Pregenerated sensors for ADAM1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072647Ensembl transcript IDs: ENSMUST00000100757.6
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGACCACACATTACACTaGACAGCATGCCCTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: LKCLLFYEQELTGQVRTFDHTLH*TACPKI Trigger: GATTTTAGGGCATGCTGTTCAGTGTAATGTGTGGTC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCAGTTGTTTCTGAGATaGGCAACACAAGTATATAGA | + |
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Preference number: 2 (lower is better) Translates to: LKCLLFYEQELTGQVRTFQLFLR*ATQVYR Trigger: TCTATATACTTGTGTTGCTCATCTCAGAAACAACTG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| 3UTR TCA 72 bp | GATGAGCAACACAAGTATATAGACCACACATTACACTaGACAGCATGCCCTAAAATCCACTTAGGCAAAATT | + |
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Preference number: 3 (lower is better) Translates to: DEQHKYIDHTLH*TACPKIHLGKI Trigger: AATTTTGCCTAAGTGGATTTTAGGGCATGCTGTTCAGTGTAATGTGTGGTCTATATACTTGTGTTGCTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGGGCTTCCTGCTCCTTaGTGGATGGCTGGTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDGLPAP*WMAGVP Trigger: GGGGACACCAGCCATCCACCAAGGAGCAGGAAGCCC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTTGTGCCCGAGCTCGTaGGCCATGAGAGCCGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDLCPSS*AMRAAN Trigger: GTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGGTCATCGGGCTTCCTaGTCCTTGGTGGATGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDGHRAS*SLVDGW Trigger: CCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATAAGTGTGCCACATCGTaGCTGACCCGGCCCACGAGT | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDKCATS*LTRPTS Trigger: ACTCGTGGGCCGGGTCAGGCACGATGTGGCACACTT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGTGGGGAAGACAGACTaGAGGCAAACCCTCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDVGKTD*RQTLSP Trigger: CGGGGAGAGGGTTTGCCTCCAGTCTGTCTTCCCCAC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCTTCCTGCTCCTTGGTaGATGGCTGGTGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDLPAPW*MAGVPR Trigger: CCTGGGGACACCAGCCATCCACCAAGGAGCAGGAAG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGGCTGTCTTTGGGAGTaGCACTGCAGGAGACCACAG | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDGCLWE*HCRRPQ Trigger: CTGTGGTCTCCTGCAGTGTCACTCCCAAAGACAGCC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGCCCCTCTGTGGTCATaGAGGAAACGGAGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDAPLWS*RKRRKW Trigger: CCACTTCCTCCGTTTCCTCCATGACCACAGAGGGGC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGGAACCGCTGGTGGTTaGCCACCACAAACATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDGTAGG*PPQTSP Trigger: TGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCCTGGACCGTCTCGTTaGTGTTACTGCCCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDPGPSR*CYCPTS Trigger: AGATGTGGGGCAGTAACATCAACGAGACGGTCCAGG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCGATCTTCTCACCCATaGGGCAGAAGTGCTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDRSSHP*GRSAWD Trigger: GTCCCAAGCACTTCTGCCTCATGGGTGAGAAGATCG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTTACTGCCCCACATCTaGAACCGCTGGTGGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDLLPHI*NRWWLT Trigger: GGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCTGCTCCTTGGTGGATaGCTGGTGTCCCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFLLLGG*LVSPGL Trigger: CAGCCCTGGGGACACCAGCCATCCACCAAGGAGCAG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCACATCTGGAACCGCTaGTGGTTGACCACCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDHIWNR*WLTTTN Trigger: GTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGTCGGGTGGTCGTGCTaGATACCCAGGTTGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFVGWSC*IPRLCP Trigger: CGGGCACAACCTGGGTATCCAGCACGACCACCCGAC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATAGGAGAGGCATTTCTTaGCTCAGGATGCCATTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDRRGIS*LRMPLW Trigger: CCACAATGGCATCCTGAGGCAAGAAATGCCTCTCCT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTGGATACCCAGGTTGTaGCCGAGCTCGTGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFWIPRL*PSSWAM Trigger: CATGGCCCACGAGCTCGGGCACAACCTGGGTATCCA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCAGGTCGGGTGGTCGTaGTGGATACCCAGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFQVGWS*WIPRLC Trigger: GCACAACCTGGGTATCCAGCACGACCACCCGACCTG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATGGCATTCCTGAGTACTaGCGTCACAATACTCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDGIPEY*RHNTRE Trigger: TTCCCGAGTATTGTGACGGCAGTACTCAGGAATGCC...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATATCTGGAACCGCTGGTaGTTGACCACCACAAACATC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDIWNRW*LTTTNI Trigger: GATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGAT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATACATCTCCACATACTTaGTGTGTGACCACCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDTSPHT*CVTTSQ Trigger: CTGACTGGTGGTCACACACCAAGTATGTGGAGATGT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATAGCTCCCTTTCTTCTTaGATGTACAGTTGTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDSSLSS*MYSCSS Trigger: GCTGCTACAACTGTACATTCAAGAAGAAAGGGAGCT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATAATGATGTCCATTACTaGCTGGACCGTCTCGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDNDVHY*LDRLVD Trigger: ATCAACGAGACGGTCCAGGCAGTAATGGACATCATT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTTCCTGAGTGTGGTCTaGAGGTCCACTGGGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFFLSVV*RSTGTS Trigger: AGAGGTCCCAGTGGACCTGCAGACCACACTCAGGAA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTAGTCCCTCACTGCACTaGGCACCCTCCTTAAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFSPSLH*APSLSV Trigger: TACGCTTAAGGAGGGTGCGCAGTGCAGTGAGGGACT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTGCAGATATACTCCATaGAGACTTTGTTTGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ACPKIHLGKIALQIQDIDCRYTP*RLCLGH Trigger: GTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTAGAAACAAAGGAGCCTaGCACCCCTTCCATGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFRNKGA*HPFHVA Trigger: GGCTACATGGAAGGGGTGCCAGGCTCCTTTGTTTCT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTAGGAAACGGAGGAAGTaGTCAGAGCTGCAGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFRKRRK*SELQLL Trigger: CAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCATGCAGACTTTGTTTaGGGCACAGAAGGTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFHADFV*GTEGAA Trigger: AGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGGCCTGAACAGATGTTaGCAGAAACAAAGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFGLNRC*QKQRSL Trigger: CAGGCTCCTTTGTTTCTGTCAACATCTGTTCAGGCC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTGTTGGCCAGAGCAATaGTGTCCATTACTGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFCWPEQ*CPLLPG Trigger: TCCAGGCAGTAATGGACATCATTGCTCTGGCCAACA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCTCAGGGGCAGATCTTaGAGGATACCCATAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFLRGRS*RIPIDP Trigger: AGGATCTATGGGTATCCTGCAAGATCTGCCCCTGAG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGTGACACATTTCCTGTaGCTCACAGTTGTACTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFVTHFL*LTVVLE Trigger: CTCCAGTACAACTGTGAGCCACAGGAAATGTGTCAC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTAGAGCATGGGCTCAATaGCATAGGATGTTTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFRAWAQ*HRMFPL Trigger: AAGAGGAAACATCCTATGGCATTGAGCCCATGCTCT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR GCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTTTCTTGCCTCAGGATaGCATTGTGGTAACTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFFLASG*HCGNCR Trigger: TCTACAGTTACCACAATGGCATCCTGAGGCAAGAAA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGTGGTAACTGTAGACTaGGAAGTTATTCTCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFVVTVD*EVILRV Trigger: TACCCTGAGAATAACTTCCCAGTCTACAGTTACCAC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTCTCCATTTTATCATCTaGACTCTCTTCAGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFLHFII*TLFSQK Trigger: TTTCTGGCTGAAGAGAGTCCAGATGATAAAATGGAG...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR TCA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTATACCCATAGATCCTTaGACATTGTTTATCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LKCLLFYEQELTGQVRTFIPIDP*TLFIRV Trigger: AACCCTGATAAACAATGTTCAAGGATCTATGGGTAT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | GGACCACAGGTGCAGGTCGGGTGGTCGTGCTGGATACCCAGGTTGTaGCCGAGCTCGTGGGCCATGAGAGCCGCGAACAGGAGGACATCT | + |
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Preference number: 5 (lower is better) Translates to: GPQVQVGWSCWIPRL*PSSWAMRAANRRTS Trigger: AGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCACCCGACCTGCACCTGTGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | CCAAGTCCTCCACCACACCATTCCCACAATTGGCAGCTCTGCGCATaGGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACGCCCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: PSPPPHHSHNWQLCA*GSGAQAHQAGTPLC Trigger: ACAGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGAGGACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | ACTCCTCCAAGTCCTCCACCACACCATTCCCACAATTGGCAGCTCTaGGCATGCGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACGCCC | + |
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Preference number: 5 (lower is better) Translates to: TPPSPPPHHSHNWQL*ACGSGAQAHQAGTP Trigger: GGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGAGGACTTGGAGGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | TCCACCACACCATTCCCACAATTGGCAGCTCTGCGCATGCGGCTCTaGCGCCCAGGCTCATCAAGCAGGCACGCCCCTCTGTGGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: STTPFPQLAALRMRL*RPGSSSRHAPLWSW Trigger: CCATGACCACAGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | ATGCGGCTCTGGCGCCCAGGCTCATCAAGCAGGCACGCCCCTCTGTaGTCATGGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRLWRPGSSSRHAPL*SWRKRRKWSELQLL Trigger: CAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCACAGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAGCCGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 90 bp | GGTGGTCGTGCTGGATACCCAGGTTGTGCCCGAGCTCGTGGGCCATaGGAGCCGCGAACAGGAGGACATCTTCATGATGGAAGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRAGYPGCARARGP*EPRTGGHLHDGRPP Trigger: TGGAGGCCTTCCATCATGAAGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | CTCTGGCGCCCAGGCTCATCAAGCAGGCACGCCCCTCTGTGGTCATaGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTGCTGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LWRPGSSSRHAPLWS*RKRRKWSELQLLKP Trigger: TGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCACAGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | CTGAAGCCACTGTCCTTACCGATCTTCTCACCCATGAGGCAGAAGTaGTTGGGACCACAGGTGCAGGTCGGGTGGTCGTGCTGGATACCC | + |
|
Preference number: 5 (lower is better) Translates to: LKPLSLPIFSPMRQK*LGPQVQVGWSCWIP Trigger: GGGTATCCAGCACGACCACCCGACCTGCACCTGTGGTCCCAAGCACTTCTGCCTCATGGGTGAGAAGATCGGTAAGGACAGTGGCTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | TCAGTCAGAACCAGTAGGTCATCGGGCTTCCTGCTCCTTGGTGGATaGCTGGTGTCCCCAGGGCTGTCTTTGGGAGTGACACTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVRTSRSSGFLLLGG*LVSPGLSLGVTLQE Trigger: CTCCTGCAGTGTCACTCCCAAAGACAGCCCTGGGGACACCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACCTACTGGTTCTGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | CTGTCTCCAGAAGTTGAAATTCCTGAGTGTGGTCTGCAGGTCCACTaGGACCTCTATCGGGTCCCCCTCTGTCCAGATTTCCAGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPEVEIPECGLQVH*DLYRVPLCPDFQAH Trigger: GTGGGCCTGGAAATCTGGACAGAGGGGGACCCGATAGAGGTCCCAGTGGACCTGCAGACCACACTCAGGAATTTCAACTTCTGGAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | GAGCACCCCACGACCAGTGCAGATATACTCCATGCAGACTTTGTTTaGGGCACAGAAGGTGCCGCTCTGTACATCTCCGTCATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EHPTTSADILHADFV*GTEGAALYISVIRD Trigger: GTCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCACTGGTCGTGGGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | CCCCTAGTGAAGCTGTTGGCCAGAGCAATGATGTCCATTACTGCCTaGACCGTCTCGTTGATGTTACTGCCCCACATCTGGAACCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLVKLLARAMMSITA*TVSLMLLPHIWNRW Trigger: CCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | GCCTGGACCGTCTCGTTGATGTTACTGCCCCACATCTGGAACCGCTaGTGGTTGACCACCACAAACATCTCCACATACTTGGTGTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AWTVSLMLLPHIWNR*WLTTTNISTYLVCD Trigger: GTCACACACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | TATCCCCCTAGTGAAGCTGTTGGCCAGAGCAATGATGTCCATTACTaGCTGGACCGTCTCGTTGATGTTACTGCCCCACATCTGGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: YPPSEAVGQSNDVHY*LDRLVDVTAPHLEP Trigger: CGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACTAGGGGGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | TGGACCGTCTCGTTGATGTTACTGCCCCACATCTGGAACCGCTGGTaGTTGACCACCACAAACATCTCCACATACTTGGTGTGTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: WTVSLMLLPHIWNRW*LTTTNISTYLVCDH Trigger: GTGGTCACACACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | ACATTTCCTGTGGCTCACAGTTGTACTGGAGCACCCCACGACCAGTaGAGATATACTCCATGCAGACTTTGTTTGGGGCACAGAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TFPVAHSCTGAPHDQ*RYTPCRLCLGHRRC Trigger: GCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCACTGGTCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | TCCATTACTGCCTGGACCGTCTCGTTGATGTTACTGCCCCACATCTaGAACCGCTGGTGGTTGACCACCACAAACATCTCCACATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SITAWTVSLMLLPHI*NRWWLTTTNISTYL Trigger: CAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 90 bp | CACAGAAGGTGCCGCTCTGTACATCTCCGTCATCCGGGACATCTGTaGTGTTATAGGCATCCATACTCCAACACCAGTCCTCTCCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRCRSVHLRHPGHL*CYRHPYSNTSPLHK Trigger: CTTATGGAGAGGACTGGTGTTGGAGTATGGATGCCTATAACATCACAGATGTCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 90 bp | CATAGTGGCAGTCCTGGGAGAGGAGAGGCATTTCTTGCCTCAGGATaGCATTGTGGTAACTGTAGACTGGGAAGTTATTCTCAGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSGSPGRGEAFLASG*HCGNCRLGSYSQGS Trigger: ACTACCCTGAGAATAACTTCCCAGTCTACAGTTACCACAATGGCATCCTGAGGCAAGAAATGCCTCTCCTCTCCCAGGACTGCCACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | GTGCTTGAAATTGTTGCACACTCCATTCCCGTGACACATTTCCTGTaGCTCACAGTTGTACTGGAGCACCCCACGACCAGTGCAGATATA | + |
|
Preference number: 5 (lower is better) Translates to: VLEIVAHSIPVTHFL*LTVVLEHPTTSADI Trigger: TATATCTGCACTGGTCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGAAATGTGTCACGGGAATGGAGTGTGCAACAATTTCAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | GAGAGGCATTTCTTGCCTCAGGATGCCATTGTGGTAACTGTAGACTaGGAAGTTATTCTCAGGGTAGTGTCCCTTTACCTCGAGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERHFLPQDAIVVTVD*EVILRVVSLYLEVK Trigger: CTTCACCTCGAGGTAAAGGGACACTACCCTGAGAATAACTTCCCAGTCTACAGTTACCACAATGGCATCCTGAGGCAAGAAATGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCCATGCAGACTTTGTTaGGGGCACAGAAGGTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDPCRLC*GHRRCR Trigger: GCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 90 bp | GGTGGGATGGCCACAGTTTCCAAACCGGTTCGCCTTAGTATTAACTaGAATGTAACATTCCTCAGGGGCAGATCTTGCAGGATACCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GGMATVSKPVRLSIN*NVTFLRGRSCRIPI Trigger: TATGGGTATCCTGCAAGATCTGCCCCTGAGGAATGTTACATTTCAGTTAATACTAAGGCGAACCGGTTTGGAAACTGTGGCCATCCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTGGAACCGCTGGTGGTaGACCACCACAAACATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDWNRWW*TTTNIS Trigger: GGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATCCCCTAGTGAAGCTGTaGGCCAGAGCAATGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDPLVKL*ARAMMS Trigger: GGACATCATTGCTCTGGCCAACAGCTTCACTAGGGG...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTGCTGGATACCCAGGTaGTGCCCGAGCTCGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFCWIPR*CPSSWA Trigger: GGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTGGTCAGAGCTGCAGTaGCTGAAGCCACTGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDWSELQ*LKPLSL Trigger: TAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTCCCCAGGGCTGTCTTaGGGAGTGACACTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFSPGLS*GVTLQE Trigger: CTCCTGCAGTGTCACTCCCAAAGACAGCCCTGGGGA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 90 bp | CACCATCACTTTCAGGTTTACCTCTTCATCCTCCATTTTATCATCTaGACTCTCTTCAGCCAGAAAAGAGAGACTCAAGTGTCGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HHHFQVYLFILHFII*TLFSQKRETQVSIS Trigger: GCTGATCGACACTTGAGTCTCTCTTTTCTGGCTGAAGAGAGTCCAGATGATAAAATGGAGGATGAAGAGGTAAACCTGAAAGTGATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATAACATCTCCACATACTaGGTGTGTGACCACCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDNISTY*VCDHQS Trigger: TGACTGGTGGTCACACACCAAGTATGTGGAGATGTT...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGCCTGGACCGTCTCGTaGATGTTACTGCCCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFAWTVS*MLLPHI Trigger: GATGTGGGGCAGTAACATCAACGAGACGGTCCAGGC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTATGAGGCAGAAGTGCTaGGGACCACAGGTGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFMRQKC*GPQVQV Trigger: GACCTGCACCTGTGGTCCCAAGCACTTCTGCCTCAT...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTCCTGTGGCTCACAGTaGTACTGGAGCACCCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFSCGSQ*YWSTPR Trigger: TCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTGAGGAGAGGCATTTCTaGCCTCAGGATGCCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFEERHF*PQDAIV Trigger: CACAATGGCATCCTGAGGCAAGAAATGCCTCTCCTC...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | GCATGCCCTAAAATCCACTTAGGCAAAATTGCCCTGCAAATACAAGACATCGATTGGAGATACTACTTCTaGTACTTCAGACCAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ACPKIHLGKIALQIQDIDWRYYF*YFRPEV Trigger: TACCTCTGGTCTGAAGTACAAGAAGTAGTATCTCCA...ATCGATGTCTTGTATTTGCAGGGCAATTTTGCCTAAGTGGATTTTAGGGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTCCTGTCTCCAGAAGTaGAAATTCCTGAGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFSCLQK*KFLSVV Trigger: GACCACACTCAGGAATTTCAACTTCTGGAGACAGGA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS-3UTR CAA 90 bp | TTAAAATGCCTTCTATTTTATGAACAGGAGCTGACAGGGCAAGTTAGAACATTTTGTAGGGGTTTGACTTaGGGCAGGTATCTAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LKCLLFYEQELTGQVRTFCRGLT*GRYLTS Trigger: AGATGTTAGATACCTGCCCAAAGTCAAACCCCTACA...AAATGTTCTAACTTGCCCTGTCAGCTCCTGTTCATAAAATAGAAGGCATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | GTGCAGGTCGGGTGGTCGTGCTGGATACCCAGGTTGTaGCCGAGCTCGTGGGCCATGAGAGCCGCGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQVGWSCWIPRL*PSSWAMRAANR Trigger: CCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCACCCGACCTGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | CAGGTGCAGGTCGGGTGGTCGTGCTGGATACCCAGGTaGTGCCCGAGCTCGTGGGCCATGAGAGCCGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QVQVGWSCWIPR*CPSSWAMRAAN Trigger: GTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCACCCGACCTGCACCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | TTGGGACCACAGGTGCAGGTCGGGTGGTCGTGCTGGATACCCAGGTaGTGCCCGAGCTCGTGGGCCATGAGAGCCGCGAACAGGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGPQVQVGWSCWIPR*CPSSWAMRAANRRT Trigger: TGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCACCCGACCTGCACCTGTGGTCCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | CCTGGGCGATGCCCGACGATCAAGTGTGCCACATCGTaGCTGACCCGGCCCACGAGTTTCTCCTGTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGRCPTIKCATS*LTRPTSFSCLQ Trigger: CTGGAGACAGGAGAAACTCGTGGGCCGGGTCAGGCACGATGTGGCACACTTGATCGTCGGGCATCGCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | CGGAGAAACGCCTGGCCCTCGTTCTCTCCTGGGCGATaGCCGACGATCAAGTGTGCCACATCGTGCCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RRNAWPSFSPGR*PTIKCATSCLT Trigger: GGTCAGGCACGATGTGGCACACTTGATCGTCGGGCATCGCCCAGGAGAGAACGAGGGCCAGGCGTTTCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | TGGCGCCCAGGCTCATCAAGCAGGCACGCCCCTCTGTaGTCATGGAGGAAACGGAGGAAGTGGTCAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WRPGSSSRHAPL*SWRKRRKWSEL Trigger: CAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCACAGAGGGGCGTGCCTGCTTGATGAGCCTGGGCGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | GTGGATGGCTGGTGTCCCCAGGGCTGTCTTTGGGAGTaGCACTGCAGGAGACCACAGGCTGATGCTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: VDGWCPQGCLWE*HCRRPQADAPW Trigger: CCATGGAGCATCAGCCTGTGGTCTCCTGCAGTGTCACTCCCAAAGACAGCCCTGGGGACACCAGCCATCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | AGTCCTCCACCACACCATTCCCACAATTGGCAGCTCTaGGCATGCGGCTCTGGCGCCCAGGCTCATCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPPHHSHNWQL*ACGSGAQAHQA Trigger: TGCTTGATGAGCCTGGGCGCCAGAGCCGCATGCGCAGAGCTGCCAATTGTGGGAATGGTGTGGTGGAGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | TGGTCGTGCTGGATACCCAGGTTGTGCCCGAGCTCGTaGGCCATGAGAGCCGCGAACAGGAGGACATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WSCWIPRLCPSS*AMRAANRRTSS Trigger: TGAAGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGCACGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | GCTGGATACCCAGGTTGTGCCCGAGCTCGTGGGCCATaGGAGCCGCGAACAGGAGGACATCTTCATGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGYPGCARARGP*EPRTGGHLHDG Trigger: TCCATCATGAAGATGTCCTCCTGTTCGCGGCTCTCATGGCCCACGAGCTCGGGCACAACCTGGGTATCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | ACCAGTCAGTCAGAACCAGTAGGTCATCGGGCTTCCTaGTCCTTGGTGGATGGCTGGTGTCCCCAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSQSEPVGHRAS*SLVDGWCPQGC Trigger: ACAGCCCTGGGGACACCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACCTACTGGTTCTGACTGACTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | CCAGGCTCATCAAGCAGGCACGCCCCTCTGTGGTCATaGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGSSSRHAPLWS*RKRRKWSELQL Trigger: CAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCACAGAGGGGCGTGCCTGCTTGATGAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | CAGTCAGAACCAGTAGGTCATCGGGCTTCCTGCTCCTaGGTGGATGGCTGGTGTCCCCAGGGCTGTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSEPVGHRASCS*VDGWCPQGCLW Trigger: CCAAAGACAGCCCTGGGGACACCAGCCATCCACCAAGGAGCAGGAAGCCCGATGACCTACTGGTTCTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | CCCTCCTTAAGCGTACATGTTGGCGAACAGCACGGGTaGCTGTCACAGTCACTGCCGCAGTCACACTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSLSVHVGEQHG*LSQSLPQSHSS Trigger: GGAGGAGTGTGACTGCGGCAGTGACTGTGACAGTCACCCGTGCTGTTCGCCAACATGTACGCTTAAGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | ATGTTGGCGAACAGCACGGGTGACTGTCACAGTCACTaGCGCAGTCACACTCCTCCAAGTCCTCCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: MLANSTGDCHSH*RSHTPPSPPPH Trigger: GTGTGGTGGAGGACTTGGAGGAGTGTGACTGCGGCAGTGACTGTGACAGTCACCCGTGCTGTTCGCCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | CTCACTGCACTGCGCACCCTCCTTAAGCGTACATGTTaGCGAACAGCACGGGTGACTGTCACAGTCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LTALRTLLKRTC*RTARVTVTVTA Trigger: GGCAGTGACTGTGACAGTCACCCGTGCTGTTCGCCAACATGTACGCTTAAGGAGGGTGCGCAGTGCAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | GGAGCACCCCACGACCAGTGCAGATATACTCCATGCAGACTTTGTTaGGGGCACAGAAGGTGCCGCTCTGTACATCTCCGTCATCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GAPHDQCRYTPCRLC*GHRRCRSVHLRHPG Trigger: TCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCACTGGTCGTGGGGTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | GCCTGGACCGTCTCGTTGATGTTACTGCCCCACATCTaGAACCGCTGGTGGTTGACCACCACAAACATCTCC | + |
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Preference number: 6 (lower is better) Translates to: AWTVSLMLLPHI*NRWWLTTTNIS Trigger: GGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | CTGTTGGCCAGAGCAATGATGTCCATTACTGCCTGGACCGTCTCGTaGATGTTACTGCCCCACATCTGGAACCGCTGGTGGTTGACCACC | + |
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Preference number: 6 (lower is better) Translates to: LLARAMMSITAWTVS*MLLPHIWNRWWLTT Trigger: GGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | CCTCTGTGGTCATGGAGGAAACGGAGGAAGTGGTCAGAGCTGCAGTaGCTGAAGCCACTGTCCTTACCGATCTTCTCACCCATGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLWSWRKRRKWSELQ*LKPLSLPIFSPMRQ Trigger: CTGCCTCATGGGTGAGAAGATCGGTAAGGACAGTGGCTTCAGCAACTGCAGCTCTGACCACTTCCTCCGTTTCCTCCATGACCACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | GAAGTTGAAATTCCTGAGTGTGGTCTGCAGGTCCACTaGGACCTCTATCGGGTCCCCCTCTGTCCAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: EVEIPECGLQVH*DLYRVPLCPDF Trigger: GAAATCTGGACAGAGGGGGACCCGATAGAGGTCCCAGTGGACCTGCAGACCACACTCAGGAATTTCAACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | AGAGCAATGATGTCCATTACTGCCTGGACCGTCTCGTaGATGTTACTGCCCCACATCTGGAACCGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RAMMSITAWTVS*MLLPHIWNRWW Trigger: CCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | ATCTGGAACCGCTGGTGGTTGACCACCACAAACATCTCCACATACTaGGTGTGTGACCACCAGTCAGTCAGAACCAGTAGGTCATCGGGC | + |
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Preference number: 6 (lower is better) Translates to: IWNRWWLTTTNISTY*VCDHQSVRTSRSSG Trigger: GCCCGATGACCTACTGGTTCTGACTGACTGGTGGTCACACACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 90 bp | ACCGTCTCGTTGATGTTACTGCCCCACATCTGGAACCGCTGGTGGTaGACCACCACAAACATCTCCACATACTTGGTGTGTGACCACCAG | + |
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Preference number: 6 (lower is better) Translates to: TVSLMLLPHIWNRWW*TTTNISTYLVCDHQ Trigger: CTGGTGGTCACACACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | TATACTCCATGCAGACTTTGTTTGGGGCACAGAAGGTaGCGCTCTGTACATCTCCGTCATCCGGGACATCTG | + |
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Preference number: 6 (lower is better) Translates to: YTPCRLCLGHRR*RSVHLRHPGHL Trigger: CAGATGTCCCGGATGACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | AAGCTGTTGGCCAGAGCAATGATGTCCATTACTGCCTaGACCGTCTCGTTGATGTTACTGCCCCACATCTGG | + |
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Preference number: 6 (lower is better) Translates to: KLLARAMMSITA*TVSLMLLPHIW Trigger: CCAGATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | ACGACCAGTGCAGATATACTCCATGCAGACTTTGTTTaGGGCACAGAAGGTGCCGCTCTGTACATCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: TTSADILHADFV*GTEGAALYISV Trigger: GACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCACTGGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | ATTGTTGCACACTCCATTCCCGTGACACATTTCCTGTaGCTCACAGTTGTACTGGAGCACCCCACGACCAGT | + |
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Preference number: 6 (lower is better) Translates to: IVAHSIPVTHFL*LTVVLEHPTTS Trigger: ACTGGTCGTGGGGTGCTCCAGTACAACTGTGAGCCACAGGAAATGTGTCACGGGAATGGAGTGTGCAACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | CGCTGGTGGTTGACCACCACAAACATCTCCACATACTaGGTGTGTGACCACCAGTCAGTCAGAACCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RWWLTTTNISTY*VCDHQSVRTSR Trigger: CCTACTGGTTCTGACTGACTGGTGGTCACACACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | AGCACCACCTCTGTGTTTATCCCCCTAGTGAAGCTGTaGGCCAGAGCAATGATGTCCATTACTGCCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: STTSVFIPLVKL*ARAMMSITAWT Trigger: GGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACTAGGGGGATAAACACAGAGGTGGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | CACGACCAGTGCAGATATACTCCATGCAGACTTTGTTaGGGGCACAGAAGGTGCCGCTCTGTACATCTCCGT | + |
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Preference number: 6 (lower is better) Translates to: HDQCRYTPCRLC*GHRRCRSVHLR Trigger: ACGGAGATGTACAGAGCGGCACCTTCTGTGCCCCAAACAAAGTCTGCATGGAGTATATCTGCACTGGTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | TGCCGCTCTGTACATCTCCGTCATCCGGGACATCTGTaGTGTTATAGGCATCCATACTCCAACACCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CRSVHLRHPGHL*CYRHPYSNTSP Trigger: AGGACTGGTGTTGGAGTATGGATGCCTATAACATCACAGATGTCCCGGATGACGGAGATGTACAGAGCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | AGTGAAGCTGTTGGCCAGAGCAATGATGTCCATTACTaGCTGGACCGTCTCGTTGATGTTACTGCCCCACAT | + |
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Preference number: 6 (lower is better) Translates to: SEAVGQSNDVHY*LDRLVDVTAPH Trigger: ATGTGGGGCAGTAACATCAACGAGACGGTCCAGGCAGTAATGGACATCATTGCTCTGGCCAACAGCTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | CCTATCACACTGTGTGCCATCCTGCATGTAGCTGTTTaGAGGGCATTCCTGAGTACTGCCGTCACAATACTC | + |
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Preference number: 6 (lower is better) Translates to: PITLCAILHVAV*RAFLSTAVTIL Trigger: GAGTATTGTGACGGCAGTACTCAGGAATGCCCTGCAAACAGCTACATGCAGGATGGCACACAGTGTGATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | TCGTTGATGTTACTGCCCCACATCTGGAACCGCTGGTaGTTGACCACCACAAACATCTCCACATACTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SLMLLPHIWNRW*LTTTNISTYLV Trigger: CACCAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | GTCTCGTTGATGTTACTGCCCCACATCTGGAACCGCTaGTGGTTGACCACCACAAACATCTCCACATACTTG | + |
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Preference number: 6 (lower is better) Translates to: VSLMLLPHIWNR*WLTTTNISTYL Trigger: CAAGTATGTGGAGATGTTTGTGGTGGTCAACCACCAGCGGTTCCAGATGTGGGGCAGTAACATCAACGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | TCCTATCACACTGTGTGCCATCCTGCATGTAGCTGTTaGCAGGGCATTCCTGAGTACTGCCGTCACAATACT | + |
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Preference number: 6 (lower is better) Translates to: SYHTVCHPACSC*QGIPEYCRHNT Trigger: AGTATTGTGACGGCAGTACTCAGGAATGCCCTGCAAACAGCTACATGCAGGATGGCACACAGTGTGATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | CTCAGGGGCAGATCTTGCAGGATACCCATAGATCCTTaGACATTGTTTATCAGGGTTCTTACACCAACCCCC | + |
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Preference number: 6 (lower is better) Translates to: LRGRSCRIPIDP*TLFIRVLTPTP Trigger: GGGGGTTGGTGTAAGAACCCTGATAAACAATGTTCAAGGATCTATGGGTATCCTGCAAGATCTGCCCCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CAA 72 bp | CCTCAGGGGCAGATCTTGCAGGATACCCATAGATCCTaGAACATTGTTTATCAGGGTTCTTACACCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: PQGQILQDTHRS*NIVYQGSYTNP Trigger: GGGGTTGGTGTAAGAACCCTGATAAACAATGTTCAAGGATCTATGGGTATCCTGCAAGATCTGCCCCTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS TCA 72 bp | GCCACAGTTTCCAAACCGGTTCGCCTTAGTATTAACTaGAATGTAACATTCCTCAGGGGCAGATCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATVSKPVRLSIN*NVTFLRGRSCR Trigger: CCTGCAAGATCTGCCCCTGAGGAATGTTACATTTCAGTTAATACTAAGGCGAACCGGTTTGGAAACTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | TTCTTGCCTCAGGATGCCATTGTGGTAACTGTAGACTaGGAAGTTATTCTCAGGGTAGTGTCCCTTTACCTC | + |
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Preference number: 6 (lower is better) Translates to: FLPQDAIVVTVD*EVILRVVSLYL Trigger: GAGGTAAAGGGACACTACCCTGAGAATAACTTCCCAGTCTACAGTTACCACAATGGCATCCTGAGGCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | GATGCTCCATGGTGTAGAGGACATGTTCAAAGTTTTTaGAAGAGAGCATGGGCTCAATGCCATAGGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: DAPWCRGHVQSF*KRAWAQCHRMF Trigger: AAACATCCTATGGCATTGAGCCCATGCTCTCTTCCAAAAACTTTGAACATGTCCTCTACACCATGGAGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS CCA 72 bp | TTTCAGGTTTACCTCTTCATCCTCCATTTTATCATCTaGACTCTCTTCAGCCAGAAAAGAGAGACTCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: FQVYLFILHFII*TLFSQKRETQV Trigger: CACTTGAGTCTCTCTTTTCTGGCTGAAGAGAGTCCAGATGATAAAATGGAGGATGAAGAGGTAAACCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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| CDS GCA 72 bp | AGGAAGAATTATATACAGATCCAATGTCACAGAACGTaGTCGGGAGAAAAATCAGTAGCACCAAAATCCCTA | + |
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Preference number: 6 (lower is better) Translates to: RKNYIQIQCHRT*SGEKSVAPKSL Trigger: TAGGGATTTTGGTGCTACTGATTTTTCTCCCGAGCACGTTCTGTGACATTGGATCTGTATATAATTCTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100757.6 |
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