RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAM21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000008438

Ensembl transcript IDs: ENSMUST00000008582.4

Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAACAGTAATATTGTTGTaGCCAAACTTAGTGCATAGG +
Preference number: 3 (lower is better)
Translates to: VTIFLIQMKREILSSSCKTVILL*PNLVHR
Trigger: CCTATGCACTAAGTTTGGCAACAACAATATTACTGT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTGCACCCCTGGCCCTaGTGGTCACCTTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSLHPWP*WSPSEG
Trigger: TCCCTCTGAAGGTGACCAGCAGGGCCAGGGGTGCAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACCCATCCCCAAACAATaGCCAGTACTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIPIPKQ*PVLQQV
Trigger: CACCTGCTGGAGTACTGGCCATTGTTTGGGGATGGG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYSGPSL*EVNKGW
Trigger: CCATCCCTTATTGACCTCTCACAGACTGGGTCCACT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATAGGAGAGCCACTCTaGATTCTTTGCACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSIGEPL*ILCTPG
Trigger: GCCAGGGGTGCAAAGAATTCAGAGTGGCTCTCCTAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAATTCTTTGCACCCCTaGCCCTGCTGGTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYNSLHP*PCWSPS
Trigger: TGAAGGTGACCAGCAGGGCCAGGGGTGCAAAGAATT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTCTACTTCTGGAGAACTaGGGTATTGAGTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSLLLEN*GIEWTQ
Trigger: CTGGGTCCACTCAATACCTCAGTTCTCCAGAAGTAG...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTGAGTACAGGGATGTaGGTAGAAACCAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIVSTGM*VETNSF
Trigger: GAAGCTGTTGGTTTCTACTCACATCCCTGTACTCAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTTCCCCCAAGAGCATaGATTTGCAGTCTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIVPPRA*ICSLCN
Trigger: GTTGCAAAGACTGCAAATTCATGCTCTTGGGGGAAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACGGAGCCTGGGGATGGTaGATGTCTTCTACATTTTCA +
Preference number: 4 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYGAWGW*MSSTFS
Trigger: TGAAAATGTAGAAGACATTCACCATCCCCAGGCTCC...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAAAAGGACAGACAGACTaGCACACTTCTTGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VTIFLIQMKREILSSSCKKGQTD*HTSCVG
Trigger: GCCTACACAAGAAGTGTGTCAGTCTGTCTGTCCTTT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAAGGAAGGCAAGCATTTaGAAGGACAGACAGACTGAC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIRKASI*KDRQTD
Trigger: GTCAGTCTGTCTGTCCTTTCAAATGCTTGCCTTCCT...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAATACTGTGCCATCTGTaGCACAATGGCCAAACCTGT +
Preference number: 4 (lower is better)
Translates to: VTIFLIQMKREILSSSCKILCHL*HNGQTC
Trigger: ACAGGTTTGGCCATTGTGGCACAGATGGCACAGTAT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTCTACTCCACAGGTGGTaGCATCTTTCACTTCACCAA +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSLLHRW*HLSLHQ
Trigger: TTGGTGAAGTGAAAGATGGCACCACCTGTGGAGTAG...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACCATCTGTGCCACAATaGCCAAACCTGTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIPSVPQ*PNLFPC
Trigger: ACAAGGAAACAGGTTTGGCCATTGTGGCACAGATGG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTCTTGACTCGCATATaGACAACATGTCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSFLTRI*TTCLRP
Trigger: TGGCCGTAGACATGTTGTCCATATGCGAGTCAAGAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATATCAACTCCAAAGGGTTaGTACAGTAGTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTISTPKG*YSSLFS
Trigger: GGAGAAGAGACTACTGTACCAACCCTTTGGAGTTGA...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGGTGAATCTCTCTGCTaGCACTCTGAAAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSGESLC*HSESTH
Trigger: ATGAGTACTTTCAGAGTGCCAGCAGAGAGATTCACC...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATATACATATCCATCTTCTaGGCACTGGTGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIYISIF*ALVRCS
Trigger: GGAACATCTCACCAGTGCCCAGAAGATGGATATGTA...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAAAACCAACAGCTTCTTaGCTCGCATATGGACAACAT +
Preference number: 4 (lower is better)
Translates to: VTIFLIQMKREILSSSCKKPTAS*LAYGQH
Trigger: ATGTTGTCCATATGCGAGTCAAGAAGCTGTTGGTTT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAACAGGCACAGTTATTaGCAGGACAGTGATAATGAC +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSNRHSY*QDSDND
Trigger: GTCATTATCACTGTCCTGTCAATAACTGTGCCTGTT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATTGGTGAATCTCTCTaGTGGCACTCTGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSIGESL*WHSEST
Trigger: AGTACTTTCAGAGTGCCAGCAGAGAGATTCACCAAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTATAGCAATTATGAGATaGGCTTCTTGCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSIAIMR*ASCTFA
Trigger: GGCAAAGGTGCAAGAAGCGCATCTCATAATTGCTAT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
3UTR CAA 72 bp CTCAGAAATATGCCCAGATTCATACATACAGTAATATaGTTGTTGCCAAACTTAGTGCATAGGCGGCTATTA +
Preference number: 4 (lower is better)
Translates to: LRNMPRFIHTVI*LLPNLVHRRLL
Trigger: TAATAGCCGCCTATGCACTAAGTTTGGCAACAACAATATTACTGTATGTATGAATCTGGGCATATTTCTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAATTTTGCTTCATAGCTaGCTTCTTAGCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIILLHS*LLSLFN
Trigger: GTTGAAGAGGCTAAGAAGTCAGCTATGAAGCAAAAT...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATACAGGATTCCTCATCATaGTTCATACCAAAAGTATGG +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIQDSSS*FIPKVW
Trigger: CCATACTTTTGGTATGAAGCATGATGAGGAATCCTG...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAAACAACAGGGATCTTaGTCACATTCCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYKQQGS*SHSCTD
Trigger: ATCTGTACAGGAATGTGAGCAAGATCCCTGTTGTTT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAGGGATAACTACTTCTaGAGAACTGAGGTATTGAGT +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSRDNYF*RTEVLS
Trigger: ACTCAATACCTCAGTTCTCCAGAAGTAGTTATCCCT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTTTTGACAAGTTTTGTTaGGCGTTAGTGAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSFDKFC*ALVKKP
Trigger: TGGTTTCTTCACTAACGCTCAACAAAACTTGTCAAA...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR TCA 90 bp AGAATAAATAACAGCCAAGAACACATTAAGAATTACCTGTGCCTGGTGACAATAGTACCTGAGAAAGACTaGTTTGTTTCCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: RINNSQEHIKNYLCLVTIVPEKD*FVSNEK
Trigger: TTTCTCATTGGAAACAAATCAGTCTTTCTCAGGTAC...TATTGTCACCAGGCACAGGTAATTCTTAATGTGTTCTTGGCTGTTATTTATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR GCA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAACACATCTGACATTCTaGATTTTAGGAATACTGTGC +
Preference number: 4 (lower is better)
Translates to: VTIFLIQMKREILSSSCKTHLTF*ILGILC
Trigger: GCACAGTATTCCTAAAATGCAGAATGTCAGATGTGT...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CCA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACGCAGACAAATTAGGATaGATAAAACAGGCACAGTTA +
Preference number: 4 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYADKLG*IKQAQL
Trigger: TAACTGTGCCTGTTTTATCCATCCTAATTTGTCTGC...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS TCA 90 bp CATCAGGCACACCCATCCCCAAACAATGGCCAGTACTCCAGCAGGTaGTACCATTGGCATAAATGTTCTGCAAAACATAAGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: HQAHPSPNNGQYSSR*YHWHKCSAKHKEPG
Trigger: CCCAGGCTCCTTATGTTTTGCAGAACATTTATGCCAATGGTATCACCTGCTGGAGTACTGGCCATTGTTTGGGGATGGGTGTGCCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS TCA 90 bp GATAACTACTTCTGGAGAACTGAGGTATTGAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGGAAGTGCCTTAAGCCAGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: DNYFWRTEVLSGPSL*EVNKGWKCLKPEQQ
Trigger: TTGCTGCTCTGGCTTAAGGCACTTCCATCCCTTATTGACCTCTCACAGACTGGGTCCACTCAATACCTCAGTTCTCCAGAAGTAGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CAA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTGCCACTCTGAATTCTTaGCACCCCTGGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSATLNS*HPWPCW
Trigger: CCAGCAGGGCCAGGGGTGCAAAGAATTCAGAGTGGC...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CAA 90 bp TACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAGTAAAACAACAGGGATCTaGCTCACATTCCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: YFHLPVNSQKYAQIHTYSKTTGI*LTFLYR
Trigger: TCTGTACAGGAATGTGAGCAAGATCCCTGTTGTTTT...ACTGTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CAA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACTATGAGATGCGCTTCTaGCACCTTTGCCAAAAATCT +
Preference number: 5 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYYEMRF*HLCQKS
Trigger: AGATTTTTGGCAAAGGTGCAAGAAGCGCATCTCATA...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CAA 90 bp GTGACAATATTTCTGATACAGATGAAGAGGGAGATACTTTCATCTTCCTGTAAAGATGTATGTTTTCCATaGGGAGAACATTTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: VTIFLIQMKREILSSSCKDVCFP*GEHFLD
Trigger: ATCGAGGAAATGTTCTCCCAATGGAAAACATACATC...TTTACAGGAAGATGAAAGTATCTCCCTCTTCATCTGTATCAGAAATATTGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS-3UTR CAA 90 bp AGATACTTTCATCTTCCTGTAAACTCTCAGAAATATGCCCAGATTCATACATACAATGACTCTTCTTTTTaGAGATGTTGGACCACTGTC +
Preference number: 5 (lower is better)
Translates to: RYFHLPVNSQKYAQIHTYNDSSF*RCWTTV
Trigger: GACAGTGGTCCAACATCTCAAAAAAGAAGAGTCATT...GTATGTATGAATCTGGGCATATTTCTGAGAGTTTACAGGAAGATGAAAGTATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS TCA 72 bp TTCTGGAGAACTGAGGTATTGAGTGGACCCAGTCTGTaGGAGGTCAATAAGGGATGGAAGTGCCTTAAGCCA +
Preference number: 6 (lower is better)
Translates to: FWRTEVLSGPSL*EVNKGWKCLKP
Trigger: TGGCTTAAGGCACTTCCATCCCTTATTGACCTCTCACAGACTGGGTCCACTCAATACCTCAGTTCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS CCA 72 bp ATAGCTGACTTCTTAGCCTCTTCAACTCCAAAGGGTTaGTACAGTAGTCTCTTCTCCGTTAAACTACATAGC +
Preference number: 6 (lower is better)
Translates to: IADFLASSTPKG*YSSLFSVKLHS
Trigger: GCTATGTAGTTTAACGGAGAAGAGACTACTGTACCAACCCTTTGGAGTTGAAGAGGCTAAGAAGTCAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4
CDS TCA 72 bp TCCTGCAATGTAGGCTATACCAAGTACACTTATAAGTaGGCTTCTAATGAAGATATGGGCTGCATCATGATG +
Preference number: 6 (lower is better)
Translates to: SCNVGYTKYTYK*ASNEDMGCIMM
Trigger: CATCATGATGCAGCCCATATCTTCATTAGAAGCTCACTTATAAGTGTACTTGGTATAGCCTACATTGCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000008582.4