMGLKGSCSAVD*FFPLGAISLLGFRT
Trigger: AGTTCTGAAACCCAATAAAGATATAGCTCCCAGTGGGAAAAATCAATCGACAGCAGAACATGACCCCTTCAAGCCCATCCCAGCACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp GTATTTTTCCGGATCTTCACTCCTAATGGCCAGGAAATTGCCAGCTaGCTTGATTTCCATCACCCTTATATCCCTCGCACCTTTGGGAAT +
Preference number: 5 (lower is better)
Translates to: VFFRIFTPNGQEIAS*LDFHHPYIPRTFGN
Trigger: ATTCCCAAAGGTGCGAGGGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAGGAGTGAAGATCCGGAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TATGGGTCTGCAGTACAGCTCACAAGGATGTGCTGCATTAAACACTaGGAACCAGCGGTAGAATTGGTTTTTGTAGGGGACTGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: YGSAVQLTRMCCIKH*EPAVELVFVGDCVK
Trigger: TTTGACACAGTCCCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACATCCTTGTGAGCTGTACTGCAGACCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp GCTCGCACTGATGGCACAGAGCACTTCCTCATGGATTTCAGTGTCTaGCAGAAGCTGATTGAAAGTCTGTCCTTCAAGCAAGTTAAATCA +
Preference number: 5 (lower is better)
Translates to: ARTDGTEHFLMDFSV*QKLIESLSFKQVKS
Trigger: TGATTTAACTTGCTTGAAGGACAGACTTTCAATCAGCTTCTGCCAGACACTGAAATCCATGAGGAAGTGCTCTGTGCCATCAGTGCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGCTCATTAAGGTTCTaGGCACATGTGACACTGCGA +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGSLRF*AHVTLR
Trigger: TCGCAGTGTCACATGTGCCAAGAACCTTAATGAGCC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGGTGCTGGGATGGGCTaGAAGGGGTCATGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLGAGMG*KGSCSA
Trigger: AGCAGAACATGACCCCTTCAAGCCCATCCCAGCACC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGTGCAGGGCACAGTGGTaGCAGGCCTTTTTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKCRAQW*QAFLSS
Trigger: ACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCA...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 90 bp ATGGCACAGAGCACTTCCTCATGGATTTCAGTGTCTGGCAGAAGCTaGTTGAAAGTCTGTCCTTCAAGCAAGTTAAATCAGCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: MAQSTSSWISVSGRS*LKVCPSSKLNQHSS
Trigger: GGAAGAGTGCTGATTTAACTTGCTTGAAGGACAGACTTTCAATCAGCTTCTGCCAGACACTGAAATCCATGAGGAAGTGCTCTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp AAACTGTTCATCTATGGGTCTGCAGTACAGCTCACAAGGATGTGCTaGATTAAACACTGGGAACCAGCGGTAGAATTGGTTTTTGTAGGG +
Preference number: 5 (lower is better)
Translates to: KLFIYGSAVQLTRMC*IKHWEPAVELVFVG
Trigger: CCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACATCCTTGTGAGCTGTACTGCAGACCCATAGATGAACAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 90 bp TATGCCATTAATACAGACATTTCTGCTGTTGCCACCTTCGAAGCATaGGGTGCCATCAATGACAGCTTCCAGCATTCTCTCAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: YAINTDISAVATFEA*GAINDSFQHSLRKL
Trigger: CAGTTTTCTGAGAGAATGCTGGAAGCTGTCATTGATGGCACCCCATGCTTCGAAGGTGGCAACAGCAGAAATGTCTGTATTAATGGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGAAATCCAGTCAGTCCTaGGCAGGCACTGAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKKSSQS*AGTESC
Trigger: GCAGCTCTCAGTGCCTGCCAAGGACTGACTGGATTT...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTATGCTCTTCTGCCACTaGCAGAAACTGGACAGTGTC +
Preference number: 5 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTMLFCH*QKLDSV
Trigger: GACACTGTCCAGTTTCTGCAAGTGGCAGAAGAGCAT...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGGGTTGAGGTCACTCTaGGGATTGATGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKGLRSL*GLMLFC
Trigger: GCAGAAGAGCATCAATCCCAAGAGTGACCTCAACCC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGAGCACTCACTCCAGTaGCCTACTGTCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKEHSLQ*PTVQSD
Trigger: ATCAGACTGGACAGTAGGCAACTGGAGTGAGTGCTC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTACAATTTCGGGAGCACTaGCTCCAGTTTCCCACTCGC +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLQFREH*LQFPTR
Trigger: GCGAGTGGGAAACTGGAGCAAGTGCTCCCGAAATTG...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTACAGCAAAGGTGTCTGTaGCAGGGCACAGTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLQQRCL*QGTVVA
Trigger: TGCAACCACTGTGCCCTGCAACAGACACCTTTGCTG...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGATTGCTGGTTGCATGTTaGGAATTCTGGGGGTTTGAC +
Preference number: 5 (lower is better)
Translates to: ISCTSETGGRSRMKHLARLLVAC*EFWGFD
Trigger: GTCAAACCCCCAGAATTCCAAACATGCAACCAGCAA...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 90 bp AAGTTTCTCCAGATCTCCTTTCCTGTCATACTGGAAAACGGTCCCTaGCAGTTTATAGTTTCCATTCCACTGGATAATGAACCCTCCGTT +
Preference number: 5 (lower is better)
Translates to: KFLQISFPVILENGP*QFIVSIPLDNEPSV
Trigger: AACGGAGGGTTCATTATCCAGTGGAATGGAAACTATAAACTGGCAGGGACCGTTTTCCAGTATGACAGGAAAGGAGATCTGGAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GAGAGAAGACTGAGCCCCATAGATAGCAACATTTTCCTGTCCTTATTGACTACTCTAGATTGCCAATGCTaGGGCTATGAAACAACCCAG +
Preference number: 5 (lower is better)
Translates to: ERRLSPIDSNIFLSLLTTLDCQC*GYETTQ
Trigger: CTGGGTTGTTTCATAGCCCAAGCATTGGCAATCTAG...AGTAGTCAATAAGGACAGGAAAATGTTGCTATCTATGGGGCTCAGTCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTTTTGGTTCTGGGTTGTaGCAGAGCCTCTCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFFGSGL*QSLSAL
Trigger: GAGCGCAGAGAGGCTCTGCAACAACCCAGAACCAAA...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp ATTTCCTGTACTTCAGAAACTGGAGGAAGATCTAGAATGAAGCACCTGGCCAGAACTGTGTACTCATACTaGATACCAGGGTTAGTCACC +
Preference number: 5 (lower is better)
Translates to: ISCTSETGGRSRMKHLARTVYSY*IPGLVT
Trigger: GGTGACTAACCCTGGTATCAAGTATGAGTACACAGT...TCTGGCCAGGTGCTTCATTCTAGATCTTCCTCCAGTTTCTGAAGTACAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGAACTTCTCCACGTCATaGTCAAGGCCATCTTTCCGG +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKNFSTS*SRPSFR
Trigger: CCGGAAAGATGGCCTTGACAATGACGTGGAGAAGTT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGAGGAGTGGAATCTTCCTaGATTTTTCAGCGATCATCC +
Preference number: 5 (lower is better)
Translates to: CHLLGISTKFNSTILLNGGVESS*IFQRSS
Trigger: GGATGATCGCTGAAAAATCAAGGAAGATTCCACTCC...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGACTCTTCCTGCAGGCTaGCTGGTTGCATGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKTLPAG*LVACLE
Trigger: TTCCAAACATGCAACCAGCAAGCCTGCAGGAAGAGT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TGCCACCTTCTAGGTATTAGCACCAAGTTCAATAGCACCATTCTGCTGAATGGATATTCTGGCAGGGACTaGATAAAATGTTCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: CHLLGISTKFNSTILLNGYSGRD*IKCSCL
Trigger: GAGGCAAGAACATTTTATCAAGTCCCTGCCAGAATA...TCCATTCAGCAGAATGGTGCTATTGAACTTGGTGCTAATACCTAGAAGGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAAGGTCACTCTTGGGATaGATGCTCTTCTGCCACTTG +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLRSLLG*MLFCHL
Trigger: CAAGTGGCAGAAGAGCATCAATCCCAAGAGTGACCT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGGTCGTACTGAATCTGTaGGGACATGATGTATGGGTG +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKVVLNL*GHDVWV
Trigger: CACCCATACATCATGTCCCAACAGATTCAGTACGAC...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCCAGGAGCAATGACGTaGGACTTCAAGCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKPGAMT*DFKPFL
Trigger: CAAGAAAGGCTTGAAGTCCAACGTCATTGCTCCTGG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAAATTTTGGTTCTGGGTaGTTGCAGAGCCTCTCTGCG +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLNFGSG*LQSLSA
Trigger: CGCAGAGAGGCTCTGCAACAACCCAGAACCAAAATT...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCATTTCCCTCCAAATTTaGGTTCTGGGTTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLISLQI*VLGCCR
Trigger: TCTGCAACAACCCAGAACCAAAATTTGGAGGGAAAT...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCAAATTGCCAGCTGCCTaGATTTCCATCACCCTTATA +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLKLPAA*ISITLI
Trigger: TATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTT...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTATGTCCAGCGGCCAAATaGCCAGAAGTACAGCAACTT +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLCPAAK*PEVQQL
Trigger: AAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACA...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TTACAGCCTTGCACAACTATGCTAAATGTGCATTCAACCCTAGCTCCATACCTCGGAGCTATATCTTTATaGGGTTTCAGAACTCTACGG +
Preference number: 5 (lower is better)
Translates to: LQPCTTMLNVHSTLAPYLGAISL*GFRTLR
Trigger: CCGTAGAGTTCTGAAACCCAATAAAGATATAGCTCC...GAGGTATGGAGCTAGGGTTGAATGCACATTTAGCATAGTTGTGCAAGGCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGAGCCAGAATCACTTGTaGTGGTTGCCCAAAAGTCAC +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKSQNHL*WLPKSH
Trigger: GTGACTTTTGGGCAACCACAACAAGTGATTCTGGCT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGCTGGGTGTCTCATTTTaGAAGGACCAGGCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKLGVSF*KDQAGN
Trigger: ATTACCTGCCTGGTCCTTCAAAAATGAGACACCCAG...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TCTCAAAAAGTATTGCACTGGGAAGCCAGTGAAGACATGCTGTCTCAGGAGACCTTTGGCAATGCCAATTaGTCATGGTTTTCTAACTTC +
Preference number: 5 (lower is better)
Translates to: SQKVLHWEASEDMLSQETFGNAN*SWFSNF
Trigger: GAAGTTAGAAAACCATGACAAATTGGCATTGCCAAA...GGTCTCCTGAGACAGCATGTCTTCACTGGCTTCCCAGTGCAATACTTTTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCCCTCGGCAATCAGATaGGAGGCATCTTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFPSAIR*EASSSV
Trigger: GACTGAAGAAGATGCCTCCAATCTGATTGCCGAGGG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCGAGTGATGTACTCCTaGCTGCATTTCGACCATGTT +
Preference number: 5 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKRVMYS*LHFDHV
Trigger: AACATGGTCGAAATGCAGCAAGGAGTACATCACTCG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCCTCTTCAGCTTGGGTaGAATTATTCTGCCATCCCA +
Preference number: 5 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKPLQLG*NYSAIP
Trigger: TGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGG...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp CATACACAGGACTCTAGTGTCATGTACTTTACTCTAGAACAGTACCAGCTTAAGATCACAGAGTTGCTTTaGTCCTTGTTCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: HTQDSSVMYFTLEQYQLKITELL*SLFKGW
Trigger: CCAGCCTTTGAACAAGGACAAAAGCAACTCTGTGAT...CTTAAGCTGGTACTGTTCTAGAGTAAAGTACATGACACTAGAGTCCTGTGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGGACAGGCCCAAAGCCTaGGGTTGGATTTGTAGTATT +
Preference number: 5 (lower is better)
Translates to: RSVCALVRKNYDYSHKVKDRPKA*GWICSI
Trigger: AATACTACAAATCCAACCCAAGGCTTTGGGCCTGTC...CTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACAGACACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGACTTCAAGCCTTTCTaGCTGGGGATATCATCAAGA +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLDFKPF*LGISSR
Trigger: TCTTGATGATATCCCCAGCAAGAAAGGCTTGAAGTC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp GTATACGTATGCATGAATGTTTCTAGAGACCAAAGTTACAGCCTTGCACAACTAGGTCTTGATCTTCAGTaGTACTGTTTTCTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VYVCMNVSRDQSYSLAQLGLDLQ*YCFLRG
Trigger: TCCCCTCAGAAAACAGTACAACTGAAGATCAAGACC...TAGTTGTGCAAGGCTGTAACTTTGGTCTCTAGAAACATTCATGCATACGTATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS-3UTR CAA 90 bp TGTGCTCTTGTTAGGAAGAACTATGACTATTCCCACAAAGTAAAGCAATCCTTTCACAGAATATCTCTGTaGCAGGAAACCAGTGCTTTG +
Preference number: 5 (lower is better)
Translates to: CALVRKNYDYSHKVKQSFHRISL*QETSAL
Trigger: CAAAGCACTGGTTTCCTGCAACAGAGATATTCTGTG...AAAGGATTGCTTTACTTTGTGGGAATAGTCATAGTTCTTCCTAACAAGAGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp AGAGCTGCTGTCCCGATCCCGACTGTGGTGCCCTGCTaGAGAACTGTGCCCCTGAGATGGCAGGGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RAAVPIPTVVPC*RTVPLRWQGWP
Trigger: AGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp CTGAGAGCTGCTGTCCCGATCCCGACTGTGGTGCCCTaGTGCAGAACTGTGCCCCTGAGATGGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LRAAVPIPTVVP*CRTVPLRWQGW
Trigger: CCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp GGGCGGAGGTGGCACTTCTTAGCAGGGTCTGGCCTCTaGATGGTTGTGCAGTCAGCGTCCACCCCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: GRRWHFLAGSGL*MVVQSASTPEL
Trigger: CAGCTCTGGGGTGGACGCTGACTGCACAACCATTCAGAGGCCAGACCCTGCTAAGAAGTGCCACCTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp AGCACAGGGGCGGAGGTGGCACTTCTTAGCAGGGTCTaGCCTCTGAATGGTTGTGCAGTCAGCGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: STGAEVALLSRV*PLNGCAVSVHP
Trigger: GGGGTGGACGCTGACTGCACAACCATTCAGAGGCCAGACCCTGCTAAGAAGTGCCACCTCCGCCCCTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GTGTCGGCCACCACGAGGGTCTCCACCCATCTCTCCTaGCTTATGGAACGTCGGGAGAGGCTTCTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: VSATTRVSTHLS*LMERRERLLLR
Trigger: GCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGACCCTCGTGGTGGCCGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp TGTCGGCCACCACGAGGGTCTCCACCCATCTCTCCTTaGTTATGGAACGTCGGGAGAGGCTTCTGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: CRPPRGSPPISP*LWNVGRGFCSA
Trigger: TGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGACCCTCGTGGTGGCCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TGGATGCTGGGCGCCTGTGGACACGAGAGACAGCACTaGGCTCGCACTGATGGCACAGAGCACTTCCTCATG +
Preference number: 6 (lower is better)
Translates to: WMLGACGHERQH*ARTDGTEHFLM
Trigger: CATGAGGAAGTGCTCTGTGCCATCAGTGCGAGCCCAGTGCTGTCTCTCGTGTCCACAGGCGCCCAGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp GAAAAATCCAGTCAGTCCTTGGCAGGCACTGAGAGCTaGTGTCCCGATCCCGACTGTGGTGCCCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: EKSSQSLAGTES*CPDPDCGALLQ
Trigger: CTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCTCAGTGCCTGCCAAGGACTGACTGGATTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp GGAGCAACTGCTGTTTTCTTTGCCTCTGGGTGTGGATaGTGGGCGCCTGTGGACACGAGAGACAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: GATAVFFASGCG*WAPVDTRDSTG
Trigger: CCCAGTGCTGTCTCTCGTGTCCACAGGCGCCCAGCATCCACACCCAGAGGCAAAGAAAACAGCAGTTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCCTGCTGCAGAACTGTGCCCCTGAGATGGCAGGGCTaGCCTGAGGAAGCCACCATCTTAACATGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: PCCRTVPLRWQG*PEEATILTWER
Trigger: CCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp ACTGTGGTGCCCTGCTGCAGAACTGTGCCCCTGAGATaGCAGGGCTGGCCTGAGGAAGCCACCATCTTAACA +
Preference number: 6 (lower is better)
Translates to: TVVPCCRTVPLR*QGWPEEATILT
Trigger: TGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp CTGCAGAACTGTGCCCCTGAGATGGCAGGGCTGGCCTaGGGAAGCCACCATCTTAACATGGGAAAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: LQNCAPEMAGLA*GSHHLNMGKVP
Trigger: GGGAACCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCATCTCAGGGGCACAGTTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCACCACGAGGGTCTCCACCCATCTCTCCTTGCTTATaGAACGTCGGGAGAGGCTTCTGCTCCGCAAGGTTT +
Preference number: 6 (lower is better)
Translates to: PPRGSPPISPCL*NVGRGFCSARF
Trigger: AAACCTTGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGACCCTCGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TGGCAGGGACTTGATAAAATGTTCTTGCCTCGGGTCTaGGAAGCGAACCGGCCAGGGCTGAGTTTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: WQGLDKMFLPRV*EANRPGLSLSP
Trigger: GGGAGACAAACTCAGCCCTGGCCGGTTCGCTTCCCAGACCCGAGGCAAGAACATTTTATCAAGTCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp ATGGTGAGGATGTACGACTCCACGTTCTCGCTTCCATaGTACTCTACCGTCTTCGTGTCGGCCACCACGAGG +
Preference number: 6 (lower is better)
Translates to: MVRMYDSTFSLP*YSTVFVSATTR
Trigger: CCTCGTGGTGGCCGACACGAAGACGGTAGAGTACCATGGAAGCGAGAACGTGGAGTCGTACATCCTCACCAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TCCCCTGCCCACCACCTGGGTGGACAGTCCTTTTCATaGCACTTCTTCTGTCTCACGCTGGGCTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SPAHHLGGQSFS*HFFCLTLGCVS
Trigger: AGAAACACAGCCCAGCGTGAGACAGAAGAAGTGCCATGAAAAGGACTGTCCACCCAGGTGGTGGGCAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TTGGGTTTCAGAACTCTACGGCTAAATGGGCACTGCTaGAGGCCGCACAGAGCTCGACTGTTGGGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: LGFRTLRLNGHC*RPHRARLLGFR
Trigger: CCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCCAGTGACAGCAAAGGTGTCTGTTGCAGGGCACAGTaGTTGCAGGCCTTTTTGTCCAGTCACAGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: PSDSKGVCCRAQ*LQAFLSSHRGL
Trigger: GAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCAACAGACACCTTTGCTGTCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp AATGGGCACTGCTGGAGGCCGCACAGAGCTCGACTGTaGGGTTTCCGGGTCTTGTCACAAGGCTCATTAAGG +
Preference number: 6 (lower is better)
Translates to: NGHCWRPHRARL*GFRVLSQGSLR
Trigger: CCTTAATGAGCCTTGTGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GGTGTCTGTTGCAGGGCACAGTGGTTGCAGGCCTTTTaGTCCAGTCACAGAGGCCTCCAGGACAAGACACTC +
Preference number: 6 (lower is better)
Translates to: GVCCRAQWLQAF*SSHRGLQDKTL
Trigger: GAGTGTCTTGTCCTGGAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCAACAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp CACTGCTGGAGGCCGCACAGAGCTCGACTGTTGGGTTTCCGGGTCTaGTCACAAGGCTCATTAAGGTTCTTGGCACATGTGACACTGCGA +
Preference number: 6 (lower is better)
Translates to: HCWRPHRARLLGFRV*SQGSLRFLAHVTLR
Trigger: TCGCAGTGTCACATGTGCCAAGAACCTTAATGAGCCTTGTGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp CTACGGCTAAATGGGCACTGCTGGAGGCCGCACAGAGCTCGACTGTaGGGTTTCCGGGTCTTGTCACAAGGCTCATTAAGGTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LRLNGHCWRPHRARL*GFRVLSQGSLRFLA
Trigger: TGCCAAGAACCTTAATGAGCCTTGTGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp GACAGCAAAGGTGTCTGTTGCAGGGCACAGTGGTTGCAGGCCTTTTaGTCCAGTCACAGAGGCCTCCAGGACAAGACACTCCTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: DSKGVCCRAQWLQAF*SSHRGLQDKTLLSP
Trigger: AGGAGAGAGGAGTGTCTTGTCCTGGAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACTGTGCCCTGCAACAGACACCTTTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp GTGGCGTGGGCCTGGATGTTGGTGCTGGGATGGGCTTaGAGGGGTCATGTTCTGCTGTCGATTGATTTTTCC +
Preference number: 6 (lower is better)
Translates to: VAWAWMLVLGWA*RGHVLLSIDFS
Trigger: GGAAAAATCAATCGACAGCAGAACATGACCCCTTCAAGCCCATCCCAGCACCAACATCCAGGCCCACGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp CTCAGGCTCCGGTGGTGGTCCAGGCTGTCCATGCACTaGACCTCACGAATCTTGAAGCCTCCACTGCAATTT +
Preference number: 6 (lower is better)
Translates to: LRLRWWSRLSMH*TSRILKPPLQF
Trigger: AAATTGCAGTGGAGGCTTCAAGATTCGTGAGGTTCAGTGCATGGACAGCCTGGACCACCACCGGAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp ATCTCTCCTTGCTTATGGAACGTCGGGAGAGGCTTCTaGTCCGCAAGGTTTTCCTCTCCCACTTCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: ISPCLWNVGRGF*SARFSSPTSPA
Trigger: AGCGGGAGAAGTGGGAGAGGAAAACCTTGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp CAGCCTGCCGGCGGATACCTGTTCCACACGTTACACTaGATTCTGTCCAGCGGCCAAATTGCCAGAAGTACA +
Preference number: 6 (lower is better)
Translates to: QPAGGYLFHTLH*ILSSGQIARST
Trigger: TGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGGAACAGGTATCCGCCGGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CCCCTGCCTCGGTCCAAGAAGCGAGTGATGTACTCCTaGCTGCATTTCGACCATGTTAGTGGAGTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: PLPRSKKRVMYS*LHFDHVSGVGS
Trigger: CGACCCAACTCCACTAACATGGTCGAAATGCAGCAAGGAGTACATCACTCGCTTCTTGGACCGAGGCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp GTCGTTTTCACTATACCGTGGCCCTTCTTGACACAATaGGCAGCCTGCCGGCGGATACCTGTTCCACACGTT +
Preference number: 6 (lower is better)
Translates to: VVFTIPWPFLTQ*AACRRIPVPHV
Trigger: AACGTGTGGAACAGGTATCCGCCGGCAGGCTGCTCATTGTGTCAAGAAGGGCCACGGTATAGTGAAAACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GGTTGGATACTCAAAGACCAGGAAGTCACGGGGACCTaGGAAGTGCTTCCAGAAGAAGTAGGGAAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GWILKDQEVTGT*EVLPEEVGKWE
Trigger: CTCCCACTTCCCTACTTCTTCTGGAAGCACTTCCCAGGTCCCCGTGACTTCCTGGTCTTTGAGTATCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CAGGCCATAGGACAGAACATGGCCACCAGCATCGACTaGGACTGGACTCACTATGTGGTATTCTGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: QAIGQNMATSID*DWTHYVVFWQG
Trigger: TCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTCCTATGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp AGGCCGCACAGAGCTCGACTGTTGGGTTTCCGGGTCTaGTCACAAGGCTCATTAAGGTTCTTGGCACATGTG +
Preference number: 6 (lower is better)
Translates to: RPHRARLLGFRV*SQGSLRFLAHV
Trigger: CACATGTGCCAAGAACCTTAATGAGCCTTGTGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp AGGGAGGCCATGAGGGCTCTTCCCCCATATAAGATGTaGGTGGAGGTCCAAGTGGTAGTTCTGCATCCGTCT +
Preference number: 6 (lower is better)
Translates to: REAMRALPPYKM*VEVQVVVLHPS
Trigger: AGACGGATGCAGAACTACCACTTGGACCTCCACCAACATCTTATATGGGGGAAGAGCCCTCATGGCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp GCATCGACTTGGACTGGACTCACTATGTGGTATTCTGGCAGGGACTaGATAAAATGTTCTTGCCTCGGGTCTGGGAAGCGAACCGGCCAG +
Preference number: 6 (lower is better)
Translates to: ASTWTGLTMWYSGRD*IKCSCLGSGKRTGQ
Trigger: CTGGCCGGTTCGCTTCCCAGACCCGAGGCAAGAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp TGTAGGGGACTGTGTCAAATTCACTGCACTGCATCTGCCGGAAAGTaGGAGTGTCTGAGCGGCAGGGGTGGACATTGCATAAGCGATAGC +
Preference number: 6 (lower is better)
Translates to: CRGLCQIHCTASAGK*ECLSGRGGHCISDS
Trigger: GCTATCGCTTATGCAATGTCCACCCCTGCCGCTCAGACACTCCAACTTTCCGGCAGATGCAGTGCAGTGAATTTGACACAGTCCCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp CGACTGTTGGGTTTCCGGGTCTTGTCACAAGGCTCATTAAGGTTCTaGGCACATGTGACACTGCGAATCCGCACTCCACCACCACAGGAA +
Preference number: 6 (lower is better)
Translates to: RLLGFRVLSQGSLRF*AHVTLRIRTPPPQE
Trigger: TTCCTGTGGTGGTGGAGTGCGGATTCGCAGTGTCACATGTGCCAAGAACCTTAATGAGCCTTGTGACAAGACCCGGAAACCCAACAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp CAAGACAGAACCCCCTGCCTCGGTCCAAGAAGCGAGTaGTGTACTCCTTGCTGCATTTCGACCATGTTAGTG +
Preference number: 6 (lower is better)
Translates to: QDRTPCLGPRSE*CTPCCISTMLV
Trigger: CACTAACATGGTCGAAATGCAGCAAGGAGTACATCACTCGCTTCTTGGACCGAGGCAGGGGGTTCTGTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp TACAGAAGGTCGTTTTCACTATACCGTGGCCCTTCTTaGCACAATGAGCAGCCTGCCGGCGGATACCTGTTC +
Preference number: 6 (lower is better)
Translates to: YRRSFSLYRGPS*HNEQPAGGYLF
Trigger: GAACAGGTATCCGCCGGCAGGCTGCTCATTGTGTCAAGAAGGGCCACGGTATAGTGAAAACGACCTTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp GGAAAGTTGGAGTGTCTGAGCGGCAGGGGTGGACATTaGATAAGCGATAGCGTTTTCTTTCTCCGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: GKLECLSGRGGH*ISDSVFFLRCS
Trigger: ACTGCACCGGAGAAAGAAAACGCTATCGCTTATGCAATGTCCACCCCTGCCGCTCAGACACTCCAACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp TTATTGGGTTTCAGAACTCTACGGCTAAATGGGCACTaGTGGAGGCCGCACAGAGCTCGACTGTTGGGTTTC +
Preference number: 6 (lower is better)
Translates to: LLGFRTLRLNGH*WRPHRARLLGF
Trigger: GAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GGGACCTGGGAAGTGCTTCCAGAAGAAGTAGGGAAGTaGGAGCCCTCTTCAGCTTGGGTTGAATTATTCTGC +
Preference number: 6 (lower is better)
Translates to: GTWEVLPEEVGK*EPSSAWVELFC
Trigger: GCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCTTCTGGAAGCACTTCCCAGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GACAATTGGGACAGCCCCAGAGTCTCACAAGGGCGATaGACACCAGCACAGATGTCCTTTCTGGTGATAAGG +
Preference number: 6 (lower is better)
Translates to: DNWDSPRVSQGR*TPAQMSFLVIR
Trigger: CCTTATCACCAGAAAGGACATCTGTGCTGGTGTCAATCGCCCTTGTGAGACTCTGGGGCTGTCCCAATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CTGTGTCAAATTCACTGCACTGCATCTGCCGGAAAGTaGGAGTGTCTGAGCGGCAGGGGTGGACATTGCATA +
Preference number: 6 (lower is better)
Translates to: LCQIHCTASAGK*ECLSGRGGHCI
Trigger: TATGCAATGTCCACCCCTGCCGCTCAGACACTCCAACTTTCCGGCAGATGCAGTGCAGTGAATTTGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GTCACCTGGAAAAGTAGCTGGAGCCACACTGACTCGTaGGTGGGGCCTGGAGCTATAAGTTTCTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: VTWKSSWSHTDS*VGPGAISFSRS
Trigger: AGATCTGGAGAAACTTATAGCTCCAGGCCCCACCAACGAGTCAGTGTGGCTCCAGCTACTTTTCCAGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GGTTTCCGGGTCTTGTCACAAGGCTCATTAAGGTTCTaGGCACATGTGACACTGCGAATCCGCACTCCACCA +
Preference number: 6 (lower is better)
Translates to: GFRVLSQGSLRF*AHVTLRIRTPP
Trigger: TGGTGGAGTGCGGATTCGCAGTGTCACATGTGCCAAGAACCTTAATGAGCCTTGTGACAAGACCCGGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GCGTCTTCTTGGGATGCTATGGTGGAGCCAAGGCTGTaGATTGTGGGAGTACTTGTGCTCATAGACTCAGGC +
Preference number: 6 (lower is better)
Translates to: ASSWDAMVEPRL*IVGVLVLIDSG
Trigger: GCCTGAGTCTATGAGCACAAGTACTCCCACAATCAACAGCCTTGGCTCCACCATAGCATCCCAAGAAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp CTCCAGTTGCCTACTGTCCAGTCTGATGGACACAGAATATCTCTGTaGCAGGAAACCAGTGCTTTGGGCTTCAGCAGGTGCTGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: LQLPTVQSDGHRISL*QETSALGFSRCWQS
Trigger: AGACTGCCAGCACCTGCTGAAGCCCAAAGCACTGGTTTCCTGCAACAGAGATATTCTGTGTCCATCAGACTGGACAGTAGGCAACTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp AGGGTGATGCAGGCCATAGGACAGAACATGGCCACCAGCATCGACTaGGACTGGACTCACTATGTGGTATTCTGGCAGGGACTTGATAAA +
Preference number: 6 (lower is better)
Translates to: RVMQAIGQNMATSID*DWTHYVVFWQGLDK
Trigger: TTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTCCTATGGCCTGCATCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp ATCCCATTTGCGTCTTCTTGGGATGCTATGGTGGAGCCAAGGCTGTaGATTGTGGGAGTACTTGTGCTCATAGACTCAGGCACTGTGGGT +
Preference number: 6 (lower is better)
Translates to: IPFASSWDAMVEPRL*IVGVLVLIDSGTVG
Trigger: ACCCACAGTGCCTGAGTCTATGAGCACAAGTACTCCCACAATCAACAGCCTTGGCTCCACCATAGCATCCCAAGAAGACGCAAATGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp CTGCATTTCGACCATGTTAGTGGAGTTGGGTCGTACTaGATCTGTTGGGACATGATGTATGGGTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LHFDHVSGVGSY*ICWDMMYGCLP
Trigger: GGGCAGGCACCCATACATCATGTCCCAACAGATTCAGTACGACCCAACTCCACTAACATGGTCGAAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp AGGACCAGGCAGGTAATGAGCCTTCCATTTTTGTACTaGAGGGAGGCCATGAGGGCTCTTCCCCCATATAAG +
Preference number: 6 (lower is better)
Translates to: RTRQVMSLPFLY*REAMRALPPYK
Trigger: CTTATATGGGGGAAGAGCCCTCATGGCCTCCCTTCAGTACAAAAATGGAAGGCTCATTACCTGCCTGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp CGGATCTTCACTCCTAATGGCCAGGAAATTGCCAGCTaGCTTGATTTCCATCACCCTTATATCCCTCGCACC +
Preference number: 6 (lower is better)
Translates to: RIFTPNGQEIAS*LDFHHPYIPRT
Trigger: GGTGCGAGGGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAGGAGTGAAGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GAGCGACAGAAGCCTTTCACCGAGCACCACAGTGTCTaGCAAACATTTTCCACTTCCTGGCAGAATGTAGCA +
Preference number: 6 (lower is better)
Translates to: ERQKPFTEHHSV*QTFSTSWQNVA
Trigger: TGCTACATTCTGCCAGGAAGTGGAAAATGTTTGCCAGACACTGTGGTGCTCGGTGAAAGGCTTCTGTCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp ATGGCACTTCTTCTGTCTCACGCTGGGCTGTGTTTCTaGGTTACAGAAGGTCGTTTTCACTATACCGTGGCC +
Preference number: 6 (lower is better)
Translates to: MALLLSHAGLCF*VTEGRFHYTVA
Trigger: GGCCACGGTATAGTGAAAACGACCTTCTGTAACCCAGAAACACAGCCCAGCGTGAGACAGAAGAAGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCAGAAGAAGTAGGGAAGTGGGAGCCCTCTTCAGCTTaGGTTGAATTATTCTGCCATCCCATCCCATTTGCG +
Preference number: 6 (lower is better)
Translates to: PEEVGKWEPSSA*VELFCHPIPFA
Trigger: CGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp ACTCCAGGAGCAATGACGTTGGACTTCAAGCCTTTCTaGCTGGGGATATCATCAAGACAGAACCCCCTGCCT +
Preference number: 6 (lower is better)
Translates to: TPGAMTLDFKPF*LGISSRQNPLP
Trigger: AGGCAGGGGGTTCTGTCTTGATGATATCCCCAGCAAGAAAGGCTTGAAGTCCAACGTCATTGCTCCTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CCTACTGTCCAGTCTGATGGACACAGAATATCTCTGTaGCAGGAAACCAGTGCTTTGGGCTTCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: PTVQSDGHRISL*QETSALGFSRC
Trigger: GCACCTGCTGAAGCCCAAAGCACTGGTTTCCTGCAACAGAGATATTCTGTGTCCATCAGACTGGACAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CAGCTTGGGTTGAATTATTCTGCCATCCCATCCCATTaGCGTCTTCTTGGGATGCTATGGTGGAGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: QLGLNYSAIPSH*RLLGMLWWSQG
Trigger: GCCTTGGCTCCACCATAGCATCCCAAGAAGACGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp GATGGTGGTCTCCTGCAAGAGGGAGTGGAATCTTCCTaGATTTTTCAGCGATCATCCCATCATCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: DGGLLQEGVESS*IFQRSSHHPWV
Trigger: CACCCAGGGATGATGGGATGATCGCTGAAAAATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp GATACCTGTTCCACACGTTACACTGCATTCTGTCCAGCGGCCAAATaGCCAGAAGTACAGCAACTTCTCCACGTCATTGTCAAGGCCATC +
Preference number: 6 (lower is better)
Translates to: DTCSTRYTAFCPAAK*PEVQQLLHVIVKAI
Trigger: GATGGCCTTGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGGAACAGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp AGAAGTAGGGAAGTGGGAGCCCTCTTCAGCTTGGGTTaGATTATTCTGCCATCCCATCCCATTTGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: RSREVGALFSLG*IILPSHPICVF
Trigger: GAAGACGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp ATGGTGGTCTCCTGCAAGAGGGAGTGGAATCTTCCTTaGTTTTTCAGCGATCATCCCATCATCCCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: MVVSCKREWNLP*FFSDHPIIPGC
Trigger: ACACCCAGGGATGATGGGATGATCGCTGAAAAATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp CCACACGTTACACTGCATTCTGTCCAGCGGCCAAATTaGCAGAAGTACAGCAACTTCTCCACGTCATTGTCA +
Preference number: 6 (lower is better)
Translates to: PHVTLHSVQRPN*QKYSNFSTSLS
Trigger: TGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp AAGTGGGAGCCCTCTTCAGCTTGGGTTGAATTATTCTaGCATCCCATCCCATTTGCGTCTTCTTGGGATGCT +
Preference number: 6 (lower is better)
Translates to: KWEPSSAWVELF*HPIPFASSWDA
Trigger: AGCATCCCAAGAAGACGCAAATGGGATGGGATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp ATAGGACAGAACATGGCCACCAGCATCGACTTGGACTaGACTCACTATGTGGTATTCTGGCAGGGACTTGAT +
Preference number: 6 (lower is better)
Translates to: IGQNMATSIDLD*THYVVFWQGLD
Trigger: ATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GAGCACCACAGTGTCTGGCAAACATTTTCCACTTCCTaGCAGAATGTAGCATTTGGGCCATATTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: EHHSVWQTFSTS*QNVAFGPYWSW
Trigger: CCAGCTCCAATATGGCCCAAATGCTACATTCTGCCAGGAAGTGGAAAATGTTTGCCAGACACTGTGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCTATAGCTGAGCTGGAAACATTCTCATCATCAGGTTaGATACTCAAAGACCAGGAAGTCACGGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: PIAELETFSSSG*ILKDQEVTGTW
Trigger: CCAGGTCCCCGTGACTTCCTGGTCTTTGAGTATCCAACCTGATGATGAGAATGTTTCCAGCTCAGCTATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TCCACACGTTACACTGCATTCTGTCCAGCGGCCAAATaGCCAGAAGTACAGCAACTTCTCCACGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: STRYTAFCPAAK*PEVQQLLHVIV
Trigger: GACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGCAGTGTAACGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp ATCAGCACTCTTCCTGCAGGCTTGCTGGTTGCATGTTaGGAATTCTGGGGGTTTGACTTGATGGTCACAGAG +
Preference number: 6 (lower is better)
Translates to: ISTLPAGLLVAC*EFWGFDLMVTE
Trigger: CTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAAGAGTGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp TCCACGTCATTGTCAAGGCCATCTTTCCGGACTGTGTACTCATACTaGATACCAGGGTTAGTCACCTGGAAAAGTAGCTGGAGCCACACT +
Preference number: 6 (lower is better)
Translates to: STSLSRPSFRTVYSY*IPGLVTWKSSWSHT
Trigger: AGTGTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACACAGTCCGGAAAGATGGCCTTGACAATGACGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp GTCCAGCGGCCAAATTGCCAGAAGTACAGCAACTTCTCCACGTCATaGTCAAGGCCATCTTTCCGGACTGTGTACTCATACTTGATACCA +
Preference number: 6 (lower is better)
Translates to: VQRPNCQKYSNFSTS*SRPSFRTVYSYLIP
Trigger: TGGTATCAAGTATGAGTACACAGTCCGGAAAGATGGCCTTGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp AGGTTGCTGGATGGTGGTCTCCTGCAAGAGGGAGTGGAATCTTCCTaGATTTTTCAGCGATCATCCCATCATCCCTGGGTGTCTCATTTT +
Preference number: 6 (lower is better)
Translates to: RLLDGGLLQEGVESS*IFQRSSHHPWVSHF
Trigger: AAAATGAGACACCCAGGGATGATGGGATGATCGCTGAAAAATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCATCCAGCAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp CAGCGATCATCCCATCATCCCTGGGTGTCTCATTTTTaGAGGACCAGGCAGGTAATGAGCCTTCCATTTTTG +
Preference number: 6 (lower is better)
Translates to: QRSSHHPWVSHF*RTRQVMSLPFL
Trigger: CAAAAATGGAAGGCTCATTACCTGCCTGGTCCTTCAAAAATGAGACACCCAGGGATGATGGGATGATCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp AGGCTTGCTGGTTGCATGTTTGGAATTCTGGGGGTTTaGCTTGATGGTCACAGAGGCACTGGTCTTGATCTT +
Preference number: 6 (lower is better)
Translates to: RLAGCMFGILGV*LDGHRGTGLDL
Trigger: AAGATCAAGACCAGTGCCTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp AGCATCGACTTGGACTGGACTCACTATGTGGTATTCTaGCAGGGACTTGATAAAATGTTCTTGCCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: SIDLDWTHYVVF*QGLDKMFLPRV
Trigger: GACCCGAGGCAAGAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TGGCCACCAGCATCGACTTGGACTGGACTCACTATGTaGTATTCTGGCAGGGACTTGATAAAATGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: WPPASTWTGLTM*YSGRDLIKCSC
Trigger: GCAAGAACATTTTATCAAGTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GTATACGACATGAGGGTAGGACCCTTCCTCGGTCAGTaGATGCTTTTTAACAGGCTCGATGAAAAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: VYDMRVGPFLGQ*MLFNRLDEKVS
Trigger: GGAGACTTTTTCATCGAGCCTGTTAAAAAGCATCCACTGACCGAGGAAGGGTCCTACCCTCATGTCGTATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GCAGTACAGCTCACAAGGATGTGCTGCATTAAACACTaGGAACCAGCGGTAGAATTGGTTTTTGTAGGGGAC +
Preference number: 6 (lower is better)
Translates to: AVQLTRMCCIKH*EPAVELVFVGD
Trigger: GTCCCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACATCCTTGTGAGCTGTACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp ACTGTGTACTCATACTTGATACCAGGGTTAGTCACCTaGAAAAGTAGCTGGAGCCACACTGACTCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: TVYSYLIPGLVT*KSSWSHTDSLV
Trigger: CACCAACGAGTCAGTGTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TATATCTTTATTGGGTTTCAGAACTCTACGGCTAAATaGGCACTGCTGGAGGCCGCACAGAGCTCGACTGTT +
Preference number: 6 (lower is better)
Translates to: YIFIGFQNSTAK*ALLEAAQSSTV
Trigger: AACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCCGTAGAGTTCTGAAACCCAATAAAGATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GAATTATTCTGCCATCCCATCCCATTTGCGTCTTCTTaGGATGCTATGGTGGAGCCAAGGCTGTTGATTGTG +
Preference number: 6 (lower is better)
Translates to: ELFCHPIPFASS*DAMVEPRLLIV
Trigger: CACAATCAACAGCCTTGGCTCCACCATAGCATCCCAAGAAGACGCAAATGGGATGGGATGGCAGAATAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TCTTCACTCCTAATGGCCAGGAAATTGCCAGCTGCCTaGATTTCCATCACCCTTATATCCCTCGCACCTTTG +
Preference number: 6 (lower is better)
Translates to: SSLLMARKLPAA*ISITLISLAPL
Trigger: CAAAGGTGCGAGGGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAGGAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp GCAAACATTTTCCACTTCCTGGCAGAATGTAGCATTTGGGCCATATaGGAGCTGGCACTGGTGATGAACATCGTAAATTACTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: ANIFHFLAECSIWAI*ELALVMNIVNYSRS
Trigger: GCTCCTGGAGTAATTTACGATGTTCATCACCAGTGCCAGCTCCAATATGGCCCAAATGCTACATTCTGCCAGGAAGTGGAAAATGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp CTCACAAGGATGTGCTGCATTAAACACTGGGAACCAGCGGTAGAATaGGTTTTTGTAGGGGACTGTGTCAAATTCACTGCACTGCATCTG +
Preference number: 6 (lower is better)
Translates to: LTRMCCIKHWEPAVE*VFVGDCVKFTALHL
Trigger: CAGATGCAGTGCAGTGAATTTGACACAGTCCCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACATCCTTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp TTTTCCGGATCTTCACTCCTAATGGCCAGGAAATTGCCAGCTGCCTaGATTTCCATCACCCTTATATCCCTCGCACCTTTGGGAATAAGT +
Preference number: 6 (lower is better)
Translates to: FSGSSLLMARKLPAA*ISITLISLAPLGIS
Trigger: ACTTATTCCCAAAGGTGCGAGGGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAGGAGTGAAGATCCGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp TGTTGGTGCTGGGATGGGCTTGAAGGGGTCATGTTCTGCTGTCGATaGATTTTTCCCACTGGGAGCTATATCTTTATTGGGTTTCAGAAC +
Preference number: 6 (lower is better)
Translates to: CWCWDGLEGVMFCCR*IFPTGSYIFIGFQN
Trigger: GTTCTGAAACCCAATAAAGATATAGCTCCCAGTGGGAAAAATCAATCGACAGCAGAACATGACCCCTTCAAGCCCATCCCAGCACCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp AGAATTGGTTTTTGTAGGGGACTGTGTCAAATTCACTaGACTGCATCTGCCGGAAAGTTGGAGTGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RIGFCRGLCQIH*TASAGKLECLS
Trigger: GCTCAGACACTCCAACTTTCCGGCAGATGCAGTGCAGTGAATTTGACACAGTCCCCTACAAAAACCAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp ATCTATGGGTCTGCAGTACAGCTCACAAGGATGTGCTaGATTAAACACTGGGAACCAGCGGTAGAATTGGTT +
Preference number: 6 (lower is better)
Translates to: IYGSAVQLTRMC*IKHWEPAVELV
Trigger: AACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACATCCTTGTGAGCTGTACTGCAGACCCATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp CCCCTGAACCACTATGTATCTCCACTTCTGGATCTGTaGTCATGGTGCTATAAAATGGAGTTACCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: PLNHYVSPLLDL*SWCYKMELPAK
Trigger: CTTGGCAGGTAACTCCATTTTATAGCACCATGACCACAGATCCAGAAGTGGAGATACATAGTGGTTCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TCATGGTTTTCTAACTTCTCTGAGGTTGCTGGATGGTaGTCTCCTGCAAGAGGGAGTGGAATCTTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: SWFSNFSEVAGW*SPARGSGIFLD
Trigger: ATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCATCCAGCAACCTCAGAGAAGTTAGAAAACCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp TTGTCATGGTTTTCTAACTTCTCTGAGGTTGCTGGATaGTGGTCTCCTGCAAGAGGGAGTGGAATCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LSWFSNFSEVAG*WSPARGSGIFL
Trigger: AAGGAAGATTCCACTCCCTCTTGCAGGAGACCACCATCCAGCAACCTCAGAGAAGTTAGAAAACCATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GAGGCATCTTCTTCAGTCAGGACAGGCCCAAAGCCTTaGGTTGGATTTGTAGTATTTGGCAATGCCAATTTG +
Preference number: 6 (lower is better)
Translates to: EASSSVRTGPKP*VGFVVFGNANL
Trigger: CAAATTGGCATTGCCAAATACTACAAATCCAACCCAAGGCTTTGGGCCTGTCCTGACTGAAGAAGATGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GATGGCACAGAGCACTTCCTCATGGATTTCAGTGTCTaGCAGAAGCTGATTGAAAGTCTGTCCTTCAAGCAA +
Preference number: 6 (lower is better)
Translates to: DGTEHFLMDFSV*QKLIESLSFKQ
Trigger: TTGCTTGAAGGACAGACTTTCAATCAGCTTCTGCCAGACACTGAAATCCATGAGGAAGTGCTCTGTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TTGTCAAGGCCATCTTTCCGGACTGTGTACTCATACTaGATACCAGGGTTAGTCACCTGGAAAAGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: LSRPSFRTVYSY*IPGLVTWKSSW
Trigger: CCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACACAGTCCGGAAAGATGGCCTTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CCAAATTGCCAGAAGTACAGCAACTTCTCCACGTCATaGTCAAGGCCATCTTTCCGGACTGTGTACTCATAC +
Preference number: 6 (lower is better)
Translates to: PNCQKYSNFSTS*SRPSFRTVYSY
Trigger: GTATGAGTACACAGTCCGGAAAGATGGCCTTGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TCAGCGATCATCCCATCATCCCTGGGTGTCTCATTTTaGAAGGACCAGGCAGGTAATGAGCCTTCCATTTTT +
Preference number: 6 (lower is better)
Translates to: SAIIPSSLGVSF*KDQAGNEPSIF
Trigger: AAAAATGGAAGGCTCATTACCTGCCTGGTCCTTCAAAAATGAGACACCCAGGGATGATGGGATGATCGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 90 bp TCATGTTCAGGTACCCCGATCTTATTCCATATCACAGAGTTGCTTTaGTCCTTGTTCAAAGGCTGGTCACTGTCTTCCCCTGAACCACTA +
Preference number: 6 (lower is better)
Translates to: SCSGTPILFHITELL*SLFKGWSLSSPEPL
Trigger: TAGTGGTTCAGGGGAAGACAGTGACCAGCCTTTGAACAAGGACAAAAGCAACTCTGTGATATGGAATAAGATCGGGGTACCTGAACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp TTCAAGCAAGTTAAATCAGCACTCTTCCTGCAGGCTTaGTGGTTGCATGTTTGGAATTCTGGGGGTTTGACT +
Preference number: 6 (lower is better)
Translates to: FKQVKSALFLQA*WLHVWNSGGLT
Trigger: AGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAAGAGTGCTGATTTAACTTGCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TTCCACTTCCTGGCAGAATGTAGCATTTGGGCCATATaGGAGCTGGCACTGGTGATGAACATCGTAAATTAC +
Preference number: 6 (lower is better)
Translates to: FHFLAECSIWAI*ELALVMNIVNY
Trigger: GTAATTTACGATGTTCATCACCAGTGCCAGCTCCAATATGGCCCAAATGCTACATTCTGCCAGGAAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp CCGATCTTATTCCATATCACAGAGTTGCTTTTGTCCTaGTTCAAAGGCTGGTCACTGTCTTCCCCTGAACCA +
Preference number: 6 (lower is better)
Translates to: PILFHITELLLS*FKGWSLSSPEP
Trigger: TGGTTCAGGGGAAGACAGTGACCAGCCTTTGAACAAGGACAAAAGCAACTCTGTGATATGGAATAAGATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp ACAACAATGTGGACTAGATTGCCAATGCTTGGGCTATaGAACAACCCAGTGACCATATTCATGATGGTGAGG +
Preference number: 6 (lower is better)
Translates to: TTMWTRLPMLGL*NNPVTIFMMVR
Trigger: CCTCACCATCATGAATATGGTCACTGGGTTGTTTCATAGCCCAAGCATTGGCAATCTAGTCCACATTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS TCA 72 bp ACTGGTGATGAACATCGTAAATTACTCCAGGAGCAATaGCGTTGGACTTCAAGCCTTTCTTGCTGGGGATAT +
Preference number: 6 (lower is better)
Translates to: TGDEHRKLLQEQ*RWTSSLSCWGY
Trigger: ATATCCCCAGCAAGAAAGGCTTGAAGTCCAACGTCATTGCTCCTGGAGTAATTTACGATGTTCATCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp GGACATTGCATAAGCGATAGCGTTTTCTTTCTCCGGTaGAGTATTTCCCTCCAAATTTTGGTTCTGGGTTGT +
Preference number: 6 (lower is better)
Translates to: GHCISDSVFFLR*SISLQILVLGC
Trigger: ACAACCCAGAACCAAAATTTGGAGGGAAATACTGCACCGGAGAAAGAAAACGCTATCGCTTATGCAATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp ATGTGCTGCATTAAACACTGGGAACCAGCGGTAGAATaGGTTTTTGTAGGGGACTGTGTCAAATTCACTGCA +
Preference number: 6 (lower is better)
Translates to: MCCIKHWEPAVE*VFVGDCVKFTA
Trigger: TGCAGTGAATTTGACACAGTCCCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTGTTTAATGCAGCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CAA 72 bp TATTTTTCCGGATCTTCACTCCTAATGGCCAGGAAATaGCCAGCTGCCTTGATTTCCATCACCCTTATATCC +
Preference number: 6 (lower is better)
Translates to: YFSGSSLLMARK*PAALISITLIS
Trigger: GGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCATTAGGAGTGAAGATCCGGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS GCA 72 bp CAGATCTCCTTTCCTGTCATACTGGAAAACGGTCCCTaGCAGTTTATAGTTTCCATTCCACTGGATAATGAA +
Preference number: 6 (lower is better)
Translates to: QISFPVILENGP*QFIVSIPLDNE
Trigger: TTCATTATCCAGTGGAATGGAAACTATAAACTGGCAGGGACCGTTTTCCAGTATGACAGGAAAGGAGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9
CDS CCA 72 bp GTTGGATTTGTAGTATTTGGCAATGCCAATTTGTCATaGTTTTCTAACTTCTCTGAGGTTGCTGGATGGTGG +
Preference number: 6 (lower is better)
Translates to: VGFVVFGNANLS*FSNFSEVAGWW
Trigger: CCACCATCCAGCAACCTCAGAGAAGTTAGAAAACCATGACAAATTGGCATTGCCAAATACTACAAATCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061318.9