Pregenerated sensors for ADAM30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043468Ensembl transcript IDs: ENSMUST00000050342.5, ENSMUST00000198363.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAGTCACCTCCCTCGCTTGTCCATTGGCTTAATAAAGAACTGGTaGACAACAGCTAGGCAGAAAGGGGAAGGCAGAGCTTCTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: NSHLPRLSIGLIKNW*TTARQKGEGRASEL Trigger: CAGTTCAGAAGCTCTGCCTTCCCCTTTCTGCCTAGCTGTTGTCCACCAGTTCTTTATTAAGCCAATGGACAAGCGAGGGAGGTGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 90 bp | ATAAGGATCCCAAGCAAGATCTATAGATTGTTGGGATGCACTGTGTaGAGGTTGTCTCTGTATATCCAACCATTGACTGCTGTACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: IRIPSKIYRLLGCTV*RLSLYIQPLTAVPA Trigger: TGCTGGTACAGCAGTCAATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGATCTTGCTTGGGATCCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR GCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTaGATAAACAGTCACCTCCCTCGCTTGTCCATTGGCTTAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: RAENCYSYGFSPALY*INSHLPRLSIGLIK Trigger: CTTTATTAAGCCAATGGACAAGCGAGGGAGGTGACTGTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 90 bp | CAGAAAGTCCCACTACAATGTATTGCAGATAGTAGGACTTTAACATaGGCCATGAATACAAAAATGCCACTCCAAGTGCCAAAGTCACCC | + |
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Preference number: 1 (lower is better) Translates to: QKVPLQCIADSRTLT*AMNTKMPLQVPKSP Trigger: GGGTGACTTTGGCACTTGGAGTGGCATTTTTGTATTCATGGCTCATGTTAAAGTCCTACTATCTGCAATACATTGTAGTGGGACTTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCGCATGTGGCAGGTCGTaGGCTAGGATAGTCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLACGRS*ARIVNS Trigger: GCTATTGACTATCCTAGCCCACGACCTGCCACATGC...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR GCA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATAAATGCCACTCCAAGTaGCAAAGTCACCCCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SIDCWDALCEGCLCISNHKCHSK*QSHPCV Trigger: CACACAGGGGTGACTTTGGCACTTGGAGTGGCATTT...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCGTACCAGCAGAGAGCTaGGAACTGTTATTCTTATGG | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLVPAES*ELLFLW Trigger: CCATAAGAATAACAGTTCTCAGCTCTCTGCTGGTAC...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCTGTATATCCAACCATTaGCTGCTGTACCAGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLCISNH*LLYQQR Trigger: TCTCTGCTGGTACAGCAGTCAATGGTTGGATATACA...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCTTGGGATGCACTGTGTaGAGGTTGTCTCTGTATATC | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLLGCTV*RLSLYI Trigger: GATATACAGAGACAACCTTCACACAGTGCATCCCAA...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCGTGTCATCATTTAACTaGAGGATCCAGAAAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLVSSFN*RIQKVP Trigger: TGGGACTTTCTGGATCCTCCAGTTAAATGATGACAC...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACGGCTTAATAAAGAACTaGTGGACAACAGCTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RAENCYSYGFSPALYCINGLIKN*WTTARQ Trigger: CTGCCTAGCTGTTGTCCACCAGTTCTTTATTAAGCC...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACCCCTCGCTTGTCCATTaGCTTAATAAAGAACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RAENCYSYGFSPALYCINPSLVH*LNKELV Trigger: CACCAGTTCTTTATTAAGCCAATGGACAAGCGAGGG...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCAGATCTATAGATTGTTaGGATGCACTGTGTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLRSIDC*DALCEG Trigger: ACCTTCACACAGTGCATCCCAACAATCTATAGATCT...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACATTTACTTTACATCCTaGTCACAATTCCCTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: RAENCYSYGFSPALYCINIYFTS*SQFPLP Trigger: AGGGAGAGGGAATTGTGATCAGGATGTAAAGTAAAT...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACAAAGTCACCCCTGTGTaGATACAAAACAAAGGGATT | + |
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Preference number: 2 (lower is better) Translates to: RAENCYSYGFSPALYCINKVTPV*IQNKGI Trigger: AATCCCTTTGTTTTGTATTCACACAGGGGTGACTTT...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCTTAATAAAGAACTGGTaGACAACAGCTAGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LSLRKKPRNCISDKQGNLLIKNW*TTARQK Trigger: TTTCTGCCTAGCTGTTGTCCACCAGTTCTTTATTAA...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR CCA 72 bp | CACCTCCCTCGCTTGTCCATTGGCTTAATAAAGAACTaGTGGACAACAGCTAGGCAGAAAGGGGAAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: HLPRLSIGLIKN*WTTARQKGEGR Trigger: TCTGCCTTCCCCTTTCTGCCTAGCTGTTGTCCACCAGTTCTTTATTAAGCCAATGGACAAGCGAGGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 72 bp | CAGCTAGGCAGAAAGGGGAAGGCAGAGCTTCTGAACTaGGATAGGGTCTCTGGGAGAAAACCATTAGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: QLGRKGKAELLN*DRVSGRKPLEA Trigger: TGCTTCTAATGGTTTTCTCCCAGAGACCCTATCTCAGTTCAGAAGCTCTGCCTTCCCCTTTCTGCCTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 72 bp | GCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATTaGCTGCTGTACCAGCAGAGAGCTGAGAACTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: ALCEGCLCISNH*LLYQQRAENCY Trigger: ATAACAGTTCTCAGCTCTCTGCTGGTACAGCAGTCAATGGTTGGATATACAGAGACAACCTTCACACAGTGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR GCA 72 bp | AACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTaGATAAACAGTCACCTCCCTCGCTTGTCCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: NCYSYGFSPALY*INSHLPRLSIG Trigger: GCCAATGGACAAGCGAGGGAGGTGACTGTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 72 bp | TATATCCAACCATTGACTGCTGTACCAGCAGAGAGCTaGGAACTGTTATTCTTATGGCTTCTCACCTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: YIQPLTAVPAES*ELLFLWLLTCL Trigger: AAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCTCTGCTGGTACAGCAGTCAATGGTTGGATATA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR TCA 72 bp | CCAAGCAAGATCTATAGATTGTTGGGATGCACTGTGTaGAGGTTGTCTCTGTATATCCAACCATTGACTGCT | + |
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Preference number: 3 (lower is better) Translates to: PSKIYRLLGCTV*RLSLYIQPLTA Trigger: AGCAGTCAATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGATCTTGCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| 3UTR GCA 72 bp | TGTGTGAAGGTTGTCTCTGTATATCCAACCATTGACTaGTGTACCAGCAGAGAGCTGAGAACTGTTATTCTT | + |
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Preference number: 3 (lower is better) Translates to: CVKVVSVYPTID*CTSRELRTVIL Trigger: AAGAATAACAGTTCTCAGCTCTCTGCTGGTACAGCAGTCAATGGTTGGATATACAGAGACAACCTTCACACA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTCCAGGTCAAAGACCATaGCCAGTTCCAGGTACCTTT | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRPGQRP*PVPGTF Trigger: AAAGGTACCTGGAACTGGTCATGGTCTTTGACCTGG...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR GCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTAAGATAGACTGGCACTaGAGGTACCTGGATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRKIDWH*RYLDLH Trigger: ATGCAGATCCAGGTACCTGCAGTGCCAGTCTATCTT...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTTCAAGCGCTTTCAGTTaGATCTTCAAGCTGACATCC | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRSSAFS*IFKLTS Trigger: GGATGTCAGCTTGAAGATTCAACTGAAAGCGCTTGA...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTCGATTTGGTAGTATCTaGAGTCAATGTTCAGTACGC | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRRFGSI*SQCSVR Trigger: GCGTACTGAACATTGACTCCAGATACTACCAAATCG...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTCCTACACACATATCCTaGTGGAAGGAAGTTACATTT | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRPTHIS*WKEVTF Trigger: AAATGTAACTTCCTTCCATCAGGATATGTGTGTAGG...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR GCA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTAATTCTTTCTATTGTTaGAAACACCTCGGCTATTGC | + |
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Preference number: 4 (lower is better) Translates to: RWPDVSRRREVTRHVAGRNSFYC*KHLGYC Trigger: GCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATT...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATAACAGCCAGCGGTGCTaGGGCAGGAAGGCCCACACT | + |
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Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNNSQRC*GRKAHT Trigger: AGTGTGGGCCTTCCTGCCCCAGCACCGCTGGCTGTT...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACGTAGATTCGGATTCCTaGGAGCCTTCCACGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: RAENCYSYGFSPALYCINVDSDS*EPSTEP Trigger: GGGCTCCGTGGAAGGCTCTCAGGAATCCGAATCTAC...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCTACGTCCTGTCCCCATaGTGCAGCTCTTCCTACCTC | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLYVLSP*CSSSYL Trigger: GAGGTAGGAAGAGCTGCATCATGGGGACAGGACGTA...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCGACTGCCCTCTTGAGTaGAGGAGAAAACTGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLDCPLE*RRKLAD Trigger: ATCTGCCAGTTTTCTCCTTCACTCAAGAGGGCAGTC...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCATCAGACTGCCCTCTTaGGTGAAGGAGAAAACTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLIRLPS*VKEKTG Trigger: GCCAGTTTTCTCCTTCACTCAAGAGGGCAGTCTGAT...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACTCCGCGGGAAGCCGGTaGTGCATTGAGTTTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: RAENCYSYGFSPALYCINSAGSR*CIEFLL Trigger: CAAAAGAAACTCAATGCATCACCGGCTTCCCGCGGA...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCGCCCAGAGGAGCAGTTaGCACCTTCTTTCCATTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLAQRSS*HLLSIY Trigger: GTAAATGGAAAGAAGGTGTCAACTGCTCCTCTGGGC...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATATCTGGACAGACACCTaGGGTCCCATCACAGTACTC | + |
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Preference number: 4 (lower is better) Translates to: SIDCWDALCEGCLCISNHIWTDT*GPITVL Trigger: GAGTACTGTGATGGGACCTCAGGTGTCTGTCCAGAT...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACGAGGAAGCTGCTTGCTaGTCCAGCATGGAATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RAENCYSYGFSPALYCINEEAAC*SSMEFF Trigger: GAAGAATTCCATGCTGGATCAGCAAGCAGCTTCCTC...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCCTCGCAATATATAAATaGAACCAGTCCGCGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLLAIYK*NQSAGS Trigger: GCTTCCCGCGGACTGGTTCCATTTATATATTGCGAG...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATGTAGGTGTCTGCAATTaGAGCCAAAAGAATGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: SIDCWDALCEGCLCISNHVGVCN*SQKNGV Trigger: GACGCCATTCTTTTGGCTTCAATTGCAGACACCTAC...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCAGGAAGTTACATTTATaGCAGCAAAGCCCAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLRKLHL*QQSPEE Trigger: CTCCTCTGGGCTTTGCTGTCATAAATGTAACTTCCT...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATTTGTGCCCCAGCAAATaGGATTATCTCCCCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SIDCWDALCEGCLCISNHLCPSK*DYLPSD Trigger: ATCTGAGGGGAGATAATCTCATTTGCTGGGGCACAA...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR GCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACGAACTGTCTACACCCTaGGCCCCTTTCTTAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RAENCYSYGFSPALYCINELSTP*APFLKL Trigger: AAGCTTTAAGAAAGGGGCGCAGGGTGTAGACAGTTC...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCCCCATGGGGTATCATaGTTCCATGATAGCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNPHGVS*FHDSLC Trigger: GCACAAGCTATCATGGAACCATGATACCCCATGGGG...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCAAGCCGGTGATGCATTaGGTTTCTTTTGTAATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLKPVMH*VSFVMH Trigger: GTGCATTACAAAAGAAACTCAATGCATCACCGGCTT...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR TCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATGGGTTCCCAGCCATATaGGCAATGGCAATTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNGFPAI*AMAILS Trigger: AGAAAGAATTGCCATTGCTCATATGGCTGGGAACCC...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR GCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATTCTTCCTCGGCTGTTTaGCCACCTGTTTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNSSSAV*PPVSSS Trigger: TGATGAAGAAACAGGTGGGCAAACAGCCGAGGAAGA...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATAATGGTGATTTCATATaGGTCAAAGCCCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNNGDFI*VKAPVR Trigger: CCTGACTGGGGCTTTGACTCATATGAAATCACCATT...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR TCA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATTTCCTACCTCTACACTaGCAGAATTCCTCATCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SIDCWDALCEGCLCISNHFLPLH*QNSSSC Trigger: ACATGATGAGGAATTCTGTCAGTGTAGAGGTAGGAA...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR CCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTTGCTGATCCAGCATaGAATTCTTCACAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNLADPA*NSSQAL Trigger: AAGAGCCTGTGAAGAATTCCATGCTGGATCAGCAAG...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATGTTGAATCTTCAAGCTaGCATCCTGAAAGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNVESSS*HPESRC Trigger: ACACCTACTTTCAGGATGTCAGCTTGAAGATTCAAC...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACTCTTCCCCAGGACCATaGATTAGCATCTATATATCT | + |
|
Preference number: 4 (lower is better) Translates to: RAENCYSYGFSPALYCINSSPGP*ISIYIS Trigger: AGATATATAGATGCTAATGCATGGTCCTGGGGAAGA...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCCAGCCATATGAGCAATaGCAATTCTTTCTATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLRKKPRNCISDKQGNLQPYEQ*QFFLLL Trigger: CAACAATAGAAAGAATTGCCATTGCTCATATGGCTG...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATTTACTTTGGGAATGGTaGTTTCATATGAGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSLRKKPRNCISDKQGNLLWEW*FHMSQS Trigger: GCTTTGACTCATATGAAATCACCATTCCCAAAGTAA...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTTATCAGACTGCCCTCTaGAGTGAAGGAGAAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPDVSRRREVTRHVAGRYQTAL*SEGENW Trigger: CCAGTTTTCTCCTTCACTCAAGAGGGCAGTCTGATA...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR CAA 90 bp | CGGTGGCCAGATGTGAGCAGACGCAGAGAGGTAACTAGGCATGTGGCAGGTCGTGAGAGGGCTTTAACATaGATACACTGTAGCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RWPDVSRRREVTRHVAGRERALT*IHCSLP Trigger: TGGCAGGCTACAGTGTATCAATGTTAAAGCCCTCTC...ACGACCTGCCACATGCCTAGTTACCTCTCTGCGTCTGCTCACATCTGGCCACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | CCTGTACGTCCTGTCCCCATGATGCAGCTCTTCCTACCTCTACACTaGCAGAATTCCTCATCATGTATCATCCCCACACAATGGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PVRPVPMMQLFLPLH*QNSSSCIIPTQWPN Trigger: ATTGGGCCATTGTGTGGGGATGATACATGATGAGGAATTCTGTCAGTGTAGAGGTAGGAAGAGCTGCATCATGGGGACAGGACGTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS GCA 90 bp | GGTACCTGGATCTGCATCCCTTACGGAAACAAAAGCCTCCGTTTCTaGATGGAGTTCCATCCTGCTTGTAAGAGTCATCTGGACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTWICIPYGNKSLRF*MEFHPACKSHLDRH Trigger: GTGTCTGTCCAGATGACTCTTACAAGCAGGATGGAACTCCATGCAGAAACGGAGGCTTTTGTTTCCGTAAGGGATGCAGATCCAGGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CCA 90 bp | GGATTCCTGAGAGCCTTCCACGGAGCCCACGTAATTACACTGGTCTaGTATATGCGGATAATCCTCTATCAGACTGCCCTCTTGAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GFLRAFHGAHVITLV*YMRIILYQTALLSE Trigger: TTCACTCAAGAGGGCAGTCTGATAGAGGATTATCCGCATATACCAGACCAGTGTAATTACGTGGGCTCCGTGGAAGGCTCTCAGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | ATGGAAGGAAGTTACATTTATGACAGCAAAGCCCAGAGGAGCAGTTaGCACCTTCTTTCCATTTACAGTCCGGCCCACAGCACAGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MEGSYIYDSKAQRSS*HLLSIYSPAHSTGL Trigger: AAGACCTGTGCTGTGGGCCGGACTGTAAATGGAAAGAAGGTGTCAACTGCTCCTCTGGGCTTTGCTGTCATAAATGTAACTTCCTTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | ACATATTGCCACGGGCAAACACGAATCTATCCAGGTCAAAGACCATaGCCAGTTCCAGGTACCTTTGGTGCTTGTAGGACTGATGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TYCHGQTRIYPGQRP*PVPGTFGACRTDEN Trigger: GTTTTCATCAGTCCTACAAGCACCAAAGGTACCTGGAACTGGTCATGGTCTTTGACCTGGATAGATTCGTGTTTGCCCGTGGCAATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS TCA 90 bp | CCCACCGTATCCTACCTCTACACAAAATGGGGGTTCCCAGCCATATaGGCAATGGCAATTCTTTCTATTGTTGCAAACACCTCGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: PTVSYLYTKWGFPAI*AMAILSIVANTSAI Trigger: AATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGAACCCCCATTTTGTGTAGAGGTAGGATACGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | CAGAATTCCTCATCATGTATCATCCCCACACAATGGCCCAATTCATaGGCAGTCCAAGTAGCAGGCCCAAGGATATTAACATTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSCIIPTQWPNS*AVQVAGPRILTLRK Trigger: CTTCCTCAATGTTAATATCCTTGGGCCTGCTACTTGGACTGCTCATGAATTGGGCCATTGTGTGGGGATGATACATGATGAGGAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCCAGTTCCAGGTACCTTaGGTGCTTGTAGGACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLRKKPRNCISDKQGNLQFQVP*VLVGLM Trigger: CATCAGTCCTACAAGCACCAAAGGTACCTGGAACTG...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | CAGTTGAATCTTCAAGCTGACATCCTGAAAGTAGGTGTCTGCAATTaGAGCCAAAAGAATGGCGTCATCCACCATCCTAGACATATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLNLQADILKVGVCN*SQKNGVIHHPRHIA Trigger: GGCAATATGTCTAGGATGGTGGATGACGCCATTCTTTTGGCTTCAATTGCAGACACCTACTTTCAGGATGTCAGCTTGAAGATTCAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS GCA 90 bp | ATGGGGGTTCCCAGCCATATGAGCAATGGCAATTCTTTCTATTGTTaGAAACACCTCGGCTATTGCACTTGTCAGGTAAACAGTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: MGVPSHMSNGNSFYC*KHLGYCTCQVNSQT Trigger: AGTTTGACTGTTTACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGAACCCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 90 bp | TTAACATTGATACACTGTAGCCTGCCACAGATTGTGTTGCCTCTATaGCACCTTGTATATCGGGTAGCATTTACAATGCCACAGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTLIHCSLPQIVLPL*HLVYRVAFTMPQFP Trigger: TGGGAACTGTGGCATTGTAAATGCTACCCGATATACAAGGTGTCATAGAGGCAACACAATCTGTGGCAGGCTACAGTGTATCAATGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATCCTCGGCTATTGCACTaGTCAGGTAAACAGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SIDCWDALCEGCLCISNHPRLLH*SGKQSN Trigger: GTTTGACTGTTTACCTGACAAGTGCAATAGCCGAGG...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS GCA 90 bp | ATGAGCAATGGCAATTCTTTCTATTGTTGCAAACACCTCGGCTATTaGACTTGTCAGGTAAACAGTCAAACTTCAGGTTGGTGTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MSNGNSFYCCKHLGY*TCQVNSQTSGWCSP Trigger: TGGACTACACCAACCTGAAGTTTGACTGTTTACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCCAGCACAGGTCTTTTTaGCAGTCTTCTTTAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLRKKPRNCISDKQGNLQHRSF*QSSLEP Trigger: TGGTTCTAAAGAAGACTGCAAAAAAGACCTGTGCTG...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATAGCCCAGAGGAGCAGTaGACACCTTCTTTCCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLSLRKKPRNCISDKQGNSPEEQ*TPSFHL Trigger: TAAATGGAAAGAAGGTGTCAACTGCTCCTCTGGGCT...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS TCA 90 bp | TATAGTATGTCCAGACTTCAAGCGCTTTCAGTTGAATCTTCAAGCTaGCATCCTGAAAGTAGGTGTCTGCAATTGAAGCCAAAAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: YSMSRLQALSVESSS*HPESRCLQLKPKEW Trigger: CCATTCTTTTGGCTTCAATTGCAGACACCTACTTTCAGGATGTCAGCTTGAAGATTCAACTGAAAGCGCTTGAAGTCTGGACATACTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATCTCACACCACAAGTCTCATaGTTAAAGTTGTCCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLRKKPRNCISDKQGNLTPQVS*LKLSSV Trigger: AACTGAGGACAACTTTAACAATGAGACTTGTGGTGT...GAGATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | TTTTTGTCTTTGAGAAAGAAGCCTAGGAATTGCATCAGTGATAAGCAGGGGAATAGTAGGTGTCTGCAATaGAAGCCAAAAGAATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FLSLRKKPRNCISDKQGNSRCLQ*KPKEWR Trigger: ACGCCATTCTTTTGGCTTCAATTGCAGACACCTACT...ATTCCCCTGCTTATCACTGATGCAATTCCTAGGCTTCTTTCTCAAAGACAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | TCTATAGATTGTTGGGATGCACTGTGTGAAGGTTGTCTCTGTATATCCAACCATTTCAAGCGCTTTCAGTaGAATCTTCAAGCTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: SIDCWDALCEGCLCISNHFKRFQ*NLQADI Trigger: GATGTCAGCTTGAAGATTCAACTGAAAGCGCTTGAA...ATGGTTGGATATACAGAGACAACCTTCACACAGTGCATCCCAACAATCTATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACCCAAGGATATTAACATaGAGGAAGCTGCTTGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RAENCYSYGFSPALYCINPRILT*RKLLAD Trigger: ATCAGCAAGCAGCTTCCTCAATGTTAATATCCTTGG...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS-3UTR CAA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACTGGCAATTCTTTCTATaGTTGCAAACACCTCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RAENCYSYGFSPALYCINWQFFL*LQTPRL Trigger: TAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCA...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS-3UTR CAA 90 bp | AGAGCTGAGAACTGTTATTCTTATGGCTTCTCACCTGCCTTATACTGCATAAACGTCTCATTGTTAAAGTaGTCCTCAGTTACGAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RAENCYSYGFSPALYCINVSLLK*SSVTRY Trigger: GTATCTCGTAACTGAGGACAACTTTAACAATGAGAC...GTTTATGCAGTATAAGGCAGGTGAGAAGCCATAAGAATAACAGTTCTCAGCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS GCA 72 bp | GCCTCCTTGGCTTTACGCCCAAAGATAGACTGGCACTaGAGGTACCTGGATCTGCATCCCTTACGGAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ASLALRPKIDWH*RYLDLHPLRKQ Trigger: TTGTTTCCGTAAGGGATGCAGATCCAGGTACCTGCAGTGCCAGTCTATCTTTGGGCGTAAAGCCAAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | TCCATCCTGCTTGTAAGAGTCATCTGGACAGACACCTaGGGTCCCATCACAGTACTCTTCGAGGTCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: SILLVRVIWTDT*GPITVLFEVTL Trigger: GAGTGTGACCTCGAAGAGTACTGTGATGGGACCTCAGGTGTCTGTCCAGATGACTCTTACAAGCAGGATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CCA 72 bp | AGAGCCTTCCACGGAGCCCACGTAATTACACTGGTCTaGTATATGCGGATAATCCTCTATCAGACTGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RAFHGAHVITLV*YMRIILYQTAL Trigger: GAGGGCAGTCTGATAGAGGATTATCCGCATATACCAGACCAGTGTAATTACGTGGGCTCCGTGGAAGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | CACGGGCAAACACGAATCTATCCAGGTCAAAGACCATaGCCAGTTCCAGGTACCTTTGGTGCTTGTAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: HGQTRIYPGQRP*PVPGTFGACRT Trigger: AGTCCTACAAGCACCAAAGGTACCTGGAACTGGTCATGGTCTTTGACCTGGATAGATTCGTGTTTGCCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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| CDS CCA 72 bp | AGAAAACTGGCAGATGTCTTGGCAACAGTAACTTCTTaGGTCGCAGGTGAACAACACGCGCCTTGCCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RKLADVLATVTS*VAGEQHAPCLL Trigger: TAGAAGGCAAGGCGCGTGTTGTTCACCTGCGACCCAAGAAGTTACTGTTGCCAAGACATCTGCCAGTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | AGTTACATTTATGACAGCAAAGCCCAGAGGAGCAGTTaGCACCTTCTTTCCATTTACAGTCCGGCCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SYIYDSKAQRSS*HLLSIYSPAHS Trigger: GCTGTGGGCCGGACTGTAAATGGAAAGAAGGTGTCAACTGCTCCTCTGGGCTTTGCTGTCATAAATGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CCA 72 bp | GCATCCCTTACGGAAACAAAAGCCTCCGTTTCTGCATaGAGTTCCATCCTGCTTGTAAGAGTCATCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ASLTETKASVSA*SSILLVRVIWT Trigger: TGTCCAGATGACTCTTACAAGCAGGATGGAACTCCATGCAGAAACGGAGGCTTTTGTTTCCGTAAGGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS GCA 72 bp | ATCTGCATCCCTTACGGAAACAAAAGCCTCCGTTTCTaGATGGAGTTCCATCCTGCTTGTAAGAGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ICIPYGNKSLRF*MEFHPACKSHL Trigger: CAGATGACTCTTACAAGCAGGATGGAACTCCATGCAGAAACGGAGGCTTTTGTTTCCGTAAGGGATGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | TATGCGGATAATCCTCTATCAGACTGCCCTCTTGAGTaGAGGAGAAAACTGGCAGATGTCTTGGCAACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: YADNPLSDCPLE*RRKLADVLATV Trigger: TACTGTTGCCAAGACATCTGCCAGTTTTCTCCTTCACTCAAGAGGGCAGTCTGATAGAGGATTATCCGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | TCATCATGTATCATCCCCACACAATGGCCCAATTCATaGGCAGTCCAAGTAGCAGGCCCAAGGATATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: SSCIIPTQWPNS*AVQVAGPRILT Trigger: TGTTAATATCCTTGGGCCTGCTACTTGGACTGCTCATGAATTGGGCCATTGTGTGGGGATGATACATGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS CAA 72 bp | TTCCATTTACAGTCCGGCCCACAGCACAGGTCTTTTTaGCAGTCTTCTTTAGAACCACAGTCACATTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FHLQSGPQHRSF*QSSLEPQSHSS Trigger: AGAGGAATGTGACTGTGGTTCTAAAGAAGACTGCAAAAAAGACCTGTGCTGTGGGCCGGACTGTAAATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CAA 72 bp | GGTTCCCAGCCATATGAGCAATGGCAATTCTTTCTATaGTTGCAAACACCTCGGCTATTGCACTTGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSQPYEQWQFFL*LQTPRLLHLSG Trigger: ACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CAA 90 bp | CCACCTGTTTCTTCATCAACCACACCACAAGTCTCATTGTTAAAGTaGTCCTCAGTTACGAGATACACCACGTGTTCGAAACTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPVSSSTTPQVSLLK*SSVTRYTTCSKLEE Trigger: CTCTTCCAGTTTCGAACACGTGGTGTATCTCGTAACTGAGGACAACTTTAACAATGAGACTTGTGGTGTGGTTGATGAAGAAACAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
||
| CDS CAA 90 bp | ACACCTTCTTTCCATTTACAGTCCGGCCCACAGCACAGGTCTTTTTaGCAGTCTTCTTTAGAACCACAGTCACATTCCTCTTTGTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TPSFHLQSGPQHRSF*QSSLEPQSHSSLFS Trigger: GGAAAACAAAGAGGAATGTGACTGTGGTTCTAAAGAAGACTGCAAAAAAGACCTGTGCTGTGGGCCGGACTGTAAATGGAAAGAAGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS CAA 90 bp | CAAAATGGGGGTTCCCAGCCATATGAGCAATGGCAATTCTTTCTATaGTTGCAAACACCTCGGCTATTGCACTTGTCAGGTAAACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QNGGSQPYEQWQFFL*LQTPRLLHLSGKQS Trigger: TGACTGTTTACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGAACCCCCATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
||
| CDS TCA 72 bp | TCCAGACTTCAAGCGCTTTCAGTTGAATCTTCAAGCTaGCATCCTGAAAGTAGGTGTCTGCAATTGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRLQALSVESSS*HPESRCLQLKP Trigger: TGGCTTCAATTGCAGACACCTACTTTCAGGATGTCAGCTTGAAGATTCAACTGAAAGCGCTTGAAGTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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| CDS TCA 72 bp | CTACACACATATCCTGATGGAAGGAAGTTACATTTATaGCAGCAAAGCCCAGAGGAGCAGTTGACACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LHTYPDGRKLHL*QQSPEEQLTPS Trigger: AGAAGGTGTCAACTGCTCCTCTGGGCTTTGCTGTCATAAATGTAACTTCCTTCCATCAGGATATGTGTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS TCA 72 bp | ATACACTGTAGCCTGCCACAGATTGTGTTGCCTCTATaGCACCTTGTATATCGGGTAGCATTTACAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: IHCSLPQIVLPL*HLVYRVAFTMP Trigger: TGGCATTGTAAATGCTACCCGATATACAAGGTGTCATAGAGGCAACACAATCTGTGGCAGGCTACAGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS TCA 72 bp | TCCTACCTCTACACAAAATGGGGGTTCCCAGCCATATaGGCAATGGCAATTCTTTCTATTGTTGCAAACACC | + |
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Preference number: 6 (lower is better) Translates to: SYLYTKWGFPAI*AMAILSIVANT Trigger: GGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGAACCCCCATTTTGTGTAGAGGTAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS CAA 72 bp | ATCCAGGTCAAAGACCATGACCAGTTCCAGGTACCTTaGGTGCTTGTAGGACTGATGAAAACTACTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: IQVKDHDQFQVP*VLVGLMKTTYP Trigger: AGGATAAGTAGTTTTCATCAGTCCTACAAGCACCAAAGGTACCTGGAACTGGTCATGGTCTTTGACCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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| CDS CAA 72 bp | TCCCAGCCATATGAGCAATGGCAATTCTTTCTATTGTaGCAAACACCTCGGCTATTGCACTTGTCAGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SQPYEQWQFFLL*QTPRLLHLSGK Trigger: TTTACCTGACAAGTGCAATAGCCGAGGTGTTTGCAACAATAGAAAGAATTGCCATTGCTCATATGGCTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS GCA 72 bp | ATCTGTAAGAGGTATGACAAAGAACTGTCTACACCCTaGGCCCCTTTCTTAAAGCTTATTACTTTGGGAATG | + |
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Preference number: 6 (lower is better) Translates to: ICKRYDKELSTP*APFLKLITLGM Trigger: CATTCCCAAAGTAATAAGCTTTAAGAAAGGGGCGCAGGGTGTAGACAGTTCTTTGTCATACCTCTTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050342.5 |
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| CDS CAA 72 bp | TCTTCATCAACCACACCACAAGTCTCATTGTTAAAGTaGTCCTCAGTTACGAGATACACCACGTGTTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSSTTPQVSLLK*SSVTRYTTCSK Trigger: TTTCGAACACGTGGTGTATCTCGTAACTGAGGACAACTTTAACAATGAGACTTGTGGTGTGGTTGATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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| CDS CAA 72 bp | CAATTTTATTTCCACACCTCTCTACGATATGTAGCTTaGGGAAGTCAGACAGACAATAGGACATTTTATAAG | + |
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Preference number: 6 (lower is better) Translates to: QFYFHTSLRYVA*GSQTDNRTFYK Trigger: CTTATAAAATGTCCTATTGTCTGTCTGACTTCCCAAAGCTACATATCGTAGAGAGGTGTGGAAATAAAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050342.5 ENSMUST00000198363.2 |
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