Pregenerated sensors for ADAMDEC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022057Ensembl transcript IDs: ENSMUST00000022641.9
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCTGGGGCTCTGTTCTTTCTGCCAGCTCCCTCCCTCAGCAGGTaGCAGGCTTTGATTCCTACGCCTCAGGAACAAAGAGATTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: GAGALFFLPAPSLSR*QALIPTPQEQRDLG Trigger: CCCTAAATCTCTTTGTTCCTGAGGCGTAGGAATCAAAGCCTGCCACCTGCTGAGGGAGGGAGCTGGCAGAAAGAACAGAGCCCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGGATAGGCGGGCTTCCTaGCAGAGGCAGGGTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGDRRAS*QRQGLD Trigger: GTCCAGACCCTGCCTCTGCCAGGAAGCCCGCCTATC...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR CAA 90 bp | GCTCTGTTCTTTCTGCCAGCTCCCTCCCTCAGCAGGTGGCAGGCTTaGATTCCTACGCCTCAGGAACAAAGAGATTTAGGGTTAAATTAC | + |
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Preference number: 2 (lower is better) Translates to: ALFFLPAPSLSRWQA*IPTPQEQRDLGLNY Trigger: GTAATTTAACCCTAAATCTCTTTGTTCCTGAGGCGTAGGAATCAAAGCCTGCCACCTGCTGAGGGAGGGAGCTGGCAGAAAGAACAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGGACCTGGAGTATGTTTaGATACAACTACTAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGDLEYV*IQLLKF Trigger: GAATTTTAGTAGTTGTATGCAAACATACTCCAGGTC...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGGTTCACAGAGAACATaGCACACAGAGATAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHGSQRT*HTEIGL Trigger: CAAACCTATCTCTGTGTGCCATGTTCTCTGTGAACC...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGTACAAGTCGTATTTTaGGGCATTCTTCTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHVQVVF*GILLLQ Trigger: CTGAAGAAGAAGAATGCCCCAAAATACGACTTGTAC...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCGGCTCCATGATTACACAGATTCCCAAATCTCAGGACTAACAGTCTTTCTAGTACTGAGGAGAAAATaGCTACATATTCATGACAGG | + |
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Preference number: 2 (lower is better) Translates to: IRLHDYTDSQISGLTVFLVLRRK*LHIHDR Trigger: CCTGTCATGAATATGTAGGCATTTTCTCCTCAGTAC...TAGAAAGACTGTTAGTCCTGAGATTTGGGAATCTGTGTAATCATGGAGCCGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTATTCTTCTTCTTCAGTaGTTGAAGTCATGGGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSILLLQ*LKSWVH Trigger: GTGAACCCATGACTTCAATCACTGAAGAAGAAGAAT...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAACCAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGATACGTTGAGAAGTTCTaGAAAGGTTCATCTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: CNQYSHEPENPGSLQDVRYVEKF*KGSSIL Trigger: CAAAATAGATGAACCTTTGCAGAACTTCTCAACGTA...TCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTGGTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR CAA 90 bp | ATACATGATGGTGTGAGAAACTCTATTTGCTCAAATGAAAAGTGTTaGAATGTAACCAATATTCCCACGAGCCAGAAAATCCGGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: IHDGVRNSICSNEKC*NVTNIPTSQKIREV Trigger: AACTTCCCGGATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCAAATAGAGTTTCTCACACCATCATGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTATGCCTACATATTCATaGCAGGTACAAGTCGTATTT | + |
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Preference number: 2 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSMPTYS*QVQVVF Trigger: AAATACGACTTGTACCTGTCATGAATATGTAGGCAT...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAAATGAAAAGTGTTTGAATGTAACCAATATTCCCACGAGCCAGAAAATCACTATAGATAAGACCTaGATGAACAGACAGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: CSNEKCLNVTNIPTSQKITIDKT*MNRQHH Trigger: GTGATGCTGTCTGTTCATTCAGGTCTTATCTATAGT...GATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR TCA 72 bp | AAGTCGTATTTTGGGGCATTCTTCTTCTTCAGTGATTaGAGTCATGGGTTCACAGAGAACATGGCACACAGA | + |
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Preference number: 3 (lower is better) Translates to: KSYFGAFFFFSD*SHGFTENMAHR Trigger: TCTGTGTGCCATGTTCTCTGTGAACCCATGACTTCAATCACTGAAGAAGAAGAATGCCCCAAAATACGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAACCAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGAATTCTGTGGAGTACGTaGAGAAGTTCTGCAAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: CNQYSHEPENPGSLQDVRILWST*RSSAKV Trigger: AACCTTTGCAGAACTTCTCAACGTACTCCACAGAAT...TCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTGGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR TCA 72 bp | TTTCAGGCTCCTCACACTCACACTATAGATAAGACCTaGATGAACAGACAGCATCACCTTAGCATGTCTATT | + |
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Preference number: 3 (lower is better) Translates to: FQAPHTHTIDKT*MNRQHHLSMSI Trigger: AATAGACATGCTAAGGTGATGCTGTCTGTTCATTCAGGTCTTATCTATAGTGTGAGTGTGAGGAGCCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTCAAATGAAAAGTGTTTGAATGTAACCAATATTCCCACGAGCCAGAAAATCGGTACAAGTCGTATTTaGGGGCATTCTTCTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: CSNEKCLNVTNIPTSQKIGTSRI*GHSSSS Trigger: TGAAGAAGAAGAATGCCCCAAAATACGACTTGTACC...GATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| 3UTR TCA 72 bp | AGTTTGGGATTAACTCAACAATTCTGTGGAGTACGTTaGGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: SLGLTQQFCGVR*EVLQRFIYFVL Trigger: GAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCACAGAATTGTTGAGTTAATCCCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGGCAGGACCCAAGACATaGTGGCTTCTGTGGGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLAGPKT*WLLWVA Trigger: GGCTACCCACAGAAGCCAGCATGTCTTGGGTCCTGC...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGCCTGAGAGTGTCTGGTaGTCTCTTCTCCTCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLPESVW*SLLLWV Trigger: CACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGG...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | CAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTACCCATCACAGGTACTaGTCCTGGCCAGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QYSHEPENPGSLQDVRQTTHHRY*SWPESP Trigger: GGGGCTCTCTGGCCAGGATCAGTACCTGTGATGGGT...AGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGGCTCTCCCTCATCTGTaGTTTGTAGAGGCTTTATTT | + |
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Preference number: 4 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGALPHL*FVEALF Trigger: AAATAAAGCCTCTACAAAGCACAGATGAGGGAGAGC...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGTTCATACCAAGGGCGTaGCCCAACTCATGTGACATC | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLFIPRA*PNSCDI Trigger: GATGTCACATGAGTTGGGCCACGCCCTTGGTATGAA...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGTATGGGAGAACAGCATaGTCTCCCTCATCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLYGRTA*SPSSVL Trigger: AAGCACAGATGAGGGAGAGCATGCTGTTCTCCCATA...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATTACACAGATTCCCAAACAGGGTTTCACATCCTaGGAGTGTCTGGTGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IFLHCSPGFGSMITQIPKQGFTS*ECLVLS Trigger: AGAGAGCACCAGACACTCTCAGGATGTGAAACCCTG...TTTGGGAATCTGTGTAATCATGGAGCCGAATCCTGGTGAACAATGAAGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGGCAGATTCAGCACCTTaGACAGAAAGGTTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLADSAP*TERFSS Trigger: AGATGAGAACCTTTCTGTTCAAGGTGCTGAATCTGC...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGTTTGAACTCAGGTACTaGTTCATCACACAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLFELRY*FITQLP Trigger: TGGCAGCTGTGTGATGAATCAGTACCTGAGTTCAAA...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATTCCCTTCCAGCTGTATaGGAGAACAGCATGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHSLPAV*ENSMLS Trigger: GGAGAGCATGCTGTTCTCCCATACAGCTGGAAGGGA...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATTACACAGATTCCCAAACTGAGAAGCTGGGCGTaGTTATGGATCCTTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: IFLHCSPGFGSMITQIPKLRSWA*LWILFP Trigger: GGGGAAAAGGATCCATAACCACGCCCAGCTTCTCAG...TTTGGGAATCTGTGTAATCATGGAGCCGAATCCTGGTGAACAATGAAGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATAAGCCACAGGACTaGAAGCAGGACCCAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHDKPQD*KQDPRH Trigger: ATGTCTTGGGTCCTGCTTTCAGTCCTGTGGCTTATC...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGATTTGGGTTTTTGAGTaGCCTGGAAGTTCGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLIWVFE*PGSSKM Trigger: CATCTTCGAACTTCCAGGTCACTCAAAAACCCAAAT...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGATATTGAACTTCTGGTaGATATTTTTCCTCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGILNFW*IFFLFA Trigger: GGCAAAGAGGAAAAATATGCACCAGAAGTTCAATAT...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGGCCCCAGAAGATGCTTaGTTCTCTTTAGGTGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLAPEDA*FSLGEK Trigger: TTTTTCACCTAAAGAGAACCAAGCATCTTCTGGGGC...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGACACTTGGTATAATATaGAACATCCTTCATACCAAG | + |
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Preference number: 4 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGTLGII*NILHTK Trigger: CTTGGTATGAAGGATGTTCCATATTATACCAAGTGT...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | TTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTGGCTGATCCTTGGGGAATTTTaGACTCAGGTACTGATTCAT | + |
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Preference number: 4 (lower is better) Translates to: FPRARKSGKFTGCKTNWLILGEF*TQVLIH Trigger: ATGAATCAGTACCTGAGTTCAAAATTCCCCAAGGAT...CAGCCAGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATTACACAGATTCCCAAATCACTGCAGTCAGGTTaGGATTTCAGCCTACATGTC | + |
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Preference number: 4 (lower is better) Translates to: IFLHCSPGFGSMITQIPKSLQSG*DFSLHV Trigger: GACATGTAGGCTGAAATCTCAACCTGACTGCAGTGA...TTTGGGAATCTGTGTAATCATGGAGCCGAATCCTGGTGAACAATGAAGGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TGTAACCAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGAGATTCATCACACAGCTaGCAGAGGGACACTTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: CNQYSHEPENPGSLQDVRDSSHS*QRDTWY Trigger: ATACCAAGTGTCCCTCTGGCAGCTGTGTGATGAATC...TCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTGGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTCATCCTGAGAGTGTCTaGTGCTCTCTTCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSHPESV*CSLLLW Trigger: CCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATG...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | ATTCGGCTCCATGATTACACAGATTCCCAAATCTCAGGACTAACAGTCTTTCTAAGCTGGGCGTGGTTATaGATCCTTTTCCCCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: IRLHDYTDSQISGLTVFLSWAWL*ILFPRL Trigger: TAACCTGGGGAAAAGGATCCATAACCACGCCCAGCT...TAGAAAGACTGTTAGTCCTGAGATTTGGGAATCTGTGTAATCATGGAGCCGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATTACACAGATTCCCAAAGCTCACAGCAAAGATTaGTACATTCCTCAGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: IFLHCSPGFGSMITQIPKAHSKD*YIPQES Trigger: GCTCTCCTGAGGAATGTACCAATCTTTGCTGTGAGC...TTTGGGAATCTGTGTAATCATGGAGCCGAATCCTGGTGAACAATGAAGGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATCTCTTCTCCTCTGGGTaGGTAAGATGTTTCAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHLFSSG*VRCFSV Trigger: TACACTGAAACATCTTACTCACCCAGAGGAGAAGAG...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | ATTCGGCTCCATGATTACACAGATTCCCAAATCTCAGGACTAACAGTCTTTCTATGTTTCAGTGTAGTCTaGCCCCAGAAGATGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: IRLHDYTDSQISGLTVFLCFSVV*PQKMLG Trigger: ACCAAGCATCTTCTGGGGCCAGACTACACTGAAACA...TAGAAAGACTGTTAGTCCTGAGATTTGGGAATCTGTGTAATCATGGAGCCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATACCTTTATCTTGTCCTaGTCAGACCAGATCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHTFILS*SDQISM Trigger: CATGGAGATCTGGTCTGACCAGGACAAGATAAAGGT...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR CCA 90 bp | ATTCGGCTCCATGATTACACAGATTCCCAAATCTCAGGACTAACAGTCTTTCTACCATATCTCTCTGTCTaGTTGTTCTCAAGCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IRLHDYTDSQISGLTVFLPYLSV*LFSSPL Trigger: AAGAGGGCTTGAGAACAACCAGACAGAGAGATATGG...TAGAAAGACTGTTAGTCCTGAGATTTGGGAATCTGTGTAATCATGGAGCCGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATGATTACACAGATTCCCAAATCTATCACTTGGATTTaGATGATAAGCCACAGGACT | + |
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Preference number: 4 (lower is better) Translates to: IFLHCSPGFGSMITQIPKSITWI*MISHRT Trigger: AGTCCTGTGGCTTATCATTCAAATCCAAGTGATAGA...TTTGGGAATCTGTGTAATCATGGAGCCGAATCCTGGTGAACAATGAAGGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR TCA 90 bp | TGCTCAAATGAAAAGTGTTTGAATGTAACCAATATTCCCACGAGCCAGAAAATCGATGGCTTCGTTTCCTaGCAACTTGCTTCTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: CSNEKCLNVTNIPTSQKIDGFVS*QLASQH Trigger: ATGCTGAGAAGCAAGTTGTCAGGAAACGAAGCCATC...GATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTCGTTTCCTGACAACTTaGTTCTCAGCATCCTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSRFLTT*FSASLS Trigger: TGACAAGGATGCTGAGAAGCAAGTTGTCAGGAAACG...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
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| CDS-3UTR GCA 90 bp | TGCTCAAATGAAAAGTGTTTGAATGTAACCAATATTCCCACGAGCCAGAAAATCCAGACCAGATCTCCATaGCCACCAAAGACACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSNEKCLNVTNIPTSQKIQTRSP*PPKTLE Trigger: TTCAAGTGTCTTTGGTGGGCATGGAGATCTGGTCTG...GATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTCTTCATTTGGGTTTTTaGGTGACCTGGAAGTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSLHLGF*VTWKFE Trigger: TTCGAACTTCCAGGTCACTCAAAAACCCAAATGAAG...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR TCA 90 bp | ATTCGGCTCCATGATTACACAGATTCCCAAATCTCAGGACTAACAGTCTTTCTAAGAAAGGTTCTCATCTaGGTCACATTCCCATTATAC | + |
|
Preference number: 4 (lower is better) Translates to: IRLHDYTDSQISGLTVFLRKVLI*VTFPLY Trigger: GTATAATGGGAATGTGACTCAGATGAGAACCTTTCT...TAGAAAGACTGTTAGTCCTGAGATTTGGGAATCTGTGTAATCATGGAGCCGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAATTACTAGTCACTTTGCAGTTTGGGATTAACTCAACAATTCTGTGGAGTTGTGATGTGGTTGGATaGTTCACTGCAGTCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKLLVTLQFGINSTILWSCDVVG*FTAVRL Trigger: CAACCTGACTGCAGTGAAGCATCCAACCACATCACA...ACTCCACAGAATTGTTGAGTTAATCCCAAACTGCAAAGTGACTAGTAATTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CCA 90 bp | GTTAAATTACTAGTCACTTTGCAGTTTGGGATTAACTCAACAATTCTGTGGAGTTGCTCTCTTCTCCTCTaGGTGAGTAAGATGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKLLVTLQFGINSTILWSCSLLL*VSKMFQ Trigger: CTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCA...ACTCCACAGAATTGTTGAGTTAATCCCAAACTGCAAAGTGACTAGTAATTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CCA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTTGCCAGAGGGACACTTaGTATAATATGGAACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRSSAKVHLFCPPKSETCQRDT*YNMEHP Trigger: AGGATGTTCCATATTATACCAAGTGTCCCTCTGGCA...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| 3UTR CAA 72 bp | CAGTTTGGGATTAACTCAACAATTCTGTGGAGTACGTaGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QFGINSTILWST*RSSAKVHLFCP Trigger: AGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCACAGAATTGTTGAGTTAATCCCAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR TCA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTATGTACTTCTGTCCTTaGAGTAAGTCTTCATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRSSAKVHLFCPPKSETMYFCP*SKSSFG Trigger: CCCAAATGAAGACTTACTTCAAGGACAGAAGTACAT...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR TCA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTCCTTGCATTTCTAGATaGGAGAAACCCTTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TLRSSAKVHLFCPPKSETPCISR*EKPLKM Trigger: CATTTTCAAGGGTTTCTCTCATCTAGAAATGCAAGG...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| 3UTR CAA 72 bp | GGTGTGAGAAACTCTATTTGCTCAAATGAAAAGTGTTaGAATGTAACCAATATTCCCACGAGCCAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GVRNSICSNEKC*NVTNIPTSQKI Trigger: GATTTTCTGGCTCGTGGGAATATTGGTTACATTCAAACACTTTTCATTTGAGCAAATAGAGTTTCTCACACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 90 bp | GATGTAGTACAAAAGGAATTCCCAGCTGCCATTCCCACACGTCCATaGCGGAAGCTAGCTCCACTGAGAAGCTGGGCGTGGTTATGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DVVQKEFPAAIPTRP*RKLAPLRSWAWLWI Trigger: GATCCATAACCACGCCCAGCTTCTCAGTGGAGCTAGCTTCCGCCATGGACGTGTGGGAATGGCAGCTGGGAATTCCTTTTGTACTACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGGGCTCCACCTTTATCTaGTCCTGGTCAGACCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGGSTFI*SWSDQI Trigger: GATCTGGTCTGACCAGGACAAGATAAAGGTGGAGCC...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 90 bp | GGGTTTCACATCCTGAGAGTGTCTGGTGCTCTCTTCTCCTCTGGGTaGGTAAGATGTTTCAGTGTAGTCTGGCCCCAGAAGATGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GFHILRVSGALFSSG*VRCFSVVWPQKMLG Trigger: ACCAAGCATCTTCTGGGGCCAGACTACACTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATGTGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 90 bp | AGCAGGGTTTCACATCCTGAGAGTGTCTGGTGCTCTCTTCTCCTCTaGGTGAGTAAGATGTTTCAGTGTAGTCTGGCCCCAGAAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRVSHPESVWCSLLL*VSKMFQCSLAPEDA Trigger: AGCATCTTCTGGGGCCAGACTACACTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATGTGAAACCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 90 bp | CTCAATTACAGACACAGACGATGTAGTACAAAAGGAATTCCCAGCTaGCATTCCCACACGTCCATGGCGGAAGCTAGCTCCACTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNYRHRRCSTKGIPS*HSHTSMAEASSTEK Trigger: CTTCTCAGTGGAGCTAGCTTCCGCCATGGACGTGTGGGAATGGCAGCTGGGAATTCCTTTTGTACTACATCGTCTGTGTCTGTAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 90 bp | TGTGGCCTTCATAGTAGCAGGGTTTCACATCCTGAGAGTGTCTGGTaGTCTCTTCTCCTCTGGGTGAGTAAGATGTTTCAGTGTAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGLHSSRVSHPESVW*SLLLWVSKMFQCSL Trigger: CAGACTACACTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATGTGAAACCCTGCTACTATGAAGGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 90 bp | GGATGTGGCCTTCATAGTAGCAGGGTTTCACATCCTGAGAGTGTCTaGTGCTCTCTTCTCCTCTGGGTGAGTAAGATGTTTCAGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GCGLHSSRVSHPESV*CSLLLWVSKMFQCS Trigger: ACTACACTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATGTGAAACCCTGCTACTATGAAGGCCACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGGCATATTTTTCCTCTTaGCCATATCTCTCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGAYFSS*PYLSVW Trigger: CCAGACAGAGAGATATGGCAAAGAGGAAAAATATGC...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 90 bp | TTGAACTCAGGTACTGATTCATCACACAGCTGCCAGAGGGACACTTaGTATAATATGGAACATCCTTCATACCAAGGGCGTGGCCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LNSGTDSSHSCQRDT*YNMEHPSYQGRGPT Trigger: AGTTGGGCCACGCCCTTGGTATGAAGGATGTTCCATATTATACCAAGTGTCCCTCTGGCAGCTGTGTGATGAATCAGTACCTGAGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTTACAGGATGTAAGACAAACTGGCTGCCCAGAGACAGGAAGGGGCTGGGGAATCCTTGGGGAATTTaGAACTCAGGTACTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KFTGCKTNWLPRDRKGLGNPWGI*NSGTDS Trigger: TGAATCAGTACCTGAGTTCAAAATTCCCCAAGGATT...CCCCAGCCCCTTCCTGTCTCTGGGCAGCCAGTTTGTCTTACATCCTGTAAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 90 bp | GTTTTTAGGGTCAGGTGCCAGCAGCAGACACCTTGCATTTCTAGATaGGAGAAACCCTTGAAAATGAGAACGGCTGACGGTACTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VFRVRCQQQTPCISR*EKPLKMRTADGTEI Trigger: GATTTCAGTACCGTCAGCCGTTCTCATTTTCAAGGGTTTCTCTCATCTAGAAATGCAAGGTGTCTGCTGCTGGCACCTGACCCTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | CAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTTCGTTTCCTGACAACTaGCTTCTCAGCATCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QYSHEPENPGSLQDVRQTSFPDN*LLSILV Trigger: GACAAGGATGCTGAGAAGCAAGTTGTCAGGAAACGA...AGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | CAATATTCCCACGAGCCAGAAAATCCGGGAAGTTTACAGGATGTAAGACAAACTCATTCTGTGATGTGGTaGGATGCTTCACTGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYSHEPENPGSLQDVRQTHSVMW*DASLQS Trigger: TGACTGCAGTGAAGCATCCAACCACATCACAGAATG...AGTTTGTCTTACATCCTGTAAACTTCCCGGATTTTCTGGCTCGTGGGAATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGAGAAAAGCAAAGATCTTCCTTCATTGTTCACCAGGATTCGGCTCCATTATCTCTCTGTCTGGTaGTTCTCAAGCCCTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKEKSKDLPSLFTRIRLHYLSVW*FSSPLF Trigger: GAAAAGAGGGCTTGAGAACAACCAGACAGAGAGATA...ATGGAGCCGAATCCTGGTGAACAATGAAGGAAGATCTTTGCTTTTCTCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGTACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGTCATGAACTGTGTCTaGTCCCTTCCAGCTGTATGG | + |
|
Preference number: 5 (lower is better) Translates to: WSTLRSSAKVHLFCPPKSVMNCV*SLPAVW Trigger: CCATACAGCTGGAAGGGACAAGACACAGTTCATGAC...ACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGTACTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 90 bp | AATCCTTGGGGAATTTTGAACTCAGGTACTGATTCATCACACAGCTaGCAGAGGGACACTTGGTATAATATGGAACATCCTTCATACCAA | + |
|
Preference number: 5 (lower is better) Translates to: NPWGILNSGTDSSHS*QRDTWYNMEHPSYQ Trigger: TTGGTATGAAGGATGTTCCATATTATACCAAGTGTCCCTCTGGCAGCTGTGTGATGAATCAGTACCTGAGTTCAAAATTCCCCAAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTGGCTCACAGCAAAGATaGGTACATTCCTCAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRSSAKVHLFCPPKSETGSQQR*VHSSGE Trigger: CTCTCCTGAGGAATGTACCAATCTTTGCTGTGAGCC...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTACTCGGGGGTTAACGTaGCATCTATCACTTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: TLRSSAKVHLFCPPKSETTRGLT*HLSLGF Trigger: AAATCCAAGTGATAGATGCAACGTTAACCCCCGAGT...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | ACGTTGAGAAGTTCTGCAAAGGTTCATCTATTTTGTCCTCCAAAAAGTGAAACTACGGTACTGAAATCCTaGGGGAATTTTGAACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TLRSSAKVHLFCPPKSETTVLKS*GNFELR Trigger: CCTGAGTTCAAAATTCCCCAAGGATTTCAGTACCGT...AGTTTCACTTTTTGGAGGACAAAATAGATGAACCTTTGCAGAACTTCTCAACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS-3UTR CAA 90 bp | GTTAAATTACTAGTCACTTTGCAGTTTGGGATTAACTCAACAATTCTGTGGAGTAGCAGATTCAGCACCTaGAACAGAAAGGTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VKLLVTLQFGINSTILWSSRFST*NRKVLI Trigger: GATGAGAACCTTTCTGTTCAAGGTGCTGAATCTGCT...ACTCCACAGAATTGTTGAGTTAATCCCAAACTGCAAAGTGACTAGTAATTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 72 bp | CAAAAGGAATTCCCAGCTGCCATTCCCACACGTCCATaGCGGAAGCTAGCTCCACTGAGAAGCTGGGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QKEFPAAIPTRP*RKLAPLRSWAW Trigger: CCACGCCCAGCTTCTCAGTGGAGCTAGCTTCCGCCATGGACGTGTGGGAATGGCAGCTGGGAATTCCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 72 bp | ACACGTCCATGGCGGAAGCTAGCTCCACTGAGAAGCTaGGCGTGGTTATGGATCCTTTTCCCCAGGTTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRPWRKLAPLRS*AWLWILFPRLE Trigger: TTCTAACCTGGGGAAAAGGATCCATAACCACGCCCAGCTTCTCAGTGGAGCTAGCTTCCGCCATGGACGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CAA 72 bp | GTGAACGTGGCACCAAGGTTGGGCTCCACCTTTATCTaGTCCTGGTCAGACCAGATCTCCATGCCCACCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNVAPRLGSTFI*SWSDQISMPTK Trigger: TTTGGTGGGCATGGAGATCTGGTCTGACCAGGACAAGATAAAGGTGGAGCCCAACCTTGGTGCCACGTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 72 bp | AGACACAGACGATGTAGTACAAAAGGAATTCCCAGCTaGCATTCCCACACGTCCATGGCGGAAGCTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RHRRCSTKGIPS*HSHTSMAEASS Trigger: GGAGCTAGCTTCCGCCATGGACGTGTGGGAATGGCAGCTGGGAATTCCTTTTGTACTACATCGTCTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CAA 72 bp | TGCCATCTCATGAAGTGTGTGAACGTGGCACCAAGGTaGGGCTCCACCTTTATCTTGTCCTGGTCAGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHLMKCVNVAPR*GSTFILSWSDQ Trigger: CTGGTCTGACCAGGACAAGATAAAGGTGGAGCCCAACCTTGGTGCCACGTTCACACACTTCATGAGATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CAA 90 bp | CAACCCATCACAGGTACTGATCCTGGCCAGAGAGCCCCTTGCATTTaGGATGTGGCCTTCATAGTAGCAGGGTTTCACATCCTGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPITGTDPGQRAPCI*DVAFIVAGFHILRV Trigger: CACTCTCAGGATGTGAAACCCTGCTACTATGAAGGCCACATCCAAAATGCAAGGGGCTCTCTGGCCAGGATCAGTACCTGTGATGGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 72 bp | TCACATCCTGAGAGTGTCTGGTGCTCTCTTCTCCTCTaGGTGAGTAAGATGTTTCAGTGTAGTCTGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHPESVWCSLLL*VSKMFQCSLAP Trigger: TGGGGCCAGACTACACTGAAACATCTTACTCACCCAGAGGAGAAGAGAGCACCAGACACTCTCAGGATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CCA 72 bp | CATCACACAGCTGCCAGAGGGACACTTGGTATAATATaGAACATCCTTCATACCAAGGGCGTGGCCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: HHTAARGTLGII*NILHTKGVAQL Trigger: GAGTTGGGCCACGCCCTTGGTATGAAGGATGTTCCATATTATACCAAGTGTCCCTCTGGCAGCTGTGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CAA 72 bp | ACAGGTACTGATCCTGGCCAGAGAGCCCCTTGCATTTaGGATGTGGCCTTCATAGTAGCAGGGTTTCACATC | + |
|
Preference number: 6 (lower is better) Translates to: TGTDPGQRAPCI*DVAFIVAGFHI Trigger: GATGTGAAACCCTGCTACTATGAAGGCCACATCCAAAATGCAAGGGGCTCTCTGGCCAGGATCAGTACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 72 bp | GTCAGGTGCCAGCAGCAGACACCTTGCATTTCTAGATaGGAGAAACCCTTGAAAATGAGAACGGCTGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: VRCQQQTPCISR*EKPLKMRTADG Trigger: ACCGTCAGCCGTTCTCATTTTCAAGGGTTTCTCTCATCTAGAAATGCAAGGTGTCTGCTGCTGGCACCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS CAA 72 bp | GATTTCAGCCTACATGTCAGGGGCTCACAGCAAAGATaGGTACATTCCTCAGGAGAGCCACAGTCACACTCT | + |
|
Preference number: 6 (lower is better) Translates to: DFSLHVRGSQQR*VHSSGEPQSHS Trigger: AGAGTGTGACTGTGGCTCTCCTGAGGAATGTACCAATCTTTGCTGTGAGCCCCTGACATGTAGGCTGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 72 bp | ATCTATCACTTGGATTTGAATGATAAGCCACAGGACTaGAAGCAGGACCCAAGACATGCTGGCTTCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IYHLDLNDKPQD*KQDPRHAGFCG Trigger: CCCACAGAAGCCAGCATGTCTTGGGTCCTGCTTTCAGTCCTGTGGCTTATCATTCAAATCCAAGTGATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 72 bp | AACATCCTTCATACCAAGGGCGTGGCCCAACTCATGTaGCATCAGTGCAACAAGAGCCACATTATTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NILHTKGVAQLM*HQCNKSHIILF Trigger: AAAAAGAATAATGTGGCTCTTGTTGCACTGATGTCACATGAGTTGGGCCACGCCCTTGGTATGAAGGATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 72 bp | AGCTGTATGGGAGAACAGCATGCTCTCCCTCATCTGTaGTTTGTAGAGGCTTTATTTGATATCTCTGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: SCMGEQHALPHL*FVEALFDISDH Trigger: GTGATCAGAGATATCAAATAAAGCCTCTACAAAGCACAGATGAGGGAGAGCATGCTGTTCTCCCATACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS GCA 72 bp | GGAATTTTGAACTCAGGTACTGATTCATCACACAGCTaGCAGAGGGACACTTGGTATAATATGGAACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GILNSGTDSSHS*QRDTWYNMEHP Trigger: AGGATGTTCCATATTATACCAAGTGTCCCTCTGGCAGCTGTGTGATGAATCAGTACCTGAGTTCAAAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||
| CDS TCA 72 bp | TCCAGCACCAAAAAGAGACCAATGTACTTCTGTCCTTaGAGTAAGTCTTCATTTGGGTTTTTGAGTGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTKKRPMYFCP*SKSSFGFLSDL Trigger: CAGGTCACTCAAAAACCCAAATGAAGACTTACTTCAAGGACAGAAGTACATTGGTCTCTTTTTGGTGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022641.9 |
||