Pregenerated sensors for ADAM6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051804Ensembl transcript IDs: ENSMUST00000063317.4
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGCAGGTGTTCCTTCTCTaGCAGACACAGTACCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQQVFLL*QTQYPS Trigger: TGAGGGGTACTGTGTCTGCCAGAGAAGGAACACCTG...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATAAGCCGACCCTCCTaGAACTGCAAACTCAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQISRPS*NCKLKS Trigger: CGACTTGAGTTTGCAGTTCCAGGAGGGTCGGCTTAT...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGCTCTGGCCCCGAAAATaGAAGCTATATGAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQLWPRK*KLYESS Trigger: ACTGCTCTCATATAGCTTGCATTTTCGGGGCCAGAG...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTTAGTCCCTCTTCTTTaGACTCTGGAGGCTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQLVPLL*TLEASN Trigger: GTTGGAAGCCTCCAGAGTGCAAAGAAGAGGGACTAA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTGGTGTACACAGTCATaGGAAAGACATAGTACCGCA | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQWCTQS*ERHSTA Trigger: TGCGGTACTATGTCTTTCTCATGACTGTGTACACCA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGGAGCCACAGTCACACTaGTCATCGTTATCTACTTTG | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQEPQSH*SSLSTL Trigger: CAAAGTAGATAACGATGAGCAGTGTGACTGTGGCTC...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTACCAGGTGTTAACCTaGAATCATTTCCACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQYQVLT*NHFHSR Trigger: CCTGCTGTGGAAATGATTGCAGGTTAACACCTGGTA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCGGGACCCACTGTCTATaGTCCCACTTAGTCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFGTHCL*SHLVPL Trigger: AAGAGGGACTAAGTGGGAGCATAGACAGTGGGTCCC...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTGGTCATCTAACTTCATaGCCCCTGACAGGCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFGHLTS*PLTGPH Trigger: ATGGGGGCCTGTCAGGGGTCATGAAGTTAGATGACC...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTATTGTGTGCCTTTaGACTGGAGGGGACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFFIVCL*TGGDPL Trigger: CAGTGGGTCCCCTCCAGTTCAAAGGCACACAATAAA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTGTGAGGCTTTCTTCTaGTCTAGTACAATGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQCEAFF*SSTMPK Trigger: TTTGGGCATTGTACTAGAGCAGAAGAAAGCCTCACA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTCCCTTGCTGGTCCTTaGCCAGAACGTAAAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFSLAGP*PERKVA Trigger: AGCTACTTTACGTTCTGGGCAAGGACCAGCAAGGGA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTGCTCCAGTGCTTCCATaGATTCATAGGCCCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFAPVLP*IHRPCV Trigger: GACACAGGGCCTATGAATGCATGGAAGCACTGGAGC...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTCAGCTGGATTAACCTaGTTATCTTGTGGCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFSAGLT*LSCGPY Trigger: GTATGGGCCACAAGATAACCAGGTTAATCCAGCTGA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTTCTGGGAGCTCCATCTaGATATTCCAATCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFSGSSI*IFQSGG Trigger: TCCTCCAGATTGGAATATGCAGATGGAGCTCCCAGA...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATGTTCTTGCAAATATaGAAGATTGGTGACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQMFLQI*KIGDIG Trigger: ACCAATGTCACCAATCTTCCATATTTGCAAGAACAT...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTCCACTGCAAGCTCCTTaGTCACAGAACTTACTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFPLQAP*SQNLLL Trigger: CAAAAGTAAGTTCTGTGATCAAGGAGCTTGCAGTGG...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCGTATGTTGCGATCAGTaGAGTTACCTTTATAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFVCCDQ*SYLYSS Trigger: ACTGCTATAAAGGTAACTGCACTGATCGCAACATAC...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTATACTCCTCTCAGCTaGATTAACCTGGTTATCTTG | + |
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Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFYTPLS*INLVIL Trigger: CAAGATAACCAGGTTAATCCAGCTGAGAGGAGTATA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCGTCATAGAAAAGACATaGCATCAGACCAGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFVIEKT*HQTRSI Trigger: AATACTCCTGGTCTGATGCCATGTCTTTTCTATGAC...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCCCCATTACAGTACTCTaGAAGATCACATATGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFPITVL*KITYVL Trigger: CAGAACATATGTGATCTTCCAGAGTACTGTAATGGG...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTTCTGCTCTAGTACAATaGCCAAATCGAAACCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFSALVQ*PNRNRC Trigger: ACAACGGTTTCGATTTGGGCATTGTACTAGAGCAGA...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTAAAATGCAAGCTATATaGGAGCAGTCTTTGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFKMQAI*EQSLCL Trigger: CAAGCACAAAGACTGCTCTCATATAGCTTGCATTTT...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR TCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTACAGAATTGGTTGCTTaGAAGTGGCCTTTTATAGCA | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFTELVA*KWPFIA Trigger: TGCTATAAAAGGCCACTTTCAAGCAACCAATTCTGT...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTAAAACTGCATTTTTCTaGGGTGCAGTCATAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFKTAFF*GAVITQ Trigger: TTGGGTTATGACTGCACCCCAGAAAAATGCAGTTTT...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTTATGTTGCTTATCTCTaGAAGGGAACAATTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFYVAYL*KGTIAE Trigger: TTCAGCAATTGTTCCCTTGCAGAGATAAGCAACATA...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTATTCTTTATCACAAATaGTACCAGGTGTTAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFILYHK*YQVLTC Trigger: GCAGGTTAACACCTGGTAGCATTTGTGATAAAGAAT...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTAATGCCAAAGAGCAGTaGAACAAAGAGGAAGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFNAKEQ*NKEEVN Trigger: ATTTACTTCCTCTTTGTTGCACTGCTCTTTGGCATT...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | CTGGAGGGGACCCACTGTCTATGCTCCCACTTAGTCCCTCTTCTTTaGACTCTGGAGGCTTCCAACCAAAATGACAATGGCAATTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: LEGTHCLCSHLVPLL*TLEASNQNDNGNSD Trigger: ATCGGAATTGCCATTGTCATTTTGGTTGGAAGCCTCCAGAGTGCAAAGAAGAGGGACTAAGTGGGAGCATAGACAGTGGGTCCCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGACTTTGGCTTGTCCCTaGCTGGTCCTTGCCCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQTLACP*LVLAQN Trigger: GTTCTGGGCAAGGACCAGCAAGGGACAAGCCAAAGT...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | TTTGTTTTATTGTGTGCCTTTGAACTGGAGGGGACCCACTGTCTATaGTCCCACTTAGTCCCTCTTCTTTGCACTCTGGAGGCTTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: FVLLCAFELEGTHCL*SHLVPLLCTLEASN Trigger: GTTGGAAGCCTCCAGAGTGCAAAGAAGAGGGACTAAGTGGGAGCATAGACAGTGGGTCCCCTCCAGTTCAAAGGCACACAATAAAACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | CAATCTGGAGGAGGGAGAACCTGTATTATGGCTCCAGTGCTTCCATaGATTCATAGGCCCTGTGTCATCAGACTCAGATACTATCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QSGGGRTCIMAPVLP*IHRPCVIRLRYYLR Trigger: TCTCAGATAGTATCTGAGTCTGATGACACAGGGCCTATGAATGCATGGAAGCACTGGAGCCATAATACAGGTTCTCCCTCCTCCAGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGGCATGGTGTCCCATCTaGCAGATAAGTGTCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQAWCPI*QISVIW Trigger: CCAGATGACACTTATCTGCAAGATGGGACACCATGC...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTTTTATTGTGTGCCTTaGAACTGGAGGGGACCCACT | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQFYCVP*NWRGPT Trigger: AGTGGGTCCCCTCCAGTTCAAAGGCACACAATAAAA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | TGGATGTGTAGCGTAGTTCTTACTAGATATTCTGGGAGCTCCATCTaGATATTCCAATCTGGAGGAGGGAGAACCTGTATTATGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: WMCSVVLTRYSGSSI*IFQSGGGRTCIMAP Trigger: TGGAGCCATAATACAGGTTCTCCCTCCTCCAGATTGGAATATGCAGATGGAGCTCCCAGAATATCTAGTAAGAACTACGCTACACATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CCA 90 bp | GAGATAAACTTCCACTGCAAGCTCCTTGATCACAGAACTTACTTTTaGAGCAGGGGGTACCATGTCTCACCATTCCAGCATCTGTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: EINFHCKLLDHRTYF*SRGYHVSPFQHLLF Trigger: AAACAACAGATGCTGGAATGGTGAGACATGGTACCCCCTGCTCCAAAAGTAAGTTCTGTGATCAAGGAGCTTGCAGTGGAAGTTTATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | CAGCTTGTCCTGATCAGCACAAGCATTGAATGTGAGGCTTTCTTCTaGTCTAGTACAATGCCCAAATCGAAACCGTTGTTTGTTGATGTC | + |
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Preference number: 5 (lower is better) Translates to: QLVLISTSIECEAFF*SSTMPKSKPLFVDV Trigger: GACATCAACAAACAACGGTTTCGATTTGGGCATTGTACTAGAGCAGAAGAAAGCCTCACATTCAATGCTTGTGCTGATCAGGACAAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCCTTAGTCCCTCTTCTTaGCACTCTGGAGGCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFLSPSS*HSGGFQ Trigger: TTGGAAGCCTCCAGAGTGCAAAGAAGAGGGACTAAG...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | TTTGGCTTGTCCCTTGCTGGTCCTTGCCCAGAACGTAAAGTAGCTTaGAAGTCTTCAAATCTAAAAATCTTAGTAACTCCTACACGAGTG | + |
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Preference number: 5 (lower is better) Translates to: FGLSLAGPCPERKVA*KSSNLKILVTPTRV Trigger: CACTCGTGTAGGAGTTACTAAGATTTTTAGATTTGAAGACTTGCAAGCTACTTTACGTTCTGGGCAAGGACCAGCAAGGGACAAGCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CCA 90 bp | GTAATTATAAGCCGACCCTCCTGGAACTGCAAACTCAAGTCGAAATaGATCAGAATTGGTGTACACAGTCATGAGAAAGACATAGTACCG | + |
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Preference number: 5 (lower is better) Translates to: VIISRPSWNCKLKSK*IRIGVHSHEKDIVP Trigger: CGGTACTATGTCTTTCTCATGACTGTGTACACCAATTCTGATCCATTTCGACTTGAGTTTGCAGTTCCAGGAGGGTCGGCTTATAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTCCAAGTAGGATGGCCTaGAGAACACCAGACTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFPSRMA*RTPDWN Trigger: GTTCCAGTCTGGTGTTCTCAAGGCCATCCTACTTGG...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGACAGTAGATGAAAGTTaGTCACCTGCAGCAGAATTA | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQTVDES*SPAAEL Trigger: TAATTCTGCTGCAGGTGACAAACTTTCATCTACTGT...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGTCTGCAAGGGAACAATaGCTGAAAGCATCTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQSAREQ*LKASVN Trigger: ATTAACAGATGCTTTCAGCAATTGTTCCCTTGCAGA...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGGCCATCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGCTTGTTTTTGTTTTATaGTGTGCCTTTGAACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPSRTVNLSSTLFPTDIQLVFVL*CAFELE Trigger: CTCCAGTTCAAAGGCACACAATAAAACAAAAACAAG...CTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGATGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS TCA 90 bp | CTGCAAACTCAAGTCGAAATGGATCAGAATTGGTGTACACAGTCATaGGAAAGACATAGTACCGCATATGAAGATTGGTCAGATAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LQTQVEMDQNWCTQS*ERHSTAYEDWSDRC Trigger: ACACCTATCTGACCAATCTTCATATGCGGTACTATGTCTTTCTCATGACTGTGTACACCAATTCTGATCCATTTCGACTTGAGTTTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | TTGCACAGCATAATTCTTTATCACAAATGCTACCAGGTGTTAACCTaGAATCATTTCCACAGCAGGGATCTGAATAACATGCCTTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LHSIILYHKCYQVLT*NHFHSRDLNNMPFG Trigger: CCCAAAAGGCATGTTATTCAGATCCCTGCTGTGGAAATGATTGCAGGTTAACACCTGGTAGCATTTGTGATAAAGAATTATGCTGTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 90 bp | AAGGACTGTAAGTGCAATTTGCACAGCATAATTCTTTATCACAAATaGTACCAGGTGTTAACCTGCAATCATTTCCACAGCAGGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: KDCKCNLHSIILYHK*YQVLTCNHFHSRDL Trigger: CAGATCCCTGCTGTGGAAATGATTGCAGGTTAACACCTGGTAGCATTTGTGATAAAGAATTATGCTGTGCAAATTGCACTTACAGTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTCCACTGCAAGCTCCTaGATCACAGAACTTACTTTT | + |
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Preference number: 5 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFSTASS*ITELTF Trigger: AAAAGTAAGTTCTGTGATCAAGGAGCTTGCAGTGGA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTACAGAATTGGTTGCTaGAAAGTGGCCTTTTATAGC | + |
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Preference number: 5 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFYRIGC*KVAFYS Trigger: GCTATAAAAGGCCACTTTCAAGCAACCAATTCTGTA...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | TCCAGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCCACTGGCTCTTGTTTTaGTTTTATTGTGTGCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SRTVNLSSTLFPTDIQIFHWLLF*FYCVPL Trigger: CAAAGGCACACAATAAAACAAAAACAAGAGCCAGTG...GAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS-3UTR CAA 90 bp | AGAACTGTGAACTTGAGTTCTACCTTGTTCCCTACTGACATTCAGATTTTCTTTGGAGTATTAAGTATGTaGCTTATCTCTGCAAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: RTVNLSSTLFPTDIQIFFGVLSM*LISARE Trigger: TTCCCTTGCAGAGATAAGCAACATACTTAATACTCC...AAAGAAAATCTGAATGTCAGTAGGGAACAAGGTAGAACTCAAGTTCACAGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 72 bp | TTGTGTGCCTTTGAACTGGAGGGGACCCACTGTCTATaGTCCCACTTAGTCCCTCTTCTTTGCACTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCAFELEGTHCL*SHLVPLLCTLE Trigger: CTCCAGAGTGCAAAGAAGAGGGACTAAGTGGGAGCATAGACAGTGGGTCCCCTCCAGTTCAAAGGCACACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CAA 72 bp | AGCAGGGGGTACCATGTCTCACCATTCCAGCATCTGTaGTTTCTGTCCCACGATGTTCATCAAGCCCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SRGYHVSPFQHL*FLSHDVHQAQS Trigger: GCTTTGGGCTTGATGAACATCGTGGGACAGAAACAACAGATGCTGGAATGGTGAGACATGGTACCCCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 72 bp | ACCCACTGTCTATGCTCCCACTTAGTCCCTCTTCTTTaGACTCTGGAGGCTTCCAACCAAAATGACAATGGC | + |
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Preference number: 6 (lower is better) Translates to: THCLCSHLVPLL*TLEASNQNDNG Trigger: GCCATTGTCATTTTGGTTGGAAGCCTCCAGAGTGCAAAGAAGAGGGACTAAGTGGGAGCATAGACAGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CCA 72 bp | AGCCGACCCTCCTGGAACTGCAAACTCAAGTCGAAATaGATCAGAATTGGTGTACACAGTCATGAGAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRPSWNCKLKSK*IRIGVHSHEKD Trigger: GTCTTTCTCATGACTGTGTACACCAATTCTGATCCATTTCGACTTGAGTTTGCAGTTCCAGGAGGGTCGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS GCA 72 bp | AGCGTAGTTCTTACTAGATATTCTGGGAGCTCCATCTaGATATTCCAATCTGGAGGAGGGAGAACCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: SVVLTRYSGSSI*IFQSGGGRTCI Trigger: AATACAGGTTCTCCCTCCTCCAGATTGGAATATGCAGATGGAGCTCCCAGAATATCTAGTAAGAACTACGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS TCA 72 bp | CAAGTCGAAATGGATCAGAATTGGTGTACACAGTCATaGGAAAGACATAGTACCGCATATGAAGATTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QVEMDQNWCTQS*ERHSTAYEDWS Trigger: TGACCAATCTTCATATGCGGTACTATGTCTTTCTCATGACTGTGTACACCAATTCTGATCCATTTCGACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CAA 72 bp | AAAAGACATGGCATCAGACCAGGAGTATTAAGTATGTaGCTTATCTCTGCAAGGGAACAATTGCTGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KRHGIRPGVLSM*LISAREQLLKA Trigger: TGCTTTCAGCAATTGTTCCCTTGCAGAGATAAGCAACATACTTAATACTCCTGGTCTGATGCCATGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS CAA 90 bp | TGTGAGGCTTTCTTCTGCTCTAGTACAATGCCCAAATCGAAACCGTaGTTTGTTGATGTCATAGCACTTAATATTAGCATTCTTAGCACT | + |
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Preference number: 6 (lower is better) Translates to: CEAFFCSSTMPKSKP*FVDVIALNISILST Trigger: AGTGCTAAGAATGCTAATATTAAGTGCTATGACATCAACAAACAACGGTTTCGATTTGGGCATTGTACTAGAGCAGAAGAAAGCCTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS TCA 72 bp | GGGAGCCACAGTCACACTGCTCATCGTTATCTACTTTaGAGTTTCCACAAAACTTATAAGTCAATGATGTAT | + |
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Preference number: 6 (lower is better) Translates to: GSHSHTAHRYLL*SFHKTYKSMMY Trigger: ATACATCATTGACTTATAAGTTTTGTGGAAACTTCAAAGTAGATAACGATGAGCAGTGTGACTGTGGCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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| CDS TCA 72 bp | AAAGCAGGTAAACCCAGAGATAATCGATTGATGGAATaGAACATGTTCTTGCAAATATGGAAGATTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: KAGKPRDNRLME*NMFLQIWKIGD Trigger: GTCACCAATCTTCCATATTTGCAAGAACATGTTTCATTCCATCAATCGATTATCTCTGGGTTTACCTGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063317.4 |
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