RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM25 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071937

Ensembl transcript IDs: ENSMUST00000096663.5

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACACTATGTTGTCCTCTGTaGCAGCAAAGGAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTLCCPL*QQRRMP
Trigger: GGGCATCCTCCTTTGCTGCCACAGAGGACAACATAG...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTTTCAGGCAATGTGGTaGGTCCCACCCAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMFQAMW*VPPKVA
Trigger: TGCAACCTTGGGTGGGACCCACCACATTGCCTGAAA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGCTACGTTCTCACATTaGACTCTGCCACAGAGGATG +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTATFSH*TLPQRM
Trigger: CATCCTCTGTGGCAGAGTTCAATGTGAGAACGTAGC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGGGCAGCAAAGGAGGATaGCCTTTGTCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMGSKGG*PLSCLH
Trigger: ATGCAGACAAGACAAAGGGCATCCTCCTTTGCTGCC...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTCGGAGGATGCCTTTTaGCTTCTTTTCCTTGCGCAT +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMSEDAF*LLFLAH
Trigger: ATGCGCAAGGAAAAGAAGTCAAAAGGCATCCTCCGA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGGCTTGCCTCGGAGGATaGCTTTTGACTTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMACLGG*LLTSFP
Trigger: AGGAAAAGAAGTCAAAAGGCATCCTCCGAGGCAAGC...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGGCTTTGCATCAGAGTaGGGTTCTCATTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTGFASE*GSHSAE
Trigger: TTCAGCAGAATGAGAACCCCACTCTGATGCAAAGCC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACACACCCAAGGTTGCAGTaGCAGTGGTGTAAATTGTTG +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTHPRLQ*QWCKLL
Trigger: CAACAATTTACACCACTGCCACTGCAACCTTGGGTG...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGGGTTCTCATTCTGCTaGAGTTTCATTTGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTGFSFC*SFICLA
Trigger: AGCAAGGCAAATGAAACTTCAGCAGAATGAGAACCC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGAAGATCACATTCATTaGCCTCTTGTCGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTEDHIH*PLVGKL
Trigger: CAGTTTGCCGACAAGAGGTCAATGAATGTGATCTTC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAACAGCATGGATCATCTaGACAGCTTTTTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTTAWII*TAFCRS
Trigger: GGATCTGCAAAAAGCTGTGCAGATGATCCATGCTGT...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACATCAGTGCACATCTCATaGGGAGTAATTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTSVHIS*GVILSP
Trigger: AGGAGACAGAATTACTCCCCATGAGATGTGCACTGA...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTTAAGTATGCATCTCTaGTCACACCACAGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMLSMHL*SHHSCQ
Trigger: TTGGCAACTGTGGTGTGATCAGAGATGCATACTTAA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGTTGCATGTCTTAGGTaGACACTGACTTCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTVACLR*TLTSPN
Trigger: ATTTGGAGAAGTCAGTGTTCACCTAAGACATGCAAC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTCTATGCTACGTACCTaGACGTGGTTTCTTTCATTC +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMSMLRT*TWFLSF
Trigger: GAATGAAAGAAACCACGTGCAGGTACGTAGCATAGA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGATCTGCACAGCTTTTTaGAGATCCACAATCACACTG +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMICTAF*RSTITL
Trigger: CAGTGTGATTGTGGATCTGCAAAAAGCTGTGCAGAT...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTCCACAGTTATGAGATaGCACACAGACACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMSTVMR*HTDTSN
Trigger: ATTGGAAGTGTCTGTGTGCCATCTCATAACTGTGGA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAATGGTCCCTCAAAAATaGAATGTGTGCTACGTTCTC +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTMVPQK*NVCYVL
Trigger: GAGAACGTAGCACACATTCCATTTTTGAGGGACCAT...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGATCTTCTTTGTTTTCTaGGGTGGGAACTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMIFFVF*GGNFGF
Trigger: GAACCCAAAGTTCCCACCCCAGAAAACAAAGAAGAT...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGCTGACTTCTCCAAATTaGCTTACTGACACACTTCTT +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMLTSPN*LTDTLL
Trigger: AAGAAGTGTGTCAGTAAGTCAATTTGGAGAAGTCAG...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGAAGTTTCATTTGCCTTaGTATCTCTTCTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMKFHLP*YLFCQC
Trigger: GCACTGACAGAAGAGATAGCAAGGCAAATGAAACTT...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR GCA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGAGTGGTGTAAATTGTTaGACACACCTTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMSGVNC*THLSCC
Trigger: GCAACATGAAAGGTGTGTGCAACAATTTACACCACT...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR TCA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAAATAACTACAGTTACTaGACTTCGGGATACCATTGT +
Preference number: 4 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTNNYSY*TSGYHC
Trigger: ACAATGGTATCCCGAAGTTCAGTAACTGTAGTTATT...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 90 bp AGGCCACTTTTCAGGCAATGTGGTGGGTCCCACCCAAGGTTGCAGTaGCAGTGGTGTAAATTGTTGCACACACCTTTCATGTTGCATGTC +
Preference number: 5 (lower is better)
Translates to: RPLFRQCGGSHPRLQ*QWCKLLHTPFMLHV
Trigger: GACATGCAACATGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAGTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 90 bp CCTGTGACCCGTAAGGGTATCACTACTTCTGGGAGGCTGGTGTGCTaGGCATACCCAGTCAAGGGCCATGATGAAAGAATATTCAATATC +
Preference number: 5 (lower is better)
Translates to: PVTRKGITTSGRLVC*AYPVKGHDERIFNI
Trigger: GATATTGAATATTCTTTCATCATGGCCCTTGACTGGGTATGCTCAGCACACCAGCCTCCCAGAAGTAGTGATACCCTTACGGGTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 90 bp CTTTTCAGGCAATGTGGTGGGTCCCACCCAAGGTTGCAGTGGCAGTaGTGTAAATTGTTGCACACACCTTTCATGTTGCATGTCTTAGGT +
Preference number: 5 (lower is better)
Translates to: LFRQCGGSHPRLQWQ*CKLLHTPFMLHVLG
Trigger: ACCTAAGACATGCAACATGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACACCATCCCCACAGAGCTaGCCTCGGAGGATGCCTTTT +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTPSPQS*PRRMPF
Trigger: AAAAGGCATCCTCCGAGGCAAGCTCTGTGGGGATGG...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGGGGTCCCACCCAAGGTaGCAGTGGCAGTGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMGSHPR*QWQWCK
Trigger: TTTACACCACTGCCACTGCAACCTTGGGTGGGACCC...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACACTCGGAGGATGCCTTTaGACTTCTTTTCCTTGCGCA +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTLGGCL*TSFPCA
Trigger: TGCGCAAGGAAAAGAAGTCAAAAGGCATCCTCCGAG...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAACATTCATTGACCTCTaGTCGGCAAACTGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTTFIDL*SANCAC
Trigger: GCAGGCACAGTTTGCCGACAAGAGGTCAATGAATGT...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 90 bp GGCCATGATGAAAGAATATTCAATATCTCTAGCCAGACGTACAGATaGGGTATCCTTGTGTATACCACAGCCTTATCCATAGCTATGTTG +
Preference number: 5 (lower is better)
Translates to: GHDERIFNISSQTYR*GILVYTTALSIAML
Trigger: CAACATAGCTATGGATAAGGCTGTGGTATACACAAGGATACCTCATCTGTACGTCTGGCTAGAGATATTGAATATTCTTTCATCATGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGAGGTCAAGAAAACTCTaGTGGGTCCACCATCCTTCA +
Preference number: 5 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMRSRKL*WVHHPS
Trigger: TGAAGGATGGTGGACCCACAAGAGTTTTCTTGACCT...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACATGCTACGTTCTCACATaGAACTCTGCCACAGAGGAT +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTCYVLT*NSATED
Trigger: ATCCTCTGTGGCAGAGTTCAATGTGAGAACGTAGCA...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACACACACACCTTTCATGTaGCATGTCTTAGGTGAACAC +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTHTPFM*HVLGEH
Trigger: GTGTTCACCTAAGACATGCAACATGAAAGGTGTGTG...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 90 bp TTCCACATACAAAATTCATCTAGGAGTTCTTCTATGCTACGTACCTaGACGTGGTTTCTTTCATTCCACATCTCAACTCCAAGTAAAACT +
Preference number: 5 (lower is better)
Translates to: FHIQNSSRSSSMLRT*TWFLSFHISTPSKT
Trigger: AGTTTTACTTGGAGTTGAGATGTGGAATGAAAGAAACCACGTGCAGGTACGTAGCATAGAAGAACTCCTAGATGAATTTTGTATGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 90 bp ATACAAAATTCATCTAGGAGTTCTTCTATGCTACGTACCTGCACGTaGTTTCTTTCATTCCACATCTCAACTCCAAGTAAAACTAGCTCA +
Preference number: 5 (lower is better)
Translates to: IQNSSRSSSMLRTCT*FLSFHISTPSKTSS
Trigger: TGAGCTAGTTTTACTTGGAGTTGAGATGTGGAATGAAAGAAACCACGTGCAGGTACGTAGCATAGAAGAACTCCTAGATGAATTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACAGAAGTTTCATTTGCCTaGCTATCTCTTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTEVSFA*LSLLSV
Trigger: CACTGACAGAAGAGATAGCAAGGCAAATGAAACTTC...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp ACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGACATTTGACTTCTTTTCCTaGCGCATACACTTGGCAGTA +
Preference number: 5 (lower is better)
Translates to: TKITHGRTWEMEEDLIMTFDFFS*RIHLAV
Trigger: TACTGCCAAGTGTATGCGCAAGGAAAAGAAGTCAAA...TGTCATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS-3UTR CAA 90 bp CATACCAAGATAACACATGGTAGAACATGGGAAATGGAGGAAGATTTGATAATGTCATTGGTATCTTCTTaGTTTTCTGGGGTGGGAACT +
Preference number: 5 (lower is better)
Translates to: HTKITHGRTWEMEEDLIMSLVSS*FSGVGT
Trigger: AGTTCCCACCCCAGAAAACAAAGAAGATACCAATGA...CATTATCAAATCTTCCTCCATTTCCCATGTTCTACCATGTGTTATCTTGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 90 bp AAATTGTTGCACACACCTTTCATGTTGCATGTCTTAGGTGAACACTaGCTTCTCCAAATTGACTTACTGACACACTTCTTATTAATACAC +
Preference number: 5 (lower is better)
Translates to: KLLHTPFMLHVLGEH*LLQIDLLTHFLLIH
Trigger: GTGTATTAATAAGAAGTGTGTCAGTAAGTCAATTTGGAGAAGTCAGTGTTCACCTAAGACATGCAACATGAAAGGTGTGTGCAACAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp GTCAATACTCCCTCCAAGGCCACTTTTCAGGCAATGTaGTGGGTCCCACCCAAGGTTGCAGTGGCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: VNTPSKATFQAM*WVPPKVAVAVV
Trigger: CACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAGTGGCCTTGGAGGGAGTATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp CCACTTTTCAGGCAATGTGGTGGGTCCCACCCAAGGTaGCAGTGGCAGTGGTGTAAATTGTTGCACACACCT +
Preference number: 6 (lower is better)
Translates to: PLFRQCGGSHPR*QWQWCKLLHTP
Trigger: AGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 90 bp CCTCCAAGGCCACTTTTCAGGCAATGTGGTGGGTCCCACCCAAGGTaGCAGTGGCAGTGGTGTAAATTGTTGCACACACCTTTCATGTTG +
Preference number: 6 (lower is better)
Translates to: PPRPLFRQCGGSHPR*QWQWCKLLHTPFML
Trigger: CAACATGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAGTGGCCTTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp CACTTTTCAGGCAATGTGGTGGGTCCCACCCAAGGTTaGAGTGGCAGTGGTGTAAATTGTTGCACACACCTT +
Preference number: 6 (lower is better)
Translates to: HFSGNVVGPTQG*SGSGVNCCTHL
Trigger: AAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp AGCGCCATCTTTGAGGGTGCAGCTGGGCTTACAGCATaGATCATCTGCACAGCTTTTTGCAGATCCACAATC +
Preference number: 6 (lower is better)
Translates to: SAIFEGAAGLTA*IICTAFCRSTI
Trigger: GATTGTGGATCTGCAAAAAGCTGTGCAGATGATCCATGCTGTAAGCCCAGCTGCACCCTCAAAGATGGCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp TTCAGGCAATGTGGTGGGTCCCACCCAAGGTTGCAGTaGCAGTGGTGTAAATTGTTGCACACACCTTTCATG +
Preference number: 6 (lower is better)
Translates to: FRQCGGSHPRLQ*QWCKLLHTPFM
Trigger: CATGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTGCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp AGCTTGCCTCGGAGGATGCCTTTTGACTTCTTTTCCTaGCGCATACACTTGGCAGTAGCGTATGTAGCCCAG +
Preference number: 6 (lower is better)
Translates to: SLPRRMPFDFFS*RIHLAVAYVAQ
Trigger: CTGGGCTACATACGCTACTGCCAAGTGTATGCGCAAGGAAAAGAAGTCAAAAGGCATCCTCCGAGGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 72 bp CGTAAGGGTATCACTACTTCTGGGAGGCTGGTGTGCTaGGCATACCCAGTCAAGGGCCATGATGAAAGAATA +
Preference number: 6 (lower is better)
Translates to: RKGITTSGRLVC*AYPVKGHDERI
Trigger: TATTCTTTCATCATGGCCCTTGACTGGGTATGCTCAGCACACCAGCCTCCCAGAAGTAGTGATACCCTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp CAATGTGGTGGGTCCCACCCAAGGTTGCAGTGGCAGTaGTGTAAATTGTTGCACACACCTTTCATGTTGCAT +
Preference number: 6 (lower is better)
Translates to: QCGGSHPRLQWQ*CKLLHTPFMLH
Trigger: ATGCAACATGAAAGGTGTGTGCAACAATTTACACCACTGCCACTGCAACCTTGGGTGGGACCCACCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp TTTGAGGGTGCAGCTGGGCTTACAGCATGGATCATCTaGACAGCTTTTTGCAGATCCACAATCACACTGTTC +
Preference number: 6 (lower is better)
Translates to: FEGAAGLTAWII*TAFCRSTITLF
Trigger: GAACAGTGTGATTGTGGATCTGCAAAAAGCTGTGCAGATGATCCATGCTGTAAGCCCAGCTGCACCCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp GGGTCCACCATCCTTCATAGTGGCTTTGCATCAGAGTaGGGTTCTCATTCTGCTGAAGTTTCATTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: GSTILHSGFASE*GSHSAEVSFAL
Trigger: CAAGGCAAATGAAACTTCAGCAGAATGAGAACCCCACTCTGATGCAAAGCCACTATGAAGGATGGTGGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 90 bp CAGGTCAAGAAAACTCTTGTGGGTCCACCATCCTTCATAGTGGCTTaGCATCAGAGTGGGGTTCTCATTCTGCTGAAGTTTCATTTGCCT +
Preference number: 6 (lower is better)
Translates to: QVKKTLVGPPSFIVA*HQSGVLILLKFHLP
Trigger: AGGCAAATGAAACTTCAGCAGAATGAGAACCCCACTCTGATGCAAAGCCACTATGAAGGATGGTGGACCCACAAGAGTTTTCTTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CCA 72 bp GTGAGTCCAGTGTACAGTGGAATGGTCCCTCAAAAATaGAATGTGTGCTACGTTCTCACATTGAACTCTGCC +
Preference number: 6 (lower is better)
Translates to: VSPVYSGMVPQK*NVCYVLTLNSA
Trigger: GGCAGAGTTCAATGTGAGAACGTAGCACACATTCCATTTTTGAGGGACCATTCCACTGTACACTGGACTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp GAGTGGGGTTCTCATTCTGCTGAAGTTTCATTTGCCTaGCTATCTCTTCTGTCAGTGCACATCTCATGGGGA +
Preference number: 6 (lower is better)
Translates to: EWGSHSAEVSFA*LSLLSVHISWG
Trigger: TCCCCATGAGATGTGCACTGACAGAAGAGATAGCAAGGCAAATGAAACTTCAGCAGAATGAGAACCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp AGCTGGGCTTACAGCATGGATCATCTGCACAGCTTTTaGCAGATCCACAATCACACTGTTCTCCATCGTCAA +
Preference number: 6 (lower is better)
Translates to: SWAYSMDHLHSF*QIHNHTVLHRQ
Trigger: TTGACGATGGAGAACAGTGTGATTGTGGATCTGCAAAAAGCTGTGCAGATGATCCATGCTGTAAGCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp GTCCCTCAAAAATGGAATGTGTGCTACGTTCTCACATaGAACTCTGCCACAGAGGATGTCTGGGTCATGACA +
Preference number: 6 (lower is better)
Translates to: VPQKWNVCYVLT*NSATEDVWVMT
Trigger: TGTCATGACCCAGACATCCTCTGTGGCAGAGTTCAATGTGAGAACGTAGCACACATTCCATTTTTGAGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp GTTATGATAACGAATTCGCTCACGTTCAACAACCAATaGCAGGTCAAGAAAACTCTTGTGGGTCCACCATCC +
Preference number: 6 (lower is better)
Translates to: VMITNSLTFNNQ*QVKKTLVGPPS
Trigger: GGATGGTGGACCCACAAGAGTTTTCTTGACCTGGCATTGGTTGTTGAACGTGAGCGAATTCGTTATCATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp CAAAATTCATCTAGGAGTTCTTCTATGCTACGTACCTaGACGTGGTTTCTTTCATTCCACATCTCAACTCCA +
Preference number: 6 (lower is better)
Translates to: QNSSRSSSMLRT*TWFLSFHISTP
Trigger: TGGAGTTGAGATGTGGAATGAAAGAAACCACGTGCAGGTACGTAGCATAGAAGAACTCCTAGATGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp CCTTCCACATACAAAATTCATCTAGGAGTTCTTCTATaGTACGTACCTGCACGTGGTTTCTTTCATTCCACA +
Preference number: 6 (lower is better)
Translates to: PSTYKIHLGVLL*YVPARGFFHST
Trigger: TGTGGAATGAAAGAAACCACGTGCAGGTACGTAGCATAGAAGAACTCCTAGATGAATTTTGTATGTGGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS GCA 72 bp CCATTAAGCAAATCTTTCTTCCACATGTACATGAGCTaGTATCATGCTCCATACCCAGATTATGACCCATCT +
Preference number: 6 (lower is better)
Translates to: PLSKSFFHMYMS*YHAPYPDYDPS
Trigger: AGATGGGTCATAATCTGGGTATGGAGCATGATAGCAGCTCATGTACATGTGGAAGAAAGATTTGCTTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 72 bp CACACACCTTTCATGTTGCATGTCTTAGGTGAACACTaGCTTCTCCAAATTGACTTACTGACACACTTCTTA +
Preference number: 6 (lower is better)
Translates to: HTPFMLHVLGEH*LLQIDLLTHFL
Trigger: TAAGAAGTGTGTCAGTAAGTCAATTTGGAGAAGTCAGTGTTCACCTAAGACATGCAACATGAAAGGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS CAA 72 bp TCTGTTTCAGTGTTCATTACTTCATTGGTATCTTCTTaGTTTTCTGGGGTGGGAACTTTGGGTTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: SVSVFITSLVSS*FSGVGTLGSSL
Trigger: GAGTGAAGAACCCAAAGTTCCCACCCCAGAAAACAAAGAAGATACCAATGAAGTAATGAACACTGAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5
CDS TCA 72 bp GAAAGAATATTCAATATCTCTAGCCAGACGTACAGATaGGGTATCCTTGTGTATACCACAGCCTTATCCATA +
Preference number: 6 (lower is better)
Translates to: ERIFNISSQTYR*GILVYTTALSI
Trigger: TATGGATAAGGCTGTGGTATACACAAGGATACCTCATCTGTACGTCTGGCTAGAGATATTGAATATTCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096663.5