Pregenerated sensors for ADAM21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008438Ensembl transcript IDs: ENSMUST00000008582.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAACAGTAATATTGTTGTaGCCAAACTTAGTGCATAGG | + |
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Preference number: 3 (lower is better) Translates to: VTIFLIQMKREILSSSCKTVILL*PNLVHR Trigger: CCTATGCACTAAGTTTGGCAACAACAATATTACTGT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTGCACCCCTGGCCCTaGTGGTCACCTTCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSLHPWP*WSPSEG Trigger: TCCCTCTGAAGGTGACCAGCAGGGCCAGGGGTGCAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACCCATCCCCAAACAATaGCCAGTACTCCAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIPIPKQ*PVLQQV Trigger: CACCTGCTGGAGTACTGGCCATTGTTTGGGGATGGG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYSGPSL*EVNKGW Trigger: CCATCCCTTATTGACCTCTCACAGACTGGGTCCACT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATAGGAGAGCCACTCTaGATTCTTTGCACCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSIGEPL*ILCTPG Trigger: GCCAGGGGTGCAAAGAATTCAGAGTGGCTCTCCTAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAATTCTTTGCACCCCTaGCCCTGCTGGTCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYNSLHP*PCWSPS Trigger: TGAAGGTGACCAGCAGGGCCAGGGGTGCAAAGAATT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTCTACTTCTGGAGAACTaGGGTATTGAGTGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSLLLEN*GIEWTQ Trigger: CTGGGTCCACTCAATACCTCAGTTCTCCAGAAGTAG...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTGAGTACAGGGATGTaGGTAGAAACCAACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIVSTGM*VETNSF Trigger: GAAGCTGTTGGTTTCTACTCACATCCCTGTACTCAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTTCCCCCAAGAGCATaGATTTGCAGTCTTTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIVPPRA*ICSLCN Trigger: GTTGCAAAGACTGCAAATTCATGCTCTTGGGGGAAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACGGAGCCTGGGGATGGTaGATGTCTTCTACATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYGAWGW*MSSTFS Trigger: TGAAAATGTAGAAGACATTCACCATCCCCAGGCTCC...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAAAAGGACAGACAGACTaGCACACTTCTTGTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: VTIFLIQMKREILSSSCKKGQTD*HTSCVG Trigger: GCCTACACAAGAAGTGTGTCAGTCTGTCTGTCCTTT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAAGGAAGGCAAGCATTTaGAAGGACAGACAGACTGAC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIRKASI*KDRQTD Trigger: GTCAGTCTGTCTGTCCTTTCAAATGCTTGCCTTCCT...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAATACTGTGCCATCTGTaGCACAATGGCCAAACCTGT | + |
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Preference number: 4 (lower is better) Translates to: VTIFLIQMKREILSSSCKILCHL*HNGQTC Trigger: ACAGGTTTGGCCATTGTGGCACAGATGGCACAGTAT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTCTACTCCACAGGTGGTaGCATCTTTCACTTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSLLHRW*HLSLHQ Trigger: TTGGTGAAGTGAAAGATGGCACCACCTGTGGAGTAG...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACCATCTGTGCCACAATaGCCAAACCTGTTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIPSVPQ*PNLFPC Trigger: ACAAGGAAACAGGTTTGGCCATTGTGGCACAGATGG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTCTTGACTCGCATATaGACAACATGTCTACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSFLTRI*TTCLRP Trigger: TGGCCGTAGACATGTTGTCCATATGCGAGTCAAGAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATATCAACTCCAAAGGGTTaGTACAGTAGTCTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTISTPKG*YSSLFS Trigger: GGAGAAGAGACTACTGTACCAACCCTTTGGAGTTGA...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGGTGAATCTCTCTGCTaGCACTCTGAAAGTACTCAT | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSGESLC*HSESTH Trigger: ATGAGTACTTTCAGAGTGCCAGCAGAGAGATTCACC...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATATACATATCCATCTTCTaGGCACTGGTGAGATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIYISIF*ALVRCS Trigger: GGAACATCTCACCAGTGCCCAGAAGATGGATATGTA...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAAAACCAACAGCTTCTTaGCTCGCATATGGACAACAT | + |
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Preference number: 4 (lower is better) Translates to: VTIFLIQMKREILSSSCKKPTAS*LAYGQH Trigger: ATGTTGTCCATATGCGAGTCAAGAAGCTGTTGGTTT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAACAGGCACAGTTATTaGCAGGACAGTGATAATGAC | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSNRHSY*QDSDND Trigger: GTCATTATCACTGTCCTGTCAATAACTGTGCCTGTT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATTGGTGAATCTCTCTaGTGGCACTCTGAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSIGESL*WHSEST Trigger: AGTACTTTCAGAGTGCCAGCAGAGAGATTCACCAAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATAGCAATTATGAGATaGGCTTCTTGCACCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSIAIMR*ASCTFA Trigger: GGCAAAGGTGCAAGAAGCGCATCTCATAATTGCTAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| 3UTR CAA 72 bp | CTCAGAAATATGCCCAGATTCATACATACAGTAATATaGTTGTTGCCAAACTTAGTGCATAGGCGGCTATTA | + |
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Preference number: 4 (lower is better) Translates to: LRNMPRFIHTVI*LLPNLVHRRLL Trigger: TAATAGCCGCCTATGCACTAAGTTTGGCAACAACAATATTACTGTATGTATGAATCTGGGCATATTTCTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAATTTTGCTTCATAGCTaGCTTCTTAGCCTCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIILLHS*LLSLFN Trigger: GTTGAAGAGGCTAAGAAGTCAGCTATGAAGCAAAAT...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACAGGATTCCTCATCATaGTTCATACCAAAAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIQDSSS*FIPKVW Trigger: CCATACTTTTGGTATGAAGCATGATGAGGAATCCTG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAAACAACAGGGATCTTaGTCACATTCCTGTACAGAT | + |
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Preference number: 4 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYKQQGS*SHSCTD Trigger: ATCTGTACAGGAATGTGAGCAAGATCCCTGTTGTTT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAGGGATAACTACTTCTaGAGAACTGAGGTATTGAGT | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSRDNYF*RTEVLS Trigger: ACTCAATACCTCAGTTCTCCAGAAGTAGTTATCCCT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTTGACAAGTTTTGTTaGGCGTTAGTGAAGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSFDKFC*ALVKKP Trigger: TGGTTTCTTCACTAACGCTCAACAAAACTTGTCAAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR TCA 90 bp | AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTACCTGAGAAAGACTaGTTTGTTTCCAATGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RINNSQEHIKNYLCLVTIVPEKD*FVSNEK Trigger: TTTCTCATTGGAAACAAATCAGTCTTTCTCAGGTAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR GCA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAACACATCTGACATTCTaGATTTTAGGAATACTGTGC | + |
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Preference number: 4 (lower is better) Translates to: VTIFLIQMKREILSSSCKTHLTF*ILGILC Trigger: GCACAGTATTCCTAAAATGCAGAATGTCAGATGTGT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CCA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACGCAGACAAATTAGGATaGATAAAACAGGCACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYADKLG*IKQAQL Trigger: TAACTGTGCCTGTTTTATCCATCCTAATTTGTCTGC...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS TCA 90 bp | CATCAGGCACACCCATCCCCAAACAATGGCCAGTACTCCAGCAGGTaGTACCATTGGCATAAATGTTCTGCAAAACATAAGGAGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: HQAHPSPNNGQYSSR*YHWHKCSAKHKEPG Trigger: CCCAGGCTCCTTATGTTTTGCAGAACATTTATGCCAATGGTATCACCTGCTGGAGTACTGGCCATTGTTTGGGGATGGGTGTGCCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS TCA 90 bp | GATAACTACTTCTGGAGAACTGAGGTATTGAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGGAAGTGCCTTAAGCCAGAGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: DNYFWRTEVLSGPSL*EVNKGWKCLKPEQQ Trigger: TTGCTGCTCTGGCTTAAGGCACTTCCATCCCTTATTGACCTCTCACAGACTGGGTCCACTCAATACCTCAGTTCTCCAGAAGTAGTTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CAA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGCCACTCTGAATTCTTaGCACCCCTGGCCCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSATLNS*HPWPCW Trigger: CCAGCAGGGCCAGGGGTGCAAAGAATTCAGAGTGGC...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CAA 90 bp | TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAAAACAACAGGGATCTaGCTCACATTCCTGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: YFHLPVNSQKYAQIHTYSKTTGI*LTFLYR Trigger: TCTGTACAGGAATGTGAGCAAGATCCCTGTTGTTTT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CAA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACTATGAGATGCGCTTCTaGCACCTTTGCCAAAAATCT | + |
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Preference number: 5 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYYEMRF*HLCQKS Trigger: AGATTTTTGGCAAAGGTGCAAGAAGCGCATCTCATA...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CAA 90 bp | GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAGATGTATGTTTTCCATaGGGAGAACATTTCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: VTIFLIQMKREILSSSCKDVCFP*GEHFLD Trigger: ATCGAGGAAATGTTCTCCCAATGGAAAACATACATC...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS-3UTR CAA 90 bp | AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAATGACTCTTCTTTTTaGAGATGTTGGACCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: RYFHLPVNSQKYAQIHTYNDSSF*RCWTTV Trigger: GACAGTGGTCCAACATCTCAAAAAAGAAGAGTCATT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS TCA 72 bp | TTCTGGAGAACTGAGGTATTGAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGGAAGTGCCTTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: FWRTEVLSGPSL*EVNKGWKCLKP Trigger: TGGCTTAAGGCACTTCCATCCCTTATTGACCTCTCACAGACTGGGTCCACTCAATACCTCAGTTCTCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS CCA 72 bp | ATAGCTGACTTCTTAGCCTCTTCAACTCCAAAGGGTTaGTACAGTAGTCTCTTCTCCGTTAAACTACATAGC | + |
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Preference number: 6 (lower is better) Translates to: IADFLASSTPKG*YSSLFSVKLHS Trigger: GCTATGTAGTTTAACGGAGAAGAGACTACTGTACCAACCCTTTGGAGTTGAAGAGGCTAAGAAGTCAGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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| CDS TCA 72 bp | TCCTGCAATGTAGGCTATACCAAGTACACTTATAAGTaGGCTTCTAATGAAGATATGGGCTGCATCATGATG | + |
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Preference number: 6 (lower is better) Translates to: SCNVGYTKYTYK*ASNEDMGCIMM Trigger: CATCATGATGCAGCCCATATCTTCATTAGAAGCTCACTTATAAGTGTACTTGGTATAGCCTACATTGCAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008582.4 |
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