Pregenerated sensors for ADAM18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031552Ensembl transcript IDs: ENSMUST00000033957.12, ENSMUST00000138232.2, ENSMUST00000173833.3
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGATTTCTGGTGCAATGAATGGCCCTCATATTTTGTGTTCTCCCTaGGGCACGATTTTCCTTTCGTTTCTCTTCATGATCCCAACAAGG | + |
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Preference number: 1 (lower is better) Translates to: PISGAMNGPHILCSP*GTIFLSFLFMIPTR Trigger: CCTTGTTGGGATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGCCATTCATTGCACCAGAAATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| 3UTR CAA 90 bp | AGTGTATCCACCGGTAACAGAGCGGTTAGAACACACACTTCCTCCTaGGGTCCATCAACTGCTAGCTTCCTTGGCCGATTTCTGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SVSTGNRAVRTHTSS*GPSTASFLGRFLVQ Trigger: TTGCACCAGAAATCGGCCAAGGAAGCTAGCAGTTGATGGACCCAAGGAGGAAGTGTGTGTTCTAACCGCTCTGTTACCGGTGGATACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| 3UTR TCA 72 bp | GGTGCAATGAATGGCCCTCATATTTTGTGTTCTCCCTaGGGCACGATTTTCCTTTCGTTTCTCTTCATGATC | + |
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Preference number: 3 (lower is better) Translates to: GAMNGPHILCSP*GTIFLSFLFMI Trigger: GATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGCCATTCATTGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| 3UTR-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAACACACACTTCCTCCTaGGGTCCATCAACTGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: LFSKSLRFKVYPPVTERLTHTSS*GPSTAS Trigger: GCTAGCAGTTGATGGACCCAAGGAGGAAGTGTGTGT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR GCA 90 bp | CCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCTCCCTGCTGCATTATaGATGGAGCGCTGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PTRKVTMKGRKMKKPRITLPAAL*MERWDR Trigger: CCTGTCCCAGCGCTCCATGCATAATGCAGCAGGGAG...GGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| 3UTR CAA 72 bp | ACCGGTAACAGAGCGGTTAGAACACACACTTCCTCCTaGGGTCCATCAACTGCTAGCTTCCTTGGCCGATTT | + |
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Preference number: 4 (lower is better) Translates to: TGNRAVRTHTSS*GPSTASFLGRF Trigger: AAATCGGCCAAGGAAGCTAGCAGTTGATGGACCCAAGGAGGAAGTGTGTGTTCTAACCGCTCTGTTACCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR GCA 90 bp | TACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGCTGTCCTCATTCGTGGCTCTATCTTCTaGGGCACTGTGATATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YDERQKDEEAQDHPAVLIRGSIF*GTVICR Trigger: CCTGCATATCACAGTGCCGCAGAAGATAGAGCCACG...AATGAGGACAGCTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCAGGATCACCCAGCTGTCCTCATTCTTACTCAGGCGCTTTGTAGCAAAATCTTCTGCGGCACTGTaGTATGCAGGCATATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KPRITQLSSFLLRRFVAKSSAAL*YAGIFL Trigger: AAGGAATATGCCTGCATATCACAGTGCCGCAGAAGA...TTTTGCTACAAAGCGCCTGAGTAAGAATGAGGACAGCTGGGTGATCCTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | AAGCCCAGGATCACCCAGCTGTCCTCATTCTTACTCAGGCGCTTTGTAGCAAAATGCGGCACTGTGATATaGAGGCATATTCCTTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: KPRITQLSSFLLRRFVAKCGTVI*RHIPSE Trigger: TTCGGAAGGAATATGCCTGCATATCACAGTGCCGCA...TTTTGCTACAAAGCGCCTGAGTAAGAATGAGGACAGCTGGGTGATCCTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR CCA 90 bp | TTGGCCGATTTCTGGTGCAATGAATGGCCCTCATATTTTGTGTTCTCCCTGAGGACAACCCAGGAAGTATaGACAGACACACGCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LADFWCNEWPSYFVFSLRTTQEV*TDTRCR Trigger: ACGACAGCGTGTGTCTGTCCATACTTCCTGGGTTGT...CCTCAGGGAGAACACAAAATATGAGGGCCATTCATTGCACCAGAAATCGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | GAATGGCCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTGCTGTCTCTGCCATCTaGTCTCATAGACAACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EWPSYFVFSLRHDFPFVSAVSAI*SHRQPR Trigger: CCTGGGTTGTCTATGAGATCAGATGGCAGAGACAGC...AGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | TTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGATCCCAACAAGGAACTGAGCCTTTTAGCCTaGACGTTTCATGGTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSLRHDFPFVSLHDPNKELSLLA*TFHGRS Trigger: GCTGCGACCATGAAACGTGCAGGCTAAAAGGCTCAG...TTCCTTGTTGGGATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | AAGATGAAGAAGCCCAGGATCACCCAGCTGTCCTCATTCTTACTCAGGCGCTTTGTTCAATTCCATAGCTaGCATTTTCCAACTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KMKKPRITQLSSFLLRRFVQFHS*HFPTAG Trigger: TCCTGCAGTTGGAAAATGTCAGCTATGGAATTGAAC...AAAGCGCCTGAGTAAGAATGAGGACAGCTGGGTGATCCTGGGCTTCTTCATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | CCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAAATGGCCGTTCAGTaGAAAGGTGTCAGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: PTRKVTMKGRKMKKPRITQMAVQ*KGVRNT Trigger: TGTGTTCCTGACACCTTTGCACTGAACGGCCATTTG...GGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | GAATGGCCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTATGCAGATCCCAACCTaGACAAATGGCCGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EWPSYFVFSLRHDFPFVSMQIPT*TNGRSV Trigger: CACTGAACGGCCATTTGTGCAGGTTGGGATCTGCAT...AGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR CCA 90 bp | ACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGCTGTCCTCATTCTCCTGCTCATTGAAATaGCCTTTATCAAGCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TMKGRKMKKPRITQLSSFSCSLK*PLSSWS Trigger: AGACCAGCTTGATAAAGGCCATTTCAATGAGCAGGA...GAATGAGGACAGCTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR CCA 90 bp | GATCCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATAAGTCTTCTTCCCACTaGAACTCAGTGCTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: DPNKESYDERQKDEEAQDKSSSH*NSVLPA Trigger: AGCAGGGAGCACTGAGTTCCAGTGGGAAGAAGACTT...ATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR CCA 90 bp | ATCCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCGTGTCAGGAACACAGTaGCTAGAGGATCCATCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IPTRKVTMKGRKMKKPRIVSGTQ*LEDPSQ Trigger: TTGCGATGGATCCTCTAGCCACTGTGTTCCTGACAC...GATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | GCCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCAAAAATGAGTGGTTCCTaGGATGCAGAGAGTAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ALIFCVLPEARFSFRFSSKMSGS*DAESRA Trigger: AGCCCTACTCTCTGCATCTCAGGAACCACTCATTTT...TGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACTCCCTGCTGCATTATaGATGGAGCGCTGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLPAAL*MERWDR Trigger: CCTGTCCCAGCGCTCCATGCATAATGCAGCAGGGAG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | ACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGTTGAGTGATAACCACTaGGAATCCCTCCAAACCTAT | + |
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Preference number: 4 (lower is better) Translates to: TRKVTMKGRKMKKPRITQLSDNH*ESLQTY Trigger: ATAGGTTTGGAGGGATTCTCAGTGGTTATCACTCAA...CTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | TTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGATCCCAACCAATACATGCACATTTaGCAGGTCACCAAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: FVFSLRHDFPFVSLHDPNQYMHI*QVTKTL Trigger: CAGTGTCTTGGTGACCTGTCAAATGTGCATGTATTG...GTTGGGATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR CCA 90 bp | GATCCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATTCTATCTGCCAAACATaGCTGTCATTTCCTGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: DPNKESYDERQKDEEAQDSICQT*LSFPAS Trigger: GCTAGCAGGAAATGACAGCCATGTTTGGCAGATAGA...ATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGCTGTCTCTGCCATCTaGTCTCATAGACAACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLAVSAI*SHRQPR Trigger: CCTGGGTTGTCTATGAGATCAGATGGCAGAGACAGC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000138232.2 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACGTGGCTCTATCTTCTaGGGCACTGTGATATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLRGSIF*GTVICR Trigger: CCTGCATATCACAGTGCCGCAGAAGATAGAGCCACG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR GCA 90 bp | ACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGTTTGGTTGCAATACATaGACATTTGACAGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: TRKVTMKGRKMKKPRITQFGCNT*TFDRSP Trigger: TGGTGACCTGTCAAATGTGCATGTATTGCAACCAAA...CTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACTGAGCCTTTTAGCCTaGACGTTTCATGGTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLSLLA*TFHGRS Trigger: GCTGCGACCATGAAACGTGCAGGCTAAAAGGCTCAG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGGCCAGAGCAGATGCTaGGTGTCACAATGGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLGQSRC*VSQWNL Trigger: CAAATTCCATTGTGACACTCAGCATCTGCTCTGGCC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | CCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCTTTTATCCTGCTCATTaGAATGGCCTTTATCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PTRKVTMKGRKMKKPRITFYPAH*NGLYQA Trigger: AGCTTGATAAAGGCCATTTCAATGAGCAGGATAAAA...GGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | GCCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCAGGCGTCTCCTGTAAATaGGTAAGTGTGTTATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALIFCVLPEARFSFRFSSGVSCK*VSVLFH Trigger: ATGAAATAACACACTTACTCATTTACAGGAGACGCC...TGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | ATCCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCCAGCACTCTTTAAATTaGCATTCCGTCTCATTACCA | + |
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Preference number: 4 (lower is better) Translates to: IPTRKVTMKGRKMKKPRIQHSLN*HSVSLP Trigger: TGGTAATGAGACGGAATGTCAATTTAAAGAGTGCTG...GATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAATGCAGATCCCAACCTaGACAAATGGCCGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLMQIPT*TNGRSV Trigger: CACTGAACGGCCATTTGTGCAGGTTGGGATCTGCAT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAAAGTCTTCTTCCCACTaGAACTCAGTGCTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLKSSSH*NSVLPA Trigger: AGCAGGGAGCACTGAGTTCCAGTGGGAAGAAGACTT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGTGTCAGGAACACAGTaGCTAGAGGATCCATCGCAA | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLVSGTQ*LEDPSQ Trigger: TTGCGATGGATCCTCTAGCCACTGTGTTCCTGACAC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAACAACCCAGGAAGTATaGACAGACACACGCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLTTQEV*TDTRCR Trigger: ACGACAGCGTGTGTCTGTCCATACTTCCTGGGTTGT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000138232.2 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATCTTCTGCGGCACTGTaGTATGCAGGCATATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLSSAAL*YAGIFL Trigger: AAGGAATATGCCTGCATATCACAGTGCCGCAGAAGA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAAAAATGAGTGGTTCCTaGGATGCAGAGAGTAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLKMSGS*DAESRA Trigger: AGCCCTACTCTCTGCATCTCAGGAACCACTCATTTT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | CCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATCTGCGTGTCAAAATTTaGAACATAGTGCATGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: PSYFVFSLRHDFPFVSLHLRVKI*NIVHVV Trigger: GACTACATGCACTATGTTTCAAATTTTGACACGCAG...ATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | TCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGATCATCGCAATATTCTGTaGAGTCACACTCTGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: SYFVFSLRHDFPFVSLHDHRNIL*SHTLGQ Trigger: TTGACCCAGAGTGTGACTTCACAGAATATTGCGATG...ATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACGATTTCTGGTGCAATaGATGGCATTTGTGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLRFLVQ*MAFVVH Trigger: GTGGACCACAAATGCCATTCATTGCACCAGAAATCG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATGCGGCACTGTGATATaGAGGCATATTCCTTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLCGTVI*RHIPSE Trigger: TTCGGAAGGAATATGCCTGCATATCACAGTGCCGCA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR GCA 90 bp | ATCCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCCAACATAGCTTTTACTaGATATTTCACCTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: IPTRKVTMKGRKMKKPRIQHSFY*IFHLVM Trigger: CATCACCAGGTGAAATATGCAGTAAAAGCTATGTTG...GATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
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| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACAAATGGCCGTTCAGTaGAAAGGTGTCAGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLQMAVQ*KGVRNT Trigger: TGTGTTCCTGACACCTTTGCACTGAACGGCCATTTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAAATGAATGGCATTTGTaGTCCACACACAGTGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLNEWHL*STHSAV Trigger: GACGGCACTGTGTGTGGACCACAAATGCCATTCATT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACAATACATGCACATTTaGCAGGTCACCAAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLQYMHI*QVTKTL Trigger: CAGTGTCTTGGTGACCTGTCAAATGTGCATGTATTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
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| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACATCGCAATATTCTGTaGAGTCACACTCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLHRNIL*SHTLGQ Trigger: TTGACCCAGAGTGTGACTTCACAGAATATTGCGATG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTGGCCGATTTCTGGTaGAATGAATGGCATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLADFW*NEWHLW Trigger: CCACAAATGCCATTCATTGCACCAGAAATCGGCCAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATCTATCTGCCAAACATaGCTGTCATTTCCTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLSICQT*LSFPAS Trigger: GCTAGCAGGAAATGACAGCCATGTTTGGCAGATAGA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACAAACCTATGTCTTCTaGATACATACCAACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLQTYVF*IHTNTR Trigger: GCGGGTGTTGGTATGTATCCAGAAGACATAGGTTTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATCCTTGGCCGATTTCTaGTGCAATGAATGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLSLADF*CNEWHL Trigger: CAAATGCCATTCATTGCACCAGAAATCGGCCAAGGA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGTTCAATTCCATAGCTaGCATTTTCCAACTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLVQFHS*HFPTAG Trigger: TCCTGCAGTTGGAAAATGTCAGCTATGGAATTGAAC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTGAGTGATAACCACTaGGAATCCCTCCAAACCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLSDNH*ESLQTY Trigger: ATAGGTTTGGAGGGATTCTCAGTGGTTATCACTCAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATCAAGCTGGTCTATCTaGCAAACATGGCTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLSSWSI*QTWLSF Trigger: AAATGACAGCCATGTTTGGCAGATAGACCAGCTTGA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATCCTGCTCATTGAAATaGCCTTTATCAAGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLSCSLK*PLSSWS Trigger: AGACCAGCTTGATAAAGGCCATTTCAATGAGCAGGA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGGCGTCTCCTGTAAATaGGTAAGTGTGTTATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLGVSCK*VSVLFH Trigger: ATGAAATAACACACTTACTCATTTACAGGAGACGCC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACTGCGTGTCAAAATTTaGAACATAGTGCATGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLRVKI*NIVHVV Trigger: GACTACATGCACTATGTTTCAAATTTTGACACGCAG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACAGCACTCTTTAAATTaGCATTCCGTCTCATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLQHSLN*HSVSLP Trigger: TGGTAATGAGACGGAATGTCAATTTAAAGAGTGCTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTTGGTTGCAATACATaGACATTTGACAGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLFGCNT*TFDRSP Trigger: TGGTGACCTGTCAAATGTGCATGTATTGCAACCAAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTTTATCCTGCTCATTaGAATGGCCTTTATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLFYPAH*NGLYQA Trigger: AGCTTGATAAAGGCCATTTCAATGAGCAGGATAAAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTTCGTTTCTCTTCATaGTCCCAACAAGGAAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLFRFSS*SQQGKL Trigger: TAACTTTCCTTGTTGGGATCATGAAGAGAAACGAAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR GCA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACAACATAGCTTTTACTaGATATTTCACCTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFSKSLRFKVYPPVTERLQHSFY*IFHLVM Trigger: CATCACCAGGTGAAATATGCAGTAAAAGCTATGTTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS GCA 90 bp | GCATCTCCGCCCTTGCGTGGCTCTATCTTCTGCGGCACTGTGATATaGAGGCATATTCCTTCCGAATCGAGGCGGGCAAACAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPPLRGSIFCGTVI*RHIPSESRRANSMA Trigger: TGCCATGCTGTTTGCCCGCCTCGATTCGGAAGGAATATGCCTGCATATCACAGTGCCGCAGAAGATAGAGCCACGCAAGGGCGGAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | GTCACCTTCCCTTCTGCATCTCCGCCCTTGCGTGGCTCTATCTTCTaGGGCACTGTGATATGCAGGCATATTCCTTCCGAATCGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTFPSASPPLRGSIF*GTVICRHIPSESRR Trigger: CCGCCTCGATTCGGAAGGAATATGCCTGCATATCACAGTGCCGCAGAAGATAGAGCCACGCAAGGGCGGAGATGCAGAAGGGAAGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | CTTTCCTACAGGGCGTGCCTGATGCTGACAGCTCACACGTGGGCATaGAGCAAGCTCCAGATCCACATTGTGCTGAGCCTTTTAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSYRACLMLTAHTWA*SKLQIHIVLSLLAC Trigger: GCAGGCTAAAAGGCTCAGCACAATGTGGATCTGGAGCTTGCTGCATGCCCACGTGTGAGCTGTCAGCATCAGGCACGCCCTGTAGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | ATGCAAGCTACAGTTGCTAAAAGTCTTCTTCCCACTGGAACTCAGTaGTCCCTGCTGCATTATGCATGGAGCGCTGGGACAGGAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: MQATVAKSLLPTGTQ*SLLHYAWSAGTGTI Trigger: AATTGTTCCTGTCCCAGCGCTCCATGCATAATGCAGCAGGGAGCACTGAGTTCCAGTGGGAAGAAGACTTTTAGCAACTGTAGCTTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | ATTGTAGCAATATGCAGATCCCAACCTGCACAAATGGCCGTTCAGTaGAAAGGTGTCAGGAACACAGTGGCTAGAGGATCCATCGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: IVAICRSQPAQMAVQ*KGVRNTVARGSIAI Trigger: TATTGCGATGGATCCTCTAGCCACTGTGTTCCTGACACCTTTGCACTGAACGGCCATTTGTGCAGGTTGGGATCTGCATATTGCTACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | TTCTTGGGCGGCCGAAAACAAGCTAATTTCCCACAGAGAACATCCTaGTGTCCGCAAGGTACCGAGTACGAGTCTTTAGAATCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGGRKQANFPQRTS*CPQGTEYESLESQF Trigger: AAACTGTGATTCTAAAGACTCGTACTCGGTACCTTGCGGACAGCAGGATGTTCTCTGTGGGAAATTAGCTTGTTTTCGGCCGCCCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | AGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGCTGTCCTCCACTTCTTAGTGGCGTaGCAGTCATTTCCTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYDERQKDEEAQDHPAVLHFLVA*QSFPVK Trigger: TTTCACAGGAAATGACTGCAACGCCACTAAGAAGTG...GAGGACAGCTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS TCA 90 bp | TCACATTCCTCACCAGCTTCCATGATTCCATTGCCACACACGGCTTaGTTTGGTTGCAATACATGCACATTTGACAGGTCACCAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSPASMIPLPHTA*FGCNTCTFDRSPRH Trigger: GTGTCTTGGTGACCTGTCAAATGTGCATGTATTGCAACCAAATCAAGCCGTGTGTGGCAATGGAATCATGGAAGCTGGTGAGGAATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS GCA 90 bp | CTACAGTTGCTAAAAGTCTTCTTCCCACTGGAACTCAGTGCTCCCTaGTGCATTATGCATGGAGCGCTGGGACAGGAACAATTTCTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LQLLKVFFPLELSAP*CIMHGALGQEQFLI Trigger: TATTAGAAATTGTTCCTGTCCCAGCGCTCCATGCATAATGCAGCAGGGAGCACTGAGTTCCAGTGGGAAGAAGACTTTTAGCAACTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS CCA 90 bp | GAATCCCCTGAGGCCAGAGCAGATGCTGAGTGTCACAATGGAATTTaGCACTTCATCAACATATCCTCGGTAATGGCAATGAGCCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ESPEARADAECHNGI*HFINISSVMAMSQK Trigger: TTTTTGGCTCATTGCCATTACCGAGGATATGTTGATGAAGTGCCAAATTCCATTGTGACACTCAGCATCTGCTCTGGCCTCAGGGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | CCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCTATGTGCTCAAACCTaGCTGAAGACTCCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PNKESYDERQKDEEAQDHLCAQT*LKTPVV Trigger: AACCACTGGAGTCTTCAGCAAGGTTTGAGCACATAG...GTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | AGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGCTGTCCTCGCAGCACTCTTTAAATaGACATTCCGTCTCATTACC | + |
|
Preference number: 5 (lower is better) Translates to: SYDERQKDEEAQDHPAVLAALFK*TFRLIT Trigger: GGTAATGAGACGGAATGTCAATTTAAAGAGTGCTGC...GAGGACAGCTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | TCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATGATGAGGCCCCATTCCCTTaGCACTTCTTAGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYFVFSLRHDFPFVSLHDEAPFP*HFLVAL Trigger: CAACGCCACTAAGAAGTGCAAAGGGAATGGGGCCTC...ATCATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | CCCAACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACGTGTCACAATGGAATTaGGCACTTCATCAACATATC | + |
|
Preference number: 5 (lower is better) Translates to: PNKESYDERQKDEEAQDHVSQWN*ALHQHI Trigger: GATATGTTGATGAAGTGCCAAATTCCATTGTGACAC...GTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAAAGTTACGATGAAAGGCAGAAAGATGAAGAAGCCCAGGATCACCCAGTTTTTATCCTGCTCATaGAAATGGCCTTTATCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRKVTMKGRKMKKPRITQFLSCS*KWPLSS Trigger: GCTTGATAAAGGCCATTTCAATGAGCAGGATAAAAA...CTGGGTGATCCTGGGCTTCTTCATCTTTCTGCCTTTCATCGTAACTTTCCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATGCAATGAATGGCATTaGTGGTCCACACACAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLCNEWH*WSTHSA Trigger: GGCACTGTGTGTGGACCACAAATGCCATTCATTGCA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
||
| CDS TCA 90 bp | TCTGACCACAATTCCAAGGAGGCTAACACAACACTCAATTTCAGCTaGGTGAGCATAGCGTTAACAAGACCAATAATCTGGAAAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDHNSKEANTTLNFS*VSIALTRPIIWKIF Trigger: GAAGATTTTCCAGATTATTGGTCTTGTTAACGCTATGCTCACTCAGCTGAAATTGAGTGTTGTGTTAGCCTCCTTGGAATTGTGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACTATGTGCTCAAACCTaGCTGAAGACTCCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLLCAQT*LKTPVV Trigger: AACCACTGGAGTCTTCAGCAAGGTTTGAGCACATAG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACATTTCCTGCTAGCATaGAGCTGTCGCTCTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLHFLLA*SCRSSL Trigger: AAGTGAAGAGCGACAGCTCAATGCTAGCAGGAAATG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACATATCCCATTCCCTTaGCACTTCTTAGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLHIPFP*HFLVAL Trigger: CAACGCCACTAAGAAGTGCAAAGGGAATGGGATATG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | CCCTCATATTTTGTGTTCTCCCTGAGGCACGATTTTCCTTTCGTTTCTCTTCATACTGCGTGTCAAAATTaGAAACATAGTGCATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSYFVFSLRHDFPFVSLHTACQN*KHSACS Trigger: ACTACATGCACTATGTTTCAAATTTTGACACGCAGT...ATGAAGAGAAACGAAAGGAAAATCGTGCCTCAGGGAGAACACAAAATATGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTACACTTCTTAGTGGCGTaGCAGTCATTTCCTGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLHFLVA*QSFPVK Trigger: TTTCACAGGAAATGACTGCAACGCCACTAAGAAGTG...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS TCA 90 bp | TTAGACTTTGAGGTAACAGTTGTGAATGATTTTTATCCTGCTCATTaGAATGGCCTTTATCAAGCTGGTCTATCTGCCAAACATGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDFEVTVVNDFYPAH*NGLYQAGLSAKHGC Trigger: ACAGCCATGTTTGGCAGATAGACCAGCTTGATAAAGGCCATTTCAATGAGCAGGATAAAAATCATTCACAACTGTTACCTCAAAGTCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGCAGCACTCTTTAAATaGACATTCCGTCTCATTACC | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLAALFK*TFRLIT Trigger: GGTAATGAGACGGAATGTCAATTTAAAGAGTGCTGC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGTGTCACAATGGAATTaGGCACTTCATCAACATATC | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLVSQWN*ALHQHI Trigger: GATATGTTGATGAAGTGCCAAATTCCATTGTGACAC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTATTTTTATCCTGCTCATaGAAATGGCCTTTATCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLFLSCS*KWPLSS Trigger: GCTTGATAAAGGCCATTTCAATGAGCAGGATAAAAA...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAACTGCGTGTCAAAATTaGAAACATAGTGCATGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLTACQN*KHSACS Trigger: ACTACATGCACTATGTTTCAAATTTTGACACGCAGT...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS-3UTR CAA 90 bp | TTATTTTCCAAAAGTCTGAGATTTAAAGTGTATCCACCGGTAACAGAGCGGTTAGTAGTCAGGAAAGCATaGGCAATTACCAAAGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSLRFKVYPPVTERLVVRKA*AITKVI Trigger: AATAACTTTGGTAATTGCCAATGCTTTCCTGACTAC...TAACCGCTCTGTTACCGGTGGATACACTTTAAATCTCAGACTTTTGGAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033957.12 |
||
| CDS TCA 72 bp | CTCCGCCCTTGCGTGGCTCTATCTTCTGCGGCACTGTaGTATGCAGGCATATTCCTTCCGAATCGAGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRPCVALSSAAL*YAGIFLPNRGG Trigger: CCCGCCTCGATTCGGAAGGAATATGCCTGCATATCACAGTGCCGCAGAAGATAGAGCCACGCAAGGGCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS GCA 72 bp | CCCTTGCGTGGCTCTATCTTCTGCGGCACTGTGATATaGAGGCATATTCCTTCCGAATCGAGGCGGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PLRGSIFCGTVI*RHIPSESRRAN Trigger: GTTTGCCCGCCTCGATTCGGAAGGAATATGCCTGCATATCACAGTGCCGCAGAAGATAGAGCCACGCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS GCA 72 bp | CCTTCTGCATCTCCGCCCTTGCGTGGCTCTATCTTCTaGGGCACTGTGATATGCAGGCATATTCCTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PSASPPLRGSIF*GTVICRHIPSE Trigger: TTCGGAAGGAATATGCCTGCATATCACAGTGCCGCAGAAGATAGAGCCACGCAAGGGCGGAGATGCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CCA 72 bp | TCCTTGGCCGATTTCTGGTGCAATGAATGGCATTTGTaGTCCACACACAGTGCCGTCAGCCACGTATGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SLADFWCNEWHL*STHSAVSHVCA Trigger: AGCGCATACGTGGCTGACGGCACTGTGTGTGGACCACAAATGCCATTCATTGCACCAGAAATCGGCCAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138232.2 |
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| CDS GCA 72 bp | ATATGCAGATCCCAACCTGCACAAATGGCCGTTCAGTaGAAAGGTGTCAGGAACACAGTGGCTAGAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: ICRSQPAQMAVQ*KGVRNTVARGS Trigger: GGATCCTCTAGCCACTGTGTTCCTGACACCTTTGCACTGAACGGCCATTTGTGCAGGTTGGGATCTGCATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS TCA 72 bp | ACCCGCAACATAGCTTTTACTGCATATTTCACCTGGTaGTGCCGCTCCGATGTATTTCGGGCGTCTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TRNIAFTAYFTW*CRSDVFRASPV Trigger: TACAGGAGACGCCCGAAATACATCGGAGCGGCATCACCAGGTGAAATATGCAGTAAAAGCTATGTTGCGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS GCA 72 bp | AAAGTCTTCTTCCCACTGGAACTCAGTGCTCCCTGCTaGATTATGCATGGAGCGCTGGGACAGGAACAATTT | + |
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Preference number: 6 (lower is better) Translates to: KVFFPLELSAPC*IMHGALGQEQF Trigger: AAATTGTTCCTGTCCCAGCGCTCCATGCATAATGCAGCAGGGAGCACTGAGTTCCAGTGGGAAGAAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS GCA 72 bp | GGCATCTTCCATTGTAGCAATATGCAGATCCCAACCTaGACAAATGGCCGTTCAGTGCAAAGGTGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GIFHCSNMQIPT*TNGRSVQRCQE Trigger: TTCCTGACACCTTTGCACTGAACGGCCATTTGTGCAGGTTGGGATCTGCATATTGCTACAATGGAAGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CCA 72 bp | AAATGGCCTTTATCAAGCTGGTCTATCTGCCAAACATaGCTGTCATTTCCTGCTAGCATTGAGCTGTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: KWPLSSWSICQT*LSFPASIELSL Trigger: GAGCGACAGCTCAATGCTAGCAGGAAATGACAGCCATGTTTGGCAGATAGACCAGCTTGATAAAGGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CCA 72 bp | AAATGGCCGTTCAGTGCAAAGGTGTCAGGAACACAGTaGCTAGAGGATCCATCGCAATATTCTGTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: KWPFSAKVSGTQ*LEDPSQYSVKS Trigger: TGACTTCACAGAATATTGCGATGGATCCTCTAGCCACTGTGTTCCTGACACCTTTGCACTGAACGGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CAA 90 bp | CAAGCTGGTCTATCTGCCAAACATGGCTGTCATTTCCTGCTAGCATaGAGCTGTCGCTCTTCACTTGATAAACTATGTGCTCAAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: QAGLSAKHGCHFLLA*SCRSSLDKLCAQTL Trigger: CAAGGTTTGAGCACATAGTTTATCAAGTGAAGAGCGACAGCTCAATGCTAGCAGGAAATGACAGCCATGTTTGGCAGATAGACCAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS TCA 72 bp | TCACCAGCTTCCATGATTCCATTGCCACACACGGCTTaGTTTGGTTGCAATACATGCACATTTGACAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPASMIPLPHTA*FGCNTCTFDRS Trigger: TGACCTGTCAAATGTGCATGTATTGCAACCAAATCAAGCCGTGTGTGGCAATGGAATCATGGAAGCTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS GCA 72 bp | CTGGATACATACCAACACCCGCAACATAGCTTTTACTaGATATTTCACCTGGTGATGCCGCTCCGATGTATT | + |
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Preference number: 6 (lower is better) Translates to: LDTYQHPQHSFY*IFHLVMPLRCI Trigger: AATACATCGGAGCGGCATCACCAGGTGAAATATGCAGTAAAAGCTATGTTGCGGGTGTTGGTATGTATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CAA 72 bp | CTATCTGCCAAACATGGCTGTCATTTCCTGCTAGCATaGAGCTGTCGCTCTTCACTTGATAAACTATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSAKHGCHFLLA*SCRSSLDKLCA Trigger: AGCACATAGTTTATCAAGTGAAGAGCGACAGCTCAATGCTAGCAGGAAATGACAGCCATGTTTGGCAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CAA 72 bp | CACACACGGCTTGATTTGGTTGCAATACATGCACATTaGACAGGTCACCAAGACACTGCGTGTCAAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: HTRLDLVAIHAH*TGHQDTACQNL Trigger: CAAATTTTGACACGCAGTGTCTTGGTGACCTGTCAAATGTGCATGTATTGCAACCAAATCAAGCCGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS TCA 72 bp | TCCTATGTGAAGGCCAATCAGTTGAGTGATAACCACTaGGAATCCCTCCAAACCTATGTCTTCTGGATACAT | + |
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Preference number: 6 (lower is better) Translates to: SYVKANQLSDNH*ESLQTYVFWIH Trigger: ATGTATCCAGAAGACATAGGTTTGGAGGGATTCTCAGTGGTTATCACTCAACTGATTGGCCTTCACATAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CCA 72 bp | TTTTTATCCTGCTCATTGAAATGGCCTTTATCAAGCTaGTCTATCTGCCAAACATGGCTGTCATTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLSCSLKWPLSS*SICQTWLSFPA Trigger: AGCAGGAAATGACAGCCATGTTTGGCAGATAGACCAGCTTGATAAAGGCCATTTCAATGAGCAGGATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CAA 72 bp | CATTTGACAGGTCACCAAGACACTGCGTGTCAAAATTaGAAACATAGTGCATGTAGTCATGCAAGCTACAGT | + |
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Preference number: 6 (lower is better) Translates to: HLTGHQDTACQN*KHSACSHASYS Trigger: ACTGTAGCTTGCATGACTACATGCACTATGTTTCAAATTTTGACACGCAGTGTCTTGGTGACCTGTCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS CAA 72 bp | GTGGCGTTGCAGTCATTTCCTGTGAAATTAACTTCTTaGCAGGTTCCGTTTATACAATACATTTGTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VALQSFPVKLTS*QVPFIQYICGP Trigger: TGGACCACAAATGTATTGTATAAACGGAACCTGCAAAGAAGTTAATTTCACAGGAAATGACTGCAACGCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS TCA 72 bp | GAGGTAACAGTTGTGAATGATTTTTATCCTGCTCATTaGAATGGCCTTTATCAAGCTGGTCTATCTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: EVTVVNDFYPAH*NGLYQAGLSAK Trigger: TTTGGCAGATAGACCAGCTTGATAAAGGCCATTTCAATGAGCAGGATAAAAATCATTCACAACTGTTACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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| CDS TCA 72 bp | TGTAAAATATCAGTAGCATTTCCGTCAGTAGAAATATaGTTTTTATCTGACCACAATTCCAAGGAGGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: CKISVAFPSVEI*FLSDHNSKEAN Trigger: GTTAGCCTCCTTGGAATTGTGGTCAGATAAAAATCATATTTCTACTGACGGAAATGCTACTGATATTTTACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033957.12 ENSMUST00000173833.3 |
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