Pregenerated sensors for ADAM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031553Ensembl transcript IDs: ENSMUST00000033958.15, ENSMUST00000167431.2, ENSMUST00000167703.8, ENSMUST00000169598.2, ENSMUST00000170318.8, ENSMUST00000171438.8, ENSMUST00000171611.9
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTGTCATGAGGTTCTGGTCTGTGTTGCCACCGGAGACCACGCCTaGGTTCATGGACCCTCTGTTGAATGCTTCCTCTTTGTGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: DCHEVLVCVATGDHA*VHGPSVECFLFVLQ Trigger: TTGGAGCACAAAGAGGAAGCATTCAACAGAGGGTCCATGAACCCAGGCGTGGTCTCCGGTGGCAACACAGACCAGAACCTCATGACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CCA 90 bp | GTCTCTGGTGGGCCACAGTCACATTGCTCTGGGACCTCCAGGAGATaGTTACCACAATACGATCCACCTTGGGGCTGGACAACAAATTCT | + |
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Preference number: 1 (lower is better) Translates to: VSGGPQSHCSGTSRR*LPQYDPPWGWTTNS Trigger: AGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTGTGGTAACCATCTCCTGGAGGTCCCAGAGCAATGTGACTGTGGCCCACCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 90 bp | GCTACCTGGGACCGTCATGAAGTTCTGGTCTGTGTTGCCATGATATaGGTAGCTGTTGAAGCTACCTGGGACTGTCATGAGGTTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: ATWDRHEVLVCVAMI*VAVEATWDCHEVLV Trigger: GACCAGAACCTCATGACAGTCCCAGGTAGCTTCAACAGCTACGCATATCATGGCAACACAGACCAGAACTTCATGACGGTCCCAGGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 90 bp | GCTACCTGGGACCGTCATGAAGTTCTGGTCTGTGTTGCCATGATATaGGTAGCTGTTGAAGCTACCTGGGACCGTCATGAAGTTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: ATWDRHEVLVCVAMI*VAVEATWDRHEVLV Trigger: GACCAGAACTTCATGACGGTCCCAGGTAGCTTCAACAGCTACTCATATCATGGCAACACAGACCAGAACTTCATGACGGTCCCAGGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 90 bp | TGTGAGAGAACAATGGCAAAGCCCTCCACAGCTAACGTCTTTGGATaGAGAGCAATTCCTGCGGTAAAATTTGGGTTGCAGGCCATCCCA | + |
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Preference number: 1 (lower is better) Translates to: CERTMAKPSTANVFG*RAIPAVKFGLQAIP Trigger: TGGGATGGCCTGCAACCCAAATTTTACCGCAGGAATTGCTCTGCATCCAAAGACGTTAGCTGTGGAGGGCTTTGCCATTGTTCTCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CCA 90 bp | GCACAGCCTTCAGTTTCTCCATTGCAGAACTCTGGGAAATCACACTaGTCCTTACTTTTTCTGCATAGGCGTCCTCTTTCGGCTATCGTA | + |
|
Preference number: 1 (lower is better) Translates to: AQPSVSPLQNSGKSH*SLLFLHRRPLSAIV Trigger: TACGATAGCCGAAAGAGGACGCCTATGCAGAAAAAGTAAGGACCAGTGTGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGGCTGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 90 bp | CCTTTATGCCTTGGGAACGTATTGCCGAAGGATTCATTATGCATGTaGTTCCTGGACAGAAACAATTGTAGACGTCATCGTATGCCAACC | + |
|
Preference number: 1 (lower is better) Translates to: PLCLGNVLPKDSLCM*FLDRNNCRRHRMPT Trigger: GGTTGGCATACGATGACGTCTACAATTGTTTCTGTCCAGGAAGCACATGCATAATGAATCCTTCGGCAATACGTTCCCAAGGCATAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 90 bp | GCTATCGTACATGTTCTTTTATCACAGCATGGCCCTGTACCACACTaGGCAGCATCAATCAGAGTACAGTCTTTAGGGTTACAGCATTTT | + |
|
Preference number: 1 (lower is better) Translates to: AIVHVLLSQHGPVPH*AASIRVQSLGLQHF Trigger: AAAATGCTGTAACCCTAAAGACTGTACTCTGATTGATGCTGCGCAGTGTGGTACAGGGCCATGCTGTGATAAAAGAACATGTACGATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 90 bp | CAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTaGTGTTGCATAATTGCTTTGACTCTATTACTGCTGGCTGTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: QNSELLGCGLLLLWL*CCIIALTLLLLAVV Trigger: AACGACAGCCAGCAGTAATAGAGTCAAAGCAATTATGCAACATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CCA 90 bp | TTGGAGGCATGTATAACCAAAAACAGTAAGCCACAGAGAAAGAGATaGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LEACITKNSKPQRKR*ASSCSCIRPQNSEL Trigger: AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTTTGGTTATACATGCCTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| 3UTR CAA 90 bp | TTGCTCTGGGACCTCCAGGAGATGGTTACCACAATACGATCCACCTaGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLWDLQEMVTTIRST*GLDNKFCLRCIPKA Trigger: TGCCTTCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTGTGGTAACCATCTCCTGGAGGTCCCAGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTGCAGCTTTTGTATCAGGGGCACAGCCTTCAGTTTCTCCATTGCAGAACTCCACAGCAGGAACCTTTaGAGGACCTCATCAGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: VCSFCIRGTAFSFSIAELHSRNL*RTSSAS Trigger: GGATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTG...GAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACAAAAGCTGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTTAGATTGTTGCAAATCCCGTGTCCTTGGCATTTGTCATCGGCCTCACACGGGCCACAGTCACATTaGTCTGGGACCTCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LFRLLQIPCPWHLSSASHGPQSH*SGTSRR Trigger: TCTCCTGGAGGTCCCAGAGCAATGTGACTGTGGCCC...GTGTGAGGCCGATGACAAATGCCAAGGACACGGGATTTGCAACAATCTAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGAGGCAGTCTCGTTGTTaGAAGGTTCCAGGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CSCIRPQNSELLGCGLLLRQSRC*KVPGLQ Trigger: CTGCAGACCTGGAACCTTGCAACAACGAGACTGCCT...CAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCACCTTGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGAAGGCAGATGCAGAGCAATTCCTaGGGTAAAATTTGGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: DPPWGWTTNSVSDVFRRQMQSNS*GKIWVA Trigger: TGCAACCCAAATTTTACCGCAGGAATTGCTCTGCAT...CTGCCTTCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CCA 90 bp | GACAGTTGTTTAGATTGTTGCAAATCCCGTGTCCTTGGCATTTGTCATCGGCCTTCCTGCGGTAAAATTTaGGTTGCAGGCCATCCCATG | + |
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Preference number: 2 (lower is better) Translates to: DSCLDCCKSRVLGICHRPSCGKI*VAGHPM Trigger: CATGGGATGGCCTGCAACCCAAATTTTACCGCAGGA...AGGCCGATGACAAATGCCAAGGACACGGGATTTGCAACAATCTAAACAACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGCCACTACCACAAACAGTGCCATCATGGACATATGTGTCATCTCTAGTCACTGTGAGAGAACAATaGCAAAGCCCTCCACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: TWPLPQTVPSWTYVSSLVTVREQ*QSPPQL Trigger: TAGCTGTGGAGGGCTTTGCCATTGTTCTCTCACAGT...GACTAGAGATGACACATATGTCCATGATGGCACTGTTTGTGGTAGTGGCCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CAA 90 bp | CTTTTCCACAGCAGGAACCTTTGCAGGACCTCATCAGCATCCCCATaGGTTTCTATCTTGTCTTGTTCTGACCAGATCTCCAGAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFHSRNLCRTSSASP*VSILSCSDQISREF Trigger: AAACTCTCTGGAGATCTGGTCAGAACAAGACAAGATAGAAACCAATGGGGATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | GGACCCTTAGCATATTTCCCAAATAAATCTGTACACTGCCTATCTGGGTCTCGGAACAACTTTCTGAGTTaGAACTCCCACCTCAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GPLAYFPNKSVHCLSGSRNNFLS*NSHLRA Trigger: GGCTCTGAGGTGGGAGTTGCAACTCAGAAAGTTGTT...CCGAGACCCAGATAGGCAGTGTACAGATTTATTTGGGAAATATGCTAAGGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR TCA 90 bp | CAATACGATCCACCTTGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGATATCTTGTCTTGTTCTaGCCAGATCTCCAGAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: QYDPPWGWTTNSVSDVFRYLVLF*PDLQRV Trigger: AACTCTCTGGAGATCTGGTCAGAACAAGACAAGATA...TCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | GGACCCTTAGCATATTTCCCAAATAAATCTGTACACTGCCTATCTGGGTCTCGGCCGAAGGATTCATTATaGATGTGCTTCCTGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GPLAYFPNKSVHCLSGSRPKDSL*MCFLDR Trigger: TCTGTCCAGGAAGCACATGCATAATGAATCCTTCGG...CCGAGACCCAGATAGGCAGTGTACAGATTTATTTGGGAAATATGCTAAGGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CCA 90 bp | TGTATCAGGGGCACAGCCTTCAGTTTCTCCATTGCAGAACTCTGGGAAATCACAAAAACCTTTATGCCTTaGGAACGTATTGCCGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CIRGTAFSFSIAELWEITKTFMP*ERIAEG Trigger: TCCTTCGGCAATACGTTCCCAAGGCATAAAGGTTTT...TGTGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR TCA 90 bp | CAATACGATCCACCTTGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGACTTCTGTTGTGGCTTTaGTGTTGCATAATTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QYDPPWGWTTNSVSDVFRLLLWL*CCIIAL Trigger: CAAAGCAATTATGCAACATCAAAGCCACAACAGAAG...TCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGGTTCGAACCTTTCTCTaGTTTGACAAGGATTCGGTA | + |
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Preference number: 2 (lower is better) Translates to: CSCIRPQNSELLGCGLLLVRTFL*FDKDSV Trigger: TACCGAATCCTTGTCAAACCAGAGAAAGGTTCGAAC...CAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGCCACTACCACAAACAGTGCCATCATGGACATATGTGTCATCTCTAGTCGATTCATTATGCATGTaGTTCCTGGACAGAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: TWPLPQTVPSWTYVSSLVDSLCM*FLDRNN Trigger: ATTGTTTCTGTCCAGGAAGCACATGCATAATGAATC...GACTAGAGATGACACATATGTCCATGATGGCACTGTTTGTGGTAGTGGCCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTCTGTTGTGGCTTTaGTGTTGCATAATTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: RKRWASSCSCIRPQNSELLLLWL*CCIIAL Trigger: CAAAGCAATTATGCAACATCAAAGCCACAACAGAAG...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| 3UTR-3UTR CCA 90 bp | CAATACGATCCACCTTGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGAACTGTCATCTTCAGCTaGGAAAACATAGTATTAATG | + |
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Preference number: 2 (lower is better) Translates to: QYDPPWGWTTNSVSDVFRTVIFS*ENIVLM Trigger: CATTAATACTATGTTTTCCCAGCTGAAGATGACAGT...TCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTTGTCACGCAAATATGTTCCAGACTGTTTTTCAAGTTaGAGTGTGTATGCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: TKEKYGCNVPNLSRKYVPDCFSS*SVYALP Trigger: GGGCAAAGCATACACACTCCAACTTGAAAAACAGTC...TGGAACATATTTGCGTGACAAGTTGGGAACATTGCAACCATACTTTTCTTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| 3UTR CCA 72 bp | GGGCCACAGTCACATTGCTCTGGGACCTCCAGGAGATaGTTACCACAATACGATCCACCTTGGGGCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: GPQSHCSGTSRR*LPQYDPPWGWT Trigger: TGTCCAGCCCCAAGGTGGATCGTATTGTGGTAACCATCTCCTGGAGGTCCCAGAGCAATGTGACTGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | TCATCGGCCTCACACTCCCTGGTTCCCCTTAGGACATaGACACGTAAGCAATCTCCTCGGAAGCAAACCTGG | + |
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Preference number: 3 (lower is better) Translates to: SSASHSLVPLRT*TRKQSPRKQTW Trigger: CCAGGTTTGCTTCCGAGGAGATTGCTTACGTGTGCATGTCCTAAGGGGAACCAGGGAGTGTGAGGCCGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CCA 72 bp | GAGGTTCTGGTCTGTGTTGCCACCGGAGACCACGCCTaGGTTCATGGACCCTCTGTTGAATGCTTCCTCTTT | + |
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Preference number: 3 (lower is better) Translates to: EVLVCVATGDHA*VHGPSVECFLF Trigger: AAAGAGGAAGCATTCAACAGAGGGTCCATGAACCCAGGCGTGGTCTCCGGTGGCAACACAGACCAGAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 72 bp | CACCGGAGACCACGCCTGGGTTCATGGACCCTCTGTTaGATGCTTCCTCTTTGTGCTCCAATGCCTTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: HRRPRLGSWTLC*MLPLCAPMPLR Trigger: TCTCAAAGGCATTGGAGCACAAAGAGGAAGCATTCAACAGAGGGTCCATGAACCCAGGCGTGGTCTCCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | GGCAAACCCCACCAAAGCAATAGGCAGTCTCGTTGTTaGAAGGTTCCAGGTCTGCAGCTTTTGTATCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKPHQSNRQSRC*KVPGLQLLYQG Trigger: CCCCTGATACAAAAGCTGCAGACCTGGAACCTTGCAACAACGAGACTGCCTATTGCTTTGGTGGGGTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | GATCCACCTTGGGGCTGGACAACAAATTCTGTCTCCGATGTATTCCGAAGGCAGCCACAGCTAACGTCTTaGGATGCAGAGCAATTCCTG | + |
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Preference number: 3 (lower is better) Translates to: DPPWGWTTNSVSDVFRRQPQLTS*DAEQFL Trigger: CAGGAATTGCTCTGCATCCAAAGACGTTAGCTGTGG...CTGCCTTCGGAATACATCGGAGACAGAATTTGTTGTCCAGCCCCAAGGTGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | GTCTGCAGCTTTTGTATCAGGGGCACAGCCTTCAGTTTCTCCATTGCAGAACTCGAACAACTTTCTGAGTaGCAACTCCCACCTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: VCSFCIRGTAFSFSIAELEQLSE*QLPPQS Trigger: GCTCTGAGGTGGGAGTTGCAACTCAGAAAGTTGTTC...GAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACAAAAGCTGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | GACCGTCATGAAGTTCTGGTCTGTGTTGCCATGATATaGGTAGCTGTTGAAGCTACCTGGGACTGTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: DRHEVLVCVAMI*VAVEATWDCHE Trigger: CTCATGACAGTCCCAGGTAGCTTCAACAGCTACGCATATCATGGCAACACAGACCAGAACTTCATGACGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 72 bp | GACCGTCATGAAGTTCTGGTCTGTGTTGCCATGATATaGGTAGCTGTTGAAGCTACCTGGGACCGTCATGAA | + |
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Preference number: 3 (lower is better) Translates to: DRHEVLVCVAMI*VAVEATWDRHE Trigger: TTCATGACGGTCCCAGGTAGCTTCAACAGCTACTCATATCATGGCAACACAGACCAGAACTTCATGACGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGTTGTTTAGATTGTTGCAAATCCCGTGTCCTTGGCATTTGTCATCGGCCTACAATACGATCCACCTaGGGGCTGGACAACAAATTC | + |
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Preference number: 3 (lower is better) Translates to: DSCLDCCKSRVLGICHRPTIRST*GLDNKF Trigger: GAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTGT...AGGCCGATGACAAATGCCAAGGACACGGGATTTGCAACAATCTAAACAACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | GGACCCTTAGCATATTTCCCAAATAAATCTGTACACTaGCTATCTGGGTCTCGGCAAACCCCACCAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GPLAYFPNKSVH*LSGSRQTPPKQ Trigger: TTGCTTTGGTGGGGTTTGCCGAGACCCAGATAGGCAGTGTACAGATTTATTTGGGAAATATGCTAAGGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR CCA 72 bp | AAGCAAACCTGGCCACTACCACAAACAGTGCCATCATaGACATATGTGTCATCTCTAGTCCCAGTCTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: KQTWPLPQTVPS*TYVSSLVPVCD Trigger: ATCACAGACTGGGACTAGAGATGACACATATGTCCATGATGGCACTGTTTGTGGTAGTGGCCAGGTTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | TGTATCAGGGGCACAGCCTTCAGTTTCTCCATTGCAGAACTCTGGGAAATCACACCATTGGTTTCTATCTaGTCTTGTTCTGACCAGATC | + |
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Preference number: 3 (lower is better) Translates to: CIRGTAFSFSIAELWEITPLVSI*SCSDQI Trigger: GATCTGGTCAGAACAAGACAAGATAGAAACCAATGG...TGTGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTTAGATTGTTGCAAATCCCGTGTCCTTGGCATTTGTCATCGGCCTCACACCCTTCAGTTTCTCCATaGCAGAACTCTGGGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: LFRLLQIPCPWHLSSASHPSVSP*QNSGKS Trigger: TGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGG...GTGTGAGGCCGATGACAAATGCCAAGGACACGGGATTTGCAACAATCTAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | CATGTTCTTTTATCACAGCATGGCCCTGTACCACACTaGGCAGCATCAATCAGAGTACAGTCTTTAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: HVLLSQHGPVPH*AASIRVQSLGL Trigger: TAACCCTAAAGACTGTACTCTGATTGATGCTGCGCAGTGTGGTACAGGGCCATGCTGTGATAAAAGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR-3UTR CAA 90 bp | GGACCCTTAGCATATTTCCCAAATAAATCTGTACACTGCCTATCTGGGTCTCGGTCATCAGCATCCCCATaGGTTTCTATCTTGTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: GPLAYFPNKSVHCLSGSRSSASP*VSILSC Trigger: ACAAGACAAGATAGAAACCAATGGGGATGCTGATGA...CCGAGACCCAGATAGGCAGTGTACAGATTTATTTGGGAAATATGCTAAGGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 72 bp | TCTTTGTTAGTGTCGAGTTCGAACCTTTCTCTGGTTTaGCAAGGATTCGGTAGGACTGACTTTCTTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: SLLVSSSNLSLV*QGFGRTDFLAQ Trigger: CTGAGCAAGAAAGTCAGTCCTACCGAATCCTTGTCAAACCAGAGAAAGGTTCGAACTCGACACTAACAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR GCA 72 bp | AGTAGGTTATATCCTGGGCCTTTTGAGATATTTCCTTaGTTTTCCACAGCAGGAACCTTTGCAGGACCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SRLYPGPFEIFP*FSTAGTFAGPH Trigger: ATGAGGTCCTGCAAAGGTTCCTGCTGTGGAAAAGCAAGGAAATATCTCAAAAGGCCCAGGATATAACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
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| 3UTR TCA 72 bp | TCTGTTGAATGCTTCCTCTTTGTGCTCCAATGCCTTTaGGATATTCTGCTTAGCAAGCCGCTTACCAATCAT | + |
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Preference number: 3 (lower is better) Translates to: SVECFLFVLQCL*DILLSKPLTNH Trigger: ATGATTGGTAAGCGGCTTGCTAAGCAGAATATCTCAAAGGCATTGGAGCACAAAGAGGAAGCATTCAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR GCA 72 bp | TTATGCCTTGGGAACGTATTGCCGAAGGATTCATTATaGATGTGCTTCCTGGACAGAAACAATTGTAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: LCLGNVLPKDSL*MCFLDRNNCRR Trigger: ACGTCTACAATTGTTTCTGTCCAGGAAGCACATGCATAATGAATCCTTCGGCAATACGTTCCCAAGGCATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR GCA 72 bp | ACAACTGCTAAAAACCTTTATGCCTTGGGAACGTATTaGCGAAGGATTCATTATGCATGTGCTTCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TTAKNLYALGTY*RRIHYACASWT Trigger: TGTCCAGGAAGCACATGCATAATGAATCCTTCGGCAATACGTTCCCAAGGCATAAAGGTTTTTAGCAGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR GCA 72 bp | TGGTCTTCTTCTGTTGTGGCTTTGATGTTGCATAATTaGTTTGACTCTATTACTGCTGGCTGTCGTTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: WSSSVVALMLHN*FDSITAGCRYR Trigger: ACGGTAACGACAGCCAGCAGTAATAGAGTCAAAGCAATTATGCAACATCAAAGCCACAACAGAAGAAGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR TCA 72 bp | GAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTaGTGTTGCATAATTGCTTTGACTCTATTACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ELLGCGLLLLWL*CCIIALTLLLL Trigger: CAGCAGTAATAGAGTCAAAGCAATTATGCAACATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR CCA 72 bp | TGTATAACCAAAAACAGTAAGCCACAGAGAAAGAGATaGGCTAGTTCTTGCTCTTGTATCAGACCACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CITKNSKPQRKR*ASSCSCIRPQN Trigger: GTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTTTGGTTATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| 3UTR-3UTR CAA 90 bp | CCATCCCATGATATGTCGCTCCCACATAATCAGGATGATCCTTATACAGGAGTATATATCCTGGGCCTTTaGAGATATTTCCTTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSHDMSLPHNQDDPYTGVYILGL*RYFLAF Trigger: AAAAGCAAGGAAATATCTCAAAAGGCCCAGGATATA...TACTCCTGTATAAGGATCATCCTGATTATGTGGGAGCGACATATCATGGGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | AGACCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGGCAGCATGTGTGTCTCTGCCTCCTTaGCATCCTGGATGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPEQVLSVTVDTGISAACVSLPP*HPGCWC Trigger: ACACCAACATCCAGGATGCCAAGGAGGCAGAGACAC...ACATGCTGCCGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167703.8 ENSMUST00000169598.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCCTGAGACCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGAGTGACTTGTGTCTCTaGCTCCTTGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPLRPEQVLSVTVDTGISSDLCL*LLGILD Trigger: ATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACT...CGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGGTCTCAGGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169598.2 |
||
| CDS-3UTR GCA 90 bp | GACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTGATGGGCCACAGTCACATTaGTCTGGGACCTCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHRTVSFLVVVFFCCGFDGPQSH*SGTSRR Trigger: TCTCCTGGAGGTCCCAGAGCAATGTGACTGTGGCCC...ATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | GGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGCACAGCAGGAACCTTTaGAGGACCTCATCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLALVSDHRTVSFLVVHSRNL*RTSSAS Trigger: GGATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTG...CACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGGCAGCATGTCCTGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEQVLSVTVDTGISAACPGVDFL*YCDLQK Trigger: CTTCTGCAGATCACAGTACCAGAGAAAATCGACACC...AGGACATGCTGCCGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167703.8 ENSMUST00000169598.2 |
||
| 3UTR CAA 72 bp | TTGTTTAGATTGTTGCAAATCCCGTGTCCTTGGCATTaGTCATCGGCCTCACACTCCCTGGTTCCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRLLQIPCPWH*SSASHSLVPLR Trigger: CCTAAGGGGAACCAGGGAGTGTGAGGCCGATGACAAATGCCAAGGACACGGGATTTGCAACAATCTAAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTTACCTGGGACTGTCATaGGGTTCTGGTCTGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WASSCSCIRPQNSELLGCYLGLS*GSGLCC Trigger: GCAACACAGACCAGAACCTCATGACAGTCCCAGGTA...ACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | AAACCCCTGAGACCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGTGGCATCCTGGATGTTaGTGTCGATTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPLRPEQVLSVTVDTGISWHPGC*CRFSLV Trigger: TACCAGAGAAAATCGACACCAACATCCAGGATGCCA...CGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGGTCTCAGGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167703.8 ENSMUST00000169598.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGGCAGCATGTCCTGACTGTTTTTCAAGTTaGAGTGTGTATGCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PEQVLSVTVDTGISAACPDCFSS*SVYALP Trigger: GGGCAAAGCATACACACTCCAACTTGAAAAACAGTC...AGGACATGCTGCCGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169598.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTAGTACAGGTCTCTGGTaGGCCACAGTCACATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DGLVLALVSDHRTVSFLVSTGLW*ATVTLL Trigger: GAGCAATGTGACTGTGGCCCACCAGAGACCTGTACT...AACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| 3UTR CAA 72 bp | AGCAGGAACCTTTGCAGGACCTCATCAGCATCCCCATaGGTTTCTATCTTGTCTTGTTCTGACCAGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRNLCRTSSASP*VSILSCSDQIS Trigger: GGAGATCTGGTCAGAACAAGACAAGATAGAAACCAATGGGGATGCTGATGAGGTCCTGCAAAGGTTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTACTGCAACAAACCCCTaGGCAAGTGCTGAGTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCIRPQNSELLGCGLLTATNP*ASAECH Trigger: GTGACACTCAGCACTTGCTCAGGGGTTTGTTGCAGT...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTGTGTCTCTGCCTCCTTaGCATCCTGGATGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELVSLPP*HPGCWC Trigger: ACACCAACATCCAGGATGCCAAGGAGGCAGAGACAC...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTGTGTCTCTGCCTCCTTaGCATCCTGGATGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCSCIRPQNSELLGCGLLVSLPP*HPGCWC Trigger: ACACCAACATCCAGGATGCCAAGGAGGCAGAGACAC...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033958.15 ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGACTGTGAGAGAACAATaGCAAAGCCCTCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVLALVSDHRTVSFLVVTVREQ*QSPPQL Trigger: TAGCTGTGGAGGGCTTTGCCATTGTTCTCTCACAGT...CACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGGGACCTCCAGGAGATaGTTACCACAATACGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLVLALVSDHRTVSFLVGTSRR*LPQYDP Trigger: TGGATCGTATTGTGGTAACCATCTCCTGGAGGTCCC...AACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTAGTGACTTGTGTCTCTaGCTCCTTGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KRWASSCSCIRPQNSELLSDLCL*LLGILD Trigger: ATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACT...AAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTAGTGACTTGTGTCTCTaGCTCCTTGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSCIRPQNSELLGCGLLSDLCL*LLGILD Trigger: ATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACT...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033958.15 ENSMUST00000170318.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGGCTAACGTCTTTGGATaGAGAGCAATTCCTGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSCIRPQNSELLGCGLLLANVFG*RAIPAV Trigger: TACCGCAGGAATTGCTCTGCATCCAAAGACGTTAGC...CAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | GGACAACAAATTCTGTCTCCGATGTATTCCGAAGGCAGTCCAGTTCAGGTTGTGTGGCATCCTGGATGTTaGTGTCGATTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQQILSPMYSEGSPVQVVWHPGC*CRFSLV Trigger: TACCAGAGAAAATCGACACCAACATCCAGGATGCCA...CACAACCTGAACTGGACTGCCTTCGGAATACATCGGAGACAGAATTTGTTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTTCCTGCGGTAAAATTTaGGTTGCAGGCCATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELSCGKI*VAGHPM Trigger: CATGGGATGGCCTGCAACCCAAATTTTACCGCAGGA...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTACAGTCACATTGCTCTaGGACCTCCAGGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELTVTLL*DLQEMV Trigger: AACCATCTCCTGGAGGTCCCAGAGCAATGTGACTGT...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| 3UTR CAA 72 bp | GCTTTTGTATCAGGGGCACAGCCTTCAGTTTCTCCATaGCAGAACTCTGGGAAATCACACTGGTCCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: AFVSGAQPSVSP*QNSGKSHWSLL Trigger: AAGTAAGGACCAGTGTGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR CAA 72 bp | CCTGGGTTCATGGACCCTCTGTTGAATGCTTCCTCTTaGTGCTCCAATGCCTTTGAGATATTCTGCTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGFMDPLLNASS*CSNAFEIFCLA Trigger: TGCTAAGCAGAATATCTCAAAGGCATTGGAGCACAAAGAGGAAGCATTCAACAGAGGGTCCATGAACCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGTGAAGCCAGCTGTTTaGATTCATCCACACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQRKRWASSCSCIRPQNSVKPAV*IHPHYN Trigger: GTTGTAGTGTGGATGAATTCAAACAGCTGGCTTCAC...ACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTAACAACTTTCTGAGTTaGAACTCCCACCTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCIRPQNSELLGCGLLNNFLS*NSHLRA Trigger: GGCTCTGAGGTGGGAGTTGCAACTCAGAAAGTTGTT...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | GATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTAGTTCTGGTCTGTGTTaGCATGATATGCGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLVLALVSDHRTVSFLVSSGLC*HDMRSC Trigger: ACAGCTACGCATATCATGGCAACACAGACCAGAACT...AACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WASSCSCIRPQNSELLGCGVDFL*YCDLQK Trigger: CTTCTGCAGATCACAGTACCAGAGAAAATCGACACC...ACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033958.15 ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTTGGCATCCTGGATGTTaGTGTCGATTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQRKRWASSCSCIRPQNSWHPGC*CRFSLV Trigger: TACCAGAGAAAATCGACACCAACATCCAGGATGCCA...ACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTACCTCAGAGCCCATATaGTCAAACATGGCTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: WASSCSCIRPQNSELLGCTSEPI*SNMALS Trigger: GGATAAAGCCATGTTTGACCATATGGGCTCTGAGGT...ACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | CTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCCAATACGATCCACCTTaGGGCTGGACAACAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLALVSDHRTVSFLVVVQYDPP*GWTTNS Trigger: AGAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTG...GACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR TCA 90 bp | GACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTGATTATCTTGTCTTGTTCTaGCCAGATCTCCAGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DHRTVSFLVVVFFCCGFDYLVLF*PDLQRV Trigger: AACTCTCTGGAGATCTGGTCAGAACAAGACAAGATA...ATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCATGCAGAGCAATTCCTaGGGTAAAATTTGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RERDGLVLALVSDHRTVSMQSNS*GKIWVA Trigger: TGCAACCCAAATTTTACCGCAGGAATTGCTCTGCAT...GCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCCGAAGGATTCATTATaGATGTGCTTCCTGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELPKDSL*MCFLDR Trigger: TCTGTCCAGGAAGCACATGCATAATGAATCCTTCGG...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | GACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTGATCTTCAGTTTCTCCATTaGAGAACTCTGGGAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: DHRTVSFLVVVFFCCGFDLQFLH*RTLGNH Trigger: GTGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAG...ATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTGGAGGCATGTATAACCAAAAACAGTAAGCCACAGAGAAAGAGATGGAGGCAGTCTCGTTGTTaGAAGGTTCCAGGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLEACITKNSKPQRKRWRQSRC*KVPGLQ Trigger: CTGCAGACCTGGAACCTTGCAACAACGAGACTGCCT...CCATCTCTTTCTCTGTGGCTTACTGTTTTTGGTTATACATGCCTCCAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELGVDFL*YCDLQK Trigger: CTTCTGCAGATCACAGTACCAGAGAAAATCGACACC...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGACTGTTTTTCAAGTTaGAGTGTGTATGCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DGLVLALVSDHRTVSFLVDCFSS*SVYALP Trigger: GGGCAAAGCATACACACTCCAACTTGAAAAACAGTC...AACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | TGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGGACTGTTTTTCAAGTTaGAGTGTGTATGCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSCIRPQNSELLGCGLLLDCFSS*SVYALP Trigger: GGGCAAAGCATACACACTCCAACTTGAAAAACAGTC...CAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033958.15 ENSMUST00000170318.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTAAAACCTTTATGCCTTaGGAACGTATTGCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQRKRWASSCSCIRPQNSKTFMP*ERIAEG Trigger: TCCTTCGGCAATACGTTCCCAAGGCATAAAGGTTTT...ACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTTGTCATGTCACACTCTaGAGGAGCAAAACCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKRWASSCSCIRPQNSELCHVTL*RSKTRF Trigger: GAATCTGGTTTTGCTCCTCCAGAGTGTGACATGACA...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR TCA 90 bp | AGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGCTCAATTCCATAAGTaGTGTTCTCTAACTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RDGLVLALVSDHRTVSFLAQFHK*CSLTAT Trigger: TGTTGCAGTTAGAGAACATCACTTATGGAATTGAGC...CAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTTGAGATATTTCCTTaGTTTTCCACAGCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: RERDGLVLALVSDHRTVSFEIFP*FSTAGT Trigger: GGTTCCTGCTGTGGAAAAGCAAGGAAATATCTCAAA...GCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | CCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTTTGTACTTAAGGCCATaGCGCTTGAAAATCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQRKRWASSCSCIRPQNSLYLRP*RLKIKG Trigger: ACCTTTGATTTTCAAGCGGCATGGCCTTAAGTACAA...ACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCAAGTTCTGGTCTGTGTTaGCATGATATGAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSKPQRKRWASSCSCIRPSSGLC*HDMSSC Trigger: ACAGCTACTCATATCATGGCAACACAGACCAGAACT...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCAGTTCGAACCTTTCTCTaGTTTGACAAGGATTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSKPQRKRWASSCSCIRPVRTFL*FDKDSV Trigger: TACCGAATCCTTGTCAAACCAGAGAAAGGTTCGAAC...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR TCA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCAATATCCTGGGCCTTTTaGGATATTTCCTTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSKPQRKRWASSCSCIRPISWAF*DISLLF Trigger: GAAAAGCAAGGAAATATCTCAAAAGGCCCAGGATAT...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR TCA 90 bp | AGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCATTTCTCTGTTTGTATaGCTTCTGCAAAGTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RERDGLVLALVSDHRTVSISLFV*LLQSSS Trigger: ACTGGAACTTTGCAGAAGTCATACAAACAGAGAAAT...GCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGAGTGACTTGTGTCTCTaGCTCCTTGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWSDLCL*LLGILD Trigger: ATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACT...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGACACAGCAGGAACCTTTaGAGGACCTCATCAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRHSRNL*RTSSAS Trigger: GGATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTG...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTTGTTTGTATGACTTCTaGAAAGTTCCAGTAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WASSCSCIRPQNSELLGCCLYDF*KVPVAN Trigger: GTTTGCTACTGGAACTTTGCAGAAGTCATACAAACA...ACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | GATAAAAGCAGTGAGTCTTTACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTGTGTCTCTGCCTCCTTaGCATCCTGGATGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKSSESLLKKSMVAMFPTVSLPP*HPGCWC Trigger: ACACCAACATCCAGGATGCCAAGGAGGCAGAGACAC...AGTTGGGAACATTGCAACCATACTTTTCTTTAGTAAAGACTCACTGCTTTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGTGTCTCTGCCTCCTTaGCATCCTGGATGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRVSLPP*HPGCWC Trigger: ACACCAACATCCAGGATGCCAAGGAGGCAGAGACAC...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCATCTGGGAAATCACACTaGTCCTTACTTTTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSKPQRKRWASSCSCIRPSGKSH*SLLFLH Trigger: ATGCAGAAAAAGTAAGGACCAGTGTGATTTCCCAGA...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGGCTAACGTCTTTGGATaGAGAGCAATTCCTGCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWANVFG*RAIPAV Trigger: TACCGCAGGAATTGCTCTGCATCCAAAGACGTTAGC...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTGATTCATTATGCATGTaGTTCCTGGACAGAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCSCIRPQNSELLGCGLLDSLCM*FLDRNN Trigger: ATTGTTTCTGTCCAGGAAGCACATGCATAATGAATC...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | AAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACAATGCTTCCTCTTTGTaGTCCAATGCCTTTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KTVSHRERDGLVLALVSDNASSL*SNAFEI Trigger: TATCTCAAAGGCATTGGAGCACAAAGAGGAAGCATT...GTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | CTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCACTGTCATCTTCAGCTaGGAAAACATAGTATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LVLALVSDHRTVSFLVVVTVIFS*ENIVLM Trigger: CATTAATACTATGTTTTCCCAGCTGAAGATGACAGT...GACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATCCTGCGGTAAAATTTaGGTTGCAGGCCATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRSCGKI*VAGHPM Trigger: CATGGGATGGCCTGCAACCCAAATTTTACCGCAGGA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGACTGTGAGAGAACAATaGCAAAGCCCTCCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWTVREQ*QSPPQL Trigger: TAGCTGTGGAGGGCTTTGCCATTGTTCTCTCACAGT...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR TCA 90 bp | AAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACAAACCAGATTCACACTaGCAGTTGTTTAGATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTVSHRERDGLVLALVSDKPDSH*QLFRLL Trigger: CAACAATCTAAACAACTGTCAGTGTGAATCTGGTTT...GTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR TCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGTATCTTGTCTTGTTCTaGCCAGATCTCCAGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWYLVLF*PDLQRV Trigger: AACTCTCTGGAGATCTGGTCAGAACAAGACAAGATA...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGATGCAGAGCAATTCCTaGGGTAAAATTTGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWMQSNS*GKIWVA Trigger: TGCAACCCAAATTTTACCGCAGGAATTGCTCTGCAT...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGACCGAAGGATTCATTATaGATGTGCTTCCTGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRPKDSL*MCFLDR Trigger: TCTGTCCAGGAAGCACATGCATAATGAATCCTTCGG...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | ATAACCAAAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTGTTCCAGTAGCAAACTaGTTTTCCACAAAATATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITKNSKPQRKRWASSCSCVPVAN*FSTKYS Trigger: GCTATATTTTGTGGAAAAGCAGTTTGCTACTGGAAC...ACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTTTGGTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR GCA 90 bp | CATGTCCTTGATAAAAGCAGTGAGTCTTTACTAAAGAAAAGTATGGTTGCAATGAATTACTTGTGTCTCTaGCTCCTTGGCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVLDKSSESLLKKSMVAMNYLCL*LLGILD Trigger: ATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATT...CATTGCAACCATACTTTTCTTTAGTAAAGACTCACTGCTTTTATCAAGGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
||
| CDS-3UTR CCA 90 bp | GATAAAAGCAGTGAGTCTTTACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKSSESLLKKSMVAMFPTGVDFL*YCDLQK Trigger: CTTCTGCAGATCACAGTACCAGAGAAAATCGACACC...AGTTGGGAACATTGCAACCATACTTTTCTTTAGTAAAGACTCACTGCTTTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRGVDFL*YCDLQK Trigger: CTTCTGCAGATCACAGTACCAGAGAAAATCGACACC...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATGGCATCCTGGATGTTaGTGTCGATTTTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRWHPGC*CRFSLV Trigger: TACCAGAGAAAATCGACACCAACATCCAGGATGCCA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGGACTGTTTTTCAAGTTaGAGTGTGTATGCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWDCFSS*SVYALP Trigger: GGGCAAAGCATACACACTCCAACTTGAAAAACAGTC...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGGTTCGAACCTTTCTCTaGTTTGACAAGGATTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWVRTFL*FDKDSV Trigger: TACCGAATCCTTGTCAAACCAGAGAAAGGTTCGAAC...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAACCTCAGAGCCCATATaGTCAAACATGGCTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRTSEPI*SNMALS Trigger: GGATAAAGCCATGTTTGACCATATGGGCTCTGAGGT...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| 3UTR CAA 72 bp | TCCCAAGTAAGTATACTGAACATCATATTTCTCTGTTaGTATGACTTCTGCAAAGTTCCAGTAGCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQVSILNIIFLC*YDFCKVPVANC Trigger: GCAGTTTGCTACTGGAACTTTGCAGAAGTCATACAAACAGAGAAATATGATGTTCAGTATACTTACTTGGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGCTCAATTCCATAAGTaGTGTTCTCTAACTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRAQFHK*CSLTAT Trigger: TGTTGCAGTTAGAGAACATCACTTATGGAATTGAGC...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATTTGAGATATTTCCTTaGTTTTCCACAGCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRFEIFP*FSTAGT Trigger: GGTTCCTGCTGTGGAAAAGCAAGGAAATATCTCAAA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR GCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGGATTCATTATGCATGTaGTTCCTGGACAGAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWDSLCM*FLDRNN Trigger: ATTGTTTCTGTCCAGGAAGCACATGCATAATGAATC...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| CDS-3UTR CCA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGACTGTCATCTTCAGCTaGGAAAACATAGTATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWTVIFS*ENIVLM Trigger: CATTAATACTATGTTTTCCCAGCTGAAGATGACAGT...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
||
| 3UTR CAA 72 bp | CAAGGATTCGGTAGGACTGACTTTCTTGCTCAGAATTaGCGAAGTTTTCTTTTAAAGGAGAATAGTCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: QGFGRTDFLAQN*RSFLLKENSQF Trigger: AAATTGACTATTCTCCTTTAAAAGAAAACTTCGCAAATTCTGAGCAAGAAAGTCAGTCCTACCGAATCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| 3UTR CAA 72 bp | TTTACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTaGTCACGCAAATATGTTCCAAAAAGTGGGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTKEKYGCNVPN*SRKYVPKSGCK Trigger: TTTACACCCACTTTTTGGAACATATTTGCGTGACAAGTTGGGAACATTGCAACCATACTTTTCTTTAGTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
||
| CDS-3UTR CAA 90 bp | CCTGAGCAAGTGCTGAGTGTCACTGTTGATACTGGGATCTCGGCAGCATGTCCTTGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PEQVLSVTVDTGISAACPCVSAS*ASWMLV Trigger: CACCAACATCCAGGATGCCAAGGAGGCAGAGACACA...AGGACATGCTGCCGAGATCCCAGTATCAACAGTGACACTCAGCACTTGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167703.8 ENSMUST00000169598.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGCTTTTGTATCAGGGGCACAGCCTTCAGTTTCTCCATTGCAGAACTCTGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VCSFCIRGTAFSFSIAELCVSAS*ASWMLV Trigger: CACCAACATCCAGGATGCCAAGGAGGCAGAGACACA...GAGTTCTGCAATGGAGAAACTGAAGGCTGTGCCCCTGATACAAAAGCTGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170318.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCAAGGTTCTGGTCTGTGTaGCCACCGGAGACCACGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NSKPQRKRWASSCSCIRPRFWSV*PPETTP Trigger: AGGCGTGGTCTCCGGTGGCAACACAGACCAGAACCT...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS CCA 90 bp | TGTCTCTGCCTCCTTGGCATCCTGGATGTTGGTGTCGATTTTCTCTaGTACTGTGATCTGCAGAAGTGGTGTTTCTACGTCTTTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLCLLGILDVGVDFL*YCDLQKWCFYVFAC Trigger: GCAGGCAAAGACGTAGAAACACCACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033958.15 ENSMUST00000167703.8 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTTGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRWASSCSCIRPQNSELCVSAS*ASWMLV Trigger: CACCAACATCCAGGATGCCAAGGAGGCAGAGACACA...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS-3UTR CAA 90 bp | AACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACCACAGCAGGAACCTTaGCAGGACCTCATCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: NSKPQRKRWASSCSCIRPPQQEP*QDLISI Trigger: GATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTGG...TGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
||
| CDS TCA 90 bp | CAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTaGTGTTGCATAATTGCGAAGGGCAGCCAAAATCCGTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QNSELLGCGLLLLWL*CCIIAKGSQNPSSM Trigger: CATGGATGACGGATTTTGGCTGCCCTTCGCAATTATGCAACATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167431.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCCACAGCTAACGTCTTaGGATGCAGAGCAATTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRWASSCSCIRPQNSELPQLTS*DAEQFL Trigger: CAGGAATTGCTCTGCATCCAAAGACGTTAGCTGTGG...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | TGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTCTGACAATACGATCCACCTaGGGGCTGGACAACAAATTC | + |
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Preference number: 5 (lower is better) Translates to: CSCIRPQNSELLGCGLLLTIRST*GLDNKF Trigger: GAATTTGTTGTCCAGCCCCAAGGTGGATCGTATTGT...CAGAAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | AAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACGAACAACTTTCTGAGTaGCAACTCCCACCTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: KTVSHRERDGLVLALVSDEQLSE*QLPPQS Trigger: GCTCTGAGGTGGGAGTTGCAACTCAGAAAGTTGTTC...GTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | GGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGTGTGAAGCCAGCTGTTaGAATTCATCCACACTACAA | + |
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Preference number: 5 (lower is better) Translates to: GLVLALVSDHRTVSFLVVCEASC*NSSTLQ Trigger: TTGTAGTGTGGATGAATTCAAACAGCTGGCTTCACA...CACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | AGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGCCTTCAGTTTCTCCATaGCAGAACTCTGGGAAATCA | + |
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Preference number: 5 (lower is better) Translates to: RDGLVLALVSDHRTVSFLPSVSP*QNSGKS Trigger: TGATTTCCCAGAGTTCTGCAATGGAGAAACTGAAGG...CAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS GCA 90 bp | ACCCGTCATTTTCCAAATATCCGGTTTCTTAATTACTTGTGTCTCTaGCTCCTTGGCATCCTGGATGTTGGTGTCGATTTTCTCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: TRHFPNIRFLNYLCL*LLGILDVGVDFLWY Trigger: GTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAAACCGGATATTTGGAAAATGACGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS CCA 90 bp | ATATCCGGTTTCTTAATTACTTGTGTCTCTGCCTCCTTGGCATCCTaGATGTTGGTGTCGATTTTCTCTGGTACTGTGATCTGCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: ISGFLITCVSASLAS*MLVSIFSGTVICRS Trigger: ACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAAACCGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS-3UTR CAA 90 bp | ACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTTGTCACGCAAATATGTTCCATGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TKEKYGCNVPNLSRKYVPCVSAS*ASWMLV Trigger: CACCAACATCCAGGATGCCAAGGAGGCAGAGACACA...TGGAACATATTTGCGTGACAAGTTGGGAACATTGCAACCATACTTTTCTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS-3UTR CAA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGCCACAGCAGGAACCTTaGCAGGACCTCATCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWPQQEP*QDLISI Trigger: GATGCTGATGAGGTCCTGCAAAGGTTCCTGCTGTGG...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRCVSAS*ASWMLV Trigger: CACCAACATCCAGGATGCCAAGGAGGCAGAGACACA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCCATTGGTTTCTATCTaGTCTTGTTCTGACCAGATC | + |
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Preference number: 5 (lower is better) Translates to: RKRWASSCSCIRPQNSELPLVSI*SCSDQI Trigger: GATCTGGTCAGAACAAGACAAGATAGAAACCAATGG...AAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | TGGGCTAGTTCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTTTGCAGATTCACTTCTaGTGCACACACATAATTAGG | + |
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Preference number: 5 (lower is better) Translates to: WASSCSCIRPQNSELLGCLQIHF*CTHIIR Trigger: CCTAATTATGTGTGTGCACAAGAAGTGAATCTGCAA...ACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGAACTAGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGGAACAACTTTCTGAGTaGCAACTCCCACCTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWEQLSE*QLPPQS Trigger: GCTCTGAGGTGGGAGTTGCAACTCAGAAAGTTGTTC...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | AAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAGACTCATCAGCATCCCCATaGGTTTCTATCTTGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: KTVSHRERDGLVLALVSDSSASP*VSILSC Trigger: ACAAGACAAGATAGAAACCAATGGGGATGCTGATGA...GTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | CACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGAGATCAGATTTGGCCACAGCTAACGTCTTaGGATGCAGAGCAATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HIKTYYKHFLGVCRDQIWPQLTS*DAEQFL Trigger: CAGGAATTGCTCTGCATCCAAAGACGTTAGCTGTGG...CCAAATCTGATCTCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | TCTTGCTCTTGTATCAGACCACAGAACAGTGAGCTTCTTGGTTGTGGTCTTCTTTATATCCTGGGCCTTTaGAGATATTTCCTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SCSCIRPQNSELLGCGLLYILGL*RYFLAF Trigger: AAAAGCAAGGAAATATCTCAAAAGGCCCAGGATATA...AAGAAGACCACAACCAAGAAGCTCACTGTTCTGTGGTCTGATACAAGAGCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | ATAACCAAAAACAGTAAGCCACAGAGAAAGAGATGGGCTAGTTCTTGCTCTTGTATCAAAAGCACTTTTTaGTACTTAAGGCCATGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ITKNSKPQRKRWASSCSCIKSTF*YLRPCR Trigger: GCGGCATGGCCTTAAGTACAAAAAAGTGCTTTTGAT...ACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCTTACTGTTTTTGGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033958.15 |
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| CDS-3UTR CAA 90 bp | ACTAAAGAAAAGTATGGTTGCAATGTTCCCAACTTGTCACGCAAATATGTTCCACGGTTTCTTAATTACTaGTGTCTCTGCCTCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: TKEKYGCNVPNLSRKYVPRFLNY*CLCLLG Trigger: GCCAAGGAGGCAGAGACACAAGTAATTAAGAAACCG...TGGAACATATTTGCGTGACAAGTTGGGAACATTGCAACCATACTTTTCTTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS-3UTR CAA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGACCATTGGTTTCTATCTaGTCTTGTTCTGACCAGATC | + |
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Preference number: 5 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRPLVSI*SCSDQI Trigger: GATCTGGTCAGAACAAGACAAGATAGAAACCAATGG...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATCATCAGCATCCCCATaGGTTTCTATCTTGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRSSASP*VSILSC Trigger: ACAAGACAAGATAGAAACCAATGGGGATGCTGATGA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS-3UTR CAA 90 bp | TGTGACAAAATGCACATCAAAACATACTACAAACATTTCCTAGGTGTCTGTAGATATATCCTGGGCCTTTaGAGATATTTCCTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: CDKMHIKTYYKHFLGVCRYILGL*RYFLAF Trigger: AAAAGCAAGGAAATATCTCAAAAGGCCCAGGATATA...TCTACAGACACCTAGGAAATGTTTGTAGTATGTTTTGATGTGCATTTTGTCACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171611.9 |
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| CDS CAA 72 bp | GGTACTGTGATCTGCAGAAGTGGTGTTTCTACGTCTTaGCCTGCAGCGATCACTTGGCCTAGGTATGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GTVICRSGVSTS*PAAITWPRYER Trigger: CCTCTCATACCTAGGCCAAGTGATCGCTGCAGGCAAAGACGTAGAAACACCACTTCTGCAGATCACAGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033958.15 ENSMUST00000167703.8 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS CAA 72 bp | GTGACTTGTGTCTCTGCCTCCTTGGCATCCTGGATGTaGGTGTCGATTTTCTCTGGTACTGTGATCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VTCVSASLASWM*VSIFSGTVICR Trigger: TCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033958.15 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS CAA 72 bp | GTATGCTTTGCCCTCAATTCTGACCACGTAAGTGACTaGTGTCTCTGCCTCCTTGGCATCCTGGATGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: VCFALNSDHVSD*CLCLLGILDVG Trigger: ACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACTTACGTGGTCAGAATTGAGGGCAAAGCATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033958.15 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS GCA 72 bp | TGGATGTTGGTGTCGATTTTCTCTGGTACTGTGATCTaGAGAAGTGGTGTTTCTACGTCTTTGCCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: WMLVSIFSGTVI*RSGVSTSLPAA Trigger: CGCTGCAGGCAAAGACGTAGAAACACCACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033958.15 ENSMUST00000167703.8 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS CAA 90 bp | TTGGAGTGTGTATGCTTTGCCCTCAATTCTGACCACGTAAGTGACTaGTGTCTCTGCCTCCTTGGCATCCTGGATGTTGGTGTCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LECVCFALNSDHVSD*CLCLLGILDVGVDF Trigger: AAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTCACTTACGTGGTCAGAATTGAGGGCAAAGCATACACACTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033958.15 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS TCA 72 bp | CATCCTGGATGTTGGTGTCGATTTTCTCTGGTACTGTaGTCTGCAGAAGTGGTGTTTCTACGTCTTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPGCWCRFSLVL*SAEVVFLRLCL Trigger: CAGGCAAAGACGTAGAAACACCACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033958.15 ENSMUST00000167703.8 ENSMUST00000169598.2 ENSMUST00000170318.8 ENSMUST00000171438.8 ENSMUST00000171611.9 |
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| CDS TCA 72 bp | GAGCTTCTTGGTTGTGGTCTTCTTCTGTTGTGGCTTTaGTGTTGCATAATTGCGAAGGGCAGCCAAAATCCG | + |
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Preference number: 6 (lower is better) Translates to: ELLGCGLLLLWL*CCIIAKGSQNP Trigger: CGGATTTTGGCTGCCCTTCGCAATTATGCAACATCAAAGCCACAACAGAAGAAGACCACAACCAAGAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167431.2 |
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| CDS CAA 72 bp | ATTACTTGTGTCTCTGCCTCCTTGGCATCCTGGATGTaGGTGTCGATTTTCTCTGGTACTGTGATCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ITCVSASLASWM*VSIFSGTVICR Trigger: TCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS CAA 90 bp | GGTTTCTTAATTACTTGTGTCTCTGCCTCCTTGGCATCCTGGATGTaGGTGTCGATTTTCTCTGGTACTGTGATCTGCAGAAGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: GFLITCVSASLASWM*VSIFSGTVICRSGV Trigger: AACACCACTTCTGCAGATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS CCA 72 bp | TTCTTAATTACTTGTGTCTCTGCCTCCTTGGCATCCTaGATGTTGGTGTCGATTTTCTCTGGTACTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: FLITCVSASLAS*MLVSIFSGTVI Trigger: GATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS CAA 90 bp | ATTTTCCAAATATCCGGTTTCTTAATTACTTGTGTCTCTGCCTCCTaGGCATCCTGGATGTTGGTGTCGATTTTCTCTGGTACTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: IFQISGFLITCVSAS*ASWMLVSIFSGTVI Trigger: GATCACAGTACCAGAGAAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAAACCGGATATTTGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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| CDS GCA 72 bp | TTTCCAAATATCCGGTTTCTTAATTACTTGTGTCTCTaGCTCCTTGGCATCCTGGATGTTGGTGTCGATTTT | + |
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Preference number: 6 (lower is better) Translates to: FPNIRFLNYLCL*LLGILDVGVDF Trigger: AAAATCGACACCAACATCCAGGATGCCAAGGAGGCAGAGACACAAGTAATTAAGAAACCGGATATTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167703.8 |
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