RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAMTS10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024299

Ensembl transcript IDs: ENSMUST00000087623.13, ENSMUST00000172922.8, ENSMUST00000173013.8, ENSMUST00000173030.8, ENSMUST00000173241.8, ENSMUST00000173931.8, ENSMUST00000174348.8, ENSMUST00000234497.2, ENSMUST00000234715.2

Found 745 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTaGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGTG +
Preference number: 1 (lower is better)
Translates to: AARLQCTLEMAGRCG*CSALCAAAGRGHTV
Trigger: CACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 90 bp GATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTaGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACAC +
Preference number: 1 (lower is better)
Translates to: DGRKASVHSRDGWPV*LVQRTVRCCWPRPH
Trigger: GTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp CGAGATGGCTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTaGTGGCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTG +
Preference number: 1 (lower is better)
Translates to: RDGWPVWLVQRTVRC*WPRPHCVEHSPHSL
Trigger: CAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CCA 90 bp GATGGCTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTaGCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTC +
Preference number: 1 (lower is better)
Translates to: DGWPVWLVQRTVRCC*PRPHCVEHSPHSLV
Trigger: GACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CCA 90 bp TGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTaGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCG +
Preference number: 1 (lower is better)
Translates to: CMVDGRKASVHSRDG*PVWLVQRTVRCCWP
Trigger: CGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp GAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTaGCCACTCAGGAGGGCACATTGGGCCTTGGCAGGCCTCCAGCAC +
Preference number: 1 (lower is better)
Translates to: ETRPTAWGTLRPVEG*PLRRAHWALAGLQH
Trigger: GTGCTGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 90 bp AGTGCCAGGAGTAGGGAGGCAGTGCATCCCGGGCAATGGGTGCATTaGAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCA +
Preference number: 1 (lower is better)
Translates to: SARSREAVHPGQWVH*SGSGEQATLPGPAP
Trigger: TGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCCATTGCCCGGGATGCACTGCCTCCCTACTCCTGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp GGCATAGTGCCAGGAGTAGGGAGGCAGTGCATCCCGGGCAATGGGTaGATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GIVPGVGRQCIPGNG*IEAVVESRQLCLGQ
Trigger: CTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCCATTGCCCGGGATGCACTGCCTCCCTACTCCTGGCACTATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp GGCTGCAGGAAGGCAGTGCCCAGGGGGCAGAGTAGATCGTTGATCTaGACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACA +
Preference number: 1 (lower is better)
Translates to: GCRKAVPRGQSRSLI*TLTKDHSVAETRPT
Trigger: TGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAACGATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp CCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGCTaGATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGC +
Preference number: 1 (lower is better)
Translates to: PSPGGTTLSHLASHC*MVDGRKASVHSRDG
Trigger: GCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp GGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTaGTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGAT +
Preference number: 1 (lower is better)
Translates to: GPSPGGTTLSHLASH*CMVDGRKASVHSRD
Trigger: ATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 90 bp CAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCCGCTaGCACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCA +
Preference number: 1 (lower is better)
Translates to: QNPGPCHSLHACTRR*HKCPPCQGGRVFHP
Trigger: TGGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp TTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATaGTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGG +
Preference number: 1 (lower is better)
Translates to: LSSRRSEPRTLSQPT*LHSPLTQMSTVSGR
Trigger: CCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp GGCACACCACTGAGCGGCTACGCACACCAGCGTCACAGCTACGGCTaGAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTT +
Preference number: 1 (lower is better)
Translates to: GTPLSGYAHQRHSYG*SVTSFLQPNLVDMV
Trigger: AACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCGTAGCCGCTCAGTGGTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp AGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTaGAGGAAGGCAGTGCCCAGGGGGCAGAGTAGATCGTTGATCTGC +
Preference number: 1 (lower is better)
Translates to: RAAAQVTSHSRWWLG*RKAVPRGQSRSLIC
Trigger: GCAGATCAACGATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 90 bp GCTGGGTCCTGCCCACGGGCCCCACAGCCGTTTCCCACGCCATCGTaGTTCATGCCAAATCTGAGGAGAAGAGTATCAGCTCTGCTAAGA +
Preference number: 1 (lower is better)
Translates to: AGSCPRAPQPFPTPS*FMPNLRRRVSALLR
Trigger: TCTTAGCAGAGCTGATACTCTTCTCCTCAGATTTGGCATGAATCACGATGGCGTGGGAAACGGCTGTGGGGCCCGTGGGCAGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR TCA 90 bp GGCACAGGAGTACCTCTCACTCCACAGGCTGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTGTATACTACATGGGGGCCACTCTCT +
Preference number: 1 (lower is better)
Translates to: GTGVPLTPQAVSRWG*RREERLYTTWGPLS
Trigger: AGAGAGTGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACAGCCTGTGGAGTGAGAGGTACTCCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 90 bp TGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTaGCCCCAATGGTTGGCCCCTTTGTCGATAGTGTGTGTTTGGCAC +
Preference number: 1 (lower is better)
Translates to: WCCRTGAFVSRPDST*PQWLAPLSIVCVWH
Trigger: GTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR CCA 90 bp CGACTACACGATGACCACACGAATGGATTAGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCTGGGTCCTGCCCACGGGCCCCACAG +
Preference number: 1 (lower is better)
Translates to: RLHDDHTNGLVFMVM*AAMSFAGSCPRAPQ
Trigger: CTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCTGCCCACATTACCATGAAGACTAATCCATTCGTGTGGTCATCGTGTAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CCA 90 bp CACCAGGGGGCAGTAAGCCACCTTGTTCACATCCTTGCATTCTTCTaGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACA +
Preference number: 1 (lower is better)
Translates to: HQGAVSHLVHILAFF*AISRRHHTVTLGLT
Trigger: TGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGAACAAGGTGGCTTACTGCCCCCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 90 bp AGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATaGTTGGCCCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCC +
Preference number: 1 (lower is better)
Translates to: RTGAFVSRPDSTCPQ*LAPLSIVCVWHSVP
Trigger: GGGAACACTGTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR CCA 90 bp CCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCACCCCTTAGTCAGGAGCCCTGTAGG +
Preference number: 1 (lower is better)
Translates to: PLSSLSTGQDTAEGP*VASSSPPLSQEPCR
Trigger: CCTACAGGGCTCCTGACTAAGGGGTGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 90 bp CCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTaGGCAATTTACTGTGGCCACTACAGTAGTGTGGGGCCACTGCTG +
Preference number: 1 (lower is better)
Translates to: PNLVDMVLCCRHAAS*AIYCGHYSSVGPLL
Trigger: CAGCAGTGGCCCCACACTACTGTAGTGGCCACAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 90 bp ACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGGTCCACCTTGCAGGGGTTCAATCAG +
Preference number: 1 (lower is better)
Translates to: TQRGTLVYYMGATLF*ATVTFGSTLQGFNQ
Trigger: CTGATTGAACCCCTGCAAGGTGGACCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 90 bp AGGGTGTTCCATCCACCACAGCTGCTGCTCGCTCCGTATAAAAGTTaGAGCCTTCTGCTAGGCAAGTCAGCGAACAGGCCTTCACACCCC +
Preference number: 1 (lower is better)
Translates to: RVFHPPQLLLAPYKS*SLLLGKSANRPSHP
Trigger: GGGGTGTGAAGGCCTGTTCGCTGACTTGCCTAGCAGAAGGCTTCAACTTTTATACGGAGCGAGCAGCAGCTGTGGTGGATGGAACACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 90 bp GACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTaGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACT +
Preference number: 1 (lower is better)
Translates to: DRAFGDPDDVLIPSS*QSWAKDTFNGLTGT
Trigger: AGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 90 bp GAACGCTTGTATACTACATGGGGGCCACTCTCTTCTGGGCCACGGTaGCCTTTGGGTCCACCTTGCAGGGGTTCAATCAGATACTCTTCA +
Preference number: 1 (lower is better)
Translates to: ERLYTTWGPLSSGPR*PLGPPCRGSIRYSS
Trigger: TGAAGAGTATCTGATTGAACCCCTGCAAGGTGGACCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCCCATGTAGTATACAAGCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 90 bp CAATCAGATACTCTTCATCATCTGCCACAATCAGGCCATGCTGGATaGGGGACAGAAAGCTCGGTTCAGGCTCTGGTATCCTGGACGCTC +
Preference number: 1 (lower is better)
Translates to: QSDTLHHLPQSGHAG*GTESSVQALVSWTL
Trigger: GAGCGTCCAGGATACCAGAGCCTGAACCGAGCTTTCTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 90 bp TGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTaGTGCACCGATTGCTCTTGCTCAGACACCACAGTTCACTGCAGA +
Preference number: 1 (lower is better)
Translates to: CVFGTVFPQQLGCYW*CTDCSCSDTTVHCR
Trigger: TCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 90 bp TGCAGCACATCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTaGGCACCAGGGGGCAGTAAGCCACCTTGTTCACATCCTTGCATT +
Preference number: 1 (lower is better)
Translates to: CSTSGGSRLGYRTEI*APGGSKPPCSHPCI
Trigger: AATGCAAGGATGTGAACAAGGTGGCTTACTGCCCCCTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGATGTGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp AGGGGTTCAATCAGATACTCTTCATCATCTGCCACAATCAGGCCATaGTGGATGGGGGACAGAAAGCTCGGTTCAGGCTCTGGTATCCTG +
Preference number: 1 (lower is better)
Translates to: RGSIRYSSSSATIRP*WMGDRKLGSGSGIL
Trigger: CAGGATACCAGAGCCTGAACCGAGCTTTCTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATTGAACCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 90 bp CCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCACCGATTGCTCTTGCTCAGACACCA +
Preference number: 1 (lower is better)
Translates to: PFVDSVCLAQCSLSS*DAIGDAPIALAQTP
Trigger: TGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 90 bp TGTGCACAAGCCAGAGGAGGACATGGGAGGTCCCCTGTTACTTTCTaGTTTATCTCCTCCAGACTGGATTTCTCACTGAATCTGGGGCTT +
Preference number: 1 (lower is better)
Translates to: CAQARGGHGRSPVTF*FISSRLDFSLNLGL
Trigger: AAGCCCCAGATTCAGTGAGAAATCCAGTCTGGAGGAGATAAAGCAGAAAGTAACAGGGGACCTCCCATGTCCTCCTCTGGCTTGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 90 bp ATAGTTCAGGATGACTCAGCTTCTACGTCACAAGTACTTGGGATTTaGGGCATGTCTCACCCCACATCTGGTTTATATTCTGTCGTGTGT +
Preference number: 1 (lower is better)
Translates to: IVQDDSASTSQVLGI*GMSHPTSGLYSVVC
Trigger: ACACACGACAGAATATAAACCAGATGTGGGGTGAGACATGCCCCAAATCCCAAGTACTTGTGACGTAGAAGCTGAGTCATCCTGAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 90 bp TTTTATCCATTGAGCCATCCGACTGCTAGTGACTTTACGGTGCTATaGTTTTTGTCTACGCTCTTGAGACACATGTCCCATTGCTTTCAG +
Preference number: 1 (lower is better)
Translates to: FYPLSHPTASDFTVL*FLSTLLRHMSHCFQ
Trigger: CTGAAAGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAAGCATAGCACCGTAAAGTCACTAGCAGTCGGATGGCTCAATGGATAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACAGTAGGGATAGAACAGTaGAGGGGGCAGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: LAGVAGAAHCALLLAEATVGIEQ*RGQGTS
Trigger: GCTGGTGCCCTGCCCCCTGCACTGTTCTATCCCTAC...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACGCCCAGACAGTACTTaGCCCCAATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LAGVAGAAHCALLLAEATRPDST*PQWLAW
Trigger: CCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LGGGDQAHSLGYTQTSRGSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...CCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTTGTGGACCGAGCCTTTaGGGATCCAGACGACGTCCT +
Preference number: 2 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTCGPSL*GSRRRP
Trigger: AGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACA...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGGCCTCCAGCACAGGTaGGCGTGGCTGTGGACAGGC +
Preference number: 2 (lower is better)
Translates to: PSCPLQWDVPCLSLCSRLGLQHR*AWLWTG
Trigger: GCCTGTCCACAGCCACGCCCACCTGTGCTGGAGGCC...CAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCGATGGCTGGCCGGTGTaGCTGGTGCAGCGCACTGTG +
Preference number: 2 (lower is better)
Translates to: PLPQPVLQVGSRYPSGLGDGWPV*LVQRTV
Trigger: CACAGTGCGCTGCACCAGCCACACCGGCCAGCCATC...GCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACA +
Preference number: 2 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTLGLSQ*RLEDDT
Trigger: TGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAG...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACAGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: LAGVAGAAHCALLLAEATDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGGAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 2 (lower is better)
Translates to: TQTSRGLPTQEGTLGLGRSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...CCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CAA 90 bp GGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTaGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGGCCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: GDQAHSLGYTQTSRG*PTQEGTLGLGRPPA
Trigger: TGCTGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 2 (lower is better)
Translates to: PHTHGICPLGDQNPGPCHSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...GTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GCACTGCCATCACCCCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 2 (lower is better)
Translates to: ALPSPPHTRHLSSRRSEPSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...GGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGGGGTGATGGCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTCGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGTGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: PVWLVQRTVRCCWPRPHCDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...ACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 2 (lower is better)
Translates to: GGQSLVLQDRCLRLSPRQSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...CTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCCGCTGAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 2 (lower is better)
Translates to: RRSEPRTLSQPTCLHSPLSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...CAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCGCTGCAGTCACCCCATaGAGTCCAAGGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HSPLTQMSTVSGRQGVPSAAVTP*SPRAPG
Trigger: GCCTGGGGCCCTTGGACTCCATGGGGTGACTGCAGC...GGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCACCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 2 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRAPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp ATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTGCTCTCATGGGCAATGGTaGAAGCCGTGGCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: MAARLQCTLEMAGRCGWCSHGQW*KPWPGR
Trigger: TCGGCCTGGCCACGGCTTTCACCATTGCCCATGAGA...GCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGGCCTGCACACTGGGCTaGGCATTTGGTCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: WPHTAAWWMAARLQCTLEACTLG*AFGPGG
Trigger: GCCCCCTGGACCAAATGCTCAGCCCAGTGTGCAGGC...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTGCCCCTGCCTCAGCCTGTaGTCCAGGTTGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: MAARLQCTLEMAGRCGWCPCLSL*SRLVPG
Trigger: ACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGG...GCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCACCCTGGCCTCACGTGTaGCCGATCTCATGGGCAATG +
Preference number: 2 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRAPWPHV*PISWAM
Trigger: CATTGCCCATGAGATCGGGCACACGTGAGGCCAGGG...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTGCCCTGGCCTCACGTGTaGCCGATCTCATGGGCAATG +
Preference number: 2 (lower is better)
Translates to: DGRKASVHSRDGWPVWLVPWPHV*PISWAM
Trigger: CATTGCCCATGAGATCGGGCACACGTGAGGCCAGGG...CACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 2 (lower is better)
Translates to: PTHTAFVLSEIRTQDPVTSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...TGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGAGAGCAGGCAACTCTaGCTGGGCCAGCACCATGAT +
Preference number: 2 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLESRQL*LGQHHD
Trigger: ATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTC...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAGTACTTGCCCCCAATaGTTGGCCTGGGACTGTCGC +
Preference number: 2 (lower is better)
Translates to: AEATLCGTLTPLTGHPAGSTCPQ*LAWDCR
Trigger: GCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACT...GCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGCCTCACACTGCTGCATaGTGGATGGCCGCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLPHTAA*WMAARL
Trigger: AAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGG...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GGGCTTCCAGGCTCTGTGCCTGGTCCGGCCCCTGCCGTAGATGAAATGTGGTTCCCCTGCCTCAGCCTGTaGTCCAGGTTGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GLPGSVPGPAPAVDEMWFPCLSL*SRLVPG
Trigger: ACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGG...GAACCACATTTCATCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTCCCTGCCTCAGCCTGTaGTCCAGGTTGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GPVPSSLAQTVLAPNGWPPCLSL*SRLVPG
Trigger: ACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGG...AGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GCTGATTTCGGCACTCCACTACTTGGACCTGGCTGCCGCCTGCACACTGGGCTGCACCGCCACATGACCTaGTGCAGTCACCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: ADFGTPLLGPGCRLHTGLHRHMT*CSHPME
Trigger: CTCCATGGGGTGACTGCAGCAGGTCATGTGGCGGTG...CAGCCCAGTGTGCAGGCGGCAGCCAGGTCCAAGTAGTGGAGTGCCGAAATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTGGAGTAGGGAGGCAGTaGATCCCGGGCAATGGGTGC +
Preference number: 2 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVGVGRQ*IPGNGC
Trigger: GCACCCATTGCCCGGGATGCACTGCCTCCCTACTCC...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TGGGAGCCAGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGTCCCCTTCGTCAGTCTaGGGGAGGGCTACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: WEPGGQSLVLQDRCLRLSSPSSV*GRATGR
Trigger: CCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGA...CGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCTGGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGGGCAGAGGTTGGGGTaGATCTTCCCCTTCGTCAGT +
Preference number: 2 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDGQRLG*IFPFVS
Trigger: ACTGACGAAGGGGAAGATCCACCCCAACCTCTGCCC...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCATGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRACHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp GCTGGCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: AGRGHTVWNTHPTHWSPSCHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...GCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCCGGGAGCCACCGTTaGGTACACGAAGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRAGSHR*VHEVLS
Trigger: AGACAGGACTTCGTGTACCCAACGGTGGCTCCCGGC...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp GTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTCCCGTCTACACCCTCTaGCCGAGAGCCAAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: VAGPVPSSLAQTVLAPNGPVYTL*PRAKGD
Trigger: GTCCCCTTTGGCTCTCGGCCAGAGGGTGTAGACGGG...ACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTGTGGACCGAGCCTTTaGGGATCCAGACGACGTCCT +
Preference number: 2 (lower is better)
Translates to: PHALSSGMSPASACAPGWCGPSL*GSRRRP
Trigger: AGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACA...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTTCCAGGCTCTGTGCCTaGTCCGGCCCCTGCCGTAGA +
Preference number: 2 (lower is better)
Translates to: QLGVHSDQSRVAHSGGHISRLCA*SGPCRR
Trigger: TCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGA...AATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAACTGGGCTGAGCATTTaGTCCAGGGGGCATAGTGCC +
Preference number: 2 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRATGLSI*SRGHSA
Trigger: GGCACTATGCCCCCTGGACCAAATGCTCAGCCCAGT...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGACTGGGCTGAGCATTTaGTCCAGGGGGCATAGTGCC +
Preference number: 2 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRTGLSI*SRGHSA
Trigger: GGCACTATGCCCCCTGGACCAAATGCTCAGCCCAGT...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGCACACTGCTGCATGGTaGATGGCCGCAAGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: PHALSSGMSPASACAPGWHTAAW*MAARLQ
Trigger: CTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTG...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp TGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTaGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACAT +
Preference number: 2 (lower is better)
Translates to: CPLQWDVPCLSLCSR*VPGTLAALAGFAAH
Trigger: ATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACACAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RWTVIGVAGPVPSSLAQTQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...TGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GCCTACATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCACACCGCCACATGACCTaGTGCAGTCACCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: AYMLALAADTNVHRVRAAHRHMT*CSHPME
Trigger: CTCCATGGGGTGACTGCAGCAGGTCATGTGGCGGTG...TGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGCACCGCCACATGACCTaGTGCAGTCACCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: WPHTAAWWMAARLQCTLEHRHMT*CSHPME
Trigger: CTCCATGGGGTGACTGCAGCAGGTCATGTGGCGGTG...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGGCTGCAGGAAGGCAGTaGCCAGGGGGCAGAGTAGAT +
Preference number: 2 (lower is better)
Translates to: WPHTAAWWMAARLQCTLEAAGRQ*PGGRVD
Trigger: ATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGC...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAAGATGGTGGCTTGGCTaGAGGAAGGCAGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: QWDVPCLSLCSRLVPGTLRWWLG*RKAVPR
Trigger: CCTGGGCACTGCCTTCCTGCAGCCAAGCCACCATCT...TAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTACGCCCAGACAGTACTTaGCCCCAATGGTTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: QWDVPCLSLCSRLVPGTLRPDST*PQWLAP
Trigger: AGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG...TAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRCHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp TTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCAGCTGCAGTCACCCCATaGAGTCCAAGGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LHSSGPSPGGTTLSHLASAAVTP*SPRAPG
Trigger: GCCTGGGGCCCTTGGACTCCATGGGGTGACTGCAGC...TGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGCAGTCACCCCATaGAGTCCAAGGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: WTEPLGIQTTSSYPVPGKAAVTP*SPRAPG
Trigger: GCCTGGGGCCCTTGGACTCCATGGGGTGACTGCAGC...TTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGCAGGTGGACAGTCATTaGTGTTGCAGGACCGGTGCC +
Preference number: 2 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRQVDSH*CCRTGA
Trigger: GGCACCGGTCCTGCAACACCAATGACTGTCCACCTG...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGAGGCACGCTGCCTCTTaGGCAATTTACTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRRHAAS*AIYCGH
Trigger: GTGGCCACAGTAAATTGCCCAAGAGGCAGCGTGCCT...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAACTCACCCCACTCACTaGTCACCCAGCGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SLCSRLVPGTLAALAGFATHPTH*SPSGQE
Trigger: CTCCTGCCCGCTGGGTGACCAGTGAGTGGGGTGAGT...TGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCCCTCACACTGCTGCATaGTGGATGGCCGCAAGGCTT +
Preference number: 2 (lower is better)
Translates to: VGCPLPQPVLQVGSRYPSPHTAA*WMAARL
Trigger: AAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGG...GCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp GTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGTAAGGCTTCTTGGTaGGGAGTGTGTGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: VAGPVPSSLAQTVLAPNGCKASW*GVCGPQ
Trigger: CTGGGGCCCACACACTCCTCACCAAGAAGCCTTACA...ACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp GGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTGTAAGGCTTCTTGGTaGGGAGTGTGTGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GGQSLVLQDRCLRLSPRQCKASW*GVCGPQ
Trigger: CTGGGGCCCACACACTCCTCACCAAGAAGCCTTACA...CTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACA +
Preference number: 2 (lower is better)
Translates to: QRTTRWRRPGPQLGVHSDLGLSQ*RLEDDT
Trigger: TGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAG...GTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGGTGTGGGGCCACTGCTaGGCTGTCCAGCTGATTTCG +
Preference number: 2 (lower is better)
Translates to: LTLLHGGWPQGFSALSRWVWGHC*AVQLIS
Trigger: CGAAATCAGCTGGACAGCTCAGCAGTGGCCCCACAC...CCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp GTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCCTCACTGACGCGATTTaGCTCCATGCTGGAATCGGC +
Preference number: 2 (lower is better)
Translates to: VGCPLPQPVLQVGSRYPSLTDAI*LHAGIG
Trigger: GCCGATTCCAGCATGGAGTCAAATCGCGTCAGTGAG...GCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
3UTR-3UTR GCA 90 bp ATCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: IFPFVSLGEGYREVVSSLQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...TAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGATCCCGGGCAATGGGTaGATTGAAGCGGTAGTGGAG +
Preference number: 2 (lower is better)
Translates to: QAHSLGYTQTSRGLPTQEIPGNG*IEAVVE
Trigger: CTCCACTACCGCTTCAATGCACCCATTGCCCGGGAT...CTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGAGACCAGTCGAGGGTTaGCCACTCAGGAGGGCACAT +
Preference number: 2 (lower is better)
Translates to: WPHTAAWWMAARLQCTLERPVEG*PLRRAH
Trigger: ATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCT...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGGCTGCAGGAAGGCAGTaGCCAGGGGGCAGAGTAGAT +
Preference number: 2 (lower is better)
Translates to: LTLLHGGWPQGFSALSRWAAGRQ*PGGRVD
Trigger: ATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGC...CCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGCTATCCTGTGTCCCCTaGCCTCACGTGTGCCCGATC +
Preference number: 2 (lower is better)
Translates to: FFWAISRRHHTVTLGLTLLSCVP*PHVCPI
Trigger: GATCGGGCACACGTGAGGCCAGGGGACACAGGATAG...CAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CACCCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACGCTGCAGTCACCCCATaGAGTCCAAGGGCCCCAGGC +
Preference number: 2 (lower is better)
Translates to: HPLLGMSSTCRIFRGKGHAAVTP*SPRAPG
Trigger: GCCTGGGGCCCTTGGACTCCATGGGGTGACTGCAGC...GTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGGGCCTGTCCTGGGAGCCAGGTaGACAGTCATTGGTGTTGCA +
Preference number: 2 (lower is better)
Translates to: GVHSDQSRVAHSGGHIGPVLGAR*TVIGVA
Trigger: TGCAACACCAATGACTGTCCACCTGGCTCCCAGGAC...AGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTCCAGGCTCTGTGCCTaGTCCGGCCCCTGCCGTAGA +
Preference number: 2 (lower is better)
Translates to: TQSGGHGSVLQARCLLGNSRLCA*SGPCRR
Trigger: TCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGA...ATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp TTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTaGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LHSSGPSPGGTTLSH*ASHCCMVDGRKASV
Trigger: CACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGTGTAAGGCTTCTTGGTaGGGAGTGTGTGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWCKASW*GVCGPQ
Trigger: CTGGGGCCCACACACTCCTCACCAAGAAGCCTTACA...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTTCCCACGCCATCGTaGTTCATGCCAAATCTGAGG +
Preference number: 2 (lower is better)
Translates to: PHALSSGMSPASACAPGWFPTPS*FMPNLR
Trigger: CCTCAGATTTGGCATGAATCACGATGGCGTGGGAAA...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: LTLLHGGWPQGFSALSRWGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...CCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp AGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAGGACGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: RPHCVEHSPHSLVTQRAGRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...TCCTGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp TTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACGCCCAGACAGTACTTaGCCCCAATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LHSSGPSPGGTTLSHLASRPDST*PQWLAW
Trigger: CCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG...TGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGCTGGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: FWAISRRHHTVTLGLTLLDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...CAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCAGATGGTGGCTTGGCTaGAGGAAGGCAGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ILAFFWAISRRHHTVTLGRWWLG*RKAVPR
Trigger: CCTGGGCACTGCCTTCCTGCAGCCAAGCCACCATCT...GCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GCACTGCCATCACCCCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: ALPSPPHTRHLSSRRSEPTAEGP*VASSSP
Trigger: TGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGT...GGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGGGGTGATGGCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: PLGDQNPGPCHSLHACTRTAEGP*VASSSP
Trigger: TGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGT...GCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWTAEGP*VASSSP
Trigger: TGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGT...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTGCGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 2 (lower is better)
Translates to: MAARLQCTLEMAGRCGWCVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...GCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGTGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRCSLSS*DAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACA...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CACCCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACCCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 2 (lower is better)
Translates to: HPLLGMSSTCRIFRGKGHPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...GTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTGTCCTGGGAGCCAGGTaGACAGTCATTGGTGTTGCA +
Preference number: 2 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVVLGAR*TVIGVA
Trigger: TGCAACACCAATGACTGTCCACCTGGCTCCCAGGAC...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGTGTGGACCGAGCCTTTaGGGATCCAGACGACGTCCT +
Preference number: 2 (lower is better)
Translates to: LTLLHGGWPQGFSALSRWCGPSL*GSRRRP
Trigger: AGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACA...CCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGTCCAGGCTCTGTGCCTaGTCCGGCCCCTGCCGTAGA +
Preference number: 2 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSRLCA*SGPCRR
Trigger: TCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGA...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp ACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCTCTCATGGGCAATGGTaGAAGCCGTGGCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: TVGYTKSCLGGRLFKQSPSHGQW*KPWPGR
Trigger: TCGGCCTGGCCACGGCTTTCACCATTGCCCATGAGA...GGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp GGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 2 (lower is better)
Translates to: GPVPSSLAQTVLAPNGWPSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...AGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGGCAGTGCCCAGTGTGGGGCCACTGCTaGGCTGTCCAGCTGATTTCG +
Preference number: 2 (lower is better)
Translates to: RKLHRIVDGGLAAGRQCPVWGHC*AVQLIS
Trigger: CGAAATCAGCTGGACAGCTCAGCAGTGGCCCCACAC...TGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTCAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCCAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LDENVDRAFGDPDDVLIPQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...GGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCGTAGGGATAGAACAGTaGAGGGGGCAGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: TVGYTKSCLGGRLFKQSPVGIEQ*RGQGTS
Trigger: GCTGGTGCCCTGCCCCCTGCACTGTTCTATCCCTAC...GGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp TCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: SSRRSEPRTLSQPTCLHSGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...CGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: ALLQRTTRWRRPGPQLGVRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...TACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp TTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCACGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: LHSPLTQMSTVSGRQGVPRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...TGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp ATCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTAACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: IFPFVSLGEGYREVVSSLTAEGP*VASSSP
Trigger: TGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGT...TAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCATCCCCTTCGTCAGTCTaGGGGAGGGCTACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSSPSSV*GRATGR
Trigger: CCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGA...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCTCCCCTTCGTCAGTCTaGGGGAGGGCTACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RQLCLGQHHDDERCINGSSPSSV*GRATGR
Trigger: CCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGA...GGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGGTGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: TQTSRGLPTQEGTLGLGRCSLSS*DAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACA...CCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCCGTCTACACCCTCTaGCCGAGAGCCAAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PVPGKAGLKTPSMVSQALPVYTL*PRAKGD
Trigger: GTCCCCTTTGGCTCTCGGCCAGAGGGTGTAGACGGG...CAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GCAGCACATCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTGAGCACCAGCCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 2 (lower is better)
Translates to: AAHLAEVGSATELKFEHQPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...CTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGATGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCCCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 2 (lower is better)
Translates to: ICPLGDQNPGPCHSLHACPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...GCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGAGTACTTGCCCCCAATaGTTGGCCTGGGACTGTCGC +
Preference number: 2 (lower is better)
Translates to: SSRRSEPRTLSQPTCLHSSTCPQ*LAWDCR
Trigger: GCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACT...CGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGTCCTGGGAGCCAGGTaGACAGTCATTGGTGTTGCA +
Preference number: 2 (lower is better)
Translates to: QLGVHSDQSRVAHSGGHIVLGAR*TVIGVA
Trigger: TGCAACACCAATGACTGTCCACCTGGCTCCCAGGAC...AATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGACAGGTTCAGATCTTaGATGAAAATGTGGACCGAG +
Preference number: 2 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLDRFRS*MKMWTE
Trigger: CTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GCAGCACATCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTGAGCACCAGCAAAGGACCACTCGGTaGCGGAGACCAGGCCCACAG +
Preference number: 2 (lower is better)
Translates to: AAHLAEVGSATELKFEHQQRTTR*RRPGPQ
Trigger: CTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG...CTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGATGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp ACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTaGGCCCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: TGAFVSRPDSTCPQW*APLSIVCVWHSVPS
Trigger: TGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR TCA 90 bp TCACATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGTAAGGCTTCTTGGTaGGGAGTGTGTGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: SHPCILLGHLQAAPHCHTCKASW*GVCGPQ
Trigger: CTGGGGCCCACACACTCCTCACCAAGAAGCCTTACA...AGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp TTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGCTGTTTCCCACGCCATCGTaGTTCATGCCAAATCTGAGG +
Preference number: 2 (lower is better)
Translates to: FWAISRRHHTVTLGLTLLFPTPS*FMPNLR
Trigger: CCTCAGATTTGGCATGAATCACGATGGCGTGGGAAA...CAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp GTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCTACAGAACTGAAATTTaGGCACCAGGGGGCAGTAAG +
Preference number: 2 (lower is better)
Translates to: VGCPLPQPVLQVGSRYPSYRTEI*APGGSK
Trigger: CTTACTGCCCCCTGGTGCTCAAATTTCAGTTCTGTA...GCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGCAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: AEATLCGTLTPLTGHPAGGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...GCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCAGTAGGGATAGAACAGTaGAGGGGGCAGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSVGIEQ*RGQGTS
Trigger: GCTGGTGCCCTGCCCCCTGCACTGTTCTATCCCTAC...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCTGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: PQGRACSTMMGNGLDVELCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTATGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: ALLQRTTRWRRPGPQLGVCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...TACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTCGCCCAGACAGTACTTaGCCCCAATGGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCRPDST*PQWLAW
Trigger: CCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCGGGCAATGGGTGCATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCATGATGATGAGAGATaGATTAATGGGTCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: PGNGCIEAVVESRQLCLGHDDER*INGSQG
Trigger: GCCCTGGGACCCATTAATGCATCTCTCATCATCATG...GCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCCATTGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 2 (lower is better)
Translates to: MLALAADTNVHRVRAAGCVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...ACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGGCCGGGAGCCACCGTTaGGTACACGAAGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SRQLCLGQHHDDERCINGAGSHR*VHEVLS
Trigger: AGACAGGACTTCGTGTACCCAACGGTGGCTCCCGGC...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp GCCTACATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCATGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: AYMLALAADTNVHRVRAACSLSS*DAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACA...TGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGCCCGTCTACACCCTCTaGCCGAGAGCCAAAGGGGAC +
Preference number: 2 (lower is better)
Translates to: RDRFRSWMKMWTEPLGIQPVYTL*PRAKGD
Trigger: GTCCCCTTTGGCTCTCGGCCAGAGGGTGTAGACGGG...CTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGCCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 2 (lower is better)
Translates to: QRDQFPTTQSGGHGSVLQPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...CTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CACCCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACAGTACTTGCCCCCAATaGTTGGCCTGGGACTGTCGC +
Preference number: 2 (lower is better)
Translates to: HPLLGMSSTCRIFRGKGHSTCPQ*LAWDCR
Trigger: GCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACT...GTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTGCGACAGGTTCAGATCTTaGATGAAAATGTGGACCGAG +
Preference number: 2 (lower is better)
Translates to: MAARLQCTLEMAGRCGWCDRFRS*MKMWTE
Trigger: CTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC...GCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAACATCGCATAGTAGATaGTGGCTTGGCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: QWDVPCLSLCSRLVPGTLTSHSR*WLGCRK
Trigger: CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGT...TAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CGCACACCAGCGTCACAGCTACGGCTGCAGCGTGACCAGTTTCCTACAACCCAAGGCCGATATCTTCATTaGTACTGCAGCTCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: RTPASQLRLQRDQFPTTQGRYLH*YCSSSH
Trigger: GTGAGAGGAGCTGCAGTATCAATGAAGATATCGGCC...TTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCTTTCCCACGCCATCGTaGTTCATGCCAAATCTGAGG +
Preference number: 2 (lower is better)
Translates to: PLGDQNPGPCHSLHACTRFPTPS*FMPNLR
Trigger: CCTCAGATTTGGCATGAATCACGATGGCGTGGGAAA...GCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp AGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 2 (lower is better)
Translates to: RWTVIGVAGPVPSSLAQTSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...TGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCCGCTGACACAAATGTCCAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 2 (lower is better)
Translates to: PRTLSQPTCLHSPLTQMSSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...GGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp ATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACA +
Preference number: 2 (lower is better)
Translates to: IEAVVESRQLCLGQHHDDLGLSQ*RLEDDT
Trigger: TGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAG...ATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp ACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACA +
Preference number: 2 (lower is better)
Translates to: TQSGGHGSVLQARCLLGNLGLSQ*RLEDDT
Trigger: TGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAG...ATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGGGCTTCCAGGCTCTGGCTTGCACTCGCCGCTaGCACAAATGTCCACCGTGT +
Preference number: 2 (lower is better)
Translates to: QHHDDERCINGSQGFQALACTRR*HKCPPC
Trigger: ACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGC...CAGAGCCTGGAAGCCCTGGGACCCATTAATGCATCTCTCATCATCATGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp TTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGTCCCCGTATTTACACTaGCGCGATTTGACTCCATGC +
Preference number: 2 (lower is better)
Translates to: FFWAISRRHHTVTLGLTLSPYLH*RDLTPC
Trigger: GCATGGAGTCAAATCGCGTCAGTGTAAATACGGGGA...CAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR-3UTR GCA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGCCCTGCCTCAGCCTGTaGTCCAGGTTGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTPCLSL*SRLVPG
Trigger: ACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGG...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: IVCVWHSVPSAAGMLLVMQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...CATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGGGCTTCCAGGCTCTGGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: QHHDDERCINGSQGFQALGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...CAGAGCCTGGAAGCCCTGGGACCCATTAATGCATCTCTCATCATCATGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCCCTGGCCTCACGTGTaGCCGATCTCATGGGCAATG +
Preference number: 2 (lower is better)
Translates to: DVLIPSSWQSWAKDTFNGPWPHV*PISWAM
Trigger: CATTGCCCATGAGATCGGGCACACGTGAGGCCAGGG...ACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGCACCGCCACATGACCTaGTGCAGTCACCCCATGGAG +
Preference number: 2 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTHRHMT*CSHPME
Trigger: CTCCATGGGGTGACTGCAGCAGGTCATGTGGCGGTG...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCCGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: GNSAWASTMMMRDALMGPDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...GGGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCAACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSTAEGP*VASSSP
Trigger: TGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGT...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GCAGCACATCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTGAGCACCAGGGGCAGAGGTTGGGGTaGATCTTCCCCTTCGTCAGT +
Preference number: 2 (lower is better)
Translates to: AAHLAEVGSATELKFEHQGQRLG*IFPFVS
Trigger: ACTGACGAAGGGGAAGATCCACCCCAACCTCTGCCC...CTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGATGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 2 (lower is better)
Translates to: PIWWTWFCVAGTLPLGQFCHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...AAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGGCCGGGAGCCACCGTTaGGTACACGAAGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTAGSHR*VHEVLS
Trigger: AGACAGGACTTCGTGTACCCAACGGTGGCTCCCGGC...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGGGCTTCCAGGCTCTGAGTACTTGCCCCCAATaGTTGGCCTGGGACTGTCGC +
Preference number: 2 (lower is better)
Translates to: QHHDDERCINGSQGFQALSTCPQ*LAWDCR
Trigger: GCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACT...CAGAGCCTGGAAGCCCTGGGACCCATTAATGCATCTCTCATCATCATGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGGGCTTCCAGGCTCTGTGTGGACCGAGCCTTTaGGGATCCAGACGACGTCCT +
Preference number: 2 (lower is better)
Translates to: QHHDDERCINGSQGFQALCGPSL*GSRRRP
Trigger: AGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACA...CAGAGCCTGGAAGCCCTGGGACCCATTAATGCATCTCTCATCATCATGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp GTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCGCGATTTGACTCC +
Preference number: 2 (lower is better)
Translates to: VPSAAGMLLVMHRLL*LRHHSSLQTSRFDS
Trigger: GGAGTCAAATCGCGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR CAA 90 bp CACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATaGCTCTTGCTCAGACACCACAGTTCACTGCAGACCTCCCCGTAT +
Preference number: 2 (lower is better)
Translates to: HSVPSAAGMLLVMHR*LLLRHHSSLQTSPY
Trigger: ATACGGGGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR CAA 90 bp CACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATaGCTCTTGCTCAGACACCACAGTTCACTGCAGACCTCACTGACG +
Preference number: 2 (lower is better)
Translates to: HSVPSAAGMLLVMHR*LLLRHHSSLQTSLT
Trigger: CGTCAGTGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
3UTR CAA 90 bp ATGGGGGCCACTCTCTTCTGGGCCACGGTGACCTTTGGGTCCACCTaGCAGGGGTTCAATCAGATACTCTTCATCATCTGCCACAATCAG +
Preference number: 2 (lower is better)
Translates to: MGATLFWATVTFGST*QGFNQILFIICHNQ
Trigger: CTGATTGTGGCAGATGATGAAGAGTATCTGATTGAACCCCTGCAAGGTGGACCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR TCA 90 bp TCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCATCTCATGGGCAATGGTaGAAGCCGTGGCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: SSYPVPGKAGLKTPSMVSSHGQW*KPWPGR
Trigger: TCGGCCTGGCCACGGCTTTCACCATTGCCCATGAGA...TGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CAGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACGATTCATGCCAAATCTaGGGAGAAGAGTATCAGCTC +
Preference number: 2 (lower is better)
Translates to: QVDSHWCCRTGAFVSRPDDSCQI*GEEYQL
Trigger: GAGCTGATACTCTTCTCCTCAGATTTGGCATGAATC...GTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATCTGGCGGCAGAGTAGATCGTTaGTCTGCACTCTTACAAAGG +
Preference number: 2 (lower is better)
Translates to: QVGSRYPSGLGRFCSTSGGRVDR*SALLQR
Trigger: CCTTTGTAAGAGTGCAGATCAACGATCTACTCTGCC...GCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: PLGDQNPGPCHSLHACTRSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...GCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp TCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACGCCACATGACCTGCTaGAGTCACCCCATGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SSYPVPGKAGLKTPSMVSRHMTC*SHPMES
Trigger: GGACTCCATGGGGTGACTGCAGCAGGTCATGTGGCG...TGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 2 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 2 (lower is better)
Translates to: HTRHLSSRRSEPRTLSQPVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...AGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACCAGGTGGACAGTCATTaGTGTTGCAGGACCGGTGCC +
Preference number: 2 (lower is better)
Translates to: QVQILDENVDRAFGDPDDQVDSH*CCRTGA
Trigger: GGCACCGGTCCTGCAACACCAATGACTGTCCACCTG...GTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCCAGGTGGACAGTCATTaGTGTTGCAGGACCGGTGCC +
Preference number: 2 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLQVDSH*CCRTGA
Trigger: GGCACCGGTCCTGCAACACCAATGACTGTCCACCTG...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATCTGGCTCTTGGATGAAAATGTaGACCGAGCCTTTGGGGATC +
Preference number: 2 (lower is better)
Translates to: QVGSRYPSGLGRFCSTSGSWMKM*TEPLGI
Trigger: GATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGA...GCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp CACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATaGCTCTTGCTCAGACACCACAGTTCACTGCAGACCTCGCGATTT +
Preference number: 2 (lower is better)
Translates to: HSVPSAAGMLLVMHR*LLLRHHSSLQTSRF
Trigger: AAATCGCGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR CAA 90 bp CTCAGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTaGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LRDRFRSWMKMWTEP*GIQTTSSYPVPGKA
Trigger: AGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp GTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCCCCGTATTTACAC +
Preference number: 2 (lower is better)
Translates to: VPSAAGMLLVMHRLL*LRHHSSLQTSPYLH
Trigger: GTGTAAATACGGGGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR CAA 90 bp GTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCACTGACGCGATTT +
Preference number: 2 (lower is better)
Translates to: VPSAAGMLLVMHRLL*LRHHSSLQTSLTRF
Trigger: AAATCGCGTCAGTGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
3UTR-3UTR TCA 90 bp TCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTACTGTACACTGACGCGATTTaGCTCCATGCTGGAATCGGC +
Preference number: 2 (lower is better)
Translates to: SGGHGSVLQARCLLGNLLYTDAI*LHAGIG
Trigger: GCCGATTCCAGCATGGAGTCAAATCGCGTCAGTGTA...CAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR-3UTR TCA 90 bp CCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTTACACTGACGCGATTTaGCTCCATGCTGGAATCGGC +
Preference number: 2 (lower is better)
Translates to: PIWWTWFCVAGTLPLGQFYTDAI*LHAGIG
Trigger: GCCGATTCCAGCATGGAGTCAAATCGCGTCAGTGTA...AAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR-3UTR TCA 90 bp ATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCACTGCAGACCTCACTaGCGCGATTTGACTCCATGC +
Preference number: 2 (lower is better)
Translates to: MKMWTEPLGIQTTSSYPVHCRPH*RDLTPC
Trigger: GCATGGAGTCAAATCGCGTCAGTGAGGTCTGCAGTG...AACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
3UTR-3UTR GCA 90 bp TCTGCTAGGCAAGTCAGCGAACAGGCCTTCACACCCCCTCCTCGGTATGTCTTCAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SARQVSEQAFTPPPRYVFSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...GAAGACATACCGAGGAGGGGGTGTGAAGGCCTGTTCGCTGACTTGCCTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp TGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCACCCCCACACACTGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: WAKDTFNGLTGTAITPTHCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...GTGTGTGGGGGTGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 2 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CGGGCAGGAGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTTCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RAGGQRRKLHRIVDGGLASNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...AGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCTCCTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCAGGGCAGAGGTTGGGGTaGATCTTCCCCTTCGTCAGT +
Preference number: 2 (lower is better)
Translates to: SSYPVPGKAGLKTPSMVSGQRLG*IFPFVS
Trigger: ACTGACGAAGGGGAAGATCCACCCCAACCTCTGCCC...TGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 2 (lower is better)
Translates to: WTEPLGIQTTSSYPVPGKSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...TTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CCTCTGGCCGAGAGCCAAAGGGGACACAGACTCGTTTGTAGCACCACCCTTTGTTCGATAGTGTGTGTTTaGCACAGTGTTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: PLAESQRGHRLVCSTTLCSIVCV*HSVPSA
Trigger: TGCTGAGGGAACACTGTGCCAAACACACACTATCGA...ACAAAGGGTGGTGCTACAAACGAGTCTGTGTCCCCTTTGGCTCTCGGCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 90 bp TGGCTGCCTATCTCCGCCTCAAAGAAGCAATGTCATATAACCTCCTaGTCCATCCCCAAAGGCACAGGAGTACCTCTCACTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: WLPISASKKQCHITS*SIPKGTGVPLTPQA
Trigger: AGCCTGTGGAGTGAGAGGTACTCCTGTGCCTTTGGGGATGGACAAGGAGGTTATATGACATTGCTTCTTTGAGGCGGAGATAGGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR TCA 90 bp TGTGTCCAGATGGGGGTGACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCTTTTGTCTACGCTCTTaGGACACATGTCCCATTGCT +
Preference number: 2 (lower is better)
Translates to: CVQMGVTQRGTLVYYMGAFCLRS*DTCPIA
Trigger: AGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAA...GGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACACCCTGCCTCAGCCTGTaGTCCAGGTTGGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: IFRSKGGRGARDLNMCATPCLSL*SRLVPG
Trigger: ACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGG...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RWTVIGVAGPVPSSLAQTGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...TGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: DPDDVLIPSSWQSWAKDTSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...GGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTTGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCATCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SLCSRLVPGTLAALAGFASNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...TGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CGCACACCAGCGTCACAGCTACGGCTGCAGCGTGACCAGTTTCCTACAACCCAATCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RTPASQLRLQRDQFPTTQSNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...TTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGTCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWSNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 2 (lower is better)
Translates to: VGYTKSCLGGRLFKQSPRSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...CCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp TTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCTGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: LDENVDRAFGDPDDVLIPCSLSS*DAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACA...GGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGAGTACTTGCCCCCAATaGTTGGCCCCTTTGTCGATA +
Preference number: 2 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSTCPQ*LAPLSI
Trigger: TATCGACAAAGGGGCCAACCATTGGGGGCAAGTACT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR CAA 90 bp GACACAGACTCGTTTGTAGCACCACCCTTTGTCGATAGTGTGTGTTaGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCA +
Preference number: 2 (lower is better)
Translates to: DTDSFVAPPFVDSVC*AQCSLSSWDAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTGCTACAAACGAGTCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR TCA 90 bp CAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 2 (lower is better)
Translates to: QRDQFPTTQSGGHGSVLQSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...CTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTCAGTGGGATGTCCCCTaGCTCAGCCTGTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTQWDVP*LSLCSR
Trigger: CCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp TGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTAGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: WTVIGVAGPVPSSLAQTVGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...TACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp AATCAGATACTCTTCATCATCTGCCACAATCAGGCCATGCTGGATGGGGGACAGAAGCCTGAGCACTTGTaGACAAGCCAGAGGAGGACA +
Preference number: 2 (lower is better)
Translates to: NQILFIICHNQAMLDGGQKPEHL*TSQRRT
Trigger: TGTCCTCCTCTGGCTTGTGCACAAGTGCTCAGGCTT...CTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CCA 90 bp AGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTTGCTCAGACACCACAGAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 2 (lower is better)
Translates to: SSWDAIGDAPIALAQTPQSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...CTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp ATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCGATTTGACTCCATGCTaGAATCGGCACTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: ICPLGDQNPGPCHSLHACDLTPC*NRHCSS
Trigger: TGATGAGCAGTGCCGATTCCAGCATGGAGTCAAATC...GCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp TCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTACTGGATTTGACTCCATGCTaGAATCGGCACTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: SGGHGSVLQARCLLGNLLDLTPC*NRHCSS
Trigger: TGATGAGCAGTGCCGATTCCAGCATGGAGTCAAATC...CAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp AGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCTCGATAGTGTGTGTTTaGCACAGTGTTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: RQLCLGQHHDDERCINGSSIVCV*HSVPSA
Trigger: TGCTGAGGGAACACTGTGCCAAACACACACTATCGA...GGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp ATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGACAGGTTCAGATCTTaGATGAAAATGTGGACCGAG +
Preference number: 2 (lower is better)
Translates to: IEAVVESRQLCLGQHHDDDRFRS*MKMWTE
Trigger: CTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC...ATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp AATCAGATACTCTTCATCATCTGCCACAATCAGGCCATGCTGGATGGGGGACAGAGCCAGAGGAGGACATaGGAGGTCCCCTGTTACTTT +
Preference number: 2 (lower is better)
Translates to: NQILFIICHNQAMLDGGQSQRRT*EVPCYF
Trigger: AAAGTAACAGGGGACCTCCCATGTCCTCCTCTGGCT...CTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CCA 90 bp CACCATCCTCTTAGAATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 2 (lower is better)
Translates to: HHPLRICILYDPCLQVNEGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...TTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGATTCTAAGAGGATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR TCA 90 bp CCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTGATTCATGCCAAATCTaGGGAGAAGAGTATCAGCTC +
Preference number: 2 (lower is better)
Translates to: PIWWTWFCVAGTLPLGQFDSCQI*GEEYQL
Trigger: GAGCTGATACTCTTCTCCTCAGATTTGGCATGAATC...AAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGGATTCATGCCAAATCTaGGGAGAAGAGTATCAGCTC +
Preference number: 2 (lower is better)
Translates to: SRQLCLGQHHDDERCINGDSCQI*GEEYQL
Trigger: GAGCTGATACTCTTCTCCTCAGATTTGGCATGAATC...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR TCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTTCCCCGTATTTACACTaGCGCGATTTGACTCCATGC +
Preference number: 2 (lower is better)
Translates to: RSKGGRGARDLNMCATRSSPYLH*RDLTPC
Trigger: GCATGGAGTCAAATCGCGTCAGTGTAAATACGGGGA...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR GCA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCGTAGGGATAGAACAGTaGAGGGGGCAGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: YTRQNFINVRLLGEECVGVGIEQ*RGQGTS
Trigger: GCTGGTGCCCTGCCCCCTGCACTGTTCTATCCCTAC...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 2 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR GCA 90 bp CGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGGCAGTGCCCATCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RKLHRIVDGGLAAGRQCPSNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...TGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCGATTTGACTCCATGCTaGAATCGGCACTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLDLTPC*NRHCSS
Trigger: TGATGAGCAGTGCCGATTCCAGCATGGAGTCAAATC...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CCA 90 bp CAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGTCGATAGTGTGTGTTTaGCACAGTGTTCCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: QRDQFPTTQSGGHGSVLQSIVCV*HSVPSA
Trigger: TGCTGAGGGAACACTGTGCCAAACACACACTATCGA...CTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp TCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTACTGAGTTCCTGGCAAAGCTaGGCTAAAGACACCTTCAAT +
Preference number: 2 (lower is better)
Translates to: SGGHGSVLQARCLLGNLLSSWQS*AKDTFN
Trigger: ATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACT...CAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCCCTCCTCGGTATGTCTTCCACGTGTAGAATTTTCCGCGGAAAGGGACACTGTGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: PLLGMSSTCRIFRGKGHCGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...ACAGTGTCCCTTTCCGCGGAAAATTCTACACGTGGAAGACATACCGAGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp ATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: ICPLGDQNPGPCHSLHACGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...GCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCATCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSSNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR GCA 90 bp GCTCGGTTCAGGCTCTGGTATCCTGGACGCTCTCTCTCTGATTCTGTTTCTTCTTCCCCTGTTACTTTCTaGTTTATCTCCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: ARFRLWYPGRSLSDSVSSSPVTF*FISSRL
Trigger: CAGTCTGGAGGAGATAAAGCAGAAAGTAACAGGGGA...AGAAGAAACAGAATCAGAGAGAGAGCGTCCAGGATACCAGAGCCTGAACCGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CAA 90 bp CCATTGAGCCATCCGACTGCTAGTGACTTTACGGTGCTATGCTTTTaGTCTACGCTCTTGAGACACATGTCCCATTGCTTTCAGCCTTAC +
Preference number: 2 (lower is better)
Translates to: PLSHPTASDFTVLCF*STLLRHMSHCFQPY
Trigger: GTAAGGCTGAAAGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAAGCATAGCACCGTAAAGTCACTAGCAGTCGGATGGCTCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: RGARDLNMCATRSPLSSLCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CCTATCTCCGCCTCAAAGAAGCAATGTCATATAACCTCCTTGTCCATCCCCAAAGTGTGTGGATGTGTGTaGGTAGAGCTCAGAGGACAA +
Preference number: 2 (lower is better)
Translates to: PISASKKQCHITSLSIPKVCGCV*VELRGQ
Trigger: TTGTCCTCTGAGCTCTACCCACACACATCCACACAC...TTTGGGGATGGACAAGGAGGTTATATGACATTGCTTCTTTGAGGCGGAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR TCA 90 bp CACCATCCTCTTAGAATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAATCCTCTCTCCTCCTGTaGCCCAGCCCTTCAGTTATA +
Preference number: 2 (lower is better)
Translates to: HHPLRICILYDPCLQVNESSLLL*PSPSVI
Trigger: TATAACTGAAGGGCTGGGTCACAGGAGGAGAGAGGA...TTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGATTCTAAGAGGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp CTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGACTTAAATATGTGTaGAACAAGGAGTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LIPSSWQSWAKDTFNGLTGLKYV*NKESSL
Trigger: GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCC...TGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CCA 90 bp CACCATCCTCTTAGAATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAACTCTCCTCCATAACCTaGGTCCTGGGGATCAAAGTC +
Preference number: 2 (lower is better)
Translates to: HHPLRICILYDPCLQVNELSSIT*VLGIKV
Trigger: GACTTTGATCCCCAGGACCCAGGTTATGGAGGAGAG...TTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGATTCTAAGAGGATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CCA 90 bp CCTATCTCCGCCTCAAAGAAGCAATGTCATATAACCTCCTTGTCCATCCCCAAATGTGTGTATGTGAGGTaGACAAGCCTGAGCACTTGT +
Preference number: 2 (lower is better)
Translates to: PISASKKQCHITSLSIPKCVYVR*TSLSTC
Trigger: ACAAGTGCTCAGGCTTGTCCACCTCACATACACACA...TTTGGGGATGGACAAGGAGGTTATATGACATTGCTTCTTTGAGGCGGAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR TCA 90 bp CCTATCTCCGCCTCAAAGAAGCAATGTCATATAACCTCCTTGTCCATCCCCAAACAAACACTCTACCACTaGGCTCCTCTTTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: PISASKKQCHITSLSIPKQTLYH*APLLFA
Trigger: AGCAAACAAAAGAGGAGCTCAGTGGTAGAGTGTTTG...TTTGGGGATGGACAAGGAGGTTATATGACATTGCTTCTTTGAGGCGGAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CCA 90 bp TTACCCGCCCTTCTACCCAAGGACATCTACCGAATATGGCCTAACAAGATACATCTCTTGTTGGCATTTTaGCGGCTTAACTACCCAAGT +
Preference number: 2 (lower is better)
Translates to: LPALLPKDIYRIWPNKIHLLLAF*RLNYPS
Trigger: ACTTGGGTAGTTAAGCCGCCAAAATGCCAACAAGAG...ATGTATCTTGTTAGGCCATATTCGGTAGATGTCCTTGGGTAGAAGGGCGGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CAA 90 bp CCGACTGCTAGTGACTTTACGGTGCTATGCTTTTTGTCTACGCTCTaGAGACACATGTCCCATTGCTTTCAGCCTTACATAAGTCTATAC +
Preference number: 2 (lower is better)
Translates to: PTASDFTVLCFLSTL*RHMSHCFQPYISLY
Trigger: GTATAGACTTATGTAAGGCTGAAAGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAAGCATAGCACCGTAAAGTCACTAGCAGTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp CACCATCCTCTTAGAATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAAAGGCTTGATAGCAAGTaGTTTTATCCATTGAGCCAT +
Preference number: 2 (lower is better)
Translates to: HHPLRICILYDPCLQVNERLDSK*FYPLSH
Trigger: ATGGCTCAATGGATAAAAGCACTTGCTATCAAGCCT...TTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGATTCTAAGAGGATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR GCA 90 bp ATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATCACTGTAGACACATGTCCCATTaGTTTCAGCCTTACATAAGT +
Preference number: 2 (lower is better)
Translates to: ILYDPCLQVNEALEFNHCRHMSH*FQPYIS
Trigger: ACTTATGTAAGGCTGAAAGCAATGGGACATGTGTCT...ACAGTGATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CAA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACAAGGGCACATTGGGCCTaGGCAGGCCTCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: LAGVAGAAHCALLLAEATRAHWA*AGLQHR
Trigger: CCTGTGCTGGAGGCCTGCCAAGGCCCAATGTGCCCT...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTAGGGCACATTGGGCCTaGGCAGGCCTCCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTRAHWA*AGLQHR
Trigger: CCTGTGCTGGAGGCCTGCCAAGGCCCAATGTGCCCT...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTCAGACCAGTCGAGGGTaGCCCACTCAGGAGGGCACA +
Preference number: 3 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTQTSRG*PTQEGT
Trigger: TGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTG...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTGGTaGAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: QCTLEMAGRCGW*SALCAAAGRGH
Trigger: GTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGTCAGGCAGGGCAGAGGTaGGGGTGGATCTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: PVWLVQRTVRCCWPRPHCQAGQR*GWIFPF
Trigger: GAAGGGGAAGATCCACCCCAACCTCTGCCCTGCCTG...ACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp CTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTGGCTaGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGC +
Preference number: 3 (lower is better)
Translates to: LQCTLEMAGRCG*CSALCAAAGRG
Trigger: GCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp AAGGCTTCAGTGCACTCTCGAGATGGCTGGCCGGTGTaGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCG +
Preference number: 3 (lower is better)
Translates to: KASVHSRDGWPV*LVQRTVRCCWP
Trigger: CGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp GATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGCTaGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGC +
Preference number: 3 (lower is better)
Translates to: DGRKASVHSRDG*PVWLVQRTVRC
Trigger: GCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGCCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGACTCAGGAGGGCACATaGGGCCTTGGCAGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLTQEGT*GLGRPP
Trigger: TGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAGT...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCCAGACCAGTCGAGGGTaGCCCACTCAGGAGGGCACA +
Preference number: 3 (lower is better)
Translates to: PLPQPVLQVGSRYPSGLGQTSRG*PTQEGT
Trigger: TGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTG...GCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACATTGGTGATGCACCGATaGCTCTTGCTCAGACACCAC +
Preference number: 3 (lower is better)
Translates to: LAGVAGAAHCALLLAEATLVMHR*LLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAA...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTaGCCACTCAGGAGGGCACATTGGGCCTTGGCAGGC +
Preference number: 3 (lower is better)
Translates to: PTAWGTLRPVEG*PLRRAHWALAG
Trigger: GCCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGTCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: QAHSLGYTQTSRGLPTQESPRQY*PPMVGL
Trigger: CAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...CTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp ACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGGATGTGGACCGAGCCTTaGGGGATCCAGACGACGTCC +
Preference number: 3 (lower is better)
Translates to: TQTSRGLPTQEGTLGLGRMWTEP*GIQTTS
Trigger: GGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACAT...CCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCCC +
Preference number: 3 (lower is better)
Translates to: LHSPLTQMSTVSGRQGVPSPRQY*PPMVGP
Trigger: GGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...TGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR TCA 72 bp GGACCCTGTCACAGCCTACATGCTTGCACTCGCCGCTaGCACAAATGTCCACCGTGTCAGGGCGGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GPCHSLHACTRR*HKCPPCQGGRV
Trigger: CACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp AGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTaGCCCCAATGGTTGGCCTGGGACTGTCGCAGTGAC +
Preference number: 3 (lower is better)
Translates to: RTGAFVSRPDST*PQWLAWDCRSD
Trigger: GTCACTGCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp GGTCCAGGGGGCATAGTGCCAGGAGTAGGGAGGCAGTaGATCCCGGGCAATGGGTGCATTGAAGCGGTAGTG +
Preference number: 3 (lower is better)
Translates to: GPGGIVPGVGRQ*IPGNGCIEAVV
Trigger: CACTACCGCTTCAATGCACCCATTGCCCGGGATGCACTGCCTCCCTACTCCTGGCACTATGCCCCCTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CCAGGCGGCACCACACTGTCACACTTGGCCTCACACTaGTGCATGGTGGATGGCCGCAAGGCTTCAGTGCAC +
Preference number: 3 (lower is better)
Translates to: PGGTTLSHLASH*CMVDGRKASVH
Trigger: GTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTC +
Preference number: 3 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRAAAGML*VMHRLL
Trigger: GAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp CCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCACCACATCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: PLTQMSTVSGRQGVPSTTSPRQY*PPMVGL
Trigger: CAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...TGTGGTGGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGTCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: WPHTAAWWMAARLQCTLESPRQY*PPMVGL
Trigger: CAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGTCACAGCCTACATGCTaGCACTCGCCGCTGACACAA +
Preference number: 3 (lower is better)
Translates to: PSCPLQWDVPCLSLCSRLSQPTC*HSPLTQ
Trigger: TTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGA...CAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGATGGACTCAGGAGGGCACATaGGGCCTTGGCAGGCCTCCA +
Preference number: 3 (lower is better)
Translates to: LTLLHGGWPQGFSALSRWTQEGT*GLGRPP
Trigger: TGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAGT...CCATCTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp AGTAGGGAGGCAGTGCATCCCGGGCAATGGGTGCATTaGAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SREAVHPGQWVH*SGSGEQATLPG
Trigger: CCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCCATTGCCCGGGATGCACTGCCTCCCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp TGCCCACGGGCCCCACAGCCGTTTCCCACGCCATCGTaGTTCATGCCAAATGTGTGCCCGATCTCATGGGCA +
Preference number: 3 (lower is better)
Translates to: CPRAPQPFPTPS*FMPNVCPISWA
Trigger: TGCCCATGAGATCGGGCACACATTTGGCATGAATCACGATGGCGTGGGAAACGGCTGTGGGGCCCGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173030.8
3UTR GCA 72 bp GGCGGCACCACACTGTCACACTTGGCCTCACACTGCTaGATGGTGGATGGCCGCAAGGCTTCAGTGCACTCT +
Preference number: 3 (lower is better)
Translates to: GGTTLSHLASHC*MVDGRKASVHS
Trigger: AGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACACAGGCAGGGCAGAGGTaGGGGTGGATCTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: PTHTAFVLSEIRTQDPVTQAGQR*GWIFPF
Trigger: GAAGGGGAAGATCCACCCCAACCTCTGCCCTGCCTG...TGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GCTGATTTCGGCACTCCACTACTTGGACCTGGCTGCCGCCTGCACACTGGGCTGTGCAGACCTCGCGATTaGACTCCATGCTGGAATCGG +
Preference number: 3 (lower is better)
Translates to: ADFGTPLLGPGCRLHTGLCRPRD*TPCWNR
Trigger: CCGATTCCAGCATGGAGTCAAATCGCGAGGTCTGCA...CAGCCCAGTGTGCAGGCGGCAGCCAGGTCCAAGTAGTGGAGTGCCGAAATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR TCA 72 bp GCAGGAAGGCAGTGCCCAGGGGGCAGAGTAGATCGTTaGTCTGCACTCTTACAAAGGACCACTCGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: AGRQCPGGRVDR*SALLQRTTRWR
Trigger: CCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAACGATCTACTCTGCCCCCTGGGCACTGCCTTCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CTGAGCGGCTACGCACACCAGCGTCACAGCTACGGCTaGAGCGTGACCAGTTTCCTACAACCCAATCTGGTG +
Preference number: 3 (lower is better)
Translates to: LSGYAHQRHSYG*SVTSFLQPNLV
Trigger: CACCAGATTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCGTAGCCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp GCACCAGGGGGCAGTAAGCCACCTTGTTCACATCCTTaGATTCTTCTGGGCCATCTCCAGGCGGCACCACAC +
Preference number: 3 (lower is better)
Translates to: APGGSKPPCSHP*ILLGHLQAAPH
Trigger: GTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGAACAAGGTGGCTTACTGCCCCCTGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp TCTAAGGCTTTTTCCTCTGCAGCAGACACCCGGCGTTaGCACACCACTGAGCGGCTACGCACACCAGCGTCA +
Preference number: 3 (lower is better)
Translates to: SKAFSSAADTRR*HTTERLRTPAS
Trigger: TGACGCTGGTGTGCGTAGCCGCTCAGTGGTGTGCCAACGCCGGGTGTCTGCTGCAGAGGAAAAAGCCTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp GGAACGCTTGTATACTACATGGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGGTCCACCTTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: GTLVYYMGATLF*ATVTFGSTLQG
Trigger: CCCCTGCAAGGTGGACCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCCCATGTAGTATACAAGCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CAA 90 bp TCACATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTCAGGCAGGGCAGAGGTaGGGGTGGATCTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: SHPCILLGHLQAAPHCHTQAGQR*GWIFPF
Trigger: GAAGGGGAAGATCCACCCCAACCTCTGCCCTGCCTG...AGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CGGGCAGGAGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTC +
Preference number: 3 (lower is better)
Translates to: RAGGQRRKLHRIVDGGLAAAGML*VMHRLL
Trigger: GAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC...AGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCTCCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATTCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: CSRLVPGTLAALAGFAAHSPRQY*PPMVGL
Trigger: CAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...ATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATATGTGGACCGAGCCTTaGGGGATCCAGACGACGTCC +
Preference number: 3 (lower is better)
Translates to: CSRLVPGTLAALAGFAAHMWTEP*GIQTTS
Trigger: GGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACAT...ATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp CAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACATGCACCGATTGCTCTaGCTCAGACACCACAGTTCA +
Preference number: 3 (lower is better)
Translates to: QRTTRWRRPGPQLGVHSDMHRLL*LRHHSS
Trigger: TGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCAT...GTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp TACTTGCCCCCAATGGTTGGCCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACACCACCGCCACATGAC +
Preference number: 3 (lower is better)
Translates to: YLPPMVGLGLSQ*RLEDDTPPPHD
Trigger: GTCATGTGGCGGTGGTGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGGGCAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CGTGTCAGGGCGGCAGGGTGTTCCATCCACCACAGCTaGTGCTCGCTCCGTATAAAAGTTGAAGCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: RVRAAGCSIHHS*CSLRIKVEAFC
Trigger: GCAGAAGGCTTCAACTTTTATACGGAGCGAGCAGCAGCTGTGGTGGATGGAACACCCTGCCGCCCTGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp CGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATaGTTGCACTCGCCGCTGACACAAATGTCCACCGTG +
Preference number: 3 (lower is better)
Translates to: RRSEPRTLSQPT*LHSPLTQMSTV
Trigger: CACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp AAGGCAGTGCCCAGGGGGCAGAGTAGATCGTTGATCTaGACTCTTACAAAGGACCACTCGGTGGCGGAGACC +
Preference number: 3 (lower is better)
Translates to: KAVPRGQSRSLI*TLTKDHSVAET
Trigger: GGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAACGATCTACTCTGCCCCCTGGGCACTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp GCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTaGAGGAAGGCAGTGCCCAGGGGGCAGAGTAGATCG +
Preference number: 3 (lower is better)
Translates to: AQVTSHSRWWLG*RKAVPRGQSRS
Trigger: CGATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp AGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTaGCCCCAATGGTTGGCCCCTTTGTCGATAGTGTGT +
Preference number: 3 (lower is better)
Translates to: RTGAFVSRPDST*PQWLAPLSIVC
Trigger: ACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR CAA 90 bp AGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGCAGGCAGGGCAGAGGTaGGGGTGGATCTTCCCCTTC +
Preference number: 3 (lower is better)
Translates to: RDRFRSWMKMWTEPLGIQQAGQR*GWIFPF
Trigger: GAAGGGGAAGATCCACCCCAACCTCTGCCCTGCCTG...CTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TCTGCTAGGCAAGTCAGCGAACAGGCCTTCACACCCCCTCCTCGGTATGTCTTCGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTC +
Preference number: 3 (lower is better)
Translates to: SARQVSEQAFTPPPRYVFAAGML*VMHRLL
Trigger: GAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC...GAAGACATACCGAGGAGGGGGTGTGAAGGCCTGTTCGCTGACTTGCCTAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp TGCCCACGGGCCCCACAGCCGTTTCCCACGCCATCGTaGTTCATGCCAAATCTGAGGAGAAGAGTATCAGCT +
Preference number: 3 (lower is better)
Translates to: CPRAPQPFPTPS*FMPNLRRRVSA
Trigger: AGCTGATACTCTTCTCCTCAGATTTGGCATGAATCACGATGGCGTGGGAAACGGCTGTGGGGCCCGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR TCA 72 bp GTACCTCTCACTCCACAGGCTGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTGTATACTACATGGGGG +
Preference number: 3 (lower is better)
Translates to: VPLTPQAVSRWG*RREERLYTTWG
Trigger: CCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACAGCCTGTGGAGTGAGAGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp GTGTGTGTATGTGAGGTGGACAAGCCTGAGCACTTGTaGACAAGCCAGAGGAGGACATGGGAGGTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: VCVCEVDKPEHL*TSQRRTWEVPC
Trigger: ACAGGGGACCTCCCATGTCCTCCTCTGGCTTGTGCACAAGTGCTCAGGCTTGTCCACCTCACATACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 72 bp AGAGCACTGCATTTCTCTGAAGTCCTGGGAGCCAGGTaGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCG +
Preference number: 3 (lower is better)
Translates to: RALHFSEVLGAR*TVIGVAGPVPS
Trigger: CGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCTGGCTCCCAGGACTTCAGAGAAATGCAGTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp GCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATaGTTGGCCCCTTTGTCGATAGTGTGTGTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: AFVSRPDSTCPQ*LAPLSIVCVWH
Trigger: GTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR CAA 90 bp CATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCAGCTGTGTCATGGTTaGCCACACCATTCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: HPCILLGHLQAAPHCHTWQLCHG*PHHSLG
Trigger: TCCCAGAGAATGGTGTGGCAAACCATGACACAGCTG...CCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: WPHTAAWWMAARLQCTLERPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp CTGCTGAGCTGTCCAGCTGATTTCGGCACTCCACTACTTGGACCTGGCGCCTGCAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: LLSCPADFGTPLLGPGACRPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...GCAGGCGCCAGGTCCAAGTAGTGGAGTGCCGAAATCAGCTGGACAGCTCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR-3UTR CAA 90 bp AGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAATGCACCGATTGCTCTaGCTCAGACACCACAGTTCA +
Preference number: 3 (lower is better)
Translates to: RWTVIGVAGPVPSSLAQTMHRLL*LRHHSS
Trigger: TGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCAT...TGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp AGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGTTGGTGATGCACCGATaGCTCTTGCTCAGACACCAC +
Preference number: 3 (lower is better)
Translates to: RAAAQVTSHSRWWLGCRKLVMHR*LLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAA...CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp GTCATAGCGTGTGATGAGCACAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGATGGCGTTGCCATGGCC +
Preference number: 3 (lower is better)
Translates to: VIACDEHSCVMV*HTILWDGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACACAGCTGTGCTCATCACACGCTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR GCA 72 bp GGGTGCATTGAAGCGGTAGTGGAGAGCAGGCAACTCTaGCTGGGCCAGCACCATGATGATGAGAGATGCATT +
Preference number: 3 (lower is better)
Translates to: GCIEAVVESRQL*LGQHHDDERCI
Trigger: AATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp TCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTaGGTAGCCAGCTCTTCTCCACCCCTTAGTCAGGAG +
Preference number: 3 (lower is better)
Translates to: SLSTGQDTAEGP*VASSSPPLSQE
Trigger: CTCCTGACTAAGGGGTGGAGAAGAGCTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp GATGACCACACGAATGGATTAGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCTGGGTCCTGCCCACGG +
Preference number: 3 (lower is better)
Translates to: DDHTNGLVFMVM*AAMSFAGSCPR
Trigger: CCGTGGGCAGGACCCAGCGAAGCTCATGGCTGCCCACATTACCATGAAGACTAATCCATTCGTGTGGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp CCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTC +
Preference number: 3 (lower is better)
Translates to: PIWWTWFCVAGTLPLGQFAAGML*VMHRLL
Trigger: GAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC...AAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCACAGCCTACATGCTaGCACTCGCCGCTGACACAA +
Preference number: 3 (lower is better)
Translates to: SRQLCLGQHHDDERCINGSQPTC*HSPLTQ
Trigger: TTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGA...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp GGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTaGTGCACCGATTGCTCTTGCTCAGACACCACAGTT +
Preference number: 3 (lower is better)
Translates to: GTVFPQQLGCYW*CTDCSCSDTTV
Trigger: AACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp CACCACAGTTCACTGCAGACCTCCCCGTATTTACACTaGCGCGATTTGACTCCATGCTGGAATCGGCACTGC +
Preference number: 3 (lower is better)
Translates to: HHSSLQTSPYLH*RDLTPCWNRHC
Trigger: GCAGTGCCGATTCCAGCATGGAGTCAAATCGCGTCAGTGTAAATACGGGGAGGTCTGCAGTGAACTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR CCA 72 bp CCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTaGGCTAAAGACACCTTCAATGGTCTCACAGGCACT +
Preference number: 3 (lower is better)
Translates to: PDDVLIPSSWQS*AKDTFNGLTGT
Trigger: AGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp ATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATATGCACCGATTGCTCTaGCTCAGACACCACAGTTCA +
Preference number: 3 (lower is better)
Translates to: IEAVVESRQLCLGQHHDDMHRLL*LRHHSS
Trigger: TGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCAT...ATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp TCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTaGGCACCAGGGGGCAGTAAGCCACCTTGTTCACAT +
Preference number: 3 (lower is better)
Translates to: SGGSRLGYRTEI*APGGSKPPCSH
Trigger: ATGTGAACAAGGTGGCTTACTGCCCCCTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR TCA 72 bp CTATCAAGATCGCCAGAATCTTCCTCTCTCCTCCTGTaGCCCAGCCCTTCAGTTATAGGTGTGCACAGCCTG +
Preference number: 3 (lower is better)
Translates to: LSRSPESSSLLL*PSPSVIGVHSL
Trigger: CAGGCTGTGCACACCTATAACTGAAGGGCTGGGTCACAGGAGGAGAGAGGAAGATTCTGGCGATCTTGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp TTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTaGAGGCACGCTGCCTCTTGGGCAATTTACTGTGGC +
Preference number: 3 (lower is better)
Translates to: FLQPNLVDMVLC*RHAASWAIYCG
Trigger: GCCACAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CCA 72 bp TTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTaGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTC +
Preference number: 3 (lower is better)
Translates to: FGDPDDVLIPSS*QSWAKDTFNGL
Trigger: GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GACACCACAGTTCACTGCAGACCTCGCGATTTGACTCCATGCTGGAATCGGCACAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: DTTVHCRPRDLTPCWNRHRPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...GTGCCGATTCCAGCATGGAGTCAAATCGCGAGGTCTGCAGTGAACTGTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp AGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCATGCACCGATTGCTCTaGCTCAGACACCACAGTTCA +
Preference number: 3 (lower is better)
Translates to: RQLCLGQHHDDERCINGSMHRLL*LRHHSS
Trigger: TGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCAT...GGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGTTGGTGATGCACCGATaGCTCTTGCTCAGACACCAC +
Preference number: 3 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTLVMHR*LLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAA...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCTTGGTGATGCACCGATaGCTCTTGCTCAGACACCAC +
Preference number: 3 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLLVMHR*LLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAA...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR-3UTR CAA 90 bp TGTGTCCAGATGGGGGTGACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCAAGTGCTTTTATCCATaGAGCCATCCGACTGCTAGT +
Preference number: 3 (lower is better)
Translates to: CVQMGVTQRGTLVYYMGAKCFYP*SHPTAS
Trigger: ACTAGCAGTCGGATGGCTCAATGGATAAAAGCACTT...GGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CAA 90 bp CAGTTACCCGCCCTTCTACCCAAGGACATCTACCGAATATGGCCTAACAAGATACGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 3 (lower is better)
Translates to: QLPALLPKDIYRIWPNKIRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...TATCTTGTTAGGCCATATTCGGTAGATGTCCTTGGGTAGAAGGGCGGGTAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 72 bp AGTAGCAGAGACTCTTGGTCCCCCTTTAGGGCCAGGTaGCTCAGGGACAGGTTCAGATCTTGGATGAAAATG +
Preference number: 3 (lower is better)
Translates to: SSRDSWSPFRAR*LRDRFRSWMKM
Trigger: CATTTTCATCCAAGATCTGAACCTGTCCCTGAGTCACCTGGCCCTAAAGGGGGACCAAGAGTCTCTGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR GCA 72 bp ATCAGATACTCTTCATCATCTGCCACAATCAGGCCATaGTGGATGGGGGACAGAAAGCTCGGTTCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: IRYSSSSATIRP*WMGDRKLGSGS
Trigger: AGAGCCTGAACCGAGCTTTCTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp GCCAGAGGAGGACATGGGAGGTCCCCTGTTACTTTCTaGTTTATCTCCTCCAGACTGGATTTCTCACTGAAT +
Preference number: 3 (lower is better)
Translates to: ARGGHGRSPVTF*FISSRLDFSLN
Trigger: ATTCAGTGAGAAATCCAGTCTGGAGGAGATAAAGCAGAAAGTAACAGGGGACCTCCCATGTCCTCCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp ACCTTGCAGGGGTTCAATCAGATACTCTTCATCATCTaGCACAATCAGGCCATGCTGGATGGGGGACAGAAA +
Preference number: 3 (lower is better)
Translates to: TLQGFNQILFII*HNQAMLDGGQK
Trigger: TTTCTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATTGAACCCCTGCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 72 bp ATACAGTGTCCAGTTGACCTTTGGGGTGCAAAGACTTaGCTGCCTATCTCCGCCTCAAAGAAGCAATGTCAT +
Preference number: 3 (lower is better)
Translates to: IQCPVDLWGAKT*LPISASKKQCH
Trigger: ATGACATTGCTTCTTTGAGGCGGAGATAGGCAGCCAAGTCTTTGCACCCCAAAGGTCAACTGGACACTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR-3UTR CAA 90 bp TTTTCCGCGGAAAGGGACACTGTCAAATTCAGAGCACTGCATTTCTCTGAAGTCAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: FSAERDTVKFRALHFSEVRPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...GACTTCAGAGAAATGCAGTGCTCTGAATTTGACAGTGTCCCTTTCCGCGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR-3UTR CAA 90 bp ACATGGGAGGTCCCCTGTTACTTTCTGCTTTATCTCCTCCAGACTGGATTTCTCTTTTTGTCTACGCTCTaGAGACACATGTCCCATTGC +
Preference number: 3 (lower is better)
Translates to: TWEVPCYFLLYLLQTGFLFLSTL*RHMSHC
Trigger: GCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAA...GAGAAATCCAGTCTGGAGGAGATAAAGCAGAAAGTAACAGGGGACCTCCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 72 bp GTTTCTTTCTTCATTATACAGTGTCCAGTTGACCTTTaGGGTGCAAAGACTTGGCTGCCTATCTCCGCCTCA +
Preference number: 3 (lower is better)
Translates to: VSFFIIQCPVDL*GAKTWLPISAS
Trigger: TGAGGCGGAGATAGGCAGCCAAGTCTTTGCACCCCAAAGGTCAACTGGACACTGTATAATGAAGAAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 72 bp AAGGCTTCAGGCTTGATAGCAAGTGCTTTTATCCATTaGGCCATCCGACTGCTAGTGACTTTACGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: KASGLIASAFIH*AIRLLVTLRCY
Trigger: ATAGCACCGTAAAGTCACTAGCAGTCGGATGGCTCAATGGATAAAAGCACTTGCTATCAAGCCTGAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 72 bp CTTTCTGCTTTATCTCCTCCAGACTGGATTTCTCACTaGATCTGGGGCTTGCTTGCTTTTTCCTGGTTAGAC +
Preference number: 3 (lower is better)
Translates to: LSALSPPDWISH*IWGLLAFSWLD
Trigger: GTCTAACCAGGAAAAAGCAAGCAAGCCCCAGATTCAGTGAGAAATCCAGTCTGGAGGAGATAAAGCAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 72 bp TTCAGGGTAGCCTCAAACTCACTGCATAGTTCAGGATaGCTCAGCTTCTACGTCACAAGTACTTGGGATTTG +
Preference number: 3 (lower is better)
Translates to: FRVASNSLHSSG*LSFYVTSTWDL
Trigger: CAAATCCCAAGTACTTGTGACGTAGAAGCTGAGTCATCCTGAACTATGCAGTGAGTTTGAGGCTACCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR TCA 72 bp CCCAACAGTTTCTTTCTTCATTATACAGTGTCCAGTTaGCCTTTGGGGTGCAAAGACTTGGCTGCCTATCTC +
Preference number: 3 (lower is better)
Translates to: PNSFFLHYTVSS*PLGCKDLAAYL
Trigger: GAGATAGGCAGCCAAGTCTTTGCACCCCAAAGGTCAACTGGACACTGTATAATGAAGAAAGAAACTGTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp TTGTTGGCATTTTGGCGGCTTAACTACCCAAGTGTCTaGTATGACTACTCTACAGGCTACTTGTGTGATCTG +
Preference number: 3 (lower is better)
Translates to: LLAFWRLNYPSV*YDYSTGYLCDL
Trigger: CAGATCACACAAGTAGCCTGTAGAGTAGTCATAGCAGACACTTGGGTAGTTAAGCCGCCAAAATGCCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 72 bp GATGACTCAGCTTCTACGTCACAAGTACTTGGGATTTaGGGCATGTCTCACCCCACATCTGGTTTATATTCT +
Preference number: 3 (lower is better)
Translates to: DDSASTSQVLGI*GMSHPTSGLYS
Trigger: AGAATATAAACCAGATGTGGGGTGAGACATGCCCCAAATCCCAAGTACTTGTGACGTAGAAGCTGAGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR GCA 72 bp TCCAGACTGGATTTCTCACTGAATCTGGGGCTTGCTTaGTTTTTCCTGGTTAGACTAGTTGGCTATCAAGAT +
Preference number: 3 (lower is better)
Translates to: SRLDFSLNLGLA*FFLVRLVGYQD
Trigger: ATCTTGATAGCCAACTAGTCTAACCAGGAAAAAGCAAGCAAGCCCCAGATTCAGTGAGAAATCCAGTCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CCA 72 bp TTACCCGCCCTTCTACCCAAGGACATCTACCGAATATaGCCTAACAAGATACATACGATAAGACTGGACATA +
Preference number: 3 (lower is better)
Translates to: LPALLPKDIYRI*PNKIHTIRLDI
Trigger: TATGTCCAGTCTTATCGTATGTATCTTGTTAGGCCATATTCGGTAGATGTCCTTGGGTAGAAGGGCGGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp CCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGTGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PVWLVQRTVRCCWPRPHCARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...ACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CTGGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACAAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LAGVAGAAHCALLLAEATSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...TGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp CCCCCTTTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PPFPHALSSGMSPASACAHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...AGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAAAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRAARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGCTGGCCGGTGTGGCTaGTGCAGCGCACTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLAGRCG*CSALCA
Trigger: AGCGCACAGTGCGCTGCACCAGCCACACCGGCCAGC...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCCACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp ATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTCACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: MLALAADTNVHRVRAAGCHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...ACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp CCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTGGGACTGTCAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: PSSLAQTVLAPNGWPGTVSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...GACAGTCCCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACGGCTTCCAGGCTCTGTaGCTGGTCCGGCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYGFQAL*LVRPLP
Trigger: CGGCAGGGGCCGGACCAGGCACAGAGCCTGGAAGCC...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLMPSPVGCPLPQPVLQVPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...AACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CAGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: QVDSHWCCRTGAFVSRPDGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...GTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGTCTCATGGGCAATGGTaGAAGCCGTGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLSHGQW*KPWPGR
Trigger: TCGGCCTGGCCACGGCTTTCACCATTGCCCATGAGA...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGCACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCACACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLCSRLVPGTLAALAGFAHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...TGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGCACCGCCACATGACCTaGTGCAGTCACCCCATGGAG +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLHRHMT*CSHPME
Trigger: CTCCATGGGGTGACTGCAGCAGGTCATGTGGCGGTG...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GPVPSSLAQTVLAPNGWPAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...AGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCGGGCAATGGGTGCATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGNGCIEAVVESRQLCLGAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...GCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAATGCACCCATTGCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: MLALAADTNVHRVRAAGCWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...ACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LHSPLTQMSTVSGRQGVPWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...TGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGTCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: PVWLVQRTVRCCWPRPHCLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...ACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 72 bp GCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTaGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: AHSLGYTQTSRG*PTQEGTLGLGR
Trigger: CCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp GGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPVPSSLAQTVLAPNGWPRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...AGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: SLMPSPVGCPLPQPVLQVRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...AACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CCTTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTTGGCCTGGGACTGTCTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSLAQTVLAPNGWPGTVSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...GACAGTCCCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp CAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLGVHSDQSRVAHSGGHIPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...AATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: AEATLCGTLTPLTGHPAGSAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...GCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATCGCCACATGACCTGCTaGAGTCACCCCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDRHMTC*SHPMES
Trigger: GGACTCCATGGGGTGACTGCAGCAGGTCATGTGGCG...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGCGCCCAGACAGTACTTaGCCCCAATGGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWRPDST*PQWLAW
Trigger: CCAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTGGAGTAGGGAGGCAGTaGATCCCGGGCAATGGGTGC +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGGVGRQ*IPGNGC
Trigger: GCACCCATTGCCCGGGATGCACTGCCTCCCTACTCC...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AFGDPDDVLIPSSWQSWAPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...AGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QRTTRWRRPGPQLGVHSDGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...GTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGGGCCTTGGCAGGGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TQTSRGLPTQEGTLGLGRDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...CCTGCCAAGGCCCAATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CGCACACCAGCGTCACAGCTACGGCTGCAGCGTGACCAGTTTCCTACAACCCAAAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RTPASQLRLQRDQFPTTQSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...TTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGAGTACTTGCCCCCAATaGTTGGCCTGGGACTGTCGC +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLSTCPQ*LAWDCR
Trigger: GCGACAGTCCCAGGCCAACCATTGGGGGCAAGTACT...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGACTGGGCTGAGCATTTaGTCCAGGGGGCATAGTGCC +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLTGLSI*SRGHSA
Trigger: GGCACTATGCCCCCTGGACCAAATGCTCAGCCCAGT...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTACTCACCCCACTCACTaGTCACCCAGCGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLMPSPVGCPLPQPVLQVTHPTH*SPSGQE
Trigger: CTCCTGCCCGCTGGGTGACCAGTGAGTGGGGTGAGT...AACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTACTGTGCGCTGCTGCTaGCCGAGGCCACACTGTGTG +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGTVRCC*PRPHCV
Trigger: CACACAGTGTGGCCTCGGCCAGCAGCAGCGCACAGT...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp TGTGTCCAGATGGGGGTGACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: CVQMGVTQRGTLVYYMGAGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...GGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR TCA 90 bp CACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: HSPLTQMSTVSGRQGVPSVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...GGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FFWAISRRHHTVTLGLTLSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...CAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRTEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp AGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SHWCCRTGAFVSRPDSTCPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...GCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RAAAQVTSHSRWWLGCRKPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TGTGTCCAGATGGGGGTGACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CVQMGVTQRGTLVYYMGAPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...GGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp GCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AFGDPDDVLIPSSWQSWAPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...AGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCILLGHLQAAPHCHTWPPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...AGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCACCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCSRLVPGTLAALAGFAPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...TGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGCCCGAGTCCAGCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVLSRRPVIQAKPQARVQPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...CTGGACTCGGGCCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: GGQSLVLQDRCLRLSPRQLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...CTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGAGCTTCGCTGGGTCCTaGCCACGGGCCCCACAGCCG +
Preference number: 4 (lower is better)
Translates to: VGYTKSCLGGRLFKQSPRSFAGS*PRAPQP
Trigger: CGGCTGTGGGGCCCGTGGGCAGGACCCAGCGAAGCT...CCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS-3UTR GCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTCACTTGGCCTCACACTaGTGCATGGTGGATGGCCGC +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGHLASH*CMVDGR
Trigger: GCGGCCATCCACCATGCAGCAGTGTGAGGCCAAGTG...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTCGCCATCGTGATTCATaGCAAATAGAAGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTRHRDS*QIEAVQ
Trigger: CTGGACAGCTTCTATTTGGCATGAATCACGATGGCG...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS-3UTR CCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGGGCAGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PRPHCVEHSPHSLVTQRAAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...TGCCCGCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TGTGTCCAGATGGGGGTGACGCAGAGAGGAACGCTTGTATACTACATGGGGGCCCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVQMGVTQRGTLVYYMGAPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...GGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp TCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSRRSEPRTLSQPTCLHSWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...CGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QVDSHWCCRTGAFVSRPDGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...GTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: LGGGDQAHSLGYTQTSRGLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...CCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp ACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TRWRRPGPQLGVHSDQSRSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...CCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACGCTGCAGTCACCCCATaGAGTCCAAGGGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYAAVTP*SPRAPG
Trigger: GCCTGGGGCCCTTGGACTCCATGGGGTGACTGCAGC...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATTGTGGACCGAGCCTTTaGGGATCCAGACGACGTCCT +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDCGPSL*GSRRRP
Trigger: AGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACA...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCTCAGGAGGGCACATTaGGCCTTGGCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVLRRAH*ALAGLQ
Trigger: CTGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAG...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CCCCCTTTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCACACTGCTGCATGGTaGATGGCCGCAAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: PPFPHALSSGMSPASACAHTAAW*MAARLQ
Trigger: CTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTG...AGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CCCCCTTTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCTCACACTGCTGCATaGTGGATGGCCGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPFPHALSSGMSPASACAPHTAA*WMAARL
Trigger: AAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGG...AGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp AAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTaGGGGTACACTCAGACCAGTCGAGGGTTGCCCACT +
Preference number: 4 (lower is better)
Translates to: KGPLGGGDQAHS*GYTQTSRGLPT
Trigger: AGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: FFWAISRRHHTVTLGLTLRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...CAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp ACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: TQSGGHGSVLQARCLLGNGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...ATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QWDVPCLSLCSRLVPGTLALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...TAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GCCTACATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AYMLALAADTNVHRVRAAALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...TGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGTACACTGACGCGATTTaGCTCCATGCTGGAATCGGC +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLYTDAI*LHAGIG
Trigger: GCCGATTCCAGCATGGAGTCAAATCGCGTCAGTGTA...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATCTGGGACTGTCGCAGTaGCGGCTAGAAGATGACACA +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDLGLSQ*RLEDDT
Trigger: TGTGTCATCTTCTAGCCGTCACTGCGACAGTCCCAG...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACGTGTGGGGCCACTGCTaGGCTGTCCAGCTGATTTCG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYVWGHC*AVQLIS
Trigger: CGAAATCAGCTGGACAGCTCAGCAGTGGCCCCACAC...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp CCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PVPGKAGLKTPSMVSQALHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...CAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: VSYNPIWWTWFCVAGTLPARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...AGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GTGTGTGTGTATGTGAGGTGGACAAGCCTGAGCACTTGTGCACAAGCCAGAGGAGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: VCVYVRWTSLSTCAQARGARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...TCCTCTGGCTTGTGCACAAGTGCTCAGGCTTGTCCACCTCACATACACACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp CGCACACCAGCGTCACAGCTACGGCTGCAGCGTGACCAGTTTCCTACAACCCAACTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: RTPASQLRLQRDQFPTTQLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...TTGGGTTGTAGGAAACTGGTCACGCTGCAGCCGTAGCTGTGACGCTGGTGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSCPLQWDVPCLSLCSRLSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...CAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SCPLQWDVPCLSLCSRLVPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...AACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCACCACACCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: PLTQMSTVSGRQGVPSTTPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...TGTGGTGGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PHTHGICPLGDQNPGPCHGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...GTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ICTLTKDHSVAETRPTAWGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...CCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATCTGGCGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QVGSRYPSGLGRFCSTSGDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...GCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 72 bp CAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTaGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QWDVPCLSLCSR*VPGTLAALAGF
Trigger: AAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GCTGGCCGAGGCCACACTGTGTGGAACACTCACCCCACTCACTGGTCACCCAGCGACAGGAGCTCATCTTaGGATCTGAAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: AGRGHTVWNTHPTHWSPSDRSSS*DLKACV
Trigger: CACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTC...GCTGGGTGACCAGTGAGTGGGGTGAGTGTTCCACACAGTGTGGCCTCGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp AGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: RAAAQVTSHSRWWLGCRKRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SRQLCLGQHHDDERCINGGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATCTGGCGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: QVGSRYPSGLGRFCSTSGVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...GCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TTGGGGATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGIQTTSSYPVPGKAGLKSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...CTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELTEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TGGCCTCACACTGCTGCATGGTGGATGGCCGCAAGGCTTCAGTGCACTCTCGAGACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WPHTAAWWMAARLQCTLETEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...CTCGAGAGTGCACTGAAGCCTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYREGQH*PVVVHS
Trigger: CGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCT...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCACCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp ATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: IPSSWQSWAKDTFNGLTGARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...GCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: PLPQPVLQVGSRYPSGLGVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...GCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTTGGGGTACACTCAGACAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QRTTRWRRPGPQLGVHSDSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...GTCTGAGTGTACCCCAAGCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PIWWTWFCVAGTLPLGQFPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...AAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACCGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PSLLFWPLVADQGRGCNTGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...GGTGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp TCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTTCCATCCACCCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: SPLTQMSTVSGRQGVPSTLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...GGTGGATGGAACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp ATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCAGGGTGTAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MLALAADTNVHRVRAAGCSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...ACACCCTGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACGCAGGCAACTCTGCCTaGGCCAGCACCATGATGATG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYAGNSA*ASTMMM
Trigger: CATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGC...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp CTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTaGGCAGGTTTTGCAGCACATCTGGCGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LCSRLVPGTLAA*AGFAAHLAEVG
Trigger: GCCTACTTCCGCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp ATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: IPSSWQSWAKDTFNGLTGGPHRC*RPHGSY
Trigger: GTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCC...GCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp AGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTACTTGCGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SHWCCRTGAFVSRPDSTCVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...GCAAGTACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACCGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLLFWPLVADQGRGCNTVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...GGTGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR TCA 90 bp ATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ILAFFWAISRRHHTVTLGALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...GCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CSRLVPGTLAALAGFAAHALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...ATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PCILLGHLQAAPHCHTWPTEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...AGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp AGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RDRFRSWMKMWTEPLGIQPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...CTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: QLGVHSDQSRVAHSGGHISAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...AATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGAGTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGCATAGCTCTCCAAACTaGACAGGAGCTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: GVCGPQGRACSTMMGNGLHSSPN*TGAHLE
Trigger: CTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATG...CAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGCCGCTGAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRSEPRTLSQPTCLHSPLSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...CAGCGGCGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGCTGAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FWAISRRHHTVTLGLTLLSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...CAGCAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAGCACATCTGGCGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QVGSRYPSGLGRFCSTSGAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...GCCAGATGTGCTGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTACCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCCCAGCGTATAGGCAGTaGGCCCGGGCAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: IPSSWQSWAKDTFNGLTGPAYRQ*ARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGG...GCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TGTGTGTATGTGAGGTGGACAAGCCTGAGCACTTGTGCACAAGCCAGAGGAGGAGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CVYVRWTSLSTCAQARGGAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...TCCTCCTCTGGCTTGTGCACAAGTGCTCAGGCTTGTCCACCTCACATACACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp CCCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHTHGICPLGDQNPGPCHSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...GTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGTTGCCATGGCCACTGTaGCTCACGATGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: QAHSLGYTQTSRGLPTQELPWPL*LTMDFC
Trigger: GCAGAAATCCATCGTGAGCCACAGTGGCCATGGCAA...CTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GTTGATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCCCACAGCTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VDLHSYKGPLGGGDQAHSCHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...GCTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp ATCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTAGCCGGGAGCCACCGTTaGGTACACGAAGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: IFPFVSLGEGYREVVSSLAGSHR*VHEVLS
Trigger: AGACAGGACTTCGTGTACCCAACGGTGGCTCCCGGC...TAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACCAGGTGGACAGTCATTaGTGTTGCAGGACCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYQVDSH*CCRTGA
Trigger: GGCACCGGTCCTGCAACACCAATGACTGTCCACCTG...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCCAGGATGGCTGGCCGGTGTaGCTGGTGCAGCGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SLFTINWARYSRGSLGSQDGWPV*LVQRTV
Trigger: CACAGTGCGCTGCACCAGCCACACCGGCCAGCCATC...CTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp AGCCACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: SHRWVHEVLSRRPVIQAKRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...CTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp ACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVGYTKSCLGGRLFKQSPALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...GGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCTCCCGGCATGGTGGGTaGTCTCCAGGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLSRHGG*SPGWAG
Trigger: ACCAGCCCACCCTGGAGATCACCCACCATGCCGGGA...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACGCTGAGCTGTCCAGCTaGTTTCGGCACTCCACTACT +
Preference number: 4 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYAELSS*FRHSTT
Trigger: AGTAGTGGAGTGCCGAAATCAGCTGGACAGCTCAGC...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp TCTGCTAGGCAAGTCAGCGAACAGGCCTTCACACCCCCTCCTCGGTATGTCTTCAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SARQVSEQAFTPPPRYVFREGQH*PVVVHS
Trigger: CGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCT...GAAGACATACCGAGGAGGGGGTGTGAAGGCCTGTTCGCTGACTTGCCTAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RAAAQVTSHSRWWLGCRKSAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GGGCTTCCAGGCTCTGTGCCTGGTCCGGCCCCTGCCGTAGATGAAATGTGGTTCGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: GLPGSVPGPAPAVDEMWFVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...GAACCACATTTCATCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGCCCGAGTCCAGAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EVLSRRPVIQAKPQARVQSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...CTGGACTCGGGCCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACCTCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: PVYCSGPWLQIRGEGVTPPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...AGGTGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp TGCTCAGACACCACAGTTCACTGCAGACCTCGCGATTTGACTCCATGCTGGAATGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CSDTTVHCRPRDLTPCWNAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...ATTCCAGCATGGAGTCAAATCGCGAGGTCTGCAGTGAACTGTGGTGTCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QRDQFPTTQSGGHGSVLQAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...CTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp AATCAGATACTCTTCATCATCTGCCACAATCAGGCCATGCTGGATGGGGGACAGTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NQILFIICHNQAMLDGGQWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...CTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PHALSSGMSPASACAPGWSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...CCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTAGCCATGAGCTTCGCTaGGTCCTGCCCACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSSHELR*VLPTGP
Trigger: GGGGCCCGTGGGCAGGACCCAGCGAAGCTCATGGCT...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCCAGGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SLFTINWARYSRGSLGSQVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...CTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGGGCTTCCAGGCTCTGTCTCATGGGCAATGGTaGAAGCCGTGGCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QHHDDERCINGSQGFQALSHGQW*KPWPGR
Trigger: TCGGCCTGGCCACGGCTTTCACCATTGCCCATGAGA...CAGAGCCTGGAAGCCCTGGGACCCATTAATGCATCTCTCATCATCATGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp CGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGGCAGTGCCCAAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: RKLHRIVDGGLAAGRQCPREGQH*PVVVHS
Trigger: CGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCT...TGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TTATTCTTCCCTTTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFFPFPSLLFWPLVADQGPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...CCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAAAGGGAAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR GCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTAGCCCGGGCAGCCCTCTaGCAAGCCAGGCCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: RGARDLNMCATRSPLSSLARAAL*QARPSR
Trigger: ACGGGAAGGCCTGGCTTGGCAGAGGGCTGCCCGGGC...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTACTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CAGCGTGACCAGTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: QRDQFPTTQSGGHGSVLQLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...CTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAACTGGTCACGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: CLAQCSLSSWDAIGDAPILPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...AATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TTTGTAGCACCACCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FVAPPFVDSVCLAQCSLSAWPCR*PAYRQW
Trigger: CCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGC...GCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTGCTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 72 bp GCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AAGMLLVMHRLL*LRHHSSLQTSP
Trigger: CGGGGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000173013.8
ENSMUST00000173241.8
3UTR CAA 72 bp TGTGTGTGTGTATGTGAGGTGGACAAGCCTGAGCACTaGTGCACAAGCCAGAGGAGGACATGGGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCEVDKPEH*CTSQRRTWEVP
Trigger: GGGGACCTCCCATGTCCTCCTCTGGCTTGTGCACAAGTGCTCAGGCTTGTCCACCTCACATACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR TCA 90 bp AGGAGGCCGGTTATTCAAGCAAAGCCCCAGGCCCGAGTCCAGAAAGCTGGTGATGACAGGAGCTCATCTTaGGATCTGAAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: RRPVIQAKPQARVQKAGDDRSSS*DLKACV
Trigger: CACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTC...ATCACCAGCTTTCTGGACTCGGGCCTGGGGCTTTGCTTGAATAACCGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp GACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: DVLIPSSWQSWAKDTFNGVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...ACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp AGTAGATCGTTGATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SRSLICTLTKDHSVAETRTEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...CCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAACGATCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp TCACATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTATAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SHPCILLGHLQAAPHCHTIEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTAT...AGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS-3UTR GCA 90 bp TCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTACTGAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: SGGHGSVLQARCLLGNLLREGQH*PVVVHS
Trigger: CGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCT...CAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACACCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATPAPRR*LRKAGG
Trigger: TCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGG...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SRQLCLGQHHDDERCINGSAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp ACATGGGAGGTCCCCTGTTACTTTCTGCTTTATCTCCTCCAGACTGGATTTCTCCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TWEVPCYFLLYLLQTGFLPGDGG*GSGSAG
Trigger: TCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGG...GAGAAATCCAGTCTGGAGGAGATAAAGCAGAAAGTAACAGGGGACCTCCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp GTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTTGCTCAGAGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VPSAAGMLLVMHRLLLLRGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...TCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp GTGTGTGGGCCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATTCAAATTCAGAGCACTaGATTTCTCTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VCGPQGRACSTMMGNGLDSNSEH*ISLKSW
Trigger: CCAGGACTTCAGAGAAATGCAGTGCTCTGAATTTGA...ATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGGCCCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAAGATGGTGGCTTGGCTaGAGGAAGGCAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVRWWLG*RKAVPR
Trigger: CCTGGGCACTGCCTTCCTGCAGCCAAGCCACCATCT...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GCCTACATGCTTGCACTCGCCGCTGACACAAATGTCCACCGTGTCAGGGCGGCACATAGCTCTCCAAACTaGACAGGAGCTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: AYMLALAADTNVHRVRAAHSSPN*TGAHLE
Trigger: CTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATG...TGCCGCCCTGACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGCATGTAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: IEAVVESRQLCLGQHHDDSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...ATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PVPGKAGLKTPSMVSQALAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...CAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCCAGGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLFTINWARYSRGSLGSQAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...CTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GTGTGTGTGTATGTGAGGTGGACAAGCCTGAGCACTTGTGCACAAGCCAGAGGAGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VCVYVRWTSLSTCAQARGAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...TCCTCTGGCTTGTGCACAAGTGCTCAGGCTTGTCCACCTCACATACACACACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp ATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IVCVWHSVPSAAGMLLVMGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...CATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCACCCCCACACACCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: WAKDTFNGLTGTAITPTHLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...GTGTGTGGGGGTGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCCCCAGACTCGAGTCCTaGAAAAGTTTGGCAACAATG +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELPRLES*KSLATM
Trigger: CATTGTTGCCAAACTTTTCCAGGACTCGAGTCTGGG...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTTACTGAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGGHGSVLQARCLLGNLLSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...CAGTAAATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGGCACATTGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: QLGVHSDQSRVAHSGGHIVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...AATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGCCGGGAGCCACCGTTaGGTACACGAAGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QVQILDENVDRAFGDPDDAGSHR*VHEVLS
Trigger: AGACAGGACTTCGTGTACCCAACGGTGGCTCCCGGC...GTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCGATTTGACTCCATGCTaGAATCGGCACTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELDLTPC*NRHCSS
Trigger: TGATGAGCAGTGCCGATTCCAGCATGGAGTCAAATC...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCCGTCTACACCCTCTaGCCGAGAGCCAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSPVYTL*PRAKGD
Trigger: GTCCCCTTTGGCTCTCGGCCAGAGGGTGTAGACGGG...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTGACAGGTTCAGATCTTaGATGAAAATGTGGACCGAG +
Preference number: 4 (lower is better)
Translates to: FPHALSSGMSPASACAPGDRFRS*MKMWTE
Trigger: CTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCAAAGGACCACTCGGTaGCGGAGACCAGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSQRTTR*RRPGPQ
Trigger: CTGTGGGCCTGGTCTCCGCCACCGAGTGGTCCTTTG...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp GCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCGCGA +
Preference number: 4 (lower is better)
Translates to: AAGMLLVMHRLL*LRHHSSLQTSR
Trigger: TCGCGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173030.8
ENSMUST00000173931.8
3UTR CAA 72 bp CCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATaGCTCTTGCTCAGACACCACAGTTCACTGCAGACC +
Preference number: 4 (lower is better)
Translates to: PSAAGMLLVMHR*LLLRHHSSLQT
Trigger: GGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 72 bp CGCCCAGACAGTACTTGCCCCCAATGGTTGGCCCCTTaGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RPDSTCPQWLAP*SIVCVWHSVPS
Trigger: TGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
CDS-3UTR TCA 90 bp CGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTGCAGGAAGGCAGTGCCCAGACAGGAGCTCATCTTaGGATCTGAAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: RKLHRIVDGGLAAGRQCPDRSSS*DLKACV
Trigger: CACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTC...TGGGCACTGCCTTCCTGCAGCCAAGCCACCATCTACTATGCGATGTAACTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TTTGTAGCACCACCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTG +
Preference number: 4 (lower is better)
Translates to: FVAPPFVDSVCLAQCSLSVSRWG*RREERL
Trigger: CAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACAC...GCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTGCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp CCCCAGGGCAGGGCTTGTAGCACCATGATGGGGAACGGCCTGGATGTTGAACTCTGGCAACAATGTTCATaGTGGCCAACACATACTGCT +
Preference number: 4 (lower is better)
Translates to: PQGRACSTMMGNGLDVELWQQCS*WPTHTA
Trigger: AGCAGTATGTGTTGGCCATCATGAACATTGTTGCCA...GAGTTCAACATCCAGGCCGTTCCCCATCATGGTGCTACAAGCCCTGCCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CGGGCAGGAGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTTGGCAACAATGTTCATaGTGGCCAACACATACTGCT +
Preference number: 4 (lower is better)
Translates to: RAGGQRRKLHRIVDGGLAWQQCS*WPTHTA
Trigger: AGCAGTATGTGTTGGCCATCATGAACATTGTTGCCA...AGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCTCCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp ATCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTATTTCCCACGCCATCGTaGTTCATGCCAAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: IFPFVSLGEGYREVVSSLFPTPS*FMPNVC
Trigger: GCACACATTTGGCATGAATCACGATGGCGTGGGAAA...TAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCTTGCACTCGCCGCTaGCACAAATGTCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVACTRR*HKCPPC
Trigger: ACACGGTGGACATTTGTGTCAGCGGCGAGTGCAAGC...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAGCCTGCACACTGGGCTaGGCATTTGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATACTLG*AFGPGG
Trigger: GCCCCCTGGACCAAATGCTCAGCCCAGTGTGCAGGC...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCG +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPREGQH*PVVVHS
Trigger: CGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCT...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp GAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: ESRQLCLGQHHDDERCINSAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...ATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TCCCAACAGTTTCTTTCTTCATTATACAGTGTCCAGTTGACCTTTGGGGTGCAACACCGAGACGTGCCCTaGCAGGAGACGGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SQQFLSSLYSVQLTFGVQHRDVP*QETGAA
Trigger: CGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTG...TTGCACCCCAAAGGTCAACTGGACACTGTATAATGAAGAAAGAAACTGTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CGGGCAGGAGGGCAGCGGCGCAAGTTACATCGCATAGTAGATGGTGGCTTGGCTATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: RAGGQRRKLHRIVDGGLAILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...AGCCAAGCCACCATCTACTATGCGATGTAACTTGCGCCGCTGCCCTCCTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGACAGTCATTGGTGTTaGAGGACCGGTGCCTTCGTC +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWDSHWC*RTGAFV
Trigger: GACGAAGGCACCGGTCCTGCAACACCAATGACTGTC...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAAGACCAGTCGAGGGTTaGCCACTCAGGAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVRPVEG*PLRRAH
Trigger: ATGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCT...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTACATGCTTGCACTCGGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: SSRRSEPRTLSQPTCLHSVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...CGAGTGCAAGCATGTAGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp CCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACCGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: PSLLFWPLVADQGRGCNTVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...GGTGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp TTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPSLLFWPLVADQGRGCNSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...GTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp ATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: MKMWTEPLGIQTTSSYPVAGSEC*VRPPCR
Trigger: TCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGC...AACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GTTTCCTACAACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: VSYNPIWWTWFCVAGTLPLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...AGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGTTGTAGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: FPVYCSGPWLQIRGEGVTLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...TGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGAGTGACTTCCCGGCATaGTGGGTGATCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTSDFPA*WVISRV
Trigger: CACCCTGGAGATCACCCACCATGCCGGGAAGTCACT...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTTGGCCTCACACTGGATTTGACTCCATGCTaGAATCGGCACTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FFWAISRRHHTVTLGLTLDLTPC*NRHCSS
Trigger: TGATGAGCAGTGCCGATTCCAGCATGGAGTCAAATC...CAGTGTGAGGCCAAGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACTCGATAGTGTGTGTTTaGCACAGTGTTCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYSIVCV*HSVPSA
Trigger: TGCTGAGGGAACACTGTGCCAAACACACACTATCGA...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCCAGGCTCTGTGCCTaGTCCGGCCCCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: RGARDLNMCATRSPLSSLSRLCA*SGPCRR
Trigger: TCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGA...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp GTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTCTTGCTCAGACACCAC +
Preference number: 4 (lower is better)
Translates to: VWHSVPSAAGML*VMHRLLLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
3UTR CAA 72 bp TTCGTCTCTCGCCCAGACAGTACTTGCCCCCAATGGTaGGCCCCTTTGTCGATAGTGTGTGTTTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: FVSRPDSTCPQW*APLSIVCVWHS
Trigger: ACTGTGCCAAACACACACTATCGACAAAGGGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGAGAGACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
3UTR CAA 72 bp GCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTaGCTCAGACACCACAGTTCACTGCAGACCTCACTG +
Preference number: 4 (lower is better)
Translates to: AAGMLLVMHRLL*LRHHSSLQTSL
Trigger: CAGTGAGGTCTGCAGTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS-3UTR TCA 90 bp CCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCAGACAGGAGCTCATCTTaGGATCTGAAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: PGKAGLKTPSMVSQALPSDRSSS*DLKACV
Trigger: CACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTC...TGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp TCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCAACAGAAGCTGTCCAGTaGCTTCCCGGCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SSYPVPGKAGLKTPSMVSTEAVQ*LPGMVG
Trigger: ACCCACCATGCCGGGAAGTCACTGGACAGCTTCTGT...TGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCCTTTCCCACGCCATCGTaGTTCATGCCAAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GNSAWASTMMMRDALMGPFPTPS*FMPNVC
Trigger: GCACACATTTGGCATGAATCACGATGGCGTGGGAAA...GGGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACACTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGCCTGTGCTCCAGGTTGGTTCCAGGTACCCTAGCGGCCTTGGCAGGTTTTGCAATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLCSRLVPGTLAALAGFAILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...TGCAAAACCTGCCAAGGCCGCTAGGGTACCTGGAACCAACCTGGAGCACAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTGGGCCAGGCCTAGAGTaGCGCAGGGTTTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSGPGLE*RRVCSC
Trigger: ACAAGAACAAACCCTGCGGCACTCTAGGCCTGGCCC...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGGCCGGTGTGGCTGGTaGAGCGCACTGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTGRCGW*SALCAA
Trigger: AGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGGAGGCCGGTTATTCAAGCAAAGCCCCAGGCCCGAGTCCAGAAAGCTGGTGATCATAGCTCTCCAAACTaGACAGGAGCTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: RRPVIQAKPQARVQKAGDHSSPN*TGAHLE
Trigger: CTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATG...ATCACCAGCTTTCTGGACTCGGGCCTGGGGCTTTGCTTGAATAACCGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTTGGGAGCTACCAGCCTaGCCCTGCAGGTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTWELPA*PCRWPA
Trigger: CGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCA...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTACTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGCTCTTCAGGCCCAGCTaGCCTCGCTCAGATTCATTC +
Preference number: 4 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTLFRPS*PRSDSF
Trigger: GAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGAG...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTACCCCAATGGTTGGCCTaGGACTGTCGCAGTGACGGC +
Preference number: 4 (lower is better)
Translates to: RGARDLNMCATRSPLSSLPQWLA*DCRSDG
Trigger: GCCGTCACTGCGACAGTCCCAGGCCAACCATTGGGG...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTAGGCACGCTGCCTCTTaGGCAATTTACTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPRHAAS*AIYCGH
Trigger: GTGGCCACAGTAAATTGCCCAAGAGGCAGCGTGCCT...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCGGCCTCCAGCACAGGTaGGCGTGGCTGTGGACAGGC +
Preference number: 4 (lower is better)
Translates to: YTRQNFINVRLLGEECVGGLQHR*AWLWTG
Trigger: GCCTGTCCACAGCCACGCCCACCTGTGCTGGAGGCC...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTCCACACTGTCACACTTaGCCTCACACTGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPPHCHT*PHTAAW
Trigger: CCATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGG...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAATCCTTGCATTCTTCTaGGCCATCTCCAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVILAFF*AISRRH
Trigger: GTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGAT...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGGAGTCCTGGAAAAGTTTaGCAACCTGACAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: RPTAWGTLRPVEGCPLRRSPGKV*QPDNVH
Trigger: ATGAACATTGTCAGGTTGCCAAACTTTTCCAGGACT...CCTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CAA 72 bp ACTCTCTTCTGGGCCACGGTGACCTTTGGGTCCACCTaGCAGGGGTTCAATCAGATACTCTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: TLFWATVTFGST*QGFNQILFIIC
Trigger: GCAGATGATGAAGAGTATCTGATTGAACCCCTGCAAGGTGGACCCAAAGGTCACCGTGGCCCAGAAGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR TCA 90 bp TTTATTCTTCCCTTTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FILPFSQFIVLAPGCRSGALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...CCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAAAGGGAAGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR TCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGTCCCCGTATTTACACTaGCGCGATTTGACTCCATGC +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSPYLH*RDLTPC
Trigger: GCATGGAGTCAAATCGCGTCAGTGTAAATACGGGGA...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp CAGTTACCCGCCCTTCTACCCAAGGACATCTACCGAATATGGCCTAACAAGATATCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: QLPALLPKDIYRIWPNKISAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...TATCTTGTTAGGCCATATTCGGTAGATGTCCTTGGGTAGAAGGGCGGGTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp GGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCCAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GNSAWASTMMMRDALMGPSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...GGGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGTGCACCGATTGCTCTTaGTCAGACACCACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWCTDCS*SDTTVH
Trigger: GTGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCA...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCCATAGCTCTCCAAACTaGACAGGAGCTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: DPDDVLIPSSWQSWAKDTHSSPN*TGAHLE
Trigger: CTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATG...GGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GATTTCTCACTGAATCTGGGGCTTGCTTGCTTTTTCCTGGTTAGACTAGTTGGCCCTCCGGAAGGCAGGTaGAGAGAAGGCCAGCATTGC +
Preference number: 4 (lower is better)
Translates to: DFSLNLGLACFFLVRLVGPPEGR*REGQHC
Trigger: GCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGG...GCCAACTAGTCTAACCAGGAAAAAGCAAGCAAGCCCCAGATTCAGTGAGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp GGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGTCCCCCCAGACTCGAGTCCTaGAAAAGTTTGGCAACAATG +
Preference number: 4 (lower is better)
Translates to: GNSAWASTMMMRDALMGPPRLES*KSLATM
Trigger: CATTGTTGCCAAACTTTTCCAGGACTCGAGTCTGGG...GGGACCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTATTGCCATGGCCACTGTaGCTCACGATGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVLPWPL*LTMDFC
Trigger: GCAGAAATCCATCGTGAGCCACAGTGGCCATGGCAA...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp ATTGAAGCGGTAGTGGAGAGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATAGCACAGCTGTGTCATaGTTTGCCACACCATTCTCT +
Preference number: 4 (lower is better)
Translates to: IEAVVESRQLCLGQHHDDSTAVS*FATPFS
Trigger: AGAGAATGGTGTGGCAAACCATGACACAGCTGTGCT...ATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCTCTCCACTACCGCTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GCAGCACATCTGGCGGAAGTAGGCTCGGCTACAGAACTGAAATTTGAGCACCAGGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: AAHLAEVGSATELKFEHQVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...CTGGTGCTCAAATTTCAGTTCTGTAGCCGAGCCTACTTCCGCCAGATGTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTGACAGGAGCTCATCTTaGGATCTGAAGGCATGCGTG +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSDRSSS*DLKACV
Trigger: CACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTC...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR TCA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGGGCCGATATCTTCATTaGTACTGCAGCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTGRYLH*YCSSSH
Trigger: GTGAGAGGAGCTGCAGTATCAATGAAGATATCGGCC...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWSCVMV*HTILWD
Trigger: ATCCCAGAGAATGGTGTGGCAAACCATGACACAGCT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: DRFRSWMKMWTEPLGIQTVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...CGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGGGGCCACTCTCTTCTaGGCCACGGTGACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTGATLF*ATVTFG
Trigger: CCCAAAGGTCACCGTGGCCCAGAAGAGAGTGGCCCC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGACTTCCCGGCATGGTaGGTGATCTCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTDFPAW*VISRVG
Trigger: GCCCACCCTGGAGATCACCCACCATGCCGGGAAGTC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACATGCCACACCATTCTCTaGGATGGCGTTGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATCHTIL*DGVAMA
Trigger: GGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCA...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTTGTTCCCTCAGCAGCTaGGATGCTATTGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPCSLSS*DAIGDA
Trigger: TGCATCACCAATAGCATCCCAGCTGCTGAGGGAACA...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTaGGGGATCCAGACGACGTCCTCATACCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RFRSWMKMWTEP*GIQTTSSYPVP
Trigger: AGGAACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGCGCTCTCTGCTGACTaGTCTCTTCAGGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTALSAD*SLQAQL
Trigger: CAGCTGGGCCTGAAGAGATCAGTCAGCAGAGAGCGC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTGGCCGATATCTTCATTaGTACTGCAGCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: RSKGGRGARDLNMCATRSGRYLH*YCSSSH
Trigger: GTGAGAGGAGCTGCAGTATCAATGAAGATATCGGCC...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGCAGAGTAGATCGTTaGTCTGCACTCTTACAAAGG +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPGRVDR*SALLQR
Trigger: CCTTTGTAAGAGTGCAGATCAACGATCTACTCTGCC...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTATACAGAACTGAAATTTaGGCACCAGGGGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVYRTEI*APGGSK
Trigger: CTTACTGCCCCCTGGTGCTCAAATTTCAGTTCTGTA...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp ATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCACAGGCTTTCCCACGCCATCGTaGTTCATGCCAAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: IPSSWQSWAKDTFNGLTGFPTPS*FMPNRS
Trigger: GCTTCTATTTGGCATGAATCACGATGGCGTGGGAAA...GCCTGTGAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS-3UTR GCA 90 bp ATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATCACTGTCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGG +
Preference number: 4 (lower is better)
Translates to: ILYDPCLQVNEALEFNHCLPAWP*RWPAYR
Trigger: CCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAG...ACAGTGATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp TCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCCAGATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLFTINWARYSRGSLGSQILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...CTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp AGCAGGCAACTCTGCCTGGGCCAGCACCATGATGATGAGAGATGCATTAATGGGATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SRQLCLGQHHDDERCINGILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...CCCATTAATGCATCTCTCATCATCATGGTGCTGGCCCAGGCAGAGTTGCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTCATGATGATGAGAGATaGATTAATGGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPHDDER*INGSQG
Trigger: GCCCTGGGACCCATTAATGCATCTCTCATCATCATG...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGCTGCAGGAAGGCAGTaGCCAGGGGGCAGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTAAGRQ*PGGRVD
Trigger: ATCTACTCTGCCCCCTGGGCACTGCCTTCCTGCAGC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AATCAGATACTCTTCATCATCTGCCACAATCAGGCCATGCTGGATGGGGGACAGGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: NQILFIICHNQAMLDGGQVVHSS*EGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCAC...CTGTCCCCCATCCAGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp AGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGCACTGTGGCTCACGATaGATTTCTGCCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: RDRFRSWMKMWTEPLGIQHCGSR*ISATYR
Trigger: TCTGTAAGTGGCAGAAATCCATCGTGAGCCACAGTG...CTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
3UTR CAA 72 bp TCGTTTGTAGCACCACCCTTTGTCGATAGTGTGTGTTaGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATT +
Preference number: 4 (lower is better)
Translates to: SFVAPPFVDSVC*AQCSLSSWDAI
Trigger: AATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTGCTACAAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR TCA 90 bp ATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATAGGTTCAGCAGGAAGTaGGTGCTGGGTGCGGCCACC +
Preference number: 4 (lower is better)
Translates to: ICILYDPCLQVNEALEFNRFSRK*VLGAAT
Trigger: GGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCT...ATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTTCAGCAGGAAGTGAGTaGTGGGTGCGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTSAGSE*WVRPPC
Trigger: ACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGA...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp TGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTATACTCTTCATCATCTaGCACAATCAGGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: CLAQCSLSSWDAIGDAPIILFII*HNQAMQ
Trigger: CTGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...AATCGGTGCATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR GCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACACGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTACGCGATTTGACTCCATaGTGGAATCGGCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGARDLNMCATRSPLSSLRDLTP*WNRHCS
Trigger: TGAGCAGTGCCGATTCCAGCATGGAGTCAAATCGCG...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR GCA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCTTGGCCTCACACTGCTaGATGGTGGATGGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: YTRQNFINVRLLGEECVGLASHC*MVDGRK
Trigger: CTTGCGGCCATCCACCATGCAGCAGTGTGAGGCCAA...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR GCA 90 bp TTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACATACTCTTCATCATCTaGCACAATCAGGCCATGCTT +
Preference number: 4 (lower is better)
Translates to: FPSLLFWPLVADQGRGCNILFII*HNQAML
Trigger: AAGCATGGCCTGATTGTGGCAGATGATGAAGAGTAT...GTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTAGTTCCTGGCAAAGCTaGGCTAAAGACACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPSSWQS*AKDTFN
Trigger: ATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACT...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp GTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGAGTCCTGGAAAAGTTTaGCAACCTGACAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: VGYTKSCLGGRLFKQSPRSPGKV*QPDNVH
Trigger: ATGAACATTGTCAGGTTGCCAAACTTTTCCAGGACT...CCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp TCACATCCTTGCATTCTTCTGGGCCATCTCCAGGCGGCACCACACTGTCACACTAGTCCTGGAAAAGTTTaGCAACCTGACAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: SHPCILLGHLQAAPHCHTSPGKV*QPDNVH
Trigger: ATGAACATTGTCAGGTTGCCAAACTTTTCCAGGACT...AGTGTGACAGTGTGGTGCCGCCTGGAGATGGCCCAGAAGAATGCAAGGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
3UTR CAA 72 bp ATCTCCGCCTCAAAGAAGCAATGTCATATAACCTCCTaGTCCATCCCCAAAGGCACAGGAGTACCTCTCACT +
Preference number: 4 (lower is better)
Translates to: ISASKKQCHITS*SIPKGTGVPLT
Trigger: AGTGAGAGGTACTCCTGTGCCTTTGGGGATGGACAAGGAGGTTATATGACATTGCTTCTTTGAGGCGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR GCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTATCCCGGGCAATGGGTaGATTGAAGCGGTAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTIPGNG*IEAVVE
Trigger: CTCCACTACCGCTTCAATGCACCCATTGCCCGGGAT...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTAGTCTTCATGGTAATGTaGGCAGCCATGAGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RGARDLNMCATRSPLSSLVFMVM*AAMSFA
Trigger: AGCGAAGCTCATGGCTGCCCACATTACCATGAAGAC...TAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000174348.8
CDS-3UTR CCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGTCCTGGGAGCCAGGTaGACAGTCATTGGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTVLGAR*TVIGVA
Trigger: TGCAACACCAATGACTGTCCACCTGGCTCCCAGGAC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAACATCGCATAGTAGATaGTGGCTTGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATTSHSR*WLGCRK
Trigger: CTTCCTGCAGCCAAGCCACCATCTACTATGCGATGT...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CCA 90 bp AGCCACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGAGTCCTGGAAAAGTTTaGCAACCTGACAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: SHRWVHEVLSRRPVIQAKSPGKV*QPDNVH
Trigger: ATGAACATTGTCAGGTTGCCAAACTTTTCCAGGACT...CTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp ATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATCACTGTAGCATTGCCCCGTTGTaGTCCACTCGAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILYDPCLQVNEALEFNHCSIAPL*STRVGK
Trigger: CTTCCCAACTCGAGTGGACCACAACGGGGCAATGCT...ACAGTGATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CCA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACATCTTGGATGAAAATGTaGACCGAGCCTTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: IFRSKGGRGARDLNMCATSWMKM*TEPLGI
Trigger: GATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGA...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR TCA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCAGTCCAGAAAGCTGGTaGTGTAGTCTCGACTACACG +
Preference number: 4 (lower is better)
Translates to: YTRQNFINVRLLGEECVGSPESW*CSLDYT
Trigger: CGTGTAGTCGAGACTACATCACCAGCTTTCTGGACT...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
3UTR CAA 72 bp CATCCGACTGCTAGTGACTTTACGGTGCTATGCTTTTaGTCTACGCTCTTGAGACACATGTCCCATTGCTTT +
Preference number: 4 (lower is better)
Translates to: HPTASDFTVLCF*STLLRHMSHCF
Trigger: AAAGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAAGCATAGCACCGTAAAGTCACTAGCAGTCGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR TCA 90 bp TTTATTCTTCCCTTTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGCACTTACAATGTTCATaGTGGCCAACACATACTGCT +
Preference number: 4 (lower is better)
Translates to: FILPFSQFIVLAPGCRSGHLQCS*WPTHTA
Trigger: AGCAGTATGTGTTGGCCATCATGAACATTGTAAGTG...CCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAAAGGGAAGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CCA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCCATAGCTCTCCAAACTaGACAGGAGCTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: YTRQNFINVRLLGEECVGHSSPN*TGAHLE
Trigger: CTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATG...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CCA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTCACTGTGGCTCACGATaGATTTCTGCCACTTACAGA +
Preference number: 4 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTHCGSR*ISATYR
Trigger: TCTGTAAGTGGCAGAAATCCATCGTGAGCCACAGTG...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
3UTR CAA 72 bp TCCCAACAGTTTCTTTCTTCATTATACAGTGTCCAGTaGACCTTTGGGGTGCAAAGACTTGGCTGCCTATCT +
Preference number: 4 (lower is better)
Translates to: SQQFLSSLYSVQ*TFGVQRLGCLS
Trigger: AGATAGGCAGCCAAGTCTTTGCACCCCAAAGGTCAACTGGACACTGTATAATGAAGAAAGAAACTGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
3UTR CAA 72 bp AGTGACTTTACGGTGCTATGCTTTTTGTCTACGCTCTaGAGACACATGTCCCATTGCTTTCAGCCTTACATA +
Preference number: 4 (lower is better)
Translates to: SDFTVLCFLSTL*RHMSHCFQPYI
Trigger: TATGTAAGGCTGAAAGCAATGGGACATGTGTCTCAAGAGCGTAGACAAAAAGCATAGCACCGTAAAGTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS GCA 90 bp CCCCCACAGGTGCTGACGGCCACATGGGAGCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGGCAGTGGGCCCGGGCAGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PPQVLTATWELPAWP*RWPAYRQWARAALC
Trigger: GCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS CCA 90 bp CAGGTGCTGACGGCCACATGGGAGCTACCAGCCTGGCCCTGCAGGTaGCCAGCGTATAGGCAGTGGGCCCGGGCAGCCCTCTGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: QVLTATWELPAWPCR*PAYRQWARAALCQA
Trigger: GGCTTGGCAGAGGGCTGCCCGGGCCCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCATGTGGCCGTCAGCACCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS GCA 90 bp GTGTCCAGTATTCCACCGAGACGTGCCCTGCCAGGAGACGGGGGCTaGGGGTCAGGTTCAGCAGGAAGTGAGTGCTGGGTGCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: VSSIPPRRALPGDGG*GSGSAGSECWVRPP
Trigger: AGGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCTGACCCGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTGGAATACTGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS-3UTR CAA 90 bp GGCCGGTGTGGCTGGTGCAGCGCACTGTGCGCTGCTGCTGGCCGAGGCCACACTGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: GRCGWCSALCAAAGRGHTGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...AGTGTGGCCTCGGCCAGCAGCAGCGCACAGTGCGCTGCACCAGCCACACCGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CCCCCTTTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTAAGGCATGCGTGACCTaGAATGTGAGGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PPFPHALSSGMSPASACAKACVT*NVRPSP
Trigger: GGGGCTGGGCCTCACATTCAAGGTCACGCATGCCTT...AGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGTCGCCCAGACAGTACTaGCCCCCAATGGTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PSCPLQWDVPCLSLCSRLSPRQY*PPMVGL
Trigger: CAGGCCAACCATTGGGGGCAAGTACTGTCTGGGCGA...CAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTCAGACCAGTCGAGGGTaGCCCACTCAGGAGGGCACA +
Preference number: 5 (lower is better)
Translates to: FPHALSSGMSPASACAPGQTSRG*PTQEGT
Trigger: TGTGCCCTCCTGAGTGGGCAACCCTCGACTGGTCTG...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS CCA 90 bp TCTTCAGGCCCAGCTGGCCTCGCTCAGATTCATTCCCCAGGGGCCTaGCAGGTGGTGGCTTCAGGGTACGTAACCACCATGGACGACCCT +
Preference number: 5 (lower is better)
Translates to: SSGPAGLAQIHSPGA*QVVASGYVTTMDDP
Trigger: AGGGTCGTCCATGGTGGTTACGTACCCTGAAGCCACCACCTGCCAGGCCCCTGGGGAATGAATCTGAGCGAGGCCAGCTGGGCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
CDS-3UTR CAA 90 bp GGGCTTCCAGGCTCTGTGCCTGGTCCGGCCCCTGCCGTAGATGAAATGTGGTTCAAGGCATGCGTGACCTaGAATGTGAGGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GLPGSVPGPAPAVDEMWFKACVT*NVRPSP
Trigger: GGGGCTGGGCCTCACATTCAAGGTCACGCATGCCTT...GAACCACATTTCATCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp GGGCTTCCAGGCTCTGTGCCTGGTCCGGCCCCTGCCGTAGATGAAATGTGGTTCGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: GLPGSVPGPAPAVDEMWFERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...GAACCACATTTCATCTACGGCAGGGGCCGGACCAGGCACAGAGCCTGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TCTTCCCCTTCGTCAGTCTGGGGGAGGGCTACAGGGAGGTGGTATCAAGCCTACAGGGCACATTGGGCCTaGGCAGGCCTCCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: SSPSSVWGRATGRWYQAYRAHWA*AGLQHR
Trigger: CCTGTGCTGGAGGCCTGCCAAGGCCCAATGTGCCCT...GTAGGCTTGATACCACCTCCCTGTAGCCCTCCCCCAGACTGACGAAGGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp TTCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTCGGCCTTGGCAGGTTTaGCAGCACATCTGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: FPHALSSGMSPASACAPGRPWQV*QHIWRK
Trigger: CTTCCGCCAGATGTGCTGCAAAACCTGCCAAGGCCG...ACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS GCA 90 bp ACCCCGACGCTGCCTCCGGAAGGCAGGTGGAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCGAGTTGGGAAGGCAATCTCATAGCT +
Preference number: 5 (lower is better)
Translates to: TPTLPPEGRWREGQH*PVVVHSSWEGNLIA
Trigger: AGCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGGCAGCGTCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS-3UTR CAA 90 bp CCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PSCPLQWDVPCLSLCSRLRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...CAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp AGGTGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: RWTVIGVAGPVPSSLAQTERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...TGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGCCTGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: HTRHLSSRRSEPRTLSQPERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...AGGCTGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TCGGCACTCCACTACTTGGACCTGGCGCCTGCACACTGGGCTGAGCATTTGGTCCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SALHYLDLAPAHWAEHLVRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...GACCAAATGCTCAGCCCAGTGTGCAGGCGCCAGGTCCAAGTAGTGGAGTGCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173241.8
CDS-3UTR CAA 90 bp TCCCTCATGCCCTCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: SLMPSPVGCPLPQPVLQVRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...AACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGAGGGCATGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp CAGGCCCACAGCTTGGGGTACACTCAGACCAGTCGAGGGTTGCCCACTCAGGAGCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: QAHSLGYTQTSRGLPTQERVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...CTCCTGAGTGGGCAACCCTCGACTGGTCTGAGTGTACCCCAAGCTGTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACATAGTAGATGGTGGCTaGGCTGCAGGAAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYIVDGG*AAGRQC
Trigger: GCACTGCCTTCCTGCAGCCAAGCCACCATCTACTAT...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp GATCCAGACGACGTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCAAGGCATGCGTGACCTaGAATGTGAGGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: DPDDVLIPSSWQSWAKDTKACVT*NVRPSP
Trigger: GGGGCTGGGCCTCACATTCAAGGTCACGCATGCCTT...GGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGACGTCGTCTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TGGGCTAAAGACACCTTCAATGGTCTCACAGGCACTGCCATCACCCCCACACACAAGGCATGCGTGACCTaGAATGTGAGGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WAKDTFNGLTGTAITPTHKACVT*NVRPSP
Trigger: GGGGCTGGGCCTCACATTCAAGGTCACGCATGCCTT...GTGTGTGGGGGTGATGGCAGTGCCTGTGAGACCATTGAAGGTGTCTTTAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TCTCCAGTGGGATGTCCCCTGCCTCAGCCTGTGCTCCAGGTTGGTTCCAGGTACCAGCTGTGTCATGGTTaGCCACACCATTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SPVGCPLPQPVLQVGSRYQLCHG*PHHSLG
Trigger: TCCCAGAGAATGGTGTGGCAAACCATGACACAGCTG...GTACCTGGAACCAACCTGGAGCACAGGCTGAGGCAGGGGACATCCCACTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS GCA 90 bp TTTGGGTCCACCTTGCAGGGGTTCAATCAGATACTCTTCATCATCTaGCACAATCAGGCCATGCAGGCCCCCACAGGTGCTGACGGCCAC +
Preference number: 5 (lower is better)
Translates to: FGSTLQGFNQILFII*HNQAMQAPTGADGH
Trigger: GTGGCCGTCAGCACCTGTGGGGGCCTGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATTGAACCCCTGCAAGGTGGACCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp AGCCACCGTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGAAGGCATGCGTGACCTaGAATGTGAGGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SHRWVHEVLSRRPVIQAKKACVT*NVRPSP
Trigger: GGGGCTGGGCCTCACATTCAAGGTCACGCATGCCTT...CTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAACGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACACCCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PSLLFWPLVADQGRGCNTRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...GGTGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS CCA 90 bp AGGTGGAGAGAAGGCCAGCATTGCCCCGTTGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCTCTCCAAACTGGACAGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: RWREGQHCPVVVHSS*EGNLIALQTGQELI
Trigger: GATGAGCTCCTGTCCAGTTTGGAGAGCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS CCA 90 bp GCGTGTGATGAGCACAGCTGTGTCATGGTTTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCCACTGTGGCTCACGATGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: ACDEHSCVMVCHTIL*DGVAMATVAHDGFL
Trigger: CAGAAATCCATCGTGAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACACAGCTGTGCTCATCACACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp CCCACACACACGGCATTTGTCCTCTCGGAGATCAGAACCCAGGACCCTGTCACAGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: PTHTAFVLSEIRTQDPVTGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...TGTGACAGGGTCCTGGGTTCTGATCTCCGAGAGGACAAATGCCGTGTGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TGGACAGTCATTGGTGTTGCAGGACCGGTGCCTTCGTCTCTCGCCCAGACAGTAGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: WTVIGVAGPVPSSLAQTVGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...TACTGTCTGGGCGAGAGACGAAGGCACCGGTCCTGCAACACCAATGACTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PNLVDMVLCCRHAASWAIRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...AATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CAAGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTTTCTCTGGGATGGCGTaGCCATGGCCACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: QGVLSLHYQLGKIQQRVPFSGMA*PWPLWL
Trigger: GAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAA...AGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp GTCCTCATACCCAGTTCCTGGCAAAGCTGGGCTAAAGACACCTTCAATGGTCTCTTCTCTGGGATGGCGTaGCCATGGCCACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VLIPSSWQSWAKDTFNGLFSGMA*PWPLWL
Trigger: GAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAA...GAGACCATTGAAGGTGTCTTTAGCCCAGCTTTGCCAGGAACTGGGTATGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTACTCAGGAGGGCACATaGGGCCTTGGCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RSKGGRGARDLNMCATRSTQEGT*GLGRPP
Trigger: TGGAGGCCTGCCAAGGCCCAATGTGCCCTCCTGAGT...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS GCA 90 bp GATGCAGATGTCATAGCGTGTGATGAGCACAGCTGTGTCATGGTTTaGCACACCATTCTCTGGGATGGCGTTGCCATGGCCACTGTGGCT +
Preference number: 5 (lower is better)
Translates to: DADVIACDEHSCVMV*HTILWDGVAMATVA
Trigger: AGCCACAGTGGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACACAGCTGTGCTCATCACACGCTATGACATCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp GTTGGGTACACGAAGTCCTGTCTAGGAGGCCGGTTATTCAAGCAAAGCCCCAGGGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: VGYTKSCLGGRLFKQSPRGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...CCTGGGGCTTTGCTTGAATAACCGGCCTCCTAGACAGGACTTCGTGTACCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CACCACCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTGGGCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: HHPLSIVCVWHSVPSAAGRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...CCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp ACCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: TQSGGHGSVLQARCLLGNRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...ATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGACCACACTGTCACACTaGGCCTCACACTGCTGCATG +
Preference number: 5 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWTTLSH*ASHCCM
Trigger: CATGCAGCAGTGTGAGGCCAAGTGTGACAGTGTGGT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp CTCAGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTTGCTCAGACACCAGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: LSSWDAIGDAPIALAQTPGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...TGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp TTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGCGAGGGTGTAACAGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: FPVYCSGPWLQIRGEGVTGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...TGTTACACCCTCGCCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CAA 90 bp TTATTCTTCCCTTTTCCCAGTTTATTGTTCTGGCCCCTGGTTGCAGATCAGGGGGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: LFFPFPSLLFWPLVADQGERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...CCCCTGATCTGCAACCAGGGGCCAGAACAATAAACTGGGAAAAGGGAAGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS-3UTR CAA 90 bp AGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RFRSWMKMWTEPLGIQTTRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...CGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp AGCAGCTGGGATGCTATTGGTGATGCACCGATTGCTCTTGCTCAGACACCACAGCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: SSWDAIGDAPIALAQTPQRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...CTGTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAATAGCATCCCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp AGTAGATCGTTGATCTGCACTCTTACAAAGGACCACTCGGTGGCGGAGACCAGGCAGCTGTGTCATGGTTaGCCACACCATTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SRSLICTLTKDHSVAETRQLCHG*PHHSLG
Trigger: TCCCAGAGAATGGTGTGGCAAACCATGACACAGCTG...CCTGGTCTCCGCCACCGAGTGGTCCTTTGTAAGAGTGCAGATCAACGATCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp TCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCCAGTTGGTGATGCACCGATaGCTCTTGCTCAGACACCAC +
Preference number: 5 (lower is better)
Translates to: SLFTINWARYSRGSLGSQLVMHR*LLLRHH
Trigger: GTGGTGTCTGAGCAAGAGCAATCGGTGCATCACCAA...CTGGCTACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTAGCAGCTGGGATGCTATaGGTGATGCACCGATTGCTC +
Preference number: 5 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVAAGML*VMHRLL
Trigger: GAGCAATCGGTGCATCACCAATAGCATCCCAGCTGC...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp AGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGGTATCACAGCCTACATGCTaGCACTCGCCGCTGACACAA +
Preference number: 5 (lower is better)
Translates to: SPLSSLSTGQDTAEGPWVSQPTC*HSPLTQ
Trigger: TTGTGTCAGCGGCGAGTGCAAGCATGTAGGCTGTGA...TACCCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp ATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCAGCTGGGATGCTATTGGTGATGCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: IVCVWHSVPSAAGMLLVMRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...CATCACCAATAGCATCCCAGCTGCTGAGGGAACACTGTGCCAAACACACACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp ATGAAAATGTGGACCGAGCCTTTGGGGATCCAGACGACGTCCTCATACCCAGTTCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: MKMWTEPLGIQTTSSYPVRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...AACTGGGTATGAGGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACATTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp ATATTCCGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAATGTGGACCGAGCCTTaGGGGATCCAGACGACGTCC +
Preference number: 5 (lower is better)
Translates to: IFRSKGGRGARDLNMCATMWTEP*GIQTTS
Trigger: GGACGTCGTCTGGATCCCCAAAGGCTCGGTCCACAT...TGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp TTTGTAGCACCACCCTTTGTCGATAGTGTGTGTTTGGCACAGTGTTCCCTCAGCCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: FVAPPFVDSVCLAQCSLSRVTRM*TMFPRL
Trigger: GAGTCTGGGAAACATCGTCAACATCCTGGTCACTCG...GCTGAGGGAACACTGTGCCAAACACACACTATCGACAAAGGGTGGTGCTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWRPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp AGGAGTCCTCTCTCTTCACTATCAACTGGGCAAGATACAGCAGAGGGTCCCTGGACCTTGTTCACATCCTaGCATTCTTCTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: RSPLSSLSTGQDTAEGPWTLFTS*HSSGPS
Trigger: AGATGGCCCAGAAGAATGCAAGGATGTGAACAAGGT...CCAGGGACCCTCTGCTGTATCTTGCCCAGTTGATAGTGAAGAGAGAGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: YTRQNFINVRLLGEECVGERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp CCCAATCTGGTGGACATGGTTCTGTGTTGCAGGCACGCTGCCTCTTGGGCAATTGAGTCCTGGAAAAGTTaGGCAACAATGTTCATGATG +
Preference number: 5 (lower is better)
Translates to: PNLVDMVLCCRHAASWAIESWKS*ATMFMM
Trigger: CATCATGAACATTGTTGCCAAACTTTTCCAGGACTC...AATTGCCCAAGAGGCAGCGTGCCTGCAACACAGAACCATGTCCACCAGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp AGGGACAGGTTCAGATCTTGGATGAAAATGTGGACCGAGCCTTTGGGGATCCAGAGGCCGATATCTTCATaGATACTGCAGCTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: RDRFRSWMKMWTEPLGIQRPISS*ILQLLS
Trigger: TGAGAGGAGCTGCAGTATCAATGAAGATATCGGCCT...CTGGATCCCCAAAGGCTCGGTCCACATTTTCATCCAAGATCTGAACCTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174348.8
CDS-3UTR CAA 90 bp CGATCAAAGGGTGGGAGGGGTGCTAGGGACTTAAATATGTGTGCAACAAGGAGTATGCACCGATTGCTCTaGCTCAGACACCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: RSKGGRGARDLNMCATRSMHRLL*LRHHSS
Trigger: TGAACTGTGGTGTCTGAGCAAGAGCAATCGGTGCAT...ACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCCACCCTTTGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000087623.13
CDS-3UTR CAA 90 bp ATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATCACTGTGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: ILYDPCLQVNEALEFNHCERRPA*PRCGPL
Trigger: GAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTC...ACAGTGATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CAA 90 bp TACACAAGACAGAACTTTATTAATGTAAGGCTTCTTGGTGAGGAGTGTGTGGGCCGCAGAGAGGAACGCTaGTATACTACATGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: YTRQNFINVRLLGEECVGRREER*YTTWGP
Trigger: TGGCCCCCATGTAGTATACAAGCGTTCCTCTCTGCG...GCCCACACACTCCTCACCAAGAAGCCTTACATTAATAAAGTTCTGTCTTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000087623.13
ENSMUST00000173030.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS-3UTR CAA 90 bp ATCTGTATTCTTTATGACCCTTGCCTGCAGGTGAATGAAGCTCTTGAATTCAATGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGT +
Preference number: 5 (lower is better)
Translates to: ICILYDPCLQVNEALEFNGQELI*RSEGMR
Trigger: ACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCC...ATTGAATTCAAGAGCTTCATTCACCTGCAGGCAAGGGTCATAAAGAATACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234715.2
CDS-3UTR CAA 90 bp GCTAGGGACTTAAATATGTGTGCAACAAGGAGTCCTCTCTCTTCACTATCAACTGAGTCCTGGAAAAGTTaGGCAACAATGTTCATGATG +
Preference number: 5 (lower is better)
Translates to: ARDLNMCATRSPLSSLSTESWKS*ATMFMM
Trigger: CATCATGAACATTGTTGCCAAACTTTTCCAGGACTC...AGTTGATAGTGAAGAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS GCA 72 bp GTGCTGACGGCCACATGGGAGCTACCAGCCTGGCCCTaGAGGTGGCCAGCGTATAGGCAGTGGGCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: VLTATWELPAWP*RWPAYRQWARA
Trigger: TGCCCGGGCCCACTGCCTATACGCTGGCCACCTGCAGGGCCAGGCTGGTAGCTCCCATGTGGCCGTCAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS GCA 72 bp GCCAGGCCTTCCCGTGTCCAGTATTCCACCGAGACGTaGCCTGCCAGGAGACGGGGGCTGCGGGTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ARPSRVQYSTET*PARRRGLRVRF
Trigger: GAACCTGACCCGCAGCCCCCGTCTCCTGGCAGGGCACGTCTCGGTGGAATACTGGACACGGGAAGGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS TCA 72 bp CTGCCACAATCAGGCCATGCAGGCCCCCACAGGTGCTaGCGGCCACATGGGAGCTACCAGCCTGGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: LPQSGHAGPHRC*RPHGSYQPGPA
Trigger: TGCAGGGCCAGGCTGGTAGCTCCCATGTGGCCGTCAGCACCTGTGGGGGCCTGCATGGCCTGATTGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS GCA 72 bp AGGCGGGACTCAGTTGTAGCCCCTGCACCCCGACGCTaGCTCCGGAAGGCAGGTGGAGAGAAGGCCAGCATT +
Preference number: 6 (lower is better)
Translates to: RRDSVVAPAPRR*LRKAGGEKASI
Trigger: AATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGGCAGCGTCGGGGTGCAGGGGCTACAACTGAGTCCCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS CCA 72 bp GGGGGCTGCGGGTCAGGTTCAGCAGGAAGTGAGTGCTaGGTGCGGCCACCTTGTAGAATAGGCGGGACTCAG +
Preference number: 6 (lower is better)
Translates to: GGCGSGSAGSEC*VRPPCRIGGTQ
Trigger: CTGAGTCCCGCCTATTCTACAAGGTGGCCGCACCCAGCACTCACTTCCTGCTGAACCTGACCCGCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234715.2
CDS CAA 90 bp CACCCCGACGCTGCCTCCGGAAGGCAGGTGGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTCGAGTTGGGAAGGCAATCTCATAGC +
Preference number: 6 (lower is better)
Translates to: HPDAASGRQVERRPA*PRCGPLELGRQSHS
Trigger: GCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGGCAGCGTCGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS CCA 72 bp CCAGCTGGCCTCGCTCAGATTCATTCCCCAGGGGCCTaGCAGGTGGTGGCTTCAGGGTACGTAACCACCATG +
Preference number: 6 (lower is better)
Translates to: PAGLAQIHSPGA*QVVASGYVTTM
Trigger: CATGGTGGTTACGTACCCTGAAGCCACCACCTGCCAGGCCCCTGGGGAATGAATCTGAGCGAGGCCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
CDS CAA 72 bp GCTGCCTCCGGAAGGCAGGTGGAGAGAAGGCCAGCATaGCCCCGTTGTGGTCCACTCGAGTTGGGAAGGCAA +
Preference number: 6 (lower is better)
Translates to: AASGRQVERRPA*PRCGPLELGRQ
Trigger: TTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS GCA 72 bp CTGCCTCCGGAAGGCAGGTGGAGAGAAGGCCAGCATTaGCCCGTTGTGGTCCACTCGAGTTGGGAAGGCAAT +
Preference number: 6 (lower is better)
Translates to: LPPEGRWREGQH*PVVVHSSWEGN
Trigger: ATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCTGCCTTCCGGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS TCA 72 bp TGCCCACGGGCCCCACAGCCGTTTCCCACGCCATCGTaGTTCATGCCAAATAGAAGCTGTCCAGTGACTTCC +
Preference number: 6 (lower is better)
Translates to: CPRAPQPFPTPS*FMPNRSCPVTS
Trigger: GGAAGTCACTGGACAGCTTCTATTTGGCATGAATCACGATGGCGTGGGAAACGGCTGTGGGGCCCGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172922.8
CDS CCA 72 bp GAGCACAGCTGTGTCATGGTTTGCCACACCATTCTCTaGGATGGCGTTGCCATGGCCACTGTGGCTCACGAT +
Preference number: 6 (lower is better)
Translates to: EHSCVMVCHTIL*DGVAMATVAHD
Trigger: ATCGTGAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACACAGCTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS CAA 90 bp CAGGTGGAGAGAAGGCCAGCATTGCCCCGTTGTGGTCCACTCGAGTaGGGAAGGCAATCTCATAGCTCTCCAAACTGGACAGGAGCTCAT +
Preference number: 6 (lower is better)
Translates to: QVERRPALPRCGPLE*GRQSHSSPNWTGAH
Trigger: ATGAGCTCCTGTCCAGTTTGGAGAGCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCTCTCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS TCA 72 bp TCATCTCTCACTCCACAGGCTGTGTCCAGATGGGGGTaGCGCAGAGAGGAACGCTTGTATACTACATGGGGG +
Preference number: 6 (lower is better)
Translates to: SSLTPQAVSRWG*RREERLYTTWG
Trigger: CCCCCATGTAGTATACAAGCGTTCCTCTCTGCGTCACCCCCATCTGGACACAGCCTGTGGAGTGAGAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
CDS GCA 72 bp TGTCATGGTTTGCCACACCATTCTCTGGGATGGCGTTaGCATGGCCACTGTGGCTCACGATGGATTTCTGCC +
Preference number: 6 (lower is better)
Translates to: CHGLPHHSLGWR*HGHCGSRWISA
Trigger: GGCAGAAATCCATCGTGAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS CCA 72 bp GAAGGCCAGCATTGCCCCGTTGTGGTCCACTCGAGTTaGGAAGGCAATCTCATAGCTCTCCAAACTGGACAG +
Preference number: 6 (lower is better)
Translates to: EGQHCPVVVHSS*EGNLIALQTGQ
Trigger: CTGTCCAGTTTGGAGAGCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS CAA 72 bp GTGTCATGGTTTGCCACACCATTCTCTGGGATGGCGTaGCCATGGCCACTGTGGCTCACGATGGATTTCTGC +
Preference number: 6 (lower is better)
Translates to: VSWFATPFSGMA*PWPLWLTMDFC
Trigger: GCAGAAATCCATCGTGAGCCACAGTGGCCATGGCAACGCCATCCCAGAGAATGGTGTGGCAAACCATGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS TCA 72 bp CCAGGCCTAGGAAGGGGAAGGCACTTACAATGTTCATaGTGGCCAACACATACTGCTCCACATCTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PGLGRGRHLQCS*WPTHTAPHLSA
Trigger: GGCGGAGAGATGTGGAGCAGTATGTGTTGGCCATCATGAACATTGTAAGTGCCTTCCCCTTCCTAGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234497.2
CDS GCA 72 bp ACCTTGCAGGGGTTCAATCAGATACTCTTCATCATCTaGCACAATCAGGCCATGCAGGCCCCCACAGGTGCT +
Preference number: 6 (lower is better)
Translates to: TLQGFNQILFII*HNQAMQAPTGA
Trigger: AGCACCTGTGGGGGCCTGCATGGCCTGATTGTGGCAGATGATGAAGAGTATCTGATTGAACCCCTGCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
CDS CAA 72 bp AGAAGGCCAGCATTGCCCCGTTGTGGTCCACTCGAGTaGGGAAGGCAATCTCATAGCTCTCCAAACTGGACA +
Preference number: 6 (lower is better)
Translates to: RRPALPRCGPLE*GRQSHSSPNWT
Trigger: TGTCCAGTTTGGAGAGCTATGAGATTGCCTTCCCAACTCGAGTGGACCACAACGGGGCAATGCTGGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2
CDS CAA 72 bp TCCTCTGTGAGCAGGATGAGGCGAGTGACCAGGATGTaGACGATGTTTCCCAGACTCGAGTCCTGGAAAAGT +
Preference number: 6 (lower is better)
Translates to: SSVSRMRRVTRM*TMFPRLESWKS
Trigger: ACTTTTCCAGGACTCGAGTCTGGGAAACATCGTCAACATCCTGGTCACTCGCCTCATCCTGCTCACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000174348.8
CDS CCA 72 bp ACCAGGATGTTGACGATGTTTCCCAGACTCGAGTCCTaGAAAAGTTTGGCAACAATGTTCATGATGGCCAAC +
Preference number: 6 (lower is better)
Translates to: TRMLTMFPRLES*KSLATMFMMAN
Trigger: GTTGGCCATCATGAACATTGTTGCCAAACTTTTCCAGGACTCGAGTCTGGGAAACATCGTCAACATCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000087623.13
ENSMUST00000174348.8
CDS CAA 72 bp AATCTCATAGCTCTCCAAACTGGACAGGAGCTCATCTaGAGATCTGAAGGCATGCGTGACCTTGAATGTGAG +
Preference number: 6 (lower is better)
Translates to: NLIALQTGQELI*RSEGMRDLECE
Trigger: CTCACATTCAAGGTCACGCATGCCTTCAGATCTCAAGATGAGCTCCTGTCCAGTTTGGAGAGCTATGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000087623.13
ENSMUST00000172922.8
ENSMUST00000173013.8
ENSMUST00000173030.8
ENSMUST00000173241.8
ENSMUST00000173931.8
ENSMUST00000234497.2
ENSMUST00000234715.2