Pregenerated sensors for ADAM7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022056Ensembl transcript IDs: ENSMUST00000022640.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGACATGGTCTCTCTCTGCAGTCCACAGAGACCCTGAACCTGTGTaGTCCTACTGCCTCAGCCTCCAGGAATCACAGGGCTGGTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: LTWSLSAVHRDPEPV*SYCLSLQESQGWSS Trigger: GGAGGACCAGCCCTGTGATTCCTGGAGGCTGAGGCAGTAGGATCACACAGGTTCAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR TCA 90 bp | GTGTCCAGTCTTGACATGGTCTCTCTCTGCAGTCCACAGAGACCCTaGACCTGTGTGATCCTACTGCCTCAGCCTCCAGGAATCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: VSSLDMVSLCSPQRP*TCVILLPQPPGITG Trigger: CCCTGTGATTCCTGGAGGCTGAGGCAGTAGGATCACACAGGTTCAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR GCA 90 bp | AAAGATCCCCTCAAAAGGCAACACAACCACAAGCCTGCAGTGATCTaGAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: KDPLKRQHNHKPAVI*SKDSEHQAHPDLCF Trigger: GAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTTGTGGTTGTGTTGCCTTTTGAGGGGATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CCA 90 bp | CTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGAGGTaGAGTGAACTTTATAAAATTCCTGTCACCTTCTTGGCTACTTAT | + |
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Preference number: 1 (lower is better) Translates to: LCFPRAQRPLMCTRR*SELYKIPVTFLATY Trigger: ATAAGTAGCCAAGAAGGTGACAGGAATTTTATAAAGTTCACTCCACCTCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR TCA 90 bp | ATTTTTATGCTTTTGCTAAAGAGTTCTCACCAAGGTGTCCAGTCTTaGCATGGTCTCTCTCTGCAGTCCACAGAGACCCTGAACCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: IFMLLLKSSHQGVQS*HGLSLQSTETLNLC Trigger: ACACAGGTTCAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACACCTTGGTGAGAACTCTTTAGCAAAAGCATAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGACAGGAATCACAGGGCTaGTCCTCCATACCTGACCTA | + |
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Preference number: 2 (lower is better) Translates to: HTLICVSRGLRDLSCAQGQESQG*SSIPDL Trigger: TAGGTCAGGTATGGAGGACCAGCCCTGTGATTCCTG...TCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGAGTGTGTCTCCCTTTCTaGTCTACTACCAGCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: HTLICVSRGLRDLSCAQGVCLPF*STTSNS Trigger: GGAATTGCTGGTAGTAGAGCAGAAAGGGAGACACAC...TCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAACAGAGACCTCTCATGTaGACAAGGAGGTGGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: APTHRHLYKERSPQKATQQRPLM*TRRWSE Trigger: TTCACTCCACCTCCTTGTGCACATGAGAGGTCTCTG...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTCAAGGTGTCCAGTCTTaGCATGGTCTCTCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIQGVQS*HGLSLQ Trigger: CTGCAGAGAGAGACCATGTCAAGACTGGACACCTTG...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 90 bp | AATTTTTATGCTTTTGCTAAAGAGTTCTCACCAAGGTGTCCAGTCTaGACATGGTCTCTCTCTGCAGTCCACAGAGACCCTGAACCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NFYAFAKEFSPRCPV*TWSLSAVHRDPEPV Trigger: CACAGGTTCAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACACCTTGGTGAGAACTCTTTAGCAAAAGCATAAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 90 bp | TGCACAAGGAGGTGGAGTGAACTTTATAAAATTCCTGTCACCTTCTaGGCTACTTATACCTCTAGAAAGGTAGATAGACCTAGGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: CTRRWSELYKIPVTF*ATYTSRKVDRPRNP Trigger: TGGGTTCCTAGGTCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATAAAGTTCACTCCACCTCCTTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 90 bp | AGGAAGAAACTATTTCTCTTGTACATAAATTCAGGTAAGGAATATTaGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RKKLFLLYINSGKEY*ENNRNVLADINVVV Trigger: CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTTACCTGAATTTATGTACAAGAGAAATAGTTTCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR GCA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGATGGAGCTTATGTCTGTaGTATAGATTGTGGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: YKIPVTFLATYTSRKVDRWSLCL*YRLWVL Trigger: TAAAACCCACAATCTATAGCACAGACATAAGCTCCA...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CCA 72 bp | GCTAAAGAGTTCTCACCAAGGTGTCCAGTCTTGACATaGTCTCTCTCTGCAGTCCACAGAGACCCTGAACCT | + |
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Preference number: 3 (lower is better) Translates to: AKEFSPRCPVLT*SLSAVHRDPEP Trigger: AGGTTCAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACACCTTGGTGAGAACTCTTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAACCAAGGTGTCCAGTCTaGACATGGTCTCTCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: APTHRHLYKERSPQKATQPRCPV*TWSLSA Trigger: TGCAGAGAGAGACCATGTCAAGACTGGACACCTTGG...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR TCA 72 bp | CTTTTGCTAAAGAGTTCTCACCAAGGTGTCCAGTCTTaGCATGGTCTCTCTCTGCAGTCCACAGAGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: LLLKSSHQGVQS*HGLSLQSTETL Trigger: CAGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACACCTTGGTGAGAACTCTTTAGCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR TCA 72 bp | ATCCCCTCAAAAGGCAACACAACCACAAGCCTGCAGTaGTCTGCAGTAAAGACAGTGAACACCAAGCACACC | + |
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Preference number: 3 (lower is better) Translates to: IPSKGNTTTSLQ*SAVKTVNTKHT Trigger: GGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTTGTGGTTGTGTTGCCTTTTGAGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR GCA 72 bp | CTCAAAAGGCAACACAACCACAAGCCTGCAGTGATCTaGAGTAAAGACAGTGAACACCAAGCACACCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: LKRQHNHKPAVI*SKDSEHQAHPD Trigger: ATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTTGTGGTTGTGTTGCCTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CCA 72 bp | CCGAGGGCTCAGAGACCTCTCATGTGCACAAGGAGGTaGAGTGAACTTTATAAAATTCCTGTCACCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: PRAQRPLMCTRR*SELYKIPVTFL Trigger: CAAGAAGGTGACAGGAATTTTATAAAGTTCACTCCACCTCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR GCA 72 bp | GATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTaGACAAGGAGGTGGAGTGAACTTTATAAAATTCCT | + |
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Preference number: 3 (lower is better) Translates to: DLCFPRAQRPLM*TRRWSELYKIP Trigger: AGGAATTTTATAAAGTTCACTCCACCTCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAATCAGGTAAGGAATATTaGGAAAACAACCGTAACGTG | + |
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Preference number: 3 (lower is better) Translates to: APTHRHLYKERSPQKATQSGKEY*ENNRNV Trigger: CACGTTACGGTTGTTTTCCAAATATTCCTTACCTGA...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTTTCTCCAAGGCGGGATaGGGGCCGGCCTCCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CSKDSEHQAHPDLCFPRAFSKAG*GPASRA Trigger: TGCTCGGGAGGCCGGCCCTCATCCCGCCTTGGAGAA...AGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | AAGCCTGCAGTGATCTGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGGGAAAGCCATCATGCTaGATCCCCAGGCTGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KPAVICSKDSEHQAHPDLGKPSC*IPRLCP Trigger: GGGACACAGCCTGGGGATGCAGCATGATGGCTTTCC...CAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AAGCCTGCAGTGATCTGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGAGGCTGTGTCCCAGCTaGTGTGCCATTCTGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KPAVICSKDSEHQAHPDLRLCPS*CAILFP Trigger: TGGGAACAGAATGGCACATCAGCTGGGACACAGCCT...CAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTCTTCTGCTCCGCCAATaGATAACTCTGAGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: NTKHTLICVSRGLRDLSCLLLRQ*ITLSTA Trigger: AGCAGTGCTCAGAGTTATTCATTGGCGGAGCAGAAG...ACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAACACAGCAGGGATTGGTaGACTCCTGAACTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: APTHRHLYKERSPQKATQHSRDW*TPELAH Trigger: GTGGGCCAGTTCAGGAGTGCACCAATCCCTGCTGTG...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTATGCATGCTGGTTTCTaGTCCTGCAGAAATTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NTKHTLICVSRGLRDLSCMHAGF*SCRNCW Trigger: CCAGCAATTTCTGCAGGATCAGAAACCAGCATGCAT...ACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | AAGCCTGCAGTGATCTGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGCATGGAAAGCCATCATaGTGCATCCCCAGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KPAVICSKDSEHQAHPDLHGKPS*CIPRLC Trigger: ACACAGCCTGGGGATGCAGCATGATGGCTTTCCATG...CAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTTCCCCAAAGGACAGGTaGATGGAAAGCCATCATGCT | + |
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Preference number: 4 (lower is better) Translates to: CSKDSEHQAHPDLCFPRASPKDR*MESHHA Trigger: AGCATGATGGCTTTCCATGCACCTGTCCTTTGGGGA...AGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | CACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGACACACAAGTGAATCCTaGCTTCAGGACACATTTGTG | + |
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Preference number: 4 (lower is better) Translates to: HTLICVSRGLRDLSCAQGHTSES*LQDTFV Trigger: CACAAATGTGTCCTGAAGCCAGGATTCACTTGTGTG...TCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AAGCCTGCAGTGATCTGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGCGGGAAAGGGGTTGTTaGGTATGCATGCTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPAVICSKDSEHQAHPDLRERGC*VCMLVS Trigger: AGAAACCAGCATGCATACTCAACAACCCCTTTCCCG...CAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | CACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGAACTGAGGAATTCCCTTaGTTTCAGAAGGTGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: HTLICVSRGLRDLSCAQGTEEFP*FQKVKD Trigger: ATCCTTCACCTTCTGAAAGCAAGGGAATTCCTCAGT...TCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 72 bp | GCTTTTGCTAAAGAGTTCTCACCAAGGTGTCCAGTCTaGACATGGTCTCTCTCTGCAGTCCACAGAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: AFAKEFSPRCPV*TWSLSAVHRDP Trigger: AGGGTCTCTGTGGACTGCAGAGAGAGACCATGTCAAGACTGGACACCTTGGTGAGAACTCTTTAGCAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTCACTGTAATTTGAACTaGGGAATTCCCTTGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: NTKHTLICVSRGLRDLSCHCNLN*GIPLLS Trigger: TGAAAGCAAGGGAATTCCTCAGTTCAAATTACAGTG...ACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TCAGGTAAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGGATTGGTGCACTCCTaGACTGGCCCACAGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: SGKEYLENNRNVLADINVGLVHS*TGPQSH Trigger: GTGTGACTGTGGGCCAGTTCAGGAGTGCACCAATCC...CACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTTACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTCTCCTTCCACACAAGTaGATCCTGGCTTCAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: FYTLGSTHPVTSIGDNFILLPHK*ILASGH Trigger: GTGTCCTGAAGCCAGGATTCACTTGTGTGGAAGGAG...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGGGTGCACTCCTGAACTaGCCCACAGTCACACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KEYLENNRNVLADINVVVGALLN*PTVTLF Trigger: GAAGAGTGTGACTGTGGGCCAGTTCAGGAGTGCACC...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TCAGGTAAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGCTGGTCATTCACCCTaGAGAAACCCCTCAGACCAT | + |
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Preference number: 4 (lower is better) Translates to: SGKEYLENNRNVLADINVAGHSP*RNPSDH Trigger: ATGGTCTGAGGGGTTTCTTCAGGGTGAATGACCAGC...CACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | AGCTTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCGTTGAGTATGCATGCTaGTTTCTGATCCTGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SFYTLGSTHPVTSIGDNFVEYAC*FLILQK Trigger: TTTCTGCAGGATCAGAAACCAGCATGCATACTCAAC...GAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTGAGGACTTGAAAAGCTaGAAGGAACTCTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIEDLKS*KELFPG Trigger: CCCTGGAAAGAGTTCCTTCCAGCTTTTCAAGTCCTC...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAAAGAAAGGATAATCATTaGATTCTTCGGGAAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: APTHRHLYKERSPQKATQRKDNH*ILRERG Trigger: ACCCCTTTCCCGAAGAATTCAATGATTATCCTTTCT...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGCCACTCCGTAATTATTaGTCCTTCCTCACACTGGCA | + |
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Preference number: 4 (lower is better) Translates to: KEYLENNRNVLADINVVVPLRNY*SFLTLA Trigger: TGCCAGTGTGAGGAAGGATCAATAATTACGGAGTGG...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTAAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGAGCCTTCTCCATTCCTaGAAGGAAACCCGTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SGKEYLENNRNVLADINVSLLHS*KETRWL Trigger: AAGCCAACGGGTTTCCTTGCAGGAATGGAGAAGGCT...CACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAATGCTGGTATTGGGTTTaGCTGCATTTGCTGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: APTHRHLYKERSPQKATQCWYWV*LHLLNF Trigger: AAAATTCAGCAAATGCAGCCAAACCCAATACCAGCA...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTATGTCTCTAGAATTGTaGTGTAAAAACATGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: CSKDSEHQAHPDLCFPRAMSLEL*CKNMVL Trigger: CAGAACCATGTTTTTACACCACAATTCTAGAGACAT...AGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | AGCTTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCAGGGAACAAATGTGTTaGCCTTATTTTTGCAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SFYTLGSTHPVTSIGDNFREQMC*PYFCSI Trigger: GATACTGCAAAAATAAGGGCAACACATTTGTTCCCT...GAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGTTTGCTGAATTTTATTaGAGGGATGCTTCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEYLENNRNVLADINVVVFAEFY*RDASIA Trigger: GGCGATGGAAGCATCCCTGCAATAAAATTCAGCAAA...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTATGAACTTTTCTTTGTaGTGGTCTTCTGCGTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIMNFSL*WSSALC Trigger: ACATAACGCAGAAGACCATCACAAAGAAAAGTTCAT...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGCTATACATTCACCATTaGTGCAAACCATTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEYLENNRNVLADINVVVLYIHH*CKPFHL Trigger: GAGATGGAATGGTTTGCAGCAATGGTGAATGTATAG...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGACAAAGGACAGGTGCATaGAAAGCCATCATGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKIPVTFLATYTSRKVDRQRTGA*KAIMLH Trigger: ATGCAGCATGATGGCTTTCCATGCACCTGTCCTTTG...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 72 bp | AGGTGGAGTGAACTTTATAAAATTCCTGTCACCTTCTaGGCTACTTATACCTCTAGAAAGGTAGATAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RWSELYKIPVTF*ATYTSRKVDRP Trigger: AGGTCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATAAAGTTCACTCCACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CCA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGATTTCTTAGCTTGTTTTaGGGTTTATTGTTCCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YKIPVTFLATYTSRKVDRFLSLF*GLLFLR Trigger: CCGCAGGAACAATAAACCCCAAAACAAGCTAAGAAA...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR TCA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGAATGTTCTCCATCATCTaGGTATTTTACTGGTTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: YKIPVTFLATYTSRKVDRMFSII*VFYWFD Trigger: ATCGAACCAGTAAAATACTCAGATGATGGAGAACAT...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| 3UTR CAA 72 bp | CTATTTCTCTTGTACATAAATTCAGGTAAGGAATATTaGGAAAACAACCGTAACGTGTTAGCGGACATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFLLYINSGKEY*ENNRNVLADIN Trigger: ATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTTACCTGAATTTATGTACAAGAGAAATAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR GCA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGATGTTGCCCTTATTTTTaGAGTATCCAAATCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YKIPVTFLATYTSRKVDRCCPYF*SIQICF Trigger: GAAACAGATTTGGATACTGCAAAAATAAGGGCAACA...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 90 bp | CTCTCCTTCCACACAAGTGAATCCTGGCTTCAGGACACATTTGTGTaGGTCACAGCAGGGATTGGTGCACTCCTGAACTGGCCCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFHTSESWLQDTFV*VTAGIGALLNWPTV Trigger: GACTGTGGGCCAGTTCAGGAGTGCACCAATCCCTGCTGTGACGCACACAAATGTGTCCTGAAGCCAGGATTCACTTGTGTGGAAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTAAACCCCTCAGACCATaGCAAGTGCTGATACTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTKHTLICVSRGLRDLSCKPLRP*QVLILA Trigger: TGCTAGTATCAGCACTTGCAATGGTCTGAGGGGTTT...ACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | GGCGGGATGAGGGCCGGCCTCCCGAGCAGTATATCTTCCCACATTTaGGATCTTTCTCTTCACAGGGAACAAATGTGTTGCCCTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGMRAGLPSSISSHI*DLSLHREQMCCPYF Trigger: AAAATAAGGGCAACACATTTGTTCCCTGTGAAGAGAAAGATCTCAAATGTGGGAAGATATACTGCTCGGGAGGCCGGCCCTCATCCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | CACACCCTGATCTGTGTTTCCCGAGGGCTCAGAGACCTCTCATGTGCACAAGGATTGCTGGTATTGGGTTaGGCTGCATTTGCTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: HTLICVSRGLRDLSCAQGLLVLG*AAFAEF Trigger: AAATTCAGCAAATGCAGCCAAACCCAATACCAGCAA...TCCTTGTGCACATGAGAGGTCTCTGAGCCCTCGGGAAACACAGATCAGGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | GCTCCCACCCACAGACATCTGTATAAGGAAAGATCCCCTCAAAAGGCAACACAAGAGAGGAGCAGATGGTaGAGTTGTAGGCCTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: APTHRHLYKERSPQKATQERSRW*SCRPSP Trigger: TGGAGAAGGCCTACAACTCAACCATCTGCTCCTCTC...TTGTGTTGCCTTTTGAGGGGATCTTTCCTTATACAGATGTCTGTGGGTGGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | GTGCATGGAAAGCCATCATGCTGCATCCCCAGGCTGTGTCCCAGCTaGTGTGCCATTCTGTTCCCAATTATATTTACATCTGGTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHGKPSCCIPRLCPS*CAILFPIIFTSGRR Trigger: TCTTCTACCAGATGTAAATATAATTGGGAACAGAATGGCACATCAGCTGGGACACAGCCTGGGGATGCAGCATGATGGCTTTCCATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | CTTTCTTCATCTGACATGATTCACAGCACTCTCCTTCCACACAAGTaGATCCTGGCTTCAGGACACATTTGTGTGCGTCACAGCAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSDMIHSTLLPHK*ILASGHICVRHSRD Trigger: ATCCCTGCTGTGACGCACACAAATGTGTCCTGAAGCCAGGATTCACTTGTGTGGAAGGAGAGTGCTGTGAATCATGTCAGATGAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | CTTCACATTCTTAAGATTATAGGCTTTATCTTCTCCAAGGCGGGATaGGGGCCGGCCTCCCGAGCAGTATATCTTCCCACATTTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LHILKIIGFIFSKAG*GPASRAVYLPTFEI Trigger: GATCTCAAATGTGGGAAGATATACTGCTCGGGAGGCCGGCCCTCATCCCGCCTTGGAGAAGATAAAGCCTATAATCTTAAGAATGTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
||
| CDS CCA 90 bp | TTTAAGGCTTCTCCCCACTCCGTAATTATTGATCCTTCCTCACACTaGCACTCAGGTTCGTTGTCATCCACATCGTTTTCATCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: FKASPHSVIIDPSSH*HSGSLSSTSFSSHG Trigger: TCCGTGCGATGAAAACGATGTGGATGACAACGAACCTGAGTGCCAGTGTGAGGAAGGATCAATAATTACGGAGTGGGGAGAAGCCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | CATTCATTTTTCGCTAGTCTGCATACGGCCCCTTCTTTCTTCATCTaGCATGATTCACAGCACTCTCCTTCCACACAAGTGAATCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSFFASLHTAPSFFI*HDSQHSPSTQVNPG Trigger: GCCAGGATTCACTTGTGTGGAAGGAGAGTGCTGTGAATCATGTCAGATGAAGAAAGAAGGGGCCGTATGCAGACTAGCGAAAAATGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 90 bp | TGTTCTCCATCATCTGAGTATTTTACTGGTTCGATGAGATACCGCTaGTCATTCACCCTGAAGAAACCCCTCAGACCATTGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSPSSEYFTGSMRYR*SFTLKKPLRPLQVL Trigger: CAGCACTTGCAATGGTCTGAGGGGTTTCTTCAGGGTGAATGACCAGCGGTATCTCATCGAACCAGTAAAATACTCAGATGATGGAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 90 bp | GTTCGTTGTCATCCACATCGTTTTCATCGCACGGAGAGGAGCAGATaGTTGAGTTGTAGGCCTTCTCCATTTCTATACATTCACCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRCHPHRFHRTERSR*LSCRPSPFLYIHHC Trigger: GCAATGGTGAATGTATAGAAATGGAGAAGGCCTACAACTCAACCATCTGCTCCTCTCCGTGCGATGAAAACGATGTGGATGACAACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | TTGAATTCTTCGGGAAAGGGGTTGTTGAGTATGCATGCTGGTTTCTaGTCCTGCAGAAATTGCTGGTATTGGGTTTGGCTGCATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNSSGKGLLSMHAGF*SCRNCWYWVWLHLL Trigger: CAGCAAATGCAGCCAAACCCAATACCAGCAATTTCTGCAGGATCAGAAACCAGCATGCATACTCAACAACCCCTTTCCCGAAGAATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 90 bp | CAGAAATTGCTGGTATTGGGTTTGGCTGCATTTGCTGAATTTTATTaGAGGGATGCTTCCATCGCCCATCACACATTTCCCCAAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QKLLVLGLAAFAEFY*RDASIAHHTFPQRT Trigger: TGTCCTTTGGGGAAATGTGTGATGGGCGATGGAAGCATCCCTGCAATAAAATTCAGCAAATGCAGCCAAACCCAATACCAGCAATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGCAGTGATCTGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGATGAATGATGGAGCCTaGGTAAAAACAGTGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPAVICSKDSEHQAHPDLMNDGA*VKTVIQ Trigger: TTGGATCACTGTTTTTACCAAGGCTCCATCATTCAT...CAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCAGATCACTGCAGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCTTGTTTTGGGGTTTATaGTTCCTGCGGTACACATAC | + |
|
Preference number: 5 (lower is better) Translates to: SFYTLGSTHPVTSIGDNFLFWGL*FLRYTY Trigger: GTATGTGTACCGCAGGAACAATAAACCCCAAAACAA...GAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTGTGTTGCCCTTATTTTaGCAGTATCCAAATCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSKDSEHQAHPDLCFPRAVLPLF*QYPNLF Trigger: AAACAGATTTGGATACTGCAAAAATAAGGGCAACAC...AGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTAAAGACAGTGAACACCAAGCACACCCTGATCTGTGTTTCCCGAGGGCTTATATCTTCCCACATTaGAGATCTTTCTCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CSKDSEHQAHPDLCFPRAYIFPH*RSFSSQ Trigger: CTGTGAAGAGAAAGATCTCAAATGTGGGAAGATATA...AGCCCTCGGGAAACACAGATCAGGGTGTGCTTGGTGTTCACTGTCTTTACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCAACAATCCCCCTTTCTaGAATGTGAGAAATAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFYTLGSTHPVTSIGDNFNNPPF*NVRNKD Trigger: GTCCTTATTTCTCACATTCAAGAAAGGGGGATTGTT...GAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTAGGATGAACCAGTTCTaGACCCTCTACTCCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIRMNQF*TLYSNN Trigger: ATTGTTGGAGTAGAGGGTCAAGAACTGGTTCATCCT...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTATTCCTCTTGAGTCCTaGCTGACAGATTTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIIPLES*LTDFSV Trigger: CACACTGAAATCTGTCAGCAAGGACTCAAGAGGAAT...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTCACATTATCAGTTaGCTTAGGGTCTGCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFYTLGSTHPVTSIGDNFIHIIS*LRVCNS Trigger: GGAATTGCAGACCCTAAGCAAACTGATAATGTGAAT...GAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | GGGTGCCTTGACATTGTATTTGTACACCAAATGTTCTCCATCATCTaGGTATTTTACTGGTTCGATGAGATACCGCTGGTCATTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCLDIVFVHQMFSII*VFYWFDEIPLVIHP Trigger: AGGGTGAATGACCAGCGGTATCTCATCGAACCAGTAAAATACTCAGATGATGGAGAACATTTGGTGTACAAATACAATGTCAAGGCACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 90 bp | AGCCAGTACACACTTCAGAAATATCGCATTCATTTTTCGCTAGTCTaGATACGGCCCCTTCTTTCTTCATCTGACATGATTCACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SQYTLQKYRIHFSLV*IRPLLSSSDMIHST Trigger: AGTGCTGTGAATCATGTCAGATGAAGAAAGAAGGGGCCGTATGCAGACTAGCGAAAAATGAATGCGATATTTCTGAAGTGTGTACTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 90 bp | TCACAGCCACTTTGGGTATCCAGGTTCAAATTCACATTATCAGTTTaGTTAGGGTCTGCAATTCCTCTTGAGTCCTTGCTGACAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQPLWVSRFKFTLSV*LGSAIPLESLLTDF Trigger: GAAATCTGTCAGCAAGGACTCAAGAGGAATTGCAGACCCTAAGCAAACTGATAATGTGAATTTGAACCTGGATACCCAAAGTGGCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGCAGAAATTGCTGGTATaGGGTTTGGCTGCATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEYLENNRNVLADINVVVQKLLV*GLAAFA Trigger: AGCAAATGCAGCCAAACCCAATACCAGCAATTTCTG...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 90 bp | TCATACAACAATTCTTCTTCATATTCCTCCGGTATGTCAGAGTCATaGATGCGTTCAAGATCCCGTTTGTGTAGCAAGGGAAGCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SYNNSSSYSSGMSES*MRSRSRLCSKGSFL Trigger: TAAAAAGCTTCCCTTGCTACACAAACGGGATCTTGAACGCATCCATGACTCTGACATACCGGAGGAATATGAAGAAGAATTGTTGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | AAGGAATATTTGGAAAACAACCGTAACGTGTTAGCGGACATCAATGTGGTGGTGGCCTTGACATTGTATTaGTACACCAAATGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEYLENNRNVLADINVVVALTLY*YTKCSP Trigger: TGGAGAACATTTGGTGTACAAATACAATGTCAAGGC...CACCACCACATTGATGTCCGCTAACACGTTACGGTTGTTTTCCAAATATTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TTCTACACCCTGGGTAGTACCCATCCTGTCACTTCCATAGGAGACAATTTCATTAGGAGAGCTTTGAACTaGCTTCATCTTAATGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FYTLGSTHPVTSIGDNFIRRALN*LHLNAF Trigger: AAATGCATTAAGATGAAGCAAGTTCAAAGCTCTCCT...AATGAAATTGTCTCCTATGGAAGTGACAGGATGGGTACTACCCAGGGTGTAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 90 bp | TGGAGCCTTGGTAAAAACAGTGATCCAAGATCTGTGGATGCTTGGTaGACACTTCTCTCTTTACGTTGTAGTATGTTTCACTGTAATTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLGKNSDPRSVDAW*TLLSLRCSMFHCNL Trigger: CAAATTACAGTGAAACATACTACAACGTAAAGAGAGAAGTGTTCACCAAGCATCCACAGATCTTGGATCACTGTTTTTACCAAGGCTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 90 bp | TTCATGAATGATGGAGCCTTGGTAAAAACAGTGATCCAAGATCTGTaGATGCTTGGTGAACACTTCTCTCTTTACGTTGTAGTATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FMNDGALVKTVIQDL*MLGEHFSLYVVVCF Trigger: GAAACATACTACAACGTAAAGAGAGAAGTGTTCACCAAGCATCCACAGATCTTGGATCACTGTTTTTACCAAGGCTCCATCATTCATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGATGGGTTTGGCTGCATTaGCTGAATTTTATTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKIPVTFLATYTSRKVDRWVWLH*LNFIAG Trigger: CCCTGCAATAAAATTCAGCAAATGCAGCCAAACCCA...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS-3UTR CAA 90 bp | TATAAAATTCCTGTCACCTTCTTGGCTACTTATACCTCTAGAAAGGTAGATAGATCTATACATTCACCATaGCTGCAAACCATTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: YKIPVTFLATYTSRKVDRSIHSP*LQTIPS Trigger: AGATGGAATGGTTTGCAGCAATGGTGAATGTATAGA...TCTATCTACCTTTCTAGAGGTATAAGTAGCCAAGAAGGTGACAGGAATTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 90 bp | AGCAACAACAAACAGTTCAATGAACTTTTCTTTGTGATGGTCTTCTaGGTTATGTTCTTCTATATTCTCAACATCTATCAGAGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNKQFNELFFVMVF*VMFFYILNIYQSRL Trigger: AAGTCTGCTCTGATAGATGTTGAGAATATAGAAGAACATAACGCAGAAGACCATCACAAAGAAAAGTTCATTGAACTGTTTGTTGTTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 72 bp | TCAGGACACATTTGTGTGCGTCACAGCAGGGATTGGTaGACTCCTGAACTGGCCCACAGTCACACTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGHICVRHSRDW*TPELAHSHTLL Trigger: GAGAAGAGTGTGACTGTGGGCCAGTTCAGGAGTGCACCAATCCCTGCTGTGACGCACACAAATGTGTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 72 bp | CTCTCTTCTGCTCCGCCAATGAATAACTCTGAGCACTaGTCATTCCGGGTGGGACACAGCCCCATAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSSAPPMNNSEH*SFRVGHSPIKQ Trigger: CTGCTTTATGGGGCTGTGTCCCACCCGGAATGAGCAGTGCTCAGAGTTATTCATTGGCGGAGCAGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
||
| CDS GCA 72 bp | CACACAAGTGAATCCTGGCTTCAGGACACATTTGTGTaGGTCACAGCAGGGATTGGTGCACTCCTGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: HTSESWLQDTFV*VTAGIGALLNW Trigger: CCAGTTCAGGAGTGCACCAATCCCTGCTGTGACGCACACAAATGTGTCCTGAAGCCAGGATTCACTTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | CATAAAGCAGTAGCCTTCTCCATTCCTGCAAGGAAACCCGTTGGCTaGGAACTCGTCTTTAGGGCACTCAGGGGAGTAGCCAGTACACAC | + |
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Preference number: 6 (lower is better) Translates to: HKAVAFSIPARKPVG*ELVFRALRGVASTH Trigger: GTGTGTACTGGCTACTCCCCTGAGTGCCCTAAAGACGAGTTCCAAGCCAACGGGTTTCCTTGCAGGAATGGAGAAGGCTACTGCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | CTTAAGATTATAGGCTTTATCTTCTCCAAGGCGGGATaGGGGCCGGCCTCCCGAGCAGTATATCTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: LKIIGFIFSKAG*GPASRAVYLPT Trigger: TGTGGGAAGATATACTGCTCGGGAGGCCGGCCCTCATCCCGCCTTGGAGAAGATAAAGCCTATAATCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | AGGCGGGATGAGGGCCGGCCTCCCGAGCAGTATATCTTCCCACATTaGAGATCTTTCTCTTCACAGGGAACAAATGTGTTGCCCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: RRDEGRPPEQYIFPH*RSFSSQGTNVLPLF Trigger: AAATAAGGGCAACACATTTGTTCCCTGTGAAGAGAAAGATCTCAAATGTGGGAAGATATACTGCTCGGGAGGCCGGCCCTCATCCCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | CACTCCGTAATTATTGATCCTTCCTCACACTGGCACTCAGGTTCGTaGTCATCCACATCGTTTTCATCGCACGGAGAGGAGCAGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: HSVIIDPSSHWHSGS*SSTSFSSHGEEQMV Trigger: AACCATCTGCTCCTCTCCGTGCGATGAAAACGATGTGGATGACAACGAACCTGAGTGCCAGTGTGAGGAAGGATCAATAATTACGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | TCGGGAAAGGGGTTGTTGAGTATGCATGCTGGTTTCTaGTCCTGCAGAAATTGCTGGTATTGGGTTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGKGLLSMHAGF*SCRNCWYWVWL Trigger: CAGCCAAACCCAATACCAGCAATTTCTGCAGGATCAGAAACCAGCATGCATACTCAACAACCCCTTTCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | TCTGACATGATTCACAGCACTCTCCTTCCACACAAGTaGATCCTGGCTTCAGGACACATTTGTGTGCGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SDMIHSTLLPHK*ILASGHICVRH Trigger: GTGACGCACACAAATGTGTCCTGAAGCCAGGATTCACTTGTGTGGAAGGAGAGTGCTGTGAATCATGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | TTCGCTAGTCTGCATACGGCCCCTTCTTTCTTCATCTaGCATGATTCACAGCACTCTCCTTCCACACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: FASLHTAPSFFI*HDSQHSPSTQV Trigger: CACTTGTGTGGAAGGAGAGTGCTGTGAATCATGTCAGATGAAGAAAGAAGGGGCCGTATGCAGACTAGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | ATTATTGATCCTTCCTCACACTGGCACTCAGGTTCGTaGTCATCCACATCGTTTTCATCGCACGGAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: IIDPSSHWHSGS*SSTSFSSHGEE Trigger: CTCCTCTCCGTGCGATGAAAACGATGTGGATGACAACGAACCTGAGTGCCAGTGTGAGGAAGGATCAATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | AAGCCATCATGCTGCATCCCCAGGCTGTGTCCCAGCTaGTGTGCCATTCTGTTCCCAATTATATTTACATCT | + |
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Preference number: 6 (lower is better) Translates to: KPSCCIPRLCPS*CAILFPIIFTS Trigger: AGATGTAAATATAATTGGGAACAGAATGGCACATCAGCTGGGACACAGCCTGGGGATGCAGCATGATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 72 bp | ATTGAGCCCCACGCAGGAGTGATTGGTAGCATAGGGTaGCTTGACATTGTATTTGTACACCAAATGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IEPHAGVIGSIG*LDIVFVHQMFS Trigger: GGAGAACATTTGGTGTACAAATACAATGTCAAGGCACCCTATGCTACCAATCACTCCTGCGTGGGGCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | CCACATCGTTTTCATCGCACGGAGAGGAGCAGATGGTaGAGTTGTAGGCCTTCTCCATTTCTATACATTCAC | + |
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Preference number: 6 (lower is better) Translates to: PHRFHRTERSRW*SCRPSPFLYIH Trigger: GTGAATGTATAGAAATGGAGAAGGCCTACAACTCAACCATCTGCTCCTCTCCGTGCGATGAAAACGATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | TATGCATGCTGGTTTCTGATCCTGCAGAAATTGCTGGTATTGGGTTaGGCTGCATTTGCTGAATTTTATTGCAGGGATGCTTCCATCGCC | + |
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Preference number: 6 (lower is better) Translates to: YACWFLILQKLLVLG*AAFAEFYCRDASIA Trigger: GGCGATGGAAGCATCCCTGCAATAAAATTCAGCAAATGCAGCCAAACCCAATACCAGCAATTTCTGCAGGATCAGAAACCAGCATGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 72 bp | TCATCTGAGTATTTTACTGGTTCGATGAGATACCGCTaGTCATTCACCCTGAAGAAACCCCTCAGACCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSEYFTGSMRYR*SFTLKKPLRPL Trigger: CAATGGTCTGAGGGGTTTCTTCAGGGTGAATGACCAGCGGTATCTCATCGAACCAGTAAAATACTCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | GTTGAGTATGCATGCTGGTTTCTGATCCTGCAGAAATTGCTGGTATaGGGTTTGGCTGCATTTGCTGAATTTTATTGCAGGGATGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VEYACWFLILQKLLV*GLAAFAEFYCRDAS Trigger: GGAAGCATCCCTGCAATAAAATTCAGCAAATGCAGCCAAACCCAATACCAGCAATTTCTGCAGGATCAGAAACCAGCATGCATACTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | AAAGGGGTTGTTGAGTATGCATGCTGGTTTCTGATCCTGCAGAAATaGCTGGTATTGGGTTTGGCTGCATTTGCTGAATTTTATTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KGVVEYACWFLILQK*LVLGLAAFAEFYCR Trigger: CCTGCAATAAAATTCAGCAAATGCAGCCAAACCCAATACCAGCAATTTCTGCAGGATCAGAAACCAGCATGCATACTCAACAACCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 72 bp | CTTTGGGTATCCAGGTTCAAATTCACATTATCAGTTTaGTTAGGGTCTGCAATTCCTCTTGAGTCCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWVSRFKFTLSV*LGSAIPLESLL Trigger: CAGCAAGGACTCAAGAGGAATTGCAGACCCTAAGCAAACTGATAATGTGAATTTGAACCTGGATACCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 72 bp | GATGGAGCCTTGGTAAAAACAGTGATCCAAGATCTGTaGATGCTTGGTGAACACTTCTCTCTTTACGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: DGALVKTVIQDL*MLGEHFSLYVV Trigger: TACAACGTAAAGAGAGAAGTGTTCACCAAGCATCCACAGATCTTGGATCACTGTTTTTACCAAGGCTCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 72 bp | GTTCCAGAATTAACCAGGCCCATGTCTCTAGAATTGTaGTGTAAAAACATGGTTCTGCATTTGATGGTCACG | + |
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Preference number: 6 (lower is better) Translates to: VPELTRPMSLEL*CKNMVLHLMVT Trigger: CGTGACCATCAAATGCAGAACCATGTTTTTACACCACAATTCTAGAGACATGGGCCTGGTTAATTCTGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | TCTCCACATTTTGTTCCAGAATTAACCAGGCCCATGTCTCTAGAATaGTGGTGTAAAAACATGGTTCTGCATTTGATGGTCACGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SPHFVPELTRPMSLE*WCKNMVLHLMVTFC Trigger: GCAGAACGTGACCATCAAATGCAGAACCATGTTTTTACACCACAATTCTAGAGACATGGGCCTGGTTAATTCTGGAACAAAATGTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS GCA 72 bp | ACACTTCAGAAATATCGCATTCATTTTTCGCTAGTCTaGATACGGCCCCTTCTTTCTTCATCTGACATGATT | + |
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Preference number: 6 (lower is better) Translates to: TLQKYRIHFSLV*IRPLLSSSDMI Trigger: AATCATGTCAGATGAAGAAAGAAGGGGCCGTATGCAGACTAGCGAAAAATGAATGCGATATTTCTGAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | CAGTTCTTGACCCTCTACTCCAACAATCCCCCTTTCTaGAATGTGAGAAATAAGGACAGTCATCCAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: QFLTLYSNNPPF*NVRNKDSHPKY Trigger: ATATTTTGGATGACTGTCCTTATTTCTCACATTCAAGAAAGGGGGATTGTTGGAGTAGAGGGTCAAGAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | ACTAGCAGCAGAATCAAATTCATGAATGATGGAGCCTaGGTAAAAACAGTGATCCAAGATCTGTGGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: TSSRIKFMNDGA*VKTVIQDLWML Trigger: AAGCATCCACAGATCTTGGATCACTGTTTTTACCAAGGCTCCATCATTCATGAATTTGATTCTGCTGCTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CCA 72 bp | GCCAAGTTGAAAAATGCAATAAGGTACTTTCTAGATTaGACACTATTTCTATCTTGTCCCCAGCTGACCATA | + |
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Preference number: 6 (lower is better) Translates to: AKLKNAIRYFLD*TLFLSCPQLTI Trigger: TATGGTCAGCTGGGGACAAGATAGAAATAGTGTCCAATCTAGAAAGTACCTTATTGCATTTTTCAACTTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 90 bp | ACTGTTTCTTGCCAAGTTGAAAAATGCAATAAGGTACTTTCTAGATaGGACACTATTTCTATCTTGTCCCCAGCTGACCATATTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: TVSCQVEKCNKVLSR*DTISILSPADHISK Trigger: TTTTGAAATATGGTCAGCTGGGGACAAGATAGAAATAGTGTCCAATCTAGAAAGTACCTTATTGCATTTTTCAACTTGGCAAGAAACAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS TCA 72 bp | TCTTTACGTTGTAGTATGTTTCACTGTAATTTGAACTaGGGAATTCCCTTGCTTTCAGAAGGTGAAGGATTA | + |
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Preference number: 6 (lower is better) Translates to: SLRCSMFHCNLN*GIPLLSEGEGL Trigger: TAATCCTTCACCTTCTGAAAGCAAGGGAATTCCTCAGTTCAAATTACAGTGAAACATACTACAACGTAAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | AATAAGGTACTTTCTAGATTGGACACTATTTCTATCTaGTCCCCAGCTGACCATATTTCAAAACCAGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: NKVLSRLDTISI*SPADHISKPAK Trigger: TTTAGCTGGTTTTGAAATATGGTCAGCTGGGGACAAGATAGAAATAGTGTCCAATCTAGAAAGTACCTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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| CDS CAA 72 bp | TCTCTAGAATTGTGGTGTAAAAACATGGTTCTGCATTaGATGGTCACGTTCTGCTTCACATTCTTAAGATTA | + |
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Preference number: 6 (lower is better) Translates to: SLELWCKNMVLH*MVTFCFTFLRL Trigger: TAATCTTAAGAATGTGAAGCAGAACGTGACCATCAAATGCAGAACCATGTTTTTACACCACAATTCTAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022640.8 |
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