Pregenerated sensors for ADAM34L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050190Ensembl transcript IDs: ENSMUST00000056023.5
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTCGAGACATATATGGTCTGGAGCACAAGGTGTGCCATCGCTCACTaGTCCAACGTCATCTATGGTGATCCCAAAATGATAGTCCATCGT | + |
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Preference number: 5 (lower is better) Translates to: VETYMVWSTRCAIAH*SNVIYGDPKMIVHR Trigger: ACGATGGACTATCATTTTGGGATCACCATAGATGACGTTGGAGCAGTGAGCGATGGCACACCTTGTGCTCCAGACCATATATGTCTCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 90 bp | TATGGCATAAGTGTGGTGTACAGTTACTTACCAGAACAGACTTGCTaGCACACTTTCTGTCGAGACATATATGGTCTGGAGCACAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: YGISVVYSYLPEQTC*HTFCRDIYGLEHKV Trigger: CACCTTGTGCTCCAGACCATATATGTCTCGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTACACCACACTTATGCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 90 bp | AAAGCGGTCACCACGTCTGTTCATTTCCATGTAGCAAATTTCATCTaGACTTCTACTTCTCTTGCCAAAAATCTCCCGACACTGCCTATC | + |
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Preference number: 5 (lower is better) Translates to: KAVTTSVHFHVANFI*TSTSLAKNLPTLPI Trigger: GATAGGCAGTGTCGGGAGATTTTTGGCAAGAGAAGTAGAAGTGCAGATGAAATTTGCTACATGGAAATGAACAGACGTGGTGACCGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 90 bp | TGTCACTACTTCTGGAAGGCTACTGTACTTAGCATGTCCAATTGGTaGATATGCAGAGAAGAAGAACATTGTCCACAGGCAGAACTTAAG | + |
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Preference number: 5 (lower is better) Translates to: CHYFWKATVLSMSNW*ICREEEHCPQAELK Trigger: CTTAAGTTCTGCCTGTGGACAATGTTCTTCTTCTCTGCATATTCACCAATTGGACATGCTAAGTACAGTAGCCTTCCAGAAGTAGTGACA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 90 bp | TATCATGTCGTTGACATTCCATTTTATAGCAATAACCACCACGACTaGAACGGATTCCATCTGCTTTATACACATCTCCTGGACACTCAC | + |
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Preference number: 5 (lower is better) Translates to: YHVVDIPFYSNNHHD*NGFHLLYTHLLDTH Trigger: GTGAGTGTCCAGGAGATGTGTATAAAGCAGATGGAATCCGTTGCAGTCGTGGTGGTTATTGCTATAAAATGGAATGTCAACGACATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 90 bp | TGTTCATTTCCATGTAGCAAATTTCATCTGCACTTCTACTTCTCTTaGCAAAAATCTCCCGACACTGCCTATCATGTCGTTGACATTCCA | + |
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Preference number: 5 (lower is better) Translates to: CSFPCSKFHLHFYFS*QKSPDTAYHVVDIP Trigger: TGGAATGTCAACGACATGATAGGCAGTGTCGGGAGATTTTTGGCAAGAGAAGTAGAAGTGCAGATGAAATTTGCTACATGGAAATGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 72 bp | GGTCCACTGTCTATACTACCTCCATGGCCATGTAGTTaGCAGTCCGGTGGTTCCCATGTGTTAGTACAATGG | + |
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Preference number: 6 (lower is better) Translates to: GPLSILPPWPCS*QSGGSHVLVQW Trigger: CCATTGTACTAACACATGGGAACCACCGGACTGTCAACTACATGGCCATGGAGGTAGTATAGACAGTGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 72 bp | TATATGGTCTGGAGCACAAGGTGTGCCATCGCTCACTaGTCCAACGTCATCTATGGTGATCCCAAAATGATA | + |
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Preference number: 6 (lower is better) Translates to: YMVWSTRCAIAH*SNVIYGDPKMI Trigger: TATCATTTTGGGATCACCATAGATGACGTTGGAGCAGTGAGCGATGGCACACCTTGTGCTCCAGACCATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CCA 72 bp | GGGTCCACCAATTCTCATAGGGGATTTGCAAAAGAGTaGAGGCATTGCTTTCCTGAAGGTTCATTTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSTNSHRGFAKE*RHCFPEGSFVV Trigger: CACAACAAATGAACCTTCAGGAAAGCAATGCCTCCACTCTTTTGCAAATCCCCTATGAGAATTGGTGGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 72 bp | AAACCTGTGATGGGTCCACCAATTCTCATAGGGGATTaGCAAAAGAGTGGAGGCATTGCTTTCCTGAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: KPVMGPPILIGD*QKSGGIAFLKV Trigger: AACCTTCAGGAAAGCAATGCCTCCACTCTTTTGCAAATCCCCTATGAGAATTGGTGGACCCATCACAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 72 bp | GTACATGCACTTCCATCATGCTTCATGCCCAAGTTATaGCCCATCTCATGTGCTACGATGAATGCCAGATAT | + |
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Preference number: 6 (lower is better) Translates to: VHALPSCFMPKL*PISCATMNARY Trigger: ATATCTGGCATTCATCGTAGCACATGAGATGGGTCATAACTTGGGCATGAAGCATGATGGAAGTGCATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 72 bp | AGTGTGGTGTACAGTTACTTACCAGAACAGACTTGCTaGCACACTTTCTGTCGAGACATATATGGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SVVYSYLPEQTC*HTFCRDIYGLE Trigger: CTCCAGACCATATATGTCTCGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTACACCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CCA 72 bp | ACTGCTCTCCTTCTTCAACCAAGTTATTGCCACACATaGTCGGCACCAGTGTTATTGTTTTTAGTGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: TALLLQPSYCHT*SAPVLLFLVHL Trigger: CAGATGCACTAAAAACAATAACACTGGTGCCGACCATGTGTGGCAATAACTTGGTTGAAGAAGGAGAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 90 bp | TGCATATGGCATAAGTGTGGTGTACAGTTACTTACCAGAACAGACTaGCTGACACACTTTCTGTCGAGACATATATGGTCTGGAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: CIWHKCGVQLLTRTD*LTHFLSRHIWSGAQ Trigger: TTGTGCTCCAGACCATATATGTCTCGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTACACCACACTTATGCCATATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 72 bp | CCATGTAGCAAATTTCATCTGCACTTCTACTTCTCTTaGCAAAAATCTCCCGACACTGCCTATCATGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PCSKFHLHFYFS*QKSPDTAYHVV Trigger: AACGACATGATAGGCAGTGTCGGGAGATTTTTGGCAAGAGAAGTAGAAGTGCAGATGAAATTTGCTACATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CCA 72 bp | TGGCAGTGGTGTTTATTGTTGCAGACTCCTTGCATATaGCATAAGTGTGGTGTACAGTTACTTACCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: WQWCLLLQTPCI*HKCGVQLLTRT Trigger: TGTTCTGGTAAGTAACTGTACACCACACTTATGCCATATGCAAGGAGTCTGCAACAATAAACACCACTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS TCA 72 bp | CAAAATGATAGTCCATCGTCCAGCAGGTGTTATTACTaGAGTGAGTATAATGCACTGTCTCATGGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QNDSPSSSRCYY*SEYNALSHGFS Trigger: GGAGAAACCATGAGACAGTGCATTATACTCACTTCAGTAATAACACCTGCTGGACGATGGACTATCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS GCA 72 bp | GTTGACATTCCATTTTATAGCAATAACCACCACGACTaGAACGGATTCCATCTGCTTTATACACATCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VDIPFYSNNHHD*NGFHLLYTHLL Trigger: CAGGAGATGTGTATAAAGCAGATGGAATCCGTTGCAGTCGTGGTGGTTATTGCTATAAAATGGAATGTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 72 bp | CCAAGTTATTGCCACACATGGTCGGCACCAGTGTTATaGTTTTTAGTGCATCTGGAATATTGTACAAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: PSYCHTWSAPVL*FLVHLEYCTSN Trigger: GTTGCTTGTACAATATTCCAGATGCACTAAAAACAATAACACTGGTGCCGACCATGTGTGGCAATAACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 72 bp | CATAAGTGTGGTGTACAGTTACTTACCAGAACAGACTaGCTGACACACTTTCTGTCGAGACATATATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: HKCGVQLLTRTD*LTHFLSRHIWS Trigger: AGACCATATATGTCTCGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTACACCACACTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 90 bp | CTTCTTCAACCAAGTTATTGCCACACATGGTCGGCACCAGTGTTATaGTTTTTAGTGCATCTGGAATATTGTACAAGCAACTTCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLQPSYCHTWSAPVL*FLVHLEYCTSNFFC Trigger: ACAGAAGAAGTTGCTTGTACAATATTCCAGATGCACTAAAAACAATAACACTGGTGCCGACCATGTGTGGCAATAACTTGGTTGAAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 90 bp | CCAAGCACATACATAATTATAAAAGCTAGGAAGTACATACTCCAATaGGAAGGAGATAAAGGCACTGGAGGTGGTCCACTGTCTATACTA | + |
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Preference number: 6 (lower is better) Translates to: PSTYIIIKARKYILQ*EGDKGTGGGPLSIL Trigger: TAGTATAGACAGTGGACCACCTCCAGTGCCTTTATCTCCTTCCAATTGGAGTATGTACTTCCTAGCTTTTATAATTATGTATGTGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 90 bp | CACATGGTCGGCACCAGTGTTATTGTTTTTAGTGCATCTGGAATATaGTACAAGCAACTTCTTCTGTTGACAACTGAAAACATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HMVGTSVIVFSASGI*YKQLLLLTTENISS Trigger: TGAAGAAATGTTTTCAGTTGTCAACAGAAGAAGTTGCTTGTACAATATTCCAGATGCACTAAAAACAATAACACTGGTGCCGACCATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 72 bp | CTGACAAAAAGGTGTATGATATCATGTCTAACACGATaGCCAATCGCATTTTTCTTCCAACTACAGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LTKRCMISCLTR*PIAFFFQLQNA Trigger: TGCATTCTGTAGTTGGAAGAAAAATGCGATTGGCAATCGTGTTAGACATGATATCATACACCTTTTTGTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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| CDS CAA 72 bp | GGCACCAGTGTTATTGTTTTTAGTGCATCTGGAATATaGTACAAGCAACTTCTTCTGTTGACAACTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: GTSVIVFSASGI*YKQLLLLTTEN Trigger: GTTTTCAGTTGTCAACAGAAGAAGTTGCTTGTACAATATTCCAGATGCACTAAAAACAATAACACTGGTGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056023.5 |
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