Pregenerated sensors for ADAM1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062438Ensembl transcript IDs: ENSMUST00000079368.5
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AACACCTGTCCATTGAACACTAGTGACAGACGGCTCCTTCCTCCCTaGCCCACTGAGAGTGGCAGCTTCCCACAGCTTCTGCTTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: NTCPLNTSDRRLLPP*PTESGSFPQLLLPG Trigger: TCCAGGAAGCAGAAGCTGTGGGAAGCTGCCACTCTCAGTGGGCAAGGGAGGAAGGAGCCGTCTGTCACTAGTGTTCAATGGACAGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| 3UTR-3UTR GCA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGGCTTCCCACAGCTTCTaGTTCCTGGAGACTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRASHSF*FLETHS Trigger: AGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGC...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| 3UTR TCA 72 bp | CAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTaGGAGGCTCGGCTACTTATTGGCTTTATCTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: QLLLPGDSFSGL*EARLLIGFISP Trigger: GGGGGAGATAAAGCCAATAAGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| 3UTR-3UTR CAA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGCGGCTCCTTCCTCCCTaGCCCACTGAGAGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRRLLPP*PTESGS Trigger: GCTGCCACTCTCAGTGGGCAAGGGAGGAAGGAGCCG...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| 3UTR CAA 72 bp | CCATTGAACACTAGTGACAGACGGCTCCTTCCTCCCTaGCCCACTGAGAGTGGCAGCTTCCCACAGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLNTSDRRLLPP*PTESGSFPQLL Trigger: CAGAAGCTGTGGGAAGCTGCCACTCTCAGTGGGCAAGGGAGGAAGGAGCCGTCTGTCACTAGTGTTCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | CCACTGAGAGTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGCAGTGCCTTCCTCTTTaGAGTCGGGAGGTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PLRVAASHSFCFLETHSQQCLPL*SREVQS Trigger: GCTTTGCACCTCCCGACTGCAAAGAGGAAGGCACTG...CTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCACTCTCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGTGCTGCTTCTTCGTTTaGCTCTTCTGCTCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VAASHSFCFLETHSQGCECCFFV*LFCSFL Trigger: GAGGAAGGAGCAGAAGAGGCAAACGAAGAAGCAGCA...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CCACTGAGAGTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGTTCGGTTGGATTTGTaGCAGGAAGGCCACCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLRVAASHSFCFLETHSQVRLDL*QEGHLC Trigger: ACAGAGGTGGCCTTCCTGCCACAAATCCAACCGAAC...CTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCACTCTCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAAAATACGAGAGCACTaGAAGGTAGGGTCCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: VAASHSFCFLETHSQGCEKIREH*KVGSMH Trigger: GTGCATGGACCCTACCTTTCAGTGCTCTCGTATTTT...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR TCA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTGGACTGCTGTCATTTaGCAGATTAACAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TASASWRLILRAVRGSATWTAVI*QINSRA Trigger: GGCCCTGCTGTTAATCTGTCAAATGACAGCAGTCCA...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTAGCAAGTTGTTCGGTTaGATTTGTGGCAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TASASWRLILRAVRGSATSKLFG*ICGRKA Trigger: GGCCTTCCTGCCACAAATCCAACCGAACAACTTGCT...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR TCA 90 bp | CCACTGAGAGTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGTAGGGTCCATGCACTaGCCATTAAAGCACAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PLRVAASHSFCFLETHSQVGSMH*PLKHKK Trigger: CTTCTTGTGCTTTAATGGTCAGTGCATGGACCCTAC...CTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCACTCTCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR TCA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTGGACTACAGGGAAATaGGAATGGAGTGAAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TASASWRLILRAVRGSATWTTGK*EWSEVL Trigger: GAGGACTTCACTCCATTCTCATTTCCCTGTAGTCCA...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGGTCTTTCTTTTCTGCTaGTGCTTCTTCGTTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VAASHSFCFLETHSQGCEVFLFC*CFFVCL Trigger: GAGGCAAACGAAGAAGCAGCAGCAGAAAAGAAAGAC...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | CCACTGAGAGTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGTTTTATCACAGTCACTaGCACAGTCACACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLRVAASHSFCFLETHSQFYHSH*HSHTAP Trigger: TGGAGCAGTGTGACTGTGGCAGTGACTGTGATAAAA...CTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCACTCTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGGCTTGTTGCATTGTTTaGTTGGACTACAGGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: VAASHSFCFLETHSQGCEACCIV*LDYREM Trigger: CATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGC...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTCTTCTACTGCTCCTTaGTCTTCTGCTTCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TASASWRLILRAVRGSATSSTAP*SSASSF Trigger: GAAGGAAGAAGCAGAAGAGCAAGGAGCAGTAGAAGA...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGCAATGTCACAGAACGTaGTCGGGAGAAAAATTATTG | + |
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Preference number: 4 (lower is better) Translates to: VAASHSFCFLETHSQGCEQCHRT*SGEKLL Trigger: CAATAATTTTTCTCCCGAGCACGTTCTGTGACATTG...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | TGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTATTGGCTTCATTGCACACCCCGTaGTTGTTGCATTGTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: CFLETHSQGCERLGYLLASLHTP*LLHCLL Trigger: AAGCAAACAATGCAACAAGCACGGGGTGTGCAATGA...AGCCAATAAGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | TGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTATTGGCTTGCTGCACACTGAGTTaGCCTTCAGTTTACAATTTT | + |
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Preference number: 4 (lower is better) Translates to: CFLETHSQGCERLGYLLACCTLS*PSVYNF Trigger: AAAATTGTAAACTGAAGGGCAACTCAGTGTGCAGCA...AGCCAATAAGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGCCACACTGCCCCCAGTaGCTTCCTCTTTGCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRPHCPQ*LPLCSR Trigger: CCGACTGCAAAGAGGAAGGCACTGGGGGCAGTGTGG...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATGGGCTTTCCTGTCACTaGGACATGCTGCAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYGLSCH*DMLQRS Trigger: GGACCTCTGCAGCATGTCCCAGTGACAGGAAAGCCC...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATGGTAGGACCTCCTCCTaGTCTTCCTTCTCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYGRTSS*SSFSPS Trigger: AGAAGGGGAGAAGGAAGAGCAGGAGGAGGTCCTACC...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATCACTTAGAGCCGTCCTaGGCTTTCCTGTCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYHLEPS*AFLSLG Trigger: TCCCAGTGACAGGAAAGCCCAGGACGGCTCTAAGTG...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGTCGGTCTCAGGGACCTaGAGCAGCAAGTTGTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRSVSGT*SSKLFG Trigger: ACCGAACAACTTGCTGCTCCAGGTCCCTGAGACCGA...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAAGCCGAAGGAGCAGTaGCAGTTCCCCAGGTCATTG | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYKPKEQ*QFPRSL Trigger: CAATGACCTGGGGAACTGCCACTGCTCCTTCGGCTT...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR TCA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGTTCAGTGCTGCACACTaGGTTGCCCTTCAGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRFSAAH*VALQFT Trigger: TGTAAACTGAAGGGCAACTCAGTGTGCAGCACTGAA...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGAGCAAAGTTCAGTGCTaGACACTGAGTTGCCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRSKVQC*TLSCPS Trigger: TGAAGGGCAACTCAGTGTGCAGCACTGAACTTTGCT...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATTTCGTTTGCCTCTTCTaGTCCTTCCTCTTCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYFVCLF*SFLFYC Trigger: GCAGTAGAAGAGGAAGGAGCAGAAGAGGCAAACGAA...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATCCACAGTTTCCAAACTaGTCTCCTCTCGAGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYPQFPN*SPLEFR Trigger: TCTGAACTCGAGAGGAGACCAGTTTGGAAACTGTGG...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR GCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATCGGGAGAAAAATTATTaGCAAGAGCAACATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYREKNY*QEQHGH Trigger: GTGGCCATGTTGCTCTTGGCAATAATTTTTCTCCCG...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CCA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATTTCACGTATTCCTCATaGAGGGAATCTCTCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYFTYSS*RESLMS Trigger: TGACATGAGAGATTCCCTCCATGAGGAATACGTGAA...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | TCCACCACACCATTCCCACAATTGGCAGCTCTGCGCATGCGGCTCTaGCGCCCAGGCTCATCAAGCAGGCACACCCCTCTGTGGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: STTPFPQLAALRMRL*RPGSSSRHTPLWSW Trigger: CCACGACCACAGAGGGGTGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | CCAAGTCCTCCACCACACCATTCCCACAATTGGCAGCTCTGCGCATaGGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACACCCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSPPPHHSHNWQLCA*GSGAQAHQAGTPLC Trigger: ACAGAGGGGTGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGAGGACTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | ACTGCTCCAAGTCCTCCACCACACCATTCCCACAATTGGCAGCTCTaGGCATGCGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACACCC | + |
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Preference number: 5 (lower is better) Translates to: TAPSPPPHHSHNWQL*ACGSGAQAHQAGTP Trigger: GGGTGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGAGGACTTGGAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | ATGCGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACACCCCTCTGTaGTCGTGGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MRLWRPGSSSRHTPL*SWRKRRKWSELQLL Trigger: CAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCACGACCACAGAGGGGTGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | CTCTGGCGCCCAGGCTCATCAAGCAGGCACACCCCTCTGTGGTCGTaGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTGCTGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LWRPGSSSRHTPLWS*RKRRKWSELQLLKP Trigger: TGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCACGACCACAGAGGGGTGTGCCTGCTTGATGAGCCTGGGCGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | GTGGCACTTAGAGCCGTCCTGGGCTTTCCTGTCACTGGGACATGCTaGAGAGGTCCCATTGCAGTATTCTTCCAGGTCACATGGTCCGTC | + |
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Preference number: 5 (lower is better) Translates to: VALRAVLGFPVTGTC*RGPIAVFFQVTWSV Trigger: GACGGACCATGTGACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCCAGTGACAGGAAAGCCCAGGACGGCTCTAAGTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | CGGGAGGTGCAAAGCCGAAGGAGCAGTGGCAGTTCCCCAGGTCATTaGACACCCCGTGCTTGTTGCATTGTTTGCTTGGACTACAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: REVQSRRSSGSSPGH*TPRACCIVCLDYRE Trigger: TTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTCCTTCGGCTTTGCACCTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | TCAAGCAGGCACACCCCTCTGTGGTCGTGGAGGAAACGGAGGAAGTaGTCAGAGCTGCAGTTGCTGAAGCCACTGTCCTTACCGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSRHTPLWSWRKRRK*SELQLLKPLSLPIF Trigger: GAAGATCGGTAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCACGACCACAGAGGGGTGTGCCTGCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGGCTGCAGAGGTCCCATaGCAGTATTCTTCCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VAASHSFCFLETHSQGCEAAEVP*QYSSRS Trigger: TGACCTGGAAGAATACTGCAATGGGACCTCTGCAGC...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTGTTGTTCGGTTGGATTaGTGGCAGGAAGGCCACCTC | + |
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Preference number: 5 (lower is better) Translates to: TASASWRLILRAVRGSATVVRLD*WQEGHL Trigger: GAGGTGGCCTTCCTGCCACAAATCCAACCGAACAAC...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | GTGGCAGCTTCCCACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGCCCGTGCTTGTTGCATaGTTTGCTTGGACTACAGGG | + |
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Preference number: 5 (lower is better) Translates to: VAASHSFCFLETHSQGCEPVLVA*FAWTTG Trigger: CCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGG...CTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGTGGGAAGCTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | CACCAGTCCTCGGTCTCAGGGACCTGGAGCAGCAAGTTGTTCGGTTaGATTTGTGGCAGGAAGGCCACCTCTGTACATATAAGTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: HQSSVSGTWSSKLFG*ICGRKATSVHISFP Trigger: TGGGAAACTTATATGTACAGAGGTGGCCTTCCTGCCACAAATCCAACCGAACAACTTGCTGCTCCAGGTCCCTGAGACCGAGGACTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTTGCACACCCCGTGCTaGTTGCATTGTTTGCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: TASASWRLILRAVRGSATLHTPC*LHCLLG Trigger: TCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAA...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | TGCTGCTGCTTCTTCGTTTGCCTCTTCTGCTCCTTCCTCTTCTACTaGTCCTTGCTCTTCTGCTTCTTCCTTCCCATACTCCAACTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CCCFFVCLFCSFLFY*SLLFCFFLPILQLL Trigger: GAGGAGTTGGAGTATGGGAAGGAAGAAGCAGAAGAGCAAGGAGCAGTAGAAGAGGAAGGAGCAGAAGAGGCAAACGAAGAAGCAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTTCGGGAGAAAAATTATaGCCAAGAGCAACATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: TASASWRLILRAVRGSATSGEKL*PRATWP Trigger: TGGCCATGTTGCTCTTGGCAATAATTTTTCTCCCGA...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | GGGACATGCTGCAGAGGTCCCATTGCAGTATTCTTCCAGGTCACATaGTCCGTCAGCAGGACGGCAAACATCTCCTTCCTTTTTAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GTCCRGPIAVFFQVT*SVSRTANISFLFKV Trigger: AACTTTAAAAAGGAAGGAGATGTTTGCCGTCCTGCTGACGGACCATGTGACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | AGGACGATCAGCTTTAAGTTAAGGATCAGCTCCTCTGTGCTGGATTaGGTGGAGTTCGGCCCTGGACTGCTGTCATTTGACAGATTAACA | + |
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Preference number: 5 (lower is better) Translates to: RTISFKLRISSSVLD*VEFGPGLLSFDRLT Trigger: TGTTAATCTGTCAAATGACAGCAGTCCAGGGCCGAACTCCACCCAATCCAGCACAGAGGAGCTGATCCTTAACTTAAAGCTGATCGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCTGCTTCCTGGAGACTCATTCTCAGGGCTGTGAGAGGCTCGGCTACTACTTGGTATACTTTTTaGGAAATTGAGAGGAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: TASASWRLILRAVRGSATTWYTF*EIERRS Trigger: GCTCCTCCTCTCAATTTCCAAAAAAGTATACCAAGT...AGTAGCCGAGCCTCTCACAGCCCTGAGAATGAGTCTCCAGGAAGCAGAAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | ATATACAGATCCAATGTCACAGAACGTGCTCGGGAGAAAAATTATTaGCAAGAGCAACATGGCCACCAGCCTGATACACCAGTGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: IYRSNVTERAREKNY*QEQHGHQPDTPVLW Trigger: CCAGAGCACTGGTGTATCAGGCTGGTGGCCATGTTGCTCTTGGCAATAATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 90 bp | CTGCACACTGAGTTGCCCTTCAGTTTACAATTTTCATCACAACACTaGCTTTTATCACAGTCACTGCCACAGTCACACTGCTCCAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LHTELPFSLQFSSQH*LLSQSLPQSHCSKS Trigger: GGACTTGGAGCAGTGTGACTGTGGCAGTGACTGTGATAAAAGCCAGTGTTGTGATGAAAATTGTAAACTGAAGGGCAACTCAGTGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS TCA 90 bp | GCACACCCCGTGCTTGTTGCATTGTTTGCTTGGACTACAGGGAAATaGGAATGGAGTGAAGTCCTCACAAATGGAATTTTTACAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: AHPVLVALFAWTTGK*EWSEVLTNGIFTDF Trigger: AAAGTCTGTAAAAATTCCATTTGTGAGGACTTCACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 90 bp | CAGTTTCATAGGAAGAATTATATACAGATCCAATGTCACAGAACGTaGTCGGGAGAAAAATTATTGCCAAGAGCAACATGGCCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QFHRKNYIQIQCHRT*SGEKLLPRATWPPA Trigger: GGCTGGTGGCCATGTTGCTCTTGGCAATAATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTATATAATTCTTCCTATGAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGCTGCTGCTTCTTCGTTaGCCTCTTCTGCTCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRLLLLR*PLLLLP Trigger: AGGAAGGAGCAGAAGAGGCAAACGAAGAAGCAGCAG...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGAATCGGAGGCAGACCTaGAACCATGCCCAAAAATAC | + |
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Preference number: 5 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRNRRQT*NHAQKY Trigger: GTATTTTTGGGCATGGTTCAAGGTCTGCCTCCGATT...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | GTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATAGGCTCTTCTACTGCTCCTaGCTCTTCTGCTTCTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VTKRSAQRYKNKNIQSYRLFYCS*LFCFFL Trigger: AAGGAAGAAGCAGAAGAGCAAGGAGCAGTAGAAGAG...CCTATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS TCA 90 bp | GCTTGTTGCATTGTTTGCTTGGACTACAGGGAAATGAGAATGGAGTaGAGTCCTCACAAATGGAATTTTTACAGACTTTATCTTTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ACCIVCLDYREMRME*SPHKWNFYRLYLCH Trigger: GTGGCAAAGATAAAGTCTGTAAAAATTCCATTTGTGAGGACTTCACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS-3UTR CAA 90 bp | CTGGTGACTAAAAGATCAGCCCAAAGATACAAGAACAAGAATATCCAAAGCTATGTGCTGCACACTGAGTaGCCCTTCAGTTTACAATTT | + |
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Preference number: 5 (lower is better) Translates to: LVTKRSAQRYKNKNIQSYVLHTE*PFSLQF Trigger: AAATTGTAAACTGAAGGGCAACTCAGTGTGCAGCAC...ATAGCTTTGGATATTCTTGTTCTTGTATCTTTGGGCTGATCTTTTAGTCACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | CCAGGCTCATCAAGCAGGCACACCCCTCTGTGGTCGTaGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PGSSSRHTPLWS*RKRRKWSELQL Trigger: CAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCACGACCACAGAGGGGTGTGCCTGCTTGATGAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | GCTACACTCCAGCACCAGTCCTCGGTCTCAGGGACCTaGAGCAGCAAGTTGTTCGGTTGGATTTGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATLQHQSSVSGT*SSKLFGWICGR Trigger: CCTGCCACAAATCCAACCGAACAACTTGCTGCTCCAGGTCCCTGAGACCGAGGACTGGTGCTGGAGTGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | CACCAGTCCTCGGTCTCAGGGACCTGGAGCAGCAAGTaGTTCGGTTGGATTTGTGGCAGGAAGGCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: HQSSVSGTWSSK*FGWICGRKATS Trigger: AGAGGTGGCCTTCCTGCCACAAATCCAACCGAACAACTTGCTGCTCCAGGTCCCTGAGACCGAGGACTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 90 bp | CCTCTGTGGTCGTGGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTaGCTGAAGCCACTGTCCTTACCGATCTTCTCACCCATGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLWSWRKRRKWSELQ*LKPLSLPIFSPMRQ Trigger: CTGCCTCATGGGTGAGAAGATCGGTAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCACGACCACAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 90 bp | TCGGGAGGTGCAAAGCCGAAGGAGCAGTGGCAGTTCCCCAGGTCATaGCACACCCCGTGCTTGTTGCATTGTTTGCTTGGACTACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SGGAKPKEQWQFPRS*HTPCLLHCLLGLQG Trigger: TCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTCCTTCGGCTTTGCACCTCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS TCA 72 bp | GGATTGGGTGGAGTTCGGCCCTGGACTGCTGTCATTTaGCAGATTAACAGCAGGGCCACTGTCCACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: GLGGVRPWTAVI*QINSRATVHTA Trigger: GGCAGTGTGGACAGTGGCCCTGCTGTTAATCTGTCAAATGACAGCAGTCCAGGGCCGAACTCCACCCAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | AGAGCCGTCCTGGGCTTTCCTGTCACTGGGACATGCTaGAGAGGTCCCATTGCAGTATTCTTCCAGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: RAVLGFPVTGTC*RGPIAVFFQVT Trigger: TGTGACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCCAGTGACAGGAAAGCCCAGGACGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | CTTAGAGCCGTCCTGGGCTTTCCTGTCACTGGGACATaGTGCAGAGGTCCCATTGCAGTATTCTTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LRAVLGFPVTGT*CRGPIAVFFQV Trigger: GACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCCAGTGACAGGAAAGCCCAGGACGGCTCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | AAGCACAAGAAGGATTCGTGGCACTTAGAGCCGTCCTaGGCTTTCCTGTCACTGGGACATGCTGCAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KHKKDSWHLEPS*AFLSLGHAAEV Trigger: GACCTCTGCAGCATGTCCCAGTGACAGGAAAGCCCAGGACGGCTCTAAGTGCCACGAATCCTTCTTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | GCAAAGCCGAAGGAGCAGTGGCAGTTCCCCAGGTCATaGCACACCCCGTGCTTGTTGCATTGTTTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: AKPKEQWQFPRS*HTPCLLHCLLG Trigger: TCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTCCTTCGGCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | CTTTCCTGTCACTGGGACATGCTGCAGAGGTCCCATTaGAGTATTCTTCCAGGTCACATGGTCCGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LSCHWDMLQRSH*SILPGHMVRQQ Trigger: CTGCTGACGGACCATGTGACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCCAGTGACAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | GCTTTCCTGTCACTGGGACATGCTGCAGAGGTCCCATaGCAGTATTCTTCCAGGTCACATGGTCCGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AFLSLGHAAEVP*QYSSRSHGPSA Trigger: TGCTGACGGACCATGTGACCTGGAAGAATACTGCAATGGGACCTCTGCAGCATGTCCCAGTGACAGGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 90 bp | CCGAAGGAGCAGTGGCAGTTCCCCAGGTCATTGCACACCCCGTGCTaGTTGCATTGTTTGCTTGGACTACAGGGAAATGAGAATGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PKEQWQFPRSLHTPC*LHCLLGLQGNENGV Trigger: CACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTCCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | GAGCAGTGGCAGTTCCCCAGGTCATTGCACACCCCGTaGTTGTTGCATTGTTTGCTTGGACTACAGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: EQWQFPRSLHTP*LLHCLLGLQGN Trigger: ATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | TGCAGAGGTCCCATTGCAGTATTCTTCCAGGTCACATaGTCCGTCAGCAGGACGGCAAACATCTCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CRGPIAVFFQVT*SVSRTANISFL Trigger: AAGGAAGGAGATGTTTGCCGTCCTGCTGACGGACCATGTGACCTGGAAGAATACTGCAATGGGACCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | TCGGTCTCAGGGACCTGGAGCAGCAAGTTGTTCGGTTaGATTTGTGGCAGGAAGGCCACCTCTGTACATATA | + |
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Preference number: 6 (lower is better) Translates to: SVSGTWSSKLFG*ICGRKATSVHI Trigger: TATATGTACAGAGGTGGCCTTCCTGCCACAAATCCAACCGAACAACTTGCTGCTCCAGGTCCCTGAGACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | CAGTGGCAGTTCCCCAGGTCATTGCACACCCCGTGCTaGTTGCATTGTTTGCTTGGACTACAGGGAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: QWQFPRSLHTPC*LHCLLGLQGNE Trigger: CTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 90 bp | AAGGAGCAGTGGCAGTTCCCCAGGTCATTGCACACCCCGTGCTTGTaGCATTGTTTGCTTGGACTACAGGGAAATGAGAATGGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KEQWQFPRSLHTPCL*HCLLGLQGNENGVK Trigger: CTTCACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGGGAACTGCCACTGCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CCA 72 bp | AGCTTTAAGTTAAGGATCAGCTCCTCTGTGCTGGATTaGGTGGAGTTCGGCCCTGGACTGCTGTCATTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SFKLRISSSVLD*VEFGPGLLSFD Trigger: GTCAAATGACAGCAGTCCAGGGCCGAACTCCACCCAATCCAGCACAGAGGAGCTGATCCTTAACTTAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | CCCAGGTCATTGCACACCCCGTGCTTGTTGCATTGTTaGCTTGGACTACAGGGAAATGAGAATGGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PRSLHTPCLLHC*LGLQGNENGVK Trigger: CTTCACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAATGCAACAAGCACGGGGTGTGCAATGACCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | TCCAATGTCACAGAACGTGCTCGGGAGAAAAATTATTaGCAAGAGCAACATGGCCACCAGCCTGATACACCA | + |
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Preference number: 6 (lower is better) Translates to: SNVTERAREKNY*QEQHGHQPDTP Trigger: TGGTGTATCAGGCTGGTGGCCATGTTGCTCTTGGCAATAATTTTTCTCCCGAGCACGTTCTGTGACATTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | AATTTTCATCACAACACTGGCTTTTATCACAGTCACTaGCACAGTCACACTGCTCCAAGTCCTCCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: NFHHNTGFYHSH*HSHTAPSPPPH Trigger: GTGTGGTGGAGGACTTGGAGCAGTGTGACTGTGGCAGTGACTGTGATAAAAGCCAGTGTTGTGATGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 90 bp | GTTTCCCACACATTACATTTTTATCTGAACACTTGGTATACTTTTTaGGAAATTGAGAGGAGGAGCCACAGTTTCCAAACTGGTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VSHTLHFYLNTWYTF*EIERRSHSFQTGLL Trigger: GAGGAGACCAGTTTGGAAACTGTGGCTCCTCCTCTCAATTTCCAAAAAAGTATACCAAGTGTTCAGATAAAAATGTAATGTGTGGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | AGGAAGAATTATATACAGATCCAATGTCACAGAACGTaGTCGGGAGAAAAATTATTGCCAAGAGCAACATGG | + |
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Preference number: 6 (lower is better) Translates to: RKNYIQIQCHRT*SGEKLLPRATW Trigger: CCATGTTGCTCTTGGCAATAATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTATATAATTCTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | CATTTAAAACAGCAAAGTTCAGTGCTGCACACTGAGTaGCCCTTCAGTTTACAATTTTCATCACAACACTGG | + |
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Preference number: 6 (lower is better) Translates to: HLKQQSSVLHTE*PFSLQFSSQHW Trigger: CCAGTGTTGTGATGAAAATTGTAAACTGAAGGGCAACTCAGTGTGCAGCACTGAACTTTGCTGTTTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS TCA 72 bp | GTTACATTTAAAACAGCAAAGTTCAGTGCTGCACACTaGGTTGCCCTTCAGTTTACAATTTTCATCACAACA | + |
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Preference number: 6 (lower is better) Translates to: VTFKTAKFSAAH*VALQFTIFITT Trigger: TGTTGTGATGAAAATTGTAAACTGAAGGGCAACTCAGTGTGCAGCACTGAACTTTGCTGTTTTAAATGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS GCA 72 bp | AGTCCTCACAAATGGAATTTTTACAGACTTTATCTTTaGCACAGTAAGTGTTGTCCTTCACGTATTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SPHKWNFYRLYL*HSKCCPSRIPH Trigger: ATGAGGAATACGTGAAGGACAACACTTACTGTGGCAAAGATAAAGTCTGTAAAAATTCCATTTGTGAGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS TCA 72 bp | ATTGTTTGCTTGGACTACAGGGAAATGAGAATGGAGTaGAGTCCTCACAAATGGAATTTTTACAGACTTTAT | + |
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Preference number: 6 (lower is better) Translates to: IVCLDYREMRME*SPHKWNFYRLY Trigger: ATAAAGTCTGTAAAAATTCCATTTGTGAGGACTTCACTCCATTCTCATTTCCCTGTAGTCCAAGCAAACAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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| CDS CAA 72 bp | ACATTACATTTTTATCTGAACACTTGGTATACTTTTTaGGAAATTGAGAGGAGGAGCCACAGTTTCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: TLHFYLNTWYTF*EIERRSHSFQT Trigger: AGTTTGGAAACTGTGGCTCCTCCTCTCAATTTCCAAAAAAGTATACCAAGTGTTCAGATAAAAATGTAATGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079368.5 |
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