Pregenerated sensors for ADAM26A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048516Ensembl transcript IDs: ENSMUST00000049577.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCTGGTGGTTTCCATGTaGCACCACAATGGCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRLVVSM*HHNGSV Trigger: AACACTGCCATTGTGGTGTCACATGGAAACCACCAG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGATGCCCCATCTCGTGTaGTACAATGTGTGCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRMPHLV*YNVCHV Trigger: GACATGGCACACATTGTAGCACACGAGATGGGGCAT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGAATAGCCCTCACCACTaGAAGGGATTCCGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRNSPHH*KGFRLL Trigger: AAGCAGACGGAATCCCTTGCAGTGGTGAGGGCTATT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCCAGAACAGACTTGCTaGCACACTTTCTGTCAACAC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRPEQTC*HTFCQH Trigger: GTGTTGACAGAAAGTGTGTCAGCAAGTCTGTTCTGG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGACGTTTTTGACAGTCTaGTGGTTTCCATGTGACACC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRTFLTV*WFPCDT Trigger: GGTGTCACATGGAAACCACCAGACTGTCAAAAACGT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGTTGAGCTCTTGGGCATaGTTTCATAACTTGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRLSSWA*FHNLCH Trigger: ATGGCACAAGTTATGAAATCATGCCCAAGAGCTCAA...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGATCTCTAGTGTGCCTTaGAAACTTCCAAAACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRISSVP*KLPKQV Trigger: CACCTGTTTTGGAAGTTTGCAAGGCACACTAGAGAT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGAAAGTGTGGGGGCATTaGTTTCTTGTAGCTTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRKVWGH*FLVASF Trigger: AAACGAAGCTACAAGAAAGCAATGCCCCCACACTTT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGATAACCCACATCTCATaGGAGATGATTCTGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRITHIS*EMILNP Trigger: GGGATTCAGAATCATCTCCCATGAGATGTGGGTTAT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR TCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGACAATCCATTTGGAATaGGATAAAGGCAATGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRTIHLE*DKGNGG Trigger: ACCTCCATTGCCTTTATCTCATTCCAAATGGATTGT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGGGAACTGGCAATTTTTaGAACAAAGTCCAAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRGTGNF*NKVQKH Trigger: GTGCTTTTGGACTTTGTTGCAAAAATTGCCAGTTCC...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCACTTCTACTTCCATTaGCAAAAATCTTCCGACACT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRHFYFH*QKSSDT Trigger: AGTGTCGGAAGATTTTTGGCAATGGAAGTAGAAGTG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCATTTATCTCTAGTGTaGCTTGCAAACTTCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRHLSLV*LANFQN Trigger: GTTTTGGAAGTTTGCAAGGCACACTAGAGATAAATG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGTCATTCTGCACAAAATaGTGTTGTTCAAGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRSFCTK*CCSRRS Trigger: TGATCTCCTTGAACAACACCATTTTGTGCAGAATGA...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGGAATTTGTAAAAGTGTaGGGGCATTGCTTTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFREFVKV*GHCFLV Trigger: TACAAGAAAGCAATGCCCCCACACTTTTACAAATTC...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCCTGCTTTAAGGAACTaGCAATTTTTGCAACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRPALRN*QFLQQS Trigger: ACTTTGTTGCAAAAATTGCCAGTTCCTTAAAGCAGG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCATGTGACACCACAATaGCAGTGTTGTTTATTATTG | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRHVTPQ*QCCLLL Trigger: CAATAATAAACAACACTGCCATTGTGGTGTCACATG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGTTGCCAAACATGTTTTaGTTCCAAGTACAGAAATCA | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRLPNMF*FQVQKS Trigger: TGATTTCTGTACTTGGAAGCAAAACATGTTTGGCAA...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGAGTACATCAGCAATTTaGCATGTTCTATATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: IQVRCFSPNSESGTISFRSTSAI*HVLYVE Trigger: CTCTACATATAGAACATGCCAAATTGCTGATGTACT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 90 bp | AATGGAGGTGGTCCACTGTCTATACTACCTCCATGGCCACGTTTTTaGCAGTCTGGTGGTTTCCATGTGACACCACAATGGCAGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: NGGGPLSILPPWPRF*QSGGFHVTPQWQCC Trigger: ACAACACTGCCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGACCACCTCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CCA 90 bp | ACCTGTGGTGGGTCCACCAATTCTCATAGGGAATTTGTAAAAGTGTaGGGGCATTGCTTTCTTGTAGCTTCGTTTGTTGTGCTGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: TCGGSTNSHREFVKV*GHCFLVASFVVLFP Trigger: AGGAAACAGCACAACAAACGAAGCTACAAGAAAGCAATGCCCCCACACTTTTACAAATTCCCTATGAGAATTGGTGGACCCACCACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CCA 90 bp | TCCACTGTCTATACTACCTCCATGGCCACGTTTTTGACAGTCTGGTaGTTTCCATGTGACACCACAATGGCAGTGTTGTTTATTATTGCA | + |
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Preference number: 5 (lower is better) Translates to: STVYTTSMATFLTVW*FPCDTTMAVLFIIA Trigger: TGCAATAATAAACAACACTGCCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CCA 90 bp | TGGTCCACTGTCTATACTACCTCCATGGCCACGTTTTTGACAGTCTaGTGGTTTCCATGTGACACCACAATGGCAGTGTTGTTTATTATT | + |
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Preference number: 5 (lower is better) Translates to: WSTVYTTSMATFLTV*WFPCDTTMAVLFII Trigger: AATAATAAACAACACTGCCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS GCA 90 bp | AAAGCGGTCACCCTGTCTGTTCATTTCCATGTAGCAAATTTCATCTaGACTTCTACTTCCATTGCCAAAAATCTTCCGACACTGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: KAVTLSVHFHVANFI*TSTSIAKNLPTLLI Trigger: GATGAGCAGTGTCGGAAGATTTTTGGCAATGGAAGTAGAAGTGCAGATGAAATTTGCTACATGGAAATGAACAGACAGGGTGACCGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 90 bp | TATGGTATAACTGTGGTGAACAGTTACTTACCAGAACAGACTTGCTaGCACACTTTCTGTCAACACATATATGGTCTGGAGCATAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: YGITVVNSYLPEQTC*HTFCQHIYGLEHKL Trigger: CAGCTTATGCTCCAGACCATATATGTGTTGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTTCACCACAGTTATACCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCTTCCAAAACAGGTGTaGACAATGACCGGGGACTCT | + |
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Preference number: 5 (lower is better) Translates to: IQVRCFSPNSESGTISFRLPKQV*TMTGDS Trigger: AGAGTCCCCGGTCATTGTCAACACCTGTTTTGGAAG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCTGCACAAAATGGTGTaGTTCAAGGAGATCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: IQVRCFSPNSESGTISFRLHKMV*FKEITL Trigger: CAAGGTGATCTCCTTGAACAACACCATTTTGTGCAG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGAAAAGTGTGGGGGCATaGCTTTCTTGTAGCTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: IQVRCFSPNSESGTISFRKSVGA*LSCSFV Trigger: AACGAAGCTACAAGAAAGCAATGCCCCCACACTTTT...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGGAGTACATCAGCAATTaGGCATGTTCTATATGTAGA | + |
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Preference number: 5 (lower is better) Translates to: IQVRCFSPNSESGTISFREYISN*ACSICR Trigger: TCTACATATAGAACATGCCAAATTGCTGATGTACTC...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGGTAAGATGTTTTTCACCCAATTCTGAATCTGGCACAATTTCTTTTAGGCAGTGTTGTTTATTATaGCAGATTCCTTGCATATGG | + |
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Preference number: 5 (lower is better) Translates to: IQVRCFSPNSESGTISFRQCCLL*QIPCIW Trigger: CCATATGCAAGGAATCTGCAATAATAAACAACACTG...CCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACCTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 90 bp | CAATGGAGGTGGTCCACTGTCTATACTACCTCCATGGCCACGTTTTaGACAGTCTGGTGGTTTCCATGTGACACCACAATGGCAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QWRWSTVYTTSMATF*TVWWFPCDTTMAVL Trigger: CAACACTGCCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGACCACCTCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 72 bp | GGTCCACTGTCTATACTACCTCCATGGCCACGTTTTTaGCAGTCTGGTGGTTTCCATGTGACACCACAATGG | + |
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Preference number: 6 (lower is better) Translates to: GPLSILPPWPRF*QSGGFHVTPQW Trigger: CCATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 72 bp | TGGTCCACTGTCTATACTACCTCCATGGCCACGTTTTaGACAGTCTGGTGGTTTCCATGTGACACCACAATG | + |
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Preference number: 6 (lower is better) Translates to: WSTVYTTSMATF*TVWWFPCDTTM Trigger: CATTGTGGTGTCACATGGAAACCACCAGACTGTCAAAAACGTGGCCATGGAGGTAGTATAGACAGTGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 72 bp | ATGCCCCATCTCGTGTGCTACAATGTGTGCCATGTCTaGCATTACATCAGAAAGGACACTGCTAACTCCACA | + |
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Preference number: 6 (lower is better) Translates to: MPHLVCYNVCHV*HYIRKDTANST Trigger: TGTGGAGTTAGCAGTGTCCTTTCTGATGTAATGTCAGACATGGCACACATTGTAGCACACGAGATGGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CCA 72 bp | CTTGCTGACACACTTTCTGTCAACACATATATGGTCTaGAGCATAAGCTGTGCCATCGCTCACAGCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: LADTLSVNTYMV*SISCAIAHSSN Trigger: ATTGGAGCTGTGAGCGATGGCACAGCTTATGCTCCAGACCATATATGTGTTGACAGAAAGTGTGTCAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 72 bp | ATCTCTAGTGTGCCTTGCAAACTTCCAAAACAGGTGTaGACAATGACCGGGGACTCTAGGTCTTCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISSVPCKLPKQV*TMTGDSRSSST Trigger: TGTGGATGAAGACCTAGAGTCCCCGGTCATTGTCAACACCTGTTTTGGAAGTTTGCAAGGCACACTAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CCA 72 bp | GGGTCCACCAATTCTCATAGGGAATTTGTAAAAGTGTaGGGGCATTGCTTTCTTGTAGCTTCGTTTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSTNSHREFVKV*GHCFLVASFVV Trigger: CACAACAAACGAAGCTACAAGAAAGCAATGCCCCCACACTTTTACAAATTCCCTATGAGAATTGGTGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 90 bp | ACTGCTCTCCTTCTTCAACCACCTTATTCCCACACACGGTCAGGTTaGTTACTAGTGCTTCTGGAATATCATATAAGCAACTTCGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: TALLLQPPYSHTRSG*LLVLLEYHISNFVW Trigger: CCAAACGAAGTTGCTTATATGATATTCCAGAAGCACTAGTAACAAACCTGACCGTGTGTGGGAATAAGGTGGTTGAAGAAGGAGAGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 72 bp | ACTGTGGTGAACAGTTACTTACCAGAACAGACTTGCTaGCACACTTTCTGTCAACACATATATGGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: TVVNSYLPEQTC*HTFCQHIYGLE Trigger: CTCCAGACCATATATGTGTTGACAGAAAGTGTGTCAGCAAGTCTGTTCTGGTAAGTAACTGTTCACCACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 72 bp | CCAGATGTTCAAATGTTGACGTTGAGCTCTTGGGCATaGTTTCATAACTTGTGCCATTTATCTCTAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PDVQMLTLSSWA*FHNLCHLSLVC Trigger: GCACACTAGAGATAAATGGCACAAGTTATGAAATCATGCCCAAGAGCTCAACGTCAACATTTGAACATCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 90 bp | TCTGGTGGTTTCCATGTGACACCACAATGGCAGTGTTGTTTATTATaGCAGATTCCTTGCATATGGTATAACTGTGGTGAACAGTTACTT | + |
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Preference number: 6 (lower is better) Translates to: SGGFHVTPQWQCCLL*QIPCIWYNCGEQLL Trigger: AAGTAACTGTTCACCACAGTTATACCATATGCAAGGAATCTGCAATAATAAACAACACTGCCATTGTGGTGTCACATGGAAACCACCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS GCA 72 bp | AATTCTCATAGGGAATTTGTAAAAGTGTGGGGGCATTaGTTTCTTGTAGCTTCGTTTGTTGTGCTGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NSHREFVKVWGH*FLVASFVVLFP Trigger: AGGAAACAGCACAACAAACGAAGCTACAAGAAAGCAATGCCCCCACACTTTTACAAATTCCCTATGAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS GCA 72 bp | ACCCTGTCTGTTCATTTCCATGTAGCAAATTTCATCTaGACTTCTACTTCCATTGCCAAAAATCTTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: TLSVHFHVANFI*TSTSIAKNLPT Trigger: TGTCGGAAGATTTTTGGCAATGGAAGTAGAAGTGCAGATGAAATTTGCTACATGGAAATGAACAGACAGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS TCA 72 bp | TCTAAAACAATAAGGATGTACACAATCCATTTGGAATaGGATAAAGGCAATGGAGGTGGTCCACTGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: SKTIRMYTIHLE*DKGNGGGPLSI Trigger: TATAGACAGTGGACCACCTCCATTGCCTTTATCTCATTCCAAATGGATTGTGTACATCCTTATTGTTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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| CDS CAA 72 bp | CTGACTAAAAGGTGTATGATATCATGTCTAATGCGATaGCCAAACATGTTTTGCTTCCAAGTACAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LTKRCMISCLMR*PNMFCFQVQKS Trigger: TGATTTCTGTACTTGGAAGCAAAACATGTTTGGCAATCGCATTAGACATGATATCATACACCTTTTAGTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049577.3 |
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