Pregenerated sensors for ADAM32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037437Ensembl transcript IDs: ENSMUST00000119720.8, ENSMUST00000121438.9, ENSMUST00000140573.8, ENSMUST00000173069.8, ENSMUST00000173559.2, ENSMUST00000174059.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGACCAAGGGAAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTaGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: VTKGRTWTLHFSVSP*VPSSFSSSSSPSSS Trigger: AGAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTTCCCTTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 ENSMUST00000173069.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCTTCACCAACTGTAGGAATCTTATTCTTATCTGACCACAACTCCAATGAGAACACGATAGTAACCTaGAGTTGGGCAAACACTGAA | + |
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Preference number: 3 (lower is better) Translates to: SASPTVGILFLSDHNSNENTIVT*SWANTE Trigger: TTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTT...CTCATTGGAGTTGTGGTCAGATAAGAATAAGATTCCTACAGTTGGTGAAGCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
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| CDS-3UTR TCA 90 bp | GTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTTCCACCCTGTGCCTATaGGGAACACTGAAGCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSPWVPSSFSSSSSPSSSSTLCL*GTLKRG Trigger: TCCTCGCTTCAGTGTTCCTCATAGGCACAGGGTGGA...AGAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCGTCCAGAGCATGTGCTaGGGGTGGCGACTGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLVQSMC*GWRLSS Trigger: CGAACTCAGTCGCCACCCTCAGCACATGCTCTGGAC...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCATTTCCGCAGACCGCTaGTGCAGTCCTTTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSISADR*CSPLHL Trigger: CAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAAT...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCATCACCCTCCACCTTaGCATTTCCGCAGACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLHHPPP*HFRRPL Trigger: CAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATG...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCATCAGGCCCACATTCTaGTTCAGAGCCACAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLIRPTF*FRATVT Trigger: TGTGACTGTGGCTCTGAAGCAGAATGTGGGCCTGAT...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTGCTGTCTTCTGATTTaGTTTCCGTTCCCGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLCCLLI*FPFPWH Trigger: GTGCCACGGGAACGGAAAGCAAATCAGAAGACAGCA...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCGTCCAGAGCATGTGCTaGGGGTGGCGACTGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLVQSMC*GWRLSS Trigger: CGAACTCAGTCGCCACCCTCAGCACATGCTCTGGAC...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTGGGCAGATCGTGCTTaGCAGACCACAGCGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSWADRA*QTTAML Trigger: CAGCATCGCTGTGGTCTGGCAAGCACGATCTGCCCA...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
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| CDS-3UTR CCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTGCTTTCGCTACTCATaGACTCCTCTTCCTTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLCFRYS*TPLPWN Trigger: GTTCCAAGGAAGAGGAGTCCATGAGTAGCGAAAGCA...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121438.9 ENSMUST00000173559.2 |
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| CDS-3UTR TCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCAGTGGCAGACACCATaGGAATTGCACACTCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLQWQTP*ELHTPF Trigger: GAACGGAGTGTGCAATTCTCATGGTGTCTGCCACTG...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCCAGAAGTTGATCTGCTaGCATACGTGTAAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSQKLIC*HTCKCC Trigger: ACAGCACTTACACGTATGTCAGCAGATCAACTTCTG...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121438.9 ENSMUST00000140573.8 ENSMUST00000173069.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCTTGACAGTTGGGAGGTaGGTAGCCGGCATTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLLTVGR*VAGIAV Trigger: CACTGCAATGCCGGCTACTCACCTCCCAACTGTCAA...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCGTAAGTGCTGTCTTCTaGTTTGCTTTCGCTACTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSVSAVF*FAFATH Trigger: ATGAGTAGCGAAAGCAAATCAGAAGACAGCACTTAC...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121438.9 ENSMUST00000173559.2 |
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| CDS-3UTR TCA 90 bp | GTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTGTAAGTGCTGTCTTCTaGTTTGCTTTCGCTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPWVPSSFSSSSSPSSSVSAVF*FAFATH Trigger: ATGAGTAGCGAAAGCAAATCAGAAGACAGCACTTAC...AGAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121438.9 ENSMUST00000173559.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTATCTTTTCTGGAGGTaGACAGTGTACTGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLYLFWR*TVYCFL Trigger: CAAGAAGCAGTACACTGTGCACCTCCAGAAAAGATA...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCATCAGGCCCACATTCTaGTTCAGAGCCACAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLIRPTF*FRATVT Trigger: TGTGACTGTGGCTCTGAAGCAGAATGTGGGCCTGAT...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCGTCACAAGCTCTTCCTaGTTTCAGAACACATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLVTSSS*FQNTSV Trigger: AACAGATGTGTTCTGAAAGCAGGAAGAGCTTGTGAC...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | GTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTTGTTTCGGTTGTCTTTaGCACAGTTGCCAAACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPWVPSSFSSSSSPSSSCFGCL*HSCQTY Trigger: ATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACA...AGAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCTGCTGTCTTCTGATTTaGTTTCCGTTCCCGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLCCLLI*FPFPWH Trigger: GTGCCACGGGAACGGAAAGCAAATCAGAAGACAGCA...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
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| CDS-3UTR CCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCTGCTTTCCGTTCCCGTaGCACTTGGATGAACACGTT | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLCFPFP*HLDEHV Trigger: AACGTGTTCATCCAAGTGCCACGGGAACGGAAAGCA...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCGTGTTGAGATGTAAATaGAGATTGCAGAGGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLVLRCK*RLQRLN Trigger: ATTGAGCCTCTGCAATCTGCATTTACATCTCAACAC...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCATTTCCGCAGACCGCTaGTGCAGTCCTTTGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLISADR*CSPLHL Trigger: CAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAAT...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTTCCTGAGCTCCCATTaGAGACTTCAGGAATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSFLSSH*RLQECH Trigger: GTGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAA...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
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| CDS-3UTR CCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCCTGAGCCGGAATGTTTaGAGAATGAAAACTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSLSRNV*RMKTCR Trigger: TCTACAAGTTTTCATTCTCCAAACATTCCGGCTCAG...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR CCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCAGTCCTTTGCATCTGTaGCTTATTCTGCAGACATTT | + |
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Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSSPLHL*LILQTF Trigger: AAATGTCTGCAGAATAAGCCACAGATGCAAAGGACT...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR CCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTGCTTTCCGTTCCCGTaGCACTTGGATGAACACGTT | + |
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Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSCFPFP*HLDEHV Trigger: AACGTGTTCATCCAAGTGCCACGGGAACGGAAAGCA...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
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| CDS-3UTR TCA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCAGTTCGGGTAGCCTTTaGTGTGTCCTTGATAATAGC | + |
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Preference number: 4 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSSSGSL*CVLDNS Trigger: GCTATTATCAAGGACACATCAAAGGCTACCCGAACT...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCCAGAAGTTGATCTGCTaGCATACGTGTAAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSQKLIC*HTCKCC Trigger: ACAGCACTTACACGTATGTCAGCAGATCAACTTCTG...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121438.9 ENSMUST00000140573.8 ENSMUST00000173069.8 |
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| CDS-3UTR TCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCGTAAGTGCTGTCTTCTaGTTTGCTTTCCGTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSVSAVF*FAFRSR Trigger: ACGGGAACGGAAAGCAAATCAGAAGACAGCACTTAC...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
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| CDS-3UTR GCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCGACACATTCTCAAACTaGAGGAACCCTCTCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSDTFSN*RNPLSP Trigger: TGGACTGAGAGGGTTCCTGCAGTTTGAGAATGTGTC...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCAGTTCGGGTAGCCTTTaGTGTGTCCTTGATAATAGC | + |
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Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSSSGSL*CVLDNS Trigger: GCTATTATCAAGGACACATCAAAGGCTACCCGAACT...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCGTAAGTGCTGTCTTCTaGTTTGCTTCTGCTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSVSAVF*FASAPY Trigger: ATATGGAGCAGAAGCAAATCAGAAGACAGCACTTAC...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140573.8 |
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| CDS-3UTR GCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCATCTGTGGCTTATTCTaGAGACATTTGGCACCCTCG | + |
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Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLICGLF*RHLAPS Trigger: CGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGAT...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTCATCACCCTCCACCTTaGCATTTCCGCAGACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSHHPPP*HFRRPL Trigger: CAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATG...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCAAAATTGACAATTTTTaGAGCATGTTGATGAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLKIDNF*SMLMRE Trigger: CTCCCTCATCAACATGCTGCAAAAATTGTCAATTTT...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR CCA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTGCTCCCATGTAATTTaGGTACTCGTTATAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSCSHVI*VLVINE Trigger: TTCATTTATAACGAGTACCCAAATTACATGGGAGCA...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | GGTCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGAGGTGGACAATTTCCTaGGCTCCCATTGCAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: GPLLVYWLLLAVTKGRTWRWTIS*APIADF Trigger: GAAGTCTGCAATGGGAGCTCAGGAAATTGTCCACCT...CCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCAGAAGTTGATCTGCTaGCATACGTGTAAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLQKLIC*HTCKCC Trigger: ACAGCACTTACACGTATGTCAGCAGATCAACTTCTG...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121438.9 ENSMUST00000140573.8 ENSMUST00000173069.8 |
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| CDS-3UTR GCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCGTGTTGAGATGTAAATaGAGATTGCAGAGGCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLVLRCK*RLQRLN Trigger: ATTGAGCCTCTGCAATCTGCATTTACATCTCAACAC...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR CCA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCCTGAGCCGGAATGTTTaGAGAATGAAAACTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSLSRNV*RMKTCR Trigger: TCTACAAGTTTTCATTCTCCAAACATTCCGGCTCAG...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS-3UTR TCA 90 bp | CCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTAGGTGGACAATTTCCTaGGCTCCCATTGCAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: PLLVYWLLLAVTKGRTWTRWTIS*APIADF Trigger: GAAGTCTGCAATGGGAGCTCAGGAAATTGTCCACCT...AGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
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| CDS-3UTR GCA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCAGGTGCACAGTGTACTaGTTCTTGTTTATTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLRCTVY*FLFIGI Trigger: TATTCCAATAAACAAGAAGCAGTACACTGTGCACCT...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGTTCCTGAGCTCCCATTaGAGACTTCAGGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPLLVYWLLLAVTKGRTWFLSSH*RLQECH Trigger: GTGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAA...CCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCTGTTTCGGTTGTCTTTaGCACAGTTGCCAAACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLCFGCL*HSCQTY Trigger: ATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACA...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR GCA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCTGCTGTCTTCTGATTTaGTTTCGCTACTCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLCCLLI*FRYSWT Trigger: AGTCCATGAGTAGCGAAAGCAAATCAGAAGACAGCA...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCAGTCCTTTGCATCTGTaGCTTATTCTGCAGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSSPLHL*LILQTF Trigger: AAATGTCTGCAGAATAAGCCACAGATGCAAAGGACT...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCAGCCACTTCTTTTCTTaGTTCTTAGATGCTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSSHFFS*FLDALS Trigger: GGAAAGAGCATCTAAGAACCAAGAAAAGAAGTGGCT...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | CCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTTGGACTCCTCTTCCTTaGAACCGCACTGTTTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLVYWLLLAVTKGRTWTWTPLP*NRTVSS Trigger: GCTTGAAACAGTGCGGTTCCAAGGAAGAGGAGTCCA...AGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS-3UTR TCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCGAACACGTTTTTGATTaGTCCCTAAGAAATCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSEHVFD*SLRNLD Trigger: ATCGAGATTTCTTAGGGATCAATCAAAAACGTGTTC...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACGACACATTCTCAAACTaGAGGAACCCTCTCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STFGLLAPFSCDQGKNVDDTFSN*RNPLSP Trigger: TGGACTGAGAGGGTTCCTGCAGTTTGAGAATGTGTC...GTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR GCA 90 bp | TCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACATCTGTGGCTTATTCTaGAGACATTTGGCACCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STFGLLAPFSCDQGKNVDICGLF*RHLAPS Trigger: CGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGAT...GTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR GCA 90 bp | CCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTTTCCTGAGCTCCCATTaGAGACTTCAGGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLVYWLLLAVTKGRTWTFLSSH*RLQECH Trigger: GTGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAA...AGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTGTAAGTGCTGTCTTCTaGTTTGCTTTCCGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVYWLLLAVTKGRTWTLVSAVF*FAFRSR Trigger: ACGGGAACGGAAAGCAAATCAGAAGACAGCACTTAC...AAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGTATCTTTTCTGGAGGTaGACAGTGTACTGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLLVYWLLLAVTKGRTWYLFWR*TVYCFL Trigger: CAAGAAGCAGTACACTGTGCACCTCCAGAAAAGATA...CCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTGCTCCCATGTAATTTaGGTACTCGTTATAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSCSHVI*VLVINE Trigger: TTCATTTATAACGAGTACCCAAATTACATGGGAGCA...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTCTGAGCCCCAGCATTTaGGTGAGAATAACCGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLVYWLLLAVTKGRTWTLLSPSI*VRITEK Trigger: CTTTTCGGTTATTCTCACCCAAATGCTGGGGCTCAG...AAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTCTGAGCCCCAGCATTTaGGTGAGAATAACCGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSLSPSI*VRITEK Trigger: CTTTTCGGTTATTCTCACCCAAATGCTGGGGCTCAG...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTGCTTTCGCTACTCATaGACTCCTCTTCCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSCFRYS*TPLPWN Trigger: GTTCCAAGGAAGAGGAGTCCATGAGTAGCGAAAGCA...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTAATGAACTCACCTGCTaGCATACGTGTAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSNELTC*HTCKCC Trigger: ACAGCACTTACACGTATGTCAGCAGGTGAGTTCATT...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119720.8 |
||
| CDS-3UTR GCA 90 bp | AACTCCAATGAGGACAACACGATAGTAACCTTGAGTTGGGCAAACACTGAATTTGACACATTCTCAAACTaGAGGAACCCTCTCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSNEDNTIVTLSWANTEFDTFSN*RNPLSP Trigger: TGGACTGAGAGGGTTCCTGCAGTTTGAGAATGTGTC...AAATTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTTGTCCTCATTGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTCACCAACTGTAGGAATCTTATTCTTATCTGACCACAACTCCAATGAGAGTTCGGGTAGCCTTTaGTGTGTCCTTGATAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SASPTVGILFLSDHNSNESSGSL*CVLDNS Trigger: GCTATTATCAAGGACACATCAAAGGCTACCCGAACT...CTCATTGGAGTTGTGGTCAGATAAGAATAAGATTCCTACAGTTGGTGAAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR TCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTGAACACGTTTTTGATTaGTCCCTAAGAAATCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSEHVFD*SLRNLD Trigger: ATCGAGATTTCTTAGGGATCAATCAAAAACGTGTTC...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTAGGTGCACAGTGTACTaGTTCTTGTTTATTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LLVYWLLLAVTKGRTWTLRCTVY*FLFIGI Trigger: TATTCCAATAAACAAGAAGCAGTACACTGTGCACCT...AAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR GCA 90 bp | TTACAATATTGCTGTCAGAGCCCAAGTAATCATACAGCGCTTTGTCCACCACAAGTGTTGAGATGTAAATaGAGATTGCAGAGGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQYCCQSPSNHTALCPPQVLRCK*RLQRLN Trigger: ATTGAGCCTCTGCAATCTGCATTTACATCTCAACAC...TTGTGGTGGACAAAGCGCTGTATGATTACTTGGGCTCTGACAGCAATATTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTATCTGACCACAACTCCAATGAGGACAACACGATAGTAACCTTGAGTTGGAGGTGCACAGTGTACTaGTTCTTGTTTATTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FLSDHNSNEDNTIVTLSWRCTVY*FLFIGI Trigger: TATTCCAATAAACAAGAAGCAGTACACTGTGCACCT...CCAACTCAAGGTTACTATCGTGTTGTCCTCATTGGAGTTGTGGTCAGATAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTAAAATTGACAATTTTTaGAGCATGTTGATGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSKIDNF*SMLMRE Trigger: CTCCCTCATCAACATGCTGCAAAAATTGTCAATTTT...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTCACCAACTGTAGGAATCTTATTCTTATCTGACCACAACTCCAATGAGCTGAGCCGGAATGTTTaGAGAATGAAAACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SASPTVGILFLSDHNSNELSRNV*RMKTCR Trigger: TCTACAAGTTTTCATTCTCCAAACATTCCGGCTCAG...CTCATTGGAGTTGTGGTCAGATAAGAATAAGATTCCTACAGTTGGTGAAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| 3UTR CAA 72 bp | GACCACAACTCCAATGAGGACAACACGATAGTAACCTaGAGTTGGGCAAACACTGAATTTATAAGACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: DHNSNEDNTIVT*SWANTEFIRLI Trigger: TATCAGTCTTATAAATTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTTGTCCTCATTGGAGTTGTGGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCAGAAGTTGATCGGCTGAAAGTTATGATGTTCATTTTCAACATGTCTCTTTGCTGTCTTCTGATTTaGTTTCGCTACTCATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSEVDRLKVMMFIFNMSLCCLLI*FRYSWT Trigger: AGTCCATGAGTAGCGAAAGCAAATCAGAAGACAGCA...AAGAGACATGTTGAAAATGAACATCATAACTTTCAGCCGATCAACTTCTGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173559.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCATCACCCTCCACCTaGCCATTTCCGCAGACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSSSPST*PFPQTA Trigger: AGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGA...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCCGCTGCTGCAGTCCTTaGCATCTGTGGCTTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLRCCSP*HLWLIL Trigger: CAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCG...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCGCCTTTGATGTGTCCTaGATAATAGCACTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSAFDVS*IIALSR Trigger: CCGGCTCAGTGCTATTATCAAGGACACATCAAAGGC...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCAACCTGCTCCATATATaGACTCGCACACCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSNLLHI*TRTPCP Trigger: TGGACAGGGTGTGCGAGTCAATATATGGAGCAGGTT...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCGTGCTGTCTTCTGATTaGCTTTCGCTACTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLVLSSD*LSLLMD Trigger: GTCCATGAGTAGCGAAAGCAAATCAGAAGACAGCAC...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121438.9 ENSMUST00000173559.2 |
||
| CDS GCA 90 bp | TCACCCTCCACCTTGCCATTTCCGCAGACCGCTGCTGCAGTCCTTTaGATCTGTGGCTTATTCTGCAGACATTTGGCACCCTCGTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSTLPFPQTAAAVL*ICGLFCRHLAPSFD Trigger: ATCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCAGATGTAAATGCAGATaGCAGAGGCTCAATTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SEPLGAIFLLLLLLPFFLRCKCR*QRLNSV Trigger: TACGGAATTGAGCCTCTGCAATCTGCATTTACATCT...GAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCCGCTGCTGCAGTCCTTaGCATCTGTGGCTTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSRCCSP*HLWLIL Trigger: CAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCG...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | GTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCCGTTCCCGTGGCACTaGGATGAACACGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VDSSFLSEPLGAIFLLLLPFPWH*DEHVFD Trigger: ATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGG...GAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCGTGCTGTCTTCTGATTaGCTTCTGCTCCATATATTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSVLSSD*LLLHIL Trigger: CAATATATGGAGCAGAAGCAAATCAGAAGACAGCAC...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140573.8 |
||
| CDS GCA 90 bp | ATTCTGCTTCAGAGCCACAGTCACAAATTTCATCACCCTCCACCTTaGCATTTCCGCAGACCGCTGCTGCAGTCCTTTGCATCTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQSHSHKFHHPPP*HFRRPLLQSFASVA Trigger: AGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAAATTTGTGACTGTGGCTCTGAAGCAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 90 bp | ACAAATTTCATCACCCTCCACCTTGCCATTTCCGCAGACCGCTGCTaGAGTCCTTTGCATCTGTGGCTTATTCTGCAGACATTTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TNFITLHLAISADRC*SPLHLWLILQTFGT Trigger: GGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAAATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 90 bp | GTCACAAATTTCATCACCCTCCACCTTGCCATTTCCGCAGACCGCTaGTGCAGTCCTTTGCATCTGTGGCTTATTCTGCAGACATTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTNFITLHLAISADR*CSPLHLWLILQTFG Trigger: GCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAAATTTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTCTTCATTCAAACTGCAATaGCTAAATGACTTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSPWVPSSFSSSSSPSSSSFKLQ*LNDFTP Trigger: AGGTGTGAAGTCATTTAGCAATTGCAGTTTGAATGA...AGAGGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | CCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTTCATCACCCTCCACCTaGCCATTTCCGCAGACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLLVYWLLLAVTKGRTWTSSPST*PFPQTA Trigger: AGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGA...AGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCTCCTCCTCCCCTTCTTCCTTGCAAACATGCCCATaGTTTATAGTTACATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSPWVPSSFSSSSSPSSLQTCP*FIVTSG Trigger: ACCTGATGTAACTATAAACAATGGGCATGTTTGCAA...GGAAGAAGGGGAGGAGGAGGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCTTTCCTGAGCTCCCATaGCAGACTTCAGGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLFPELP*QTSGMS Trigger: TGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAAA...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
||
| CDS-3UTR CAA 90 bp | ACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCTCCAATTTTTGCAGCATGTaGATGAGGGAGACTTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TWTLHFSVSPWVPSSFSSNFCSM*MRETYC Trigger: ACAGTAAGTCTCCCTCATCAACATGCTGCAAAAATT...GGAGGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AAGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCAGATGTAAATGCAGATaGCAGAGGCTCAATTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNVDSSFLSEPLGAIFLLRCKCR*QRLNSV Trigger: TACGGAATTGAGCCTCTGCAATCTGCATTTACATCT...GAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGTTTCCTGAGCTCCCATaGCAGACTTCAGGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLLVYWLLLAVTKGRTWFPELP*QTSGMS Trigger: TGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAAA...CCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
||
| CDS-3UTR CAA 90 bp | CCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTAACCTGCTCCATATATaGACTCGCACACCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLVYWLLLAVTKGRTWTNLLHI*TRTPCP Trigger: TGGACAGGGTGTGCGAGTCAATATATGGAGCAGGTT...AGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | AGAACGTGGACTCTTCATTTCTCAGTGAGCCCCTGGGTGCCATCTTCCTTCTCCAAGCCACTTCTTTTCTaGGTTCTTAGATGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTWTLHFSVSPWVPSSFSKPLLF*VLRCSF Trigger: GAAAGAGCATCTAAGAACCAAGAAAAGAAGTGGCTT...GGAGAAGGAAGATGGCACCCAGGGGCTCACTGAGAAATGAAGAGTCCACGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS TCA 90 bp | TTGCACACTCCGTTCCCGTGGCACTTGGATGAACACGTTTTTGATTaGTCCCTAAGAAATCTCGATTCTACGCACACGCCATTTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHTPFPWHLDEHVFD*SLRNLDSTHTPFKQ Trigger: CTGCTTAAATGGCGTGTGCGTAGAATCGAGATTTCTTAGGGATCAATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGGAGTGTGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS GCA 90 bp | TTTCCGCAGACCGCTGCTGCAGTCCTTTGCATCTGTGGCTTATTCTaGAGACATTTGGCACCCTCGTTCGATTTAAAATGTTCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPQTAAAVLCICGLF*RHLAPSFDLKCSKS Trigger: TGACTTTGAACATTTTAAATCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTCCGTTCCCGTGGCACTaGGATGAACACGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVYWLLLAVTKGRTWTLPFPWH*DEHVFD Trigger: ATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGG...AAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTCCGTTCCCGTGGCACTaGGATGAACACGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSPFPWH*DEHVFD Trigger: ATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGG...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTCTTCTGCTCCATATATaGACTCGCACACCCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSLLLHI*TRTPCP Trigger: TGGACAGGGTGTGCGAGTCAATATATGGAGCAGAAG...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140573.8 |
||
| CDS TCA 90 bp | ATTTGCTTTCCGTTCCCGTGGCACTTGGATGAACACGTTTTTGATTaGTCCCTAAGAAATCTCGATTCTACGCACACGCCATTTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICFPFPWHLDEHVFD*SLRNLDSTHTPFKQ Trigger: CTGCTTAAATGGCGTGTGCGTAGAATCGAGATTTCTTAGGGATCAATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGGAAAGCAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000173069.8 |
||
| CDS GCA 90 bp | TCCATCCACAGAACACATATCTGTTTCGGTTGTCTTTGCCACAGTTaGCAAACCTATCATTTTGGCCCTGGATTTCTTCATAGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SIHRTHICFGCLCHS*QTYHFGPGFLHSRQ Trigger: TTGCCTGCTATGAAGAAATCCAGGGCCAAAATGATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACAGATATGTGTTCTGTGGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CCA 90 bp | GCAGATCCTATCAAGATCACATGTAGCACCATTAGCAACCCTGAGTaGATCTTCTTTGACACTCGATCCAAAGTCCACAGTTATACACAC | + |
|
Preference number: 5 (lower is better) Translates to: ADPIKITCSTISNPE*IFFDTRSKVHSYTH Trigger: GTGTGTATAACTGTGGACTTTGGATCGAGTGTCAAAGAAGATCCACTCAGGGTTGCTAATGGTGCTACATGTGATCTTGATAGGATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCAATGAGGACAACACGATAGTAACCTTGAGTTGGGCAAACACTGAATTTGCCTTTGATGTGTCCTaGATAATAGCACTGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: NSNEDNTIVTLSWANTEFAFDVS*IIALSR Trigger: CCGGCTCAGTGCTATTATCAAGGACACATCAAAGGC...AAATTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTTGTCCTCATTGGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS-3UTR CAA 90 bp | TCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACAACACGATAGTAACCTaGAGTTGGGCAAACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: STFGLLAPFSCDQGKNVDNTIVT*SWANTE Trigger: TTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTT...GTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGAATTTTTGCAGCATGTaGATGAGGGAGACTTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPLLVYWLLLAVTKGRTWNFCSM*MRETYC Trigger: ACAGTAAGTCTCCCTCATCAACATGCTGCAAAAATT...CCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTAACACGATAGTAACCTaGAGTTGGGCAAACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLVYWLLLAVTKGRTWTLNTIVT*SWANTE Trigger: TTCAGTGTTTGCCCAACTCAAGGTTACTATCGTGTT...AAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | TCCACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCATTCAAACTGCAATaGCTAAATGACTTCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: STFGLLAPFSCDQGKNVDSFKLQ*LNDFTP Trigger: AGGTGTGAAGTCATTTAGCAATTGCAGTTTGAATGA...GTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGATCGGCTGAAAGTTATGATGTTCATTTTCAACATGTCTCTTCACACCGTGCTGTCTTCTGATTaGCTTTCGCTACTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EVDRLKVMMFIFNMSLHTVLSSD*LSLLMD Trigger: GTCCATGAGTAGCGAAAGCAAATCAGAAGACAGCAC...GGTGTGAAGAGACATGTTGAAAATGAACATCATAACTTTCAGCCGATCAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173559.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTTGGTTTATTGGCTCCTTTTAGCTGTGACCAAGGGAAGAACGTGGACTCTTTGCAAACATGCCCATaGTTTATAGTTACATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TFGLLAPFSCDQGKNVDSLQTCP*FIVTSG Trigger: ACCTGATGTAACTATAAACAATGGGCATGTTTGCAA...AGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACCAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
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| CDS CCA 90 bp | AGGATAATTAAGACAATGTACAAACTTAAAAGCCACTTCTTTTCTTaGTTCTTAGATGCTCTTTCCATGGGCAGATCGTGCTTGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RIIKTMYKLKSHFFS*FLDALSMGRSCLPD Trigger: GTCTGGCAAGCACGATCTGCCCATGGAAAGAGCATCTAAGAACCAAGAAAAGAAGTGGCTTTTAAGTTTGTACATTGTCTTAATTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS-3UTR CAA 90 bp | TCATCTGCTTCACCAACTGTAGGAATCTTATTCTTATCTGACCACAACTCCAATAGATGTAAATGCAGATaGCAGAGGCTCAATTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSASPTVGILFLSDHNSNRCKCR*QRLNSV Trigger: TACGGAATTGAGCCTCTGCAATCTGCATTTACATCT...ATTGGAGTTGTGGTCAGATAAGAATAAGATTCCTACAGTTGGTGAAGCAGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174059.2 |
||
| CDS CCA 90 bp | GTAGCCTTTGATGTGTCCTTGATAATAGCACTGAGCCGGAATGTTTaGAGAATGAAAACTTGTAGATCCTTGATTATACATATAAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VAFDVSLIIALSRNV*RMKTCRSLIIHINH Trigger: ATGGTTTATATGTATAATCAAGGATCTACAAGTTTTCATTCTCCAAACATTCCGGCTCAGTGCTATTATCAAGGACACATCAAAGGCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000174059.2 |
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| CDS CAA 90 bp | ATCACCCTCCACCTTGCCATTTCCGCAGACCGCTGCTGCAGTCCTTaGCATCTGTGGCTTATTCTGCAGACATTTGGCACCCTCGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: ITLHLAISADRCCSP*HLWLILQTFGTLVR Trigger: TCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 72 bp | ACCTTGCCATTTCCGCAGACCGCTGCTGCAGTCCTTTaGATCTGTGGCTTATTCTGCAGACATTTGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: TLPFPQTAAAVL*ICGLFCRHLAP Trigger: GGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 72 bp | TTCATCACCCTCCACCTTGCCATTTCCGCAGACCGCTaGTGCAGTCCTTTGCATCTGTGGCTTATTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FITLHLAISADR*CSPLHLWLILQ Trigger: CTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 72 bp | CAGAGCCACAGTCACAAATTTCATCACCCTCCACCTTaGCATTTCCGCAGACCGCTGCTGCAGTCCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSHSHKFHHPPP*HFRRPLLQSFA Trigger: TGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAAATTTGTGACTGTGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | CACCTTGCCATTTCCGCAGACCGCTGCTGCAGTCCTTaGCATCTGTGGCTTATTCTGCAGACATTTGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: HLAISADRCCSP*HLWLILQTFGT Trigger: GGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | TCAGAGCCACAGTCACAAATTTCATCACCCTCCACCTaGCCATTTCCGCAGACCGCTGCTGCAGTCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEPQSQISSPST*PFPQTAAAVLC Trigger: GCAAAGGACTGCAGCAGCGGTCTGCGGAAATGGCAAGGTGGAGGGTGATGAAATTTGTGACTGTGGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | AGGCAAATGGAGCATTCACTGAACCTGCTCCATATATaGACTCGCACACCCTGTCCAGGTCCGGACAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RQMEHSLNLLHI*TRTPCPGPDSL Trigger: GAGACTGTCCGGACCTGGACAGGGTGTGCGAGTCAATATATGGAGCAGGTTCAGTGAATGCTCCATTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS TCA 72 bp | AAGTGCTGTCTTCTGATTTGCTTCTGCTCCATATATTaGCTCGCACACCCTGTCCAGGTCCGGACAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KCCLLICFCSIY*LAHPVQVRTVS Trigger: GGAGACTGTCCGGACCTGGACAGGGTGTGCGAGTCAATATATGGAGCAGAAGCAAATCAGAAGACAGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140573.8 |
||
| CDS CCA 72 bp | CTGATTTGCTTTCGCTACTCATGGACTCCTCTTCCTTaGAACCGCACTGTTTCAAGCCTTTCCACCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LICFRYSWTPLP*NRTVSSLSTLC Trigger: GCACAGGGTGGAAAGGCTTGAAACAGTGCGGTTCCAAGGAAGAGGAGTCCATGAGTAGCGAAAGCAAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | TCTGATTTGCTTTCGCTACTCATGGACTCCTCTTCCTaGGAACCGCACTGTTTCAAGCCTTTCCACCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SDLLSLLMDSSS*EPHCFKPFHPV Trigger: CACAGGGTGGAAAGGCTTGAAACAGTGCGGTTCCAAGGAAGAGGAGTCCATGAGTAGCGAAAGCAAATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121438.9 |
||
| CDS CAA 90 bp | CTTCATAGCAGGCAAATGGAGCATTCACTGAACCTGCTCCATATATaGACTCGCACACCCTGTCCAGGTCCGGACAGTCTCCATTATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LHSRQMEHSLNLLHI*TRTPCPGPDSLHYN Trigger: GTTATAATGGAGACTGTCCGGACCTGGACAGGGTGTGCGAGTCAATATATGGAGCAGGTTCAGTGAATGCTCCATTTGCCTGCTATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS TCA 72 bp | ACTTCACACCTCCATATTGCATCGCCCTGGGATTCATaGTGCAGATGGATTCCGAGCAGTAGCATTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSHLHIASPWDS*CRWIPSSSISQ Trigger: CTGAGAAATGCTACTGCTCGGAATCCATCTGCATCATGAATCCCAGGGCGATGCAATATGGAGGTGTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS TCA 72 bp | CCGTTCCCGTGGCACTTGGATGAACACGTTTTTGATTaGTCCCTAAGAAATCTCGATTCTACGCACACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PFPWHLDEHVFD*SLRNLDSTHTP Trigger: TGGCGTGTGCGTAGAATCGAGATTTCTTAGGGATCAATCAAAAACGTGTTCATCCAAGTGCCACGGGAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS GCA 72 bp | ACCGCTGCTGCAGTCCTTTGCATCTGTGGCTTATTCTaGAGACATTTGGCACCCTCGTTCGATTTAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: TAAAVLCICGLF*RHLAPSFDLKC Trigger: ACATTTTAAATCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS GCA 72 bp | TCTGTTAGGTTCACAACAGCTATCAGGCCCACATTCTaGTTCAGAGCCACAGTCACAAATTTCATCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVRFTTAIRPTF*FRATVTNFITL Trigger: GAGGGTGATGAAATTTGTGACTGTGGCTCTGAAGCAGAATGTGGGCCTGATAGCTGTTGTGAACCTAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | TCGGTTGTCTTTGCCACAGTTGCCAAACCTATCATTTaGGCCCTGGATTTCTTCATAGCAGGCAAATGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVVFATVAKPII*ALDFFIAGKWS Trigger: GCTCCATTTGCCTGCTATGAAGAAATCCAGGGCCAAAATGATAGGTTTGGCAACTGTGGCAAAGACAACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 72 bp | CTCCATCCACAGAACACATATCTGTTTCGGTTGTCTTaGCCACAGTTGCCAAACCTATCATTTTGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LHPQNTYLFRLS*PQLPNLSFWPW Trigger: CCAGGGCCAAAATGATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACAGATATGTGTTCTGTGGATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 90 bp | ACCGCTGCTGCAGTCCTTTGCATCTGTGGCTTATTCTGCAGACATTaGGCACCCTCGTTCGATTTAAAATGTTCAAAGTCATTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAVLCICGLFCRH*APSFDLKCSKSFKL Trigger: CAGTTTGAATGACTTTGAACATTTTAAATCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGCAGCAGCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CAA 90 bp | CCACATATGAGATTCCTCCATCCACAGAACACATATCTGTTTCGGTaGTCTTTGCCACAGTTGCCAAACCTATCATTTTGGCCCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: PHMRFLHPQNTYLFR*SLPQLPNLSFWPWI Trigger: AATCCAGGGCCAAAATGATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACAGATATGTGTTCTGTGGATGGAGGAATCTCATATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
||
| CDS CCA 72 bp | ATCAAGATCACATGTAGCACCATTAGCAACCCTGAGTaGATCTTCTTTGACACTCGATCCAAAGTCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: IKITCSTISNPE*IFFDTRSKVHS Trigger: ACTGTGGACTTTGGATCGAGTGTCAAAGAAGATCCACTCAGGGTTGCTAATGGTGCTACATGTGATCTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000173069.8 |
||
| CDS CAA 90 bp | ATGAGATTCCTCCATCCACAGAACACATATCTGTTTCGGTTGTCTTaGCCACAGTTGCCAAACCTATCATTTTGGCCCTGGATTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MRFLHPQNTYLFRLS*PQLPNLSFWPWISS Trigger: TGAAGAAATCCAGGGCCAAAATGATAGGTTTGGCAACTGTGGCAAAGACAACCGAAACAGATATGTGTTCTGTGGATGGAGGAATCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS TCA 72 bp | CCCATTGTTTATAGTTACATCAGGTGGACAATTTCCTaGGCTCCCATTGCAGACTTCAGGAATGTCACAGTA | + |
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Preference number: 6 (lower is better) Translates to: PIVYSYIRWTIS*APIADFRNVTV Trigger: TACTGTGACATTCCTGAAGTCTGCAATGGGAGCTCAGGAAATTGTCCACCTGATGTAACTATAAACAATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000140573.8 |
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| CDS CCA 72 bp | AAAAGCATAGATCACAGAAGCTGTACTGTTATTGGGTaGGTTGTAAGGCATTCGGGTAGGGTACGTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: KSIDHRSCTVIG*VVRHSGRVRTN Trigger: ATTTGTACGTACCCTACCCGAATGCCTTACAACCCACCCAATAACAGTACAGCTTCTGTGATCTATGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS CAA 72 bp | GCAGTCCTTTGCATCTGTGGCTTATTCTGCAGACATTaGGCACCCTCGTTCGATTTAAAATGTTCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVLCICGLFCRH*APSFDLKCSKS Trigger: TGACTTTGAACATTTTAAATCGAACGAGGGTGCCAAATGTCTGCAGAATAAGCCACAGATGCAAAGGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 |
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| CDS TCA 72 bp | TGTCTCTTCACACCGTCTTTTAATGAACTCACCTGCTaGCATACGTGTAAGTGCTGTCTTCTGATTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: CLFTPSFNELTC*HTCKCCLLICF Trigger: AAAGCAAATCAGAAGACAGCACTTACACGTATGTCAGCAGGTGAGTTCATTAAAAGACGGTGTGAAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119720.8 |
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| CDS CCA 72 bp | GATGTGTCCTTGATAATAGCACTGAGCCGGAATGTTTaGAGAATGAAAACTTGTAGATCCTTGATTATACAT | + |
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Preference number: 6 (lower is better) Translates to: DVSLIIALSRNV*RMKTCRSLIIH Trigger: ATGTATAATCAAGGATCTACAAGTTTTCATTCTCCAAACATTCCGGCTCAGTGCTATTATCAAGGACACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119720.8 ENSMUST00000121438.9 ENSMUST00000174059.2 |
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