Pregenerated sensors for ADAM6A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043945Ensembl transcript IDs: ENSMUST00000053086.3
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGTCCCAGGCCATCCAGAACTGTaGACTGGAGTTCTACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: FSNATTSGGAESNTSYVPGHPEL*TGVLPC Trigger: ACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCC...TGGGACATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| 3UTR TCA 72 bp | TCAGGTGGTGCCGAGTCCAACACGTCTTATGTCCCATaGTATAAACAAAGGCCATCCAGAACTGTGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: SGGAESNTSYVP*YKQRPSRTVDW Trigger: CCAGTCCACAGTTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGGCACCACCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| 3UTR CCA 72 bp | ATGTCCCATGATATAAACAAAGGCCATCCAGAACTGTaGACTGGAGTTCTACCTTGTCCCCTAATGACATTC | + |
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Preference number: 3 (lower is better) Translates to: MSHDINKGHPEL*TGVLPCPLMTF Trigger: GAATGTCATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATATCATGGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| 3UTR CCA 72 bp | TTGAAAGATTTATTTCAGCAATGCAACAACATCAGGTaGTGCCGAGTCCAACACGTCTTATGTCCCATGATA | + |
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Preference number: 3 (lower is better) Translates to: LKDLFQQCNNIR*CRVQHVLCPMI Trigger: TATCATGGGACATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATCTTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | TTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGTCCCATTCTCCGCAGGTGGATaGTATGTCTCTGGCCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: FSNATTSGGAESNTSYVPFSAGG*YVSGPE Trigger: TTCGGGGCCAGAGACATATCATCCACCTGCGGAGAA...TGGGACATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR GCA 90 bp | CCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACTGGGGACCCACTGTCTATaGTCCCACTGTGTCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSPTRLMSHDINKGHPELGTHCL*SHCVPL Trigger: AAGAGGGACACAGTGGGAGCATAGACAGTGGGTCCC...CAGTTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGTCCCAAGATGTAACGCCAAGTaGGATGGCCTTGAGAACACC | + |
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Preference number: 4 (lower is better) Translates to: FSNATTSGGAESNTSYVPRCNAK*DGLENT Trigger: GGTGTTCTCAAGGCCATCCCACTTGGCGTTACATCT...TGGGACATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | GTGCCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAAAGTGTCTGGGCCAAATaGGTGTCTTTCTCCGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VPSPTRLMSHDINKGHPESVWAK*VSFSAG Trigger: ACCTGCGGAGAAAGACACTCATTTGGCCCAGACACT...TTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | CCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACTGGGTTATCCAACTTTATaGCCCCTGACAGGCCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSPTRLMSHDINKGHPELGYPTL*PLTGPH Trigger: ATGGGGGCCTGTCAGGGGTCATAAAGTTGGATAACC...CAGTTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | CCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACTGTTGAGAACACCAGACTaGAACCAGGAGGAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSPTRLMSHDINKGHPELLRTPD*NQEEQP Trigger: TGGCTGCTCCTCCTGGTTCCAGTCTGGTGTTCTCAA...CAGTTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | GTGCCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACAACTTTATGACCCCTaGCAGGCCCCCATAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: VPSPTRLMSHDINKGHPEQLYDP*QAPITS Trigger: ACTTGTTATGGGGGCCTGTCAGGGGTCATAAAGTTG...TTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTACAGGTGTTCCTTCTCTaGCAGATACAGTACCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLQVFLL*QIQYPS Trigger: TGAGGGGTACTGTATCTGCCAGAGAAGGAACACCTG...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTAGGGCTCCAACCAAAATaGCAATGGCAATTCCGACGA | + |
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Preference number: 4 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLGLQPK*QWQFRR Trigger: TCGTCGGAATTGCCATTGCCATTTTGGTTGGAGCCC...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGGCTCCTTGGTCATCTTaGGTTGTCAGCAACAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: FISAMQQHQVVPSPTRLMAPWSS*VVSNKC Trigger: ACACTTGTTGCTGACAACTCAAGATGACCAAGGAGC...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATCCACAGCAGGGATCTaGATAACATGCCTTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLSTAGI*ITCLLG Trigger: TCCCAAAAGGCATGTTATTCAGATCCCTGCTGTGGA...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR GCA 90 bp | GTGCCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACGAGAGCAGTCTTTGTaGTTGAAGTCCTTTGGTATG | + |
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Preference number: 4 (lower is better) Translates to: VPSPTRLMSHDINKGHPEREQSL*LKSFGM Trigger: CATACCAAAGGACTTCAAGCACAAAGACTGCTCTCG...TTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR GCA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGGGTTCTGTTTTATTATaGGCCTTTGAACCGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: FISAMQQHQVVPSPTRLMGSVLL*AFEPEG Trigger: CCCCTCCGGTTCAAAGGCGCATAATAAAACAGAACC...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGGGAGAACCTGTATTATaGCTCCAGTGCTTCCATGCA | + |
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Preference number: 4 (lower is better) Translates to: FISAMQQHQVVPSPTRLMGEPVL*LQCFHA Trigger: TGCATGGAAGCACTGGAGCCATAATACAGGTTCTCC...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGCGGTATACACAGTCATaGGAAAGACATAGTACCGCA | + |
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Preference number: 4 (lower is better) Translates to: FISAMQQHQVVPSPTRLMRYTQS*ERHSTA Trigger: TGCGGTACTATGTCTTTCTCATGACTGTGTATACCG...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTACTCTTCTTTGCACTTTaGAGGGCTCCAACCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLLFFAL*RAPTKM Trigger: CATTTTGGTTGGAGCCCTCCAAAGTGCAAAGAAGAG...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | TATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATACAGAATGGGTTGCTTaGAAGTGGCCTTTTATAGCA | + |
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Preference number: 4 (lower is better) Translates to: YKQRPSRTVDWSSTLSPNTEWVA*KWPFIA Trigger: TGCTATAAAAGGCCACTTTCAAGCAACCCATTCTGT...ATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR TCA 90 bp | GTGCCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAAATACTCAACAGTAGATaGAAGTTTGTCACCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VPSPTRLMSHDINKGHPEILNSR*KFVTSR Trigger: TCTGGAGGTGACAAACTTTCATCTACTGTTGAGTAT...TTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR GCA 90 bp | ATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATGGTTAATTATAGCTCCTaGATCAGGCCTAAAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: INKGHPELWTGVLPCPLMVNYSS*IRPKMS Trigger: GCTCATTTTAGGCCTGATGCAGGAGCTATAATTAAC...CATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATTATACTCCTCTCAGCTaGATTAACAGCATCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: YKQRPSRTVDWSSTLSPNYTPLS*INSIIS Trigger: GGAGATGATGCTGTTAATCCAGCTGAGAGGAGTATA...ATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATCAGATAAGTGTCATCTaGGCAAATGAACTTAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: YKQRPSRTVDWSSTLSPNQISVI*ANELRA Trigger: GGCTCTAAGTTCATTTGCCCAGATGACACTTATCTG...ATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | ATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATGCAACCAAAATGGCAATaGCAATTCCGACGATTGTTA | + |
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Preference number: 4 (lower is better) Translates to: INKGHPELWTGVLPCPLMQPKWQ*QFRRLL Trigger: TAACAATCGTCGGAATTGCCATTGCCATTTTGGTTG...CATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATGAAATTGCATTTTTCTaGGGTGCAGTCATAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: YKQRPSRTVDWSSTLSPNEIAFF*GAVITQ Trigger: TTGGGTTATGACTGCACCCCAGAAAAATGCAATTTC...ATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGGTCATAGAAAAGACATaGCATCAGATCAGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: FISAMQQHQVVPSPTRLMVIEKT*HQIRSI Trigger: AATACTCCTGATCTGATGCCATGTCTTTTCTATGAC...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CCA 90 bp | CCGAGTCCAACACGTCTTATGTCCCATGATATAAACAAAGGCCATCCAGAACTGATGTTCTTGCAAAAATaGAAGATTGGTGACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: PSPTRLMSHDINKGHPELMFLQK*KIGDIG Trigger: ACCAATGTCACCAATCTTCCATTTTTGCAAGAACAT...CAGTTCTGGATGGCCTTTGTTTATATCATGGGACATAAGACGTGTTGGACTCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR GCA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTAATATACAGAATGGGTTaGTTGAAAGTGGCCTTTTAT | + |
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Preference number: 4 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLIYRMG*LKVAFY Trigger: ATAAAAGGCCACTTTCAAGCAACCCATTCTGTATAT...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | ATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATGCACAGTGACCATGGATaGCAGGATCCCCTCCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: INKGHPELWTGVLPCPLMHSDHG*QDPLQV Trigger: TACCTGGAGGGGATCCTGCAATCCATGGTCACTGTG...CATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | TATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATCCAAGTGGGATGGCCTaGAGAACACCAGACTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: YKQRPSRTVDWSSTLSPNPSGMA*RTPDWN Trigger: GTTCCAGTCTGGTGTTCTCAAGGCCATCCCACTTGG...ATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CCA 90 bp | CCACTGTGTCCCTCTTCTTTGCACTTTGGAGGGCTCCAACCAAAATaGCAATGGCAATTCCGACGATTGTTACACACTCCTCTGAAATTG | + |
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Preference number: 5 (lower is better) Translates to: PLCPSSLHFGGLQPK*QWQFRRLLHTPLKL Trigger: CAATTTCAGAGGAGTGTGTAACAATCGTCGGAATTGCCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAAAGAAGAGGGACACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | TTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGTCCCAATACGAGAGCAGTCTTaGTGCTTGAAGTCCTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: FSNATTSGGAESNTSYVPIREQS*CLKSFG Trigger: ACCAAAGGACTTCAAGCACAAAGACTGCTCTCGTAT...TGGGACATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | GATTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTACTGTGTCCCTCTTCTTaGCACTTTGGAGGGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: DLFQQCNNIRWCRVQHVLLCPSS*HFGGLQ Trigger: TTGGAGCCCTCCAAAGTGCAAAGAAGAGGGACACAG...TAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CCA 90 bp | TGTCCCTCTTCTTTGCACTTTGGAGGGCTCCAACCAAAATGGCAATaGCAATTCCGACGATTGTTACACACTCCTCTGAAATTGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CPSSLHFGGLQPKWQ*QFRRLLHTPLKLHF Trigger: AAAATGCAATTTCAGAGGAGTGTGTAACAATCGTCGGAATTGCCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAAAGAAGAGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | TTTATTTCAGCAATGCAACAACATCAGGTGGTGCCGAGTCCAACACGTCTTATGTCTCCTGGCGAATTCTaGTTAATTATAGCTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: FISAMQQHQVVPSPTRLMSPGEF*LIIAPA Trigger: TGCAGGAGCTATAATTAACAAGAATTCGCCAGGAGA...CATAAGACGTGTTGGACTCGGCACCACCTGATGTTGTTGCATTGCTGAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS-3UTR CAA 90 bp | ATAAACAAAGGCCATCCAGAACTGTGGACTGGAGTTCTACCTTGTCCCCTAATGCAGTCACACTGCTCATaGTTATCTACTTTGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: INKGHPELWTGVLPCPLMQSHCS*LSTLKF Trigger: AAACTTCAAAGTAGATAACAATGAGCAGTGTGACTG...CATTAGGGGACAAGGTAGAACTCCAGTCCACAGTTCTGGATGGCCTTTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CCA 72 bp | GGAGCAGCCAGAGTGCAAATAGCAAGAGGAGGACCCTaGGGACCACAGGTCTTTCCACTAGCCTCATGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GAARVQIARGGP*GPQVFPLASCP Trigger: GGGGCATGAGGCTAGTGGAAAGACCTGTGGTCCCCAGGGTCCTCCTCTTGCTATTTGCACTCTGGCTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | TTATGCGCCTTTGAACCGGAGGGGACCCACTGTCTATaGTCCCACTGTGTCCCTCTTCTTTGCACTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCAFEPEGTHCL*SHCVPLLCTLE Trigger: CTCCAAAGTGCAAAGAAGAGGGACACAGTGGGAGCATAGACAGTGGGTCCCCTCCGGTTCAAAGGCGCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | ACCCACTGTCTATGCTCCCACTGTGTCCCTCTTCTTTaGACTTTGGAGGGCTCCAACCAAAATGGCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: THCLCSHCVPLL*TLEGSNQNGNG Trigger: GCCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAAAGAAGAGGGACACAGTGGGAGCATAGACAGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | GACCCACTGTCTATGCTCCCACTGTGTCCCTCTTCTTaGCACTTTGGAGGGCTCCAACCAAAATGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: DPLSMLPLCPSS*HFGGLQPKWQW Trigger: CCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAAAGAAGAGGGACACAGTGGGAGCATAGACAGTGGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | GCCCCGAAAACGCAAGCTATACGAGAGCAGTCTTTGTaGTTGAAGTCCTTTGGTATGGTAGATCTCCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: APKTQAIREQSL*LKSFGMVDLLP Trigger: CGGAAGGAGATCTACCATACCAAAGGACTTCAAGCACAAAGACTGCTCTCGTATAGCTTGCGTTTTCGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | GGAGGGAGAACCTGTATTATGGCTCCAGTGCTTCCATaGATTCATAGGCCCTGTGTCATCAGACTCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: GGRTCIMAPVLP*IHRPCVIRLRY Trigger: GTATCTGAGTCTGATGACACAGGGCCTATGAATGCATGGAAGCACTGGAGCCATAATACAGGTTCTCCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CCA 72 bp | GCATATTCCAATCTGGAGGAGGGAGAACCTGTATTATaGCTCCAGTGCTTCCATGCATTCATAGGCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: AYSNLEEGEPVL*LQCFHAFIGPV Trigger: CACAGGGCCTATGAATGCATGGAAGCACTGGAGCCATAATACAGGTTCTCCCTCCTCCAGATTGGAATATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | CTGGCCCCGAAAACGCAAGCTATACGAGAGCAGTCTTaGTGCTTGAAGTCCTTTGGTATGGTAGATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LAPKTQAIREQS*CLKSFGMVDLL Trigger: AAGGAGATCTACCATACCAAAGGACTTCAAGCACAAAGACTGCTCTCGTATAGCTTGCGTTTTCGGGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 90 bp | GATATGTCTCTGGCCCCGAAAACGCAAGCTATACGAGAGCAGTCTTaGTGCTTGAAGTCCTTTGGTATGGTAGATCTCCTTCCGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: DMSLAPKTQAIREQS*CLKSFGMVDLLPRN Trigger: ATTCCTCGGAAGGAGATCTACCATACCAAAGGACTTCAAGCACAAAGACTGCTCTCGTATAGCTTGCGTTTTCGGGGCCAGAGACATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 90 bp | GAGATAAACTTCCATTGCAAGCTCCTCGATCACAGAACTTACCCCTaGAACACGGGGTACCATGTCTCACCAATCCAGCATCTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: EINFHCKLLDHRTYP*NTGYHVSPIQHLLF Trigger: AAACAGCAGATGCTGGATTGGTGAGACATGGTACCCCGTGTTCAAGGGGTAAGTTCTGTGATCGAGGAGCTTGCAATGGAAGTTTATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS TCA 72 bp | TCACCTCCAGAAGCACTATATACAGAATGGGTTGCTTaGAAGTGGCCTTTTATAGCAGCTGGATGTGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: SPPEALYTEWVA*KWPFIAAGCVA Trigger: CGCTACACATCCAGCTGCTATAAAAGGCCACTTTCAAGCAACCCATTCTGTATATAGTGCTTCTGGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS TCA 72 bp | GGCAATGGCAATTCCGACGATTGTTACACACTCCTCTaGAATTGCATTTTTCTGGGGTGCAGTCATAACCCA | + |
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Preference number: 6 (lower is better) Translates to: GNGNSDDCYTLL*NCIFLGCSHNP Trigger: TGGGTTATGACTGCACCCCAGAAAAATGCAATTTCAGAGGAGTGTGTAACAATCGTCGGAATTGCCATTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | TTAAATACACTACTGGCTCTAGGTTCTGTTTTATTATaGGCCTTTGAACCGGAGGGGACCCACTGTCTATGC | + |
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Preference number: 6 (lower is better) Translates to: LNTLLALGSVLL*AFEPEGTHCLC Trigger: GCATAGACAGTGGGTCCCCTCCGGTTCAAAGGCGCATAATAAAACAGAACCTAGAGCCAGTAGTGTATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CCA 72 bp | TCTTTGCACTTTGGAGGGCTCCAACCAAAATGGCAATaGCAATTCCGACGATTGTTACACACTCCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLHFGGLQPKWQ*QFRRLLHTPLK Trigger: TTTCAGAGGAGTGTGTAACAATCGTCGGAATTGCCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | GTCACCTCCAGAAGCACTATATACAGAATGGGTTGCTaGAAAGTGGCCTTTTATAGCAGCTGGATGTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VTSRSTIYRMGC*KVAFYSSWMCS Trigger: GCTACACATCCAGCTGCTATAAAAGGCCACTTTCAAGCAACCCATTCTGTATATAGTGCTTCTGGAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | GTCTGCAGAGTGTCCCAGAAGGACTGTAAGTGCAATTaGCACAGCATAATTCTTTATCACAAATGCTACCAG | + |
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Preference number: 6 (lower is better) Translates to: VCRVSQKDCKCN*HSIILYHKCYQ Trigger: CTGGTAGCATTTGTGATAAAGAATTATGCTGTGCAAATTGCACTTACAGTCCTTCTGGGACACTCTGCAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS TCA 72 bp | CTTGTGAAAATGGATCAGCCTCGGTATACACAGTCATaGGAAAGACATAGTACCGCATATGAAGATTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LVKMDQPRYTQS*ERHSTAYEDWS Trigger: TGACCAATCTTCATATGCGGTACTATGTCTTTCTCATGACTGTGTATACCGAGGCTGATCCATTTTCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS TCA 72 bp | TCAAGCCCAAAGCAGGTAACCCCAGAGATAACCGATTaGTGGAATGAAACATGTTCTTGCAAAAATGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSPKQVTPEITD*WNETCSCKNGR Trigger: TCTTCCATTTTTGCAAGAACATGTTTCATTCCATCAATCGGTTATCTCTGGGGTTACCTGCTTTGGGCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS TCA 72 bp | AAAGCAGGTAACCCCAGAGATAACCGATTGATGGAATaGAACATGTTCTTGCAAAAATGGAAGATTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: KAGNPRDNRLME*NMFLQKWKIGD Trigger: GTCACCAATCTTCCATTTTTGCAAGAACATGTTTCATTCCATCAATCGGTTATCTCTGGGGTTACCTGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | ATCATCTCCTGGCGAATTCTTGTTAATTATAGCTCCTaGATCAGGCCTAAAATGAGCATAAAATACTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: IISWRILVNYSS*IRPKMSIKYSL Trigger: GAGAGAGTATTTTATGCTCATTTTAGGCCTGATGCAGGAGCTATAATTAACAAGAATTCGCCAGGAGATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | AAGTGCAATTTGCACAGCATAATTCTTTATCACAAATaGTACCAGGTGTTAACCTGCAATCATTTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: KCNLHSIILYHK*YQVLTCNHFHS Trigger: GCTGTGGAAATGATTGCAGGTTAACACCTGGTAGCATTTGTGATAAAGAATTATGCTGTGCAAATTGCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | AAAAGACATGGCATCAGATCAGGAGTATTAAGTATGTaGCTTATCTCTGCAAGGGAACAATTGCTGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KRHGIRSGVLSM*LISAREQLLKA Trigger: TGCTTTCAGCAATTGTTCCCTTGCAGAGATAAGCAACATACTTAATACTCCTGATCTGATGCCATGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS GCA 72 bp | ATAATTCTTTATCACAAATGCTACCAGGTGTTAACCTaGAATCATTTCCACAGCAGGGATCTGAATAACATG | + |
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Preference number: 6 (lower is better) Translates to: IILYHKCYQVLT*NHFHSRDLNNM Trigger: CATGTTATTCAGATCCCTGCTGTGGAAATGATTGCAGGTTAACACCTGGTAGCATTTGTGATAAAGAATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | TTCTTCTGCTCTAGTACAATGCCCAAATCGAAACCGTaGTTTGTTGATGTCATAGCACTTAATATTAGCATT | + |
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Preference number: 6 (lower is better) Translates to: FFCSSTMPKSKP*FVDVIALNISI Trigger: AATGCTAATATTAAGTGCTATGACATCAACAAACAACGGTTTCGATTTGGGCATTGTACTAGAGCAGAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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| CDS CAA 72 bp | ATGACTTTAAACAAATACTCAACAGTAGATGAAAGTTaGTCACCTCCAGAAGCACTATATACAGAATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: MTLNKYSTVDES*SPPEALYTEWV Trigger: AACCCATTCTGTATATAGTGCTTCTGGAGGTGACAAACTTTCATCTACTGTTGAGTATTTGTTTAAAGTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053086.3 |
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