Pregenerated sensors for ADAM10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054693Ensembl transcript IDs: ENSMUST00000067880.13, ENSMUST00000140205.8, ENSMUST00000144537.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATTTGATAACTCTCTCGGGGCCTCTGACGCGGGGGCTGCTGAATaGGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: PFDNSLGASDAGAAE*AVAVSSSLKCLEVV Trigger: AACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCCCATTCAGCAGCCCCCGCGTCAGAGGCCCCGAGAGAGTTATCAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | TTACATGGAGAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTaGTTGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: LHGEPGCRVIVRPLN*LLHCKEPVLAQVDG Trigger: TCCATCAACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTCTCCATGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | ACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTaGAAGCCATCAGCTGCGTTCTTCAGCACAGCCTCTCCTGCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TKRADSEAKCCCCPV*KPSAAFFSTASPAH Trigger: GTGAGCAGGAGAGGCTGTGCTGAAGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR CCA 90 bp | TGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTaGGCAAAGGGCTGTGAAGCCATTGCATATCCCTTCCTTTGCACA | + |
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Preference number: 1 (lower is better) Translates to: CVPVTVCKVGLGIRC*AKGCEAIAYPFLCT Trigger: TGTGCAAAGGAAGGGATATGCAATGGCTTCACAGCCCTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | AGCAGAAATCAGACATCTACAAAAAGAGCTGACTCTGAAGCCAAATaGTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SRNQTSTKRADSEAK*CCCPVCKPSAAFFS Trigger: GCTGAAGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGATGTCTGATTTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR GCA 90 bp | TCACAAATAGAACCTGCACATTGCCCATTAATGCACACTTGTGTGTaGCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SQIEPAHCPLMHTCV*LLQSVKLGLGSDAG Trigger: CCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTaGACATTGCCCATTAATGCACACTTGTGTGTGCCTGTTACAGTC | + |
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Preference number: 1 (lower is better) Translates to: GTGALLQVILFTNRT*TLPINAHLCVPVTV Trigger: GACTGTAACAGGCACACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR TCA 90 bp | AGGGTATCATTTGCAGATGATGACTTAACAGGTTTCTCTTTGGAGTaGAGTTTTCCCACTGTAGGCACTAGGAAGAACCAAGGCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: RVSFADDDLTGFSLE*SFPTVGTRKNQGKS Trigger: GCTTTTGCCTTGGTTCTTCCTAGTGCCTACAGTGGGAAAACTTCACTCCAAAGAGAAACCTGTTAAGTCATCATCTGCAAATGATACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
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| 3UTR TCA 90 bp | GGAAGTGGTTTAGGAGGCGGCAACTTTGGATTACTACTTGGAGTGTaGACACTGCAAATCTTGATAAATCCAGCCATTAACATGATCAGG | + |
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Preference number: 1 (lower is better) Translates to: GSGLGGGNFGLLLGV*TLQILINPAINMIR Trigger: CCTGATCATGTTAATGGCTGGATTTATCAAGATTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAGTTGCCGCCTCCTAAACCACTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | CCATTTTCTTCATGCAGCAAACATGGCATAATTCCTTATCATCTTTaGCATCAGAGCTGGCACAGGTGCACTCCTCCAAGTCATACTTTT | + |
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Preference number: 1 (lower is better) Translates to: PFSSCSKHGIIPYHL*HQSWHRCTPPSHTF Trigger: AAAAGTATGACTTGGAGGAGTGCACCTGTGCCAGCTCTGATGGCAAAGATGATAAGGAATTATGCCATGTTTGCTGCATGAAGAAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 90 bp | CATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTaGACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAG | + |
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Preference number: 1 (lower is better) Translates to: HFKTACIKHYRILDH*TPPFSVILSMSIKQ Trigger: CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCAGTACTGCCCACCAGTaGGCCACAATCCACTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGSTAHQ*ATIHSA Trigger: TGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACT...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR CAA 90 bp | CATGGAGAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTaGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTTGATGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: HGEPGCRVIVRPLNC*LHCKEPVLAQVDGA Trigger: GGCTCCATCAACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTCTCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCCCTGATCTGAGGACATaGTCTCTTGCCATTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGPDLRT*SLAIFL Trigger: AAGAAAAATGGCAAGAGATCATGTCCTCAGATCAGG...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCATGCACACTTGTGTGTaGCTGTTACAGTCTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGMHTCV*LLQSVK Trigger: CTTTACAGACTGTAACAGGCACACACAAGTGTGCAT...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTACTGCCCACCAGTGAGCCACAATCCACTCAGCAATGTTTTCATAGAGTTGGGGCTTGGGATCAGATaGTGGGCAAAGGGCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QYCPPVSHNPLSNVFIELGLGIR*WAKGCE Trigger: TTCACAGCCCTTTGCCCAGCATCTGATCCCAAGCCC...CAACTCTATGAAAACATTGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCTCAGGCTTTAAATTTTaGGTAATTCCACCTGATCTG | + |
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Preference number: 2 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGSGFKF*VIPPDL Trigger: CAGATCAGGTGGAATTACTCAAAATTTAAAGCCTGA...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGCAACCTTCTCTAGATTaGCTCCTATGTAAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVQPSLD*LLCKAR Trigger: CCTGGCTTTACATAGGAGGCAATCTAGAGAAGGTTG...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACTGCAAAGAGCCATTTTCTTCATaGAGCAAACATGGCATAATT | + |
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Preference number: 2 (lower is better) Translates to: EPGCRVIVRPLNCLLHCKEPFSS*SKHGII Trigger: AATTATGCCATGTTTGCTGCATGAAGAAAATGGCTC...TTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGCAAAAGCTGCATTAGCGTCGCATGTGTCCCATTTGATAACTCTCTCGAACTGCTTGCTCCACTaGAAAGAGCCTGTACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TKAKAALASHVSHLITLSNCLLH*KEPVLA Trigger: TGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTT...CGAGAGAGTTATCAAATGGGACACATGCGACGCTAATGCAGCTTTTGCCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGCAAAAGCTGCATTAGCGTCGCATGTGTCCCATTTGATAACTCTCTCGGCAAAGAGCCTGTACTaGCACAAGTTGATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TKAKAALASHVSHLITLSAKSLY*HKLMEP Trigger: TGGCTCCATCAACTTGTGCCAGTACAGGCTCTTTGC...CGAGAGAGTTATCAAATGGGACACATGCGACGCTAATGCAGCTTTTGCCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGGCATATCCCTTCCTTTaGACAGTCAGAATCATCCCG | + |
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Preference number: 2 (lower is better) Translates to: GTGALLQVILFTNRTCTLAYPFL*TVRIIP Trigger: CGGGATGATTCTGACTGTGCAAAGGAAGGGATATGC...CAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCCCTGATCTGAGGACATaGTCTCTTGCCATTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: QVYKERSHCFSSGFGLAGPDLRT*SLAIFL Trigger: AAGAAAAATGGCAAGAGATCATGTCCTCAGATCAGG...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR GCA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCCAGCACAGCCTCTCCTaGTCACAGCAGCCATGTAAC | + |
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Preference number: 2 (lower is better) Translates to: HFRNANPLPTFAQSKNKGQHSLS*SQQPCN Trigger: GTTACATGGCTGCTGTGAGCAGGAGAGGCTGTGCTG...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CCA 90 bp | TCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGTACAAGGTATGTACATTaGCAAGTGATGTATCCAATG | + |
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Preference number: 2 (lower is better) Translates to: SHCFSSGFGLAGSRHIVSTRYVH*QVMYPM Trigger: CATTGGATACATCACTTGCCAATGTACATACCTTGT...ACTCACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CCA 90 bp | CAGACATCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTAGCATTACAGAATCCTaGACCACTGCACACCACCAT | + |
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Preference number: 2 (lower is better) Translates to: QTSTKRADSEAKCCCCPVSITES*TTAHHH Trigger: ATGGTGGTGTGCAGTGGTCCAGGATTCTGTAATGCT...AACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGATGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR TCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCTTGAGTAATTCCACCTaGTCTGAGGACATGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: SFQNCLHKALQNPGPLHTLSNST*SEDMIS Trigger: AGAGATCATGTCCTCAGATCAGGTGGAATTACTCAA...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCTCAGGCTTTAAATTTTaGGTAATTCCACCTGATCTG | + |
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Preference number: 2 (lower is better) Translates to: KVCTLASDVSNVEVVEPPSGFKF*VIPPDL Trigger: CAGATCAGGTGGAATTACTCAAAATTTAAAGCCTGA...GGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTCATTTCAAAACTGCCTaGATAAAGCATTACAGAATC | + |
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Preference number: 2 (lower is better) Translates to: TLKPNAVAVQFASHQLRSHFKTA*IKHYRI Trigger: GATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATG...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR GCA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCGCCCCCTCCATTTTCTaGATAGCGATAAGCCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: HFRNANPLPTFAQSKNKGAPSIF*IAISLL Trigger: TAACAGGCTTATCGCTATGCAGAAAATGGAGGGGGC...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTATTCCTTATCATCTTTaGCATCAGAGCTGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: ILINPAINMIRAIPISSTIPYHL*HQSWHR Trigger: CCTGTGCCAGCTCTGATGGCAAAGATGATAAGGAAT...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR GCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCGAGGACATGATCTCTTaGCATTTTTCTTCAACTATT | + |
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Preference number: 2 (lower is better) Translates to: SFQNCLHKALQNPGPLHTEDMIS*HFSSTI Trigger: AATAGTTGAAGAAAAATGGCAAGAGATCATGTCCTC...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR GCA 72 bp | GAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTaGTTGCTCCACTGCAAAGAGCCTGTACTGGCACAA | + |
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Preference number: 3 (lower is better) Translates to: EPGCRVIVRPLN*LLHCKEPVLAQ Trigger: TTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR CAA 90 bp | CATGGAGAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACCCCATTAATGCACACTaGTGTGTGCCTGTTACAGTC | + |
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Preference number: 3 (lower is better) Translates to: HGEPGCRVIVRPLNCLLHPINAH*CVPVTV Trigger: GACTGTAACAGGCACACACAAGTGTGCATTAATGGG...GTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTCTCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR TCA 72 bp | AGTTGGGCTTGGGATCAGATGCTGGGCAAAGGGCTGTaGAGCCATTGCATATCCCTTCCTTTGCACAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SWAWDQMLGKGL*SHCISLPLHSQ Trigger: CTGACTGTGCAAAGGAAGGGATATGCAATGGCTTCACAGCCCTTTGCCCAGCATCTGATCCCAAGCCCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 72 bp | GCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTaGAAGCCATCAGCTGCGTTCTTCAGCACAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ADSEAKCCCCPV*KPSAAFFSTAS Trigger: AGAGGCTGTGCTGAAGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CAA 90 bp | CATGGAGAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACCTGTTCATAAGAAAATaGGGTTCCTTTTCCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: HGEPGCRVIVRPLNCLLHLFIRK*GSFSIP Trigger: TGGGATGGAAAAGGAACCCAATTTTCTTATGAACAG...GTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCACTTTGGATTACTACTaGGAGTGTGAACACTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGTLDYY*ECEHCK Trigger: TTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAGT...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR CCA 72 bp | GTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTaGGCAAAGGGCTGTGAAGCCATTGCATATCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: VTVCKVGLGIRC*AKGCEAIAYPF Trigger: GAAGGGATATGCAATGGCTTCACAGCCCTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR CAA 90 bp | CCACTGAACTGCTTGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTTGATGGATTACAGTCTGTAAAGTaGGGCTTGGGATCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: PLNCLLHCKEPVLAQVDGLQSVK*GLGSDA Trigger: AGCATCTGATCCCAAGCCCAACTTTACAGACTGTAA...TCCATCAACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 72 bp | CAGACATCTACAAAAAGAGCTGACTCTGAAGCCAAATaGTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCG | + |
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Preference number: 3 (lower is better) Translates to: QTSTKRADSEAK*CCCPVCKPSAA Trigger: CGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGATGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR GCA 72 bp | CCCACTGTAGGCACTAGGAAGAACCAAGGCAAAAGCTaGATTAGCGTCGCATGTGTCCCATTTGATAACTCT | + |
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Preference number: 3 (lower is better) Translates to: PTVGTRKNQGKS*ISVACVPFDNS Trigger: AGAGTTATCAAATGGGACACATGCGACGCTAATGCAGCTTTTGCCTTGGTTCTTCCTAGTGCCTACAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR-3UTR CAA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGGTGATGTATCCAATGTaGAGGTGGTCGAGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: STKRADSEAKCCCCPVCKVMYPM*RWSSLP Trigger: TGGGAGGCTCGACCACCTCAACATTGGATACATCAC...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CAA 90 bp | CTTTGGATTACTACTTGGAGTGTGAACACTGCAAATCTTGATAAATCCAGCCATCGACCACTGAACTGCTaGCTCCACTGCAAAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LWITTWSVNTANLDKSSHRPLNC*LHCKEP Trigger: AGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCG...ATGGCTGGATTTATCAAGATTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| 3UTR GCA 72 bp | ACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTaGACACCACCATTCTCTGTTATCCTGAGTATGTCA | + |
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Preference number: 3 (lower is better) Translates to: TACIKHYRILDH*TPPFSVILSMS Trigger: TGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CAA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTCTGTTCATAAGAAAATaGGGTTCCTTTTCCATCCCA | + |
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Preference number: 3 (lower is better) Translates to: VPRTVQVYKERSHCFSSGLFIRK*GSFSIP Trigger: TGGGATGGAAAAGGAACCCAATTTTCTTATGAACAG...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR-3UTR CAA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCCTGTTGCTGTCCAGTTaGCAAGCCATCAGCTGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: HFRNANPLPTFAQSKNKGLLLSS*QAISCV Trigger: AACGCAGCTGATGGCTTGCAAACTGGACAGCAACAG...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR GCA 72 bp | GCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTaGACATTGCCCATTAATGCACACTTGTGTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALLQVILFTNRT*TLPINAHLCVP Trigger: AGGCACACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTACAGAATTAGCAGGCTaGAAGTATATGGAATACACA | + |
|
Preference number: 3 (lower is better) Translates to: VPRTVQVYKERSHCFSSGTELAG*KYMEYT Trigger: TGTGTATTCCATATACTTCAAGCCTGCTAATTCTGT...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATTTTCTTCATGCAGCAAACATGGCATAATTCCTTATCATCTTTGCCATAGGGCTGTGAAGCCATaGCATATCCCTTCCTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EPFSSCSKHGIIPYHLCHRAVKP*HIPSFA Trigger: TGCAAAGGAAGGGATATGCAATGGCTTCACAGCCCT...ATGGCAAAGATGATAAGGAATTATGCCATGTTTGCTGCATGAAGAAAATGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| 3UTR CCA 72 bp | AAGTGGTTTAGGAGGCGGCAACTTTGGATTACTACTTaGAGTGTGAACACTGCAAATCTTGATAAATCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KWFRRRQLWITT*SVNTANLDKSS Trigger: GCTGGATTTATCAAGATTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAGTTGCCGCCTCCTAAACCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| 3UTR TCA 72 bp | TTTGCAGATGATGACTTAACAGGTTTCTCTTTGGAGTaGAGTTTTCCCACTGTAGGCACTAGGAAGAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: FADDDLTGFSLE*SFPTVGTRKNQ Trigger: TTGGTTCTTCCTAGTGCCTACAGTGGGAAAACTTCACTCCAAAGAGAAACCTGTTAAGTCATCATCTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| 3UTR TCA 72 bp | ACGTCGAAAAACCTATCTACAATTTCAACTACCTGCTaGGCAAATCACCCATCTCTAGTGGTTACCAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSKNLSTISTTC*ANHPSLVVTSD Trigger: ATCACTGGTAACCACTAGAGATGGGTGATTTGCTCAGCAGGTAGTTGAAATTGTAGATAGGTTTTTCGACGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR TCA 72 bp | TTAGGAGGCGGCAACTTTGGATTACTACTTGGAGTGTaGACACTGCAAATCTTGATAAATCCAGCCATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LGGGNFGLLLGV*TLQILINPAIN Trigger: GTTAATGGCTGGATTTATCAAGATTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAGTTGCCGCCTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| 3UTR CCA 72 bp | CAAGTTGATGGAGCCATTTTCTTCATGCAGCAAACATaGCATAATTCCTTATCATCTTTGCCATCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QVDGAIFFMQQT*HNSLSSLPSEL Trigger: CAGCTCTGATGGCAAAGATGATAAGGAATTATGCCATGTTTGCTGCATGAAGAAAATGGCTCCATCAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGAACAAGGTATGTACATaGGCAAGTGATGTATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: STKRADSEAKCCCCPVCKNKVCT*ASDVSN Trigger: ATTGGATACATCACTTGCCAATGTACATACCTTGTT...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCATTTTCTTCATGCAGCAAACATGGCATAATTCCTTATCATCTTTGCCATAATAGAACCTGCACATaGCCCATTAATGCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EPFSSCSKHGIIPYHLCHNRTCT*PINAHL Trigger: CAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATT...ATGGCAAAGATGATAAGGAATTATGCCATGTTTGCTGCATGAAGAAAATGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACTGCAAAAAAGGATTTCCATACTaGCCTCCCAGCCCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPGCRVIVRPLNCLLHCKKGFPY*PPSPAA Trigger: GGCGGCGGGGCTGGGAGGTCAGTATGGAAATCCTTT...TTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGGCGGTCTCCTCCTCTTTAAAGTGCCTGGAAGTGGTTTAGGAGGCGGCCACACTGTGCTGCACTaGTTCCCAGGCTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCGGLLLFKVPGSGLGGGHTVLH*FPGFSL Trigger: CAAGCTGAAGCCTGGGAAGCAGTGCAGCACAGTGTG...GCCGCCTCCTAAACCACTTCCAGGCACTTTAAAGAGGAGGAGACCGCCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAAAGGATTTCCATACTaGCCTCCCAGCCCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVKGFPY*PPSPAA Trigger: GGCGGCGGGGCTGGGAGGTCAGTATGGAAATCCTTT...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR CAA 72 bp | CCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTaGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGCRVIVRPLNC*LHCKEPVLAQV Trigger: AACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGATGCTTCTCTGGATGTaGCCGGGCTCCTTCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVMLLWM*PGSFLY Trigger: GTAGAGGAAGGAGCCCGGGCACATCCAGAGAAGCAT...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGGTCCTTGACTCGGACTaGACTGCTTCCCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVVLDSD*TASQAS Trigger: TGAAGCCTGGGAAGCAGTGCAGTCCGAGTCAAGGAC...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | CATGGAGAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACGCTCGTTTGGCACGCTaGTGTTTTTGGTGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGEPGCRVIVRPLNCLLHARLAR*CFWCNE Trigger: TTCATTACACCAAAAACACCAGCGTGCCAAACGAGC...GTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTCTCCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTGGGCAAAGAGCAGCATGCTTCTCTaGATGTGCCCGGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVPVTVCKVGLGIRCWAKSSMLL*MCPGSF Trigger: GAAGGAGCCCGGGCACATCCAGAGAAGCATGCTGCT...CTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCTTTGCCATCAGAGCTaGCACAGGTGCACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LASDVSNVEVVEPPSLDWLCHQS*HRCTPP Trigger: TGGAGGAGTGCACCTGTGCCAGCTCTGATGGCAAAG...CCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | ATAGTCCGACCACTGAACTGCTTGCTCCACTGCAAAGAGCCTGTACTGGCACAACAAAATCCCGGTCTGTaGAGACATAGGCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVRPLNCLLHCKEPVLAQQNPGL*RHRPGS Trigger: ACTGCCTGGCCTATGTCTTCACAGACCGGGATTTTG...TTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCGTACAGCAGGGTCCTTaGCTCGGACTGCACTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVCTLASDVSNVEVVEPPVQQGP*LGLHCF Trigger: GAAGCAGTGCAGTCCGAGTCAAGGACCCTGCTGTAC...GGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTCCACTACTAGCAGCATaGTTCTCTGGATGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPNAVAVQFASHQLRSPLLAA*FSGCAR Trigger: CCGGGCACATCCAGAGAAGCATGCTGCTAGTAGTGG...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | TGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCAACTGCTTGCTCCACTaGAAAGAGCCTGTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQVMYPMLRWSSLPALIGNCLLH*KEPVLA Trigger: TGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTT...GCCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | AAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGTACTGCCCACCAGTaGGCCACAATCCACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVCTLASDVSNVEVVEPPSTAHQ*ATIHSA Trigger: TGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACT...GGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR CAA 72 bp | ATGCACACTTGTGTGTGCCTGTTACAGTCTGTAAAGTaGGGCTTGGGATCAGATGCTGGGCAAAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MHTCVCLLQSVK*GLGSDAGQRAV Trigger: CACAGCCCTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACACAAGTGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTAAACTGGTCCTCATGTaGGACTGCTCGTTTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VPRTVQVYKERSHCFSSGKLVLM*DCSFGT Trigger: CGTGCCAAACGAGCAGTCTCACATGAGGACCAGTTT...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCAAAAGCTGCATTAGCGTCGCATGTGTCCCATTTGATAACTCTCTCGAAACTGGTCCTCATGTaGGACTGCTCGTTTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TKAKAALASHVSHLITLSKLVLM*DCSFGT Trigger: CGTGCCAAACGAGCAGTCTCACATGAGGACCAGTTT...CGAGAGAGTTATCAAATGGGACACATGCGACGCTAATGCAGCTTTTGCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGCAGCAATCATCTTTaGACTGGTCACTGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVSSNHL*TGHCSH Trigger: GTGGCTACAGTGACCAGTGCAAAGATGATTGCTGCT...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGAGCAGCATGCTTCTCTaGATGTGCCCGGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STKRADSEAKCCCCPVCKSSMLL*MCPGSF Trigger: GAAGGAGCCCGGGCACATCCAGAGAAGCATGCTGCT...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | CAGTACTGCCCACCAGTGAGCCACAATCCACTCAGCAATGTTTTCATAGAGTTGTCCCCTCTGGCTGGTTaGCATCGAAGCAGCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYCPPVSHNPLSNVFIELSPLAG*HRSSNH Trigger: ATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGA...CAACTCTATGAAAACATTGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCGGGCTTGGGATCAGATaGTGGGCAAAGGGCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTGLGIR*WAKGCE Trigger: TTCACAGCCCTTTGCCCAGCATCTGATCCCAAGCCC...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCGCACGCTGGTGTTTTTaGTGTAATGAATCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVMYPMLRWSSLPALIGARWCF*CNESTL Trigger: CAATGTGGATTCATTACACCAAAAACACCAGCGTGC...GCCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGGCTCGTTTGGCACGCTaGTGTTTTTGGTGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVARLAR*CFWCNE Trigger: TTCATTACACCAAAAACACCAGCGTGCCAAACGAGC...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGTTCTTCCCCTCTGGCTaGTTGGCATCGAAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTGALLQVILFTNRTCTLFFPSG*LASKQQ Trigger: TTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAA...CAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCGCAAAGAGCCTGTACTaGCACAAGTTGATGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVYKERSHCFSSGFGLAGAKSLY*HKLMEP Trigger: TGGCTCCATCAACTTGTGCCAGTACAGGCTCTTTGC...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| 3UTR CAA 72 bp | ACAAGGTATGTACATTGGCAAGTGATGTATCCAATGTaGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRYVHWQVMYPM*RWSSLPALIGS Trigger: ACTGCCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGTCAATGACAGACCCATaGCTAAAGCTTCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVSMTDP*LKLPSS Trigger: TGAAGAAGGAAGCTTTAGTCATGGGTCTGTCATTGA...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCCAAAATCCCGGTCTGTaGAGACATAGGCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTQNPGL*RHRPGS Trigger: ACTGCCTGGCCTATGTCTTCACAGACCGGGATTTTG...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | GAGCCCGGCTGCAGAGTGATAGTCCGACCACTGAACTGCTTGCTCCACTGCAAATTTAATGTATCTCTCTaGTGGCTCAATGTAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: EPGCRVIVRPLNCLLHCKFNVSL*WLNVKR Trigger: ACGTTTTACATTGAGCCAGCAGAGAGATACATTAAA...TTTGCAGTGGAGCAAGCAGTTCAGTGGTCGGACTATCACTCTGCAGCCGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGATGCACACTTGTGTGTaGCTGTTACAGTCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVMHTCV*LLQSVK Trigger: CTTTACAGACTGTAACAGGCACACACAAGTGTGCAT...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | AGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAATGTATCTCTCTGCTaGCTCAATGTAAAACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSHCFSSGFGLAGSRHIVNVSLC*LNVKRA Trigger: GGCACGTTTTACATTGAGCCAGCAGAGAGATACATT...CACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | CCACTGAACTGCTTGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTTGATGGAAATGTATCTCTCTGCTaGCTCAATGTAAAACGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNCLLHCKEPVLAQVDGNVSLC*LNVKRA Trigger: GGCACGTTTTACATTGAGCCAGCAGAGAGATACATT...TCCATCAACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCTCCCCTCTGGCTGGTTaGCATCGAAGCAGCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTSPLAG*HRSSNH Trigger: ATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGA...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCTTCTTCCCCTCTGGCTaGTTGGCATCGAAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTFFPSG*LASKQQ Trigger: TTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAA...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCAGGAGGCGGCAACTTTaGATTACTACTTGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QVYKERSHCFSSGFGLAGRRRQL*ITTWSV Trigger: CACACTCCAAGTAGTAATCCAAAGTTGCCGCCTCCT...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTTCTTCATTCGTAGGTTaGACTGTCTTCCATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPNAVAVQFASHQLRSSSFVG*TVFHEH Trigger: ATGCTCATGGAAGACAGTTCAACCTACGAATGAAGA...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | TGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTGGGCAAAGCCCAGATGTTGCTCTTaGATACATGATGTAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CVPVTVCKVGLGIRCWAKPRCCS*IHDVIA Trigger: GGCAATTACATCATGTATGCAAGAGCAACATCTGGG...CTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCTTGAATGCACACTGTaGTGTACAGCAGGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STKRADSEAKCCCCPVCKLECTL*CTAGSL Trigger: CAAGGACCCTGCTGTACAGCACAGTGTGCATTCAAG...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | TCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGTATAGAACCTGCACATTaGCCATTAATGCACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHCFSSGFGLAGSRHIVSIEPAH*PLMHTC Trigger: ACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTAT...ACTCACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCGTGAGACTGCTCGTTTaGCACGCTGGTGTTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTVRLLV*HAGVFG Trigger: ACCAAAAACACCAGCGTGCCAAACGAGCAGTCTCAC...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGTTCTAGAAGTAAAAACTaGTCCTCATGTGAGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHCFSSGFGLAGSRHIVSSRSKN*SSCETA Trigger: AGCAGTCTCACATGAGGACCAGTTTTTACTTCTAGA...ACTCACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | CAGTACTGCCCACCAGTGAGCCACAATCCACTCAGCAATGTTTTCATAGAGTTGTCAATGACAGACCCATaGCTAAAGCTTCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QYCPPVSHNPLSNVFIELSMTDP*LKLPSS Trigger: TGAAGAAGGAAGCTTTAGTCATGGGTCTGTCATTGA...CAACTCTATGAAAACATTGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTCTTCTTCTTGCCATCTaGATACAACTTGCTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKPNAVAVQFASHQLRSLLLAI*IQLAFL Trigger: GAGAAAAGCAAGTTGTATTCAGATGGCAAGAAGAAG...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTTTCAGACTTTGACTTaGATGCACACTGTGCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QVYKERSHCFSSGFGLAGFQTLT*MHTVLY Trigger: GTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAAA...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR TCA 90 bp | TCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGTTTACTACTTGGAGTGTaGACACTGCAAATCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SHCFSSGFGLAGSRHIVSLLLGV*TLQILI Trigger: TATCAAGATTTGCAGTGTTCACACTCCAAGTAGTAA...ACTCACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTATGCTTCTCTGGATGTaGCCGGGCTCCTTCCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTMLLWM*PGSFLY Trigger: GTAGAGGAAGGAGCCCGGGCACATCCAGAGAAGCAT...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | CAGACATCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTGCATATCCCTTCCTTTaGACAGTCAGAATCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTSTKRADSEAKCCCCPVAYPFL*TVRIIP Trigger: CGGGATGATTCTGACTGTGCAAAGGAAGGGATATGC...AACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGATGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | TTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGGAGCCATTTTCTTCATaGAGCAAACATGGCATAATT | + |
|
Preference number: 4 (lower is better) Translates to: LASDVSNVEVVEPPSLDWEPFSS*SKHGII Trigger: AATTATGCCATGTTTGCTGCATGAAGAAAATGGCTC...CCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | TGGGCAAAGGGCTGTGAAGCCATTGCATATCCCTTCCTTTGCACAGTCAGAATCTCTAGAAGTAAAAACTaGTCCTCATGTGAGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAKGCEAIAYPFLCTVRISRSKN*SSCETA Trigger: AGCAGTCTCACATGAGGACCAGTTTTTACTTCTAGA...GATTCTGACTGTGCAAAGGAAGGGATATGCAATGGCTTCACAGCCCTTTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGAACTGCTTGCTCCACTGCAAAGAGCCTGTACTGGCACAAGTTGATGGATTCTTCTCAAGCACTTaGCTTATGTTTCTAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNCLLHCKEPVLAQVDGFFSST*LMFLML Trigger: CAGCATTAGAAACATAAGCCAAGTGCTTGAGAAGAA...TCCATCAACTTGTGCCAGTACAGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | TCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCTCGCGTCACATTGTGAGTTTTAATGTATCTCTCTaGTGGCTCAATGTAAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SHCFSSGFGLAGSRHIVSFNVSL*WLNVKR Trigger: ACGTTTTACATTGAGCCAGCAGAGAGATACATTAAA...ACTCACAATGTGACGCGAGCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | CAGTACTGCCCACCAGTGAGCCACAATCCACTCAGCAATGTTTTCATAGAGTTGTTTGTCCCCAGATGTTaGTCTTGCATACATGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QYCPPVSHNPLSNVFIELFVPRC*SCIHDV Trigger: TACATCATGTATGCAAGAGCAACATCTGGGGACAAA...CAACTCTATGAAAACATTGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCATTCCTTATCATCTTTaGCATCAGAGCTGGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTIPYHL*HQSWHR Trigger: CCTGTGCCAGCTCTGATGGCAAAGATGATAAGGAAT...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTCTACTCCAGTCATTTaGTACTTCCTCATCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRTVQVYKERSHCFSSGSTPVI*YFLILS Trigger: TGAAAGGATGAGGAAGTACCAAATGACTGGAGTAGA...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCAAAAGCTGCATTAGCGTCGCATGTGTCCCATTTGATAACTCTCTCGTCTACTCCAGTCATTTaGTACTTCCTCATCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAKAALASHVSHLITLSSTPVI*YFLILS Trigger: TGAAAGGATGAGGAAGTACCAAATGACTGGAGTAGA...CGAGAGAGTTATCAAATGGGACACATGCGACGCTAATGCAGCTTTTGCCTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| CDS-3UTR CCA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCGTTCTTAGACTCTCCTaGAGTACACTCTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFQNCLHKALQNPGPLHTVLRLS*STLCSR Trigger: TCTGGAACAGAGTGTACTCCAGGAGAGTCTAAGAAC...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCTCAATGACTTCTTCTTaGCATCTGAATACAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVCTLASDVSNVEVVEPPSMTSS*HLNTTC Trigger: GCAAGTTGTATTCAGATGGCAAGAAGAAGTCATTGA...GGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| CDS-3UTR GCA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGCCCAGATGTTGCTCTTaGATACATGATGTAATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDHCTPPFSVILSMSIKQPRCCS*IHDVIA Trigger: GGCAATTACATCATGTATGCAAGAGCAACATCTGGG...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTCTTCTCAAGCACTTaGCTTATGTTTCTAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRTVQVYKERSHCFSSGFFSST*LMFLML Trigger: CAGCATTAGAAACATAAGCCAAGTGCTTGAGAAGAA...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| CDS-3UTR CCA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCTCTGAAGTCATTACATaGAGAGCCCGGCTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFRNANPLPTFAQSKNKGSEVIT*RARLQS Trigger: ACTCTGCAGCCGGGCTCTCCATGTAATGACTTCAGA...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| CDS-3UTR CCA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCCTTTGGATTACTACTTaGAGTGTGAACACTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVYKERSHCFSSGFGLAGLWITT*SVNTAN Trigger: ATTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAG...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| 3UTR CAA 72 bp | ACAAATAGAACCTGCACATTGCCCATTAATGCACACTaGTGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNRTCTLPINAH*CVPVTVCKVGL Trigger: AAGCCCAACTTTACAGACTGTAACAGGCACACACAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| CDS-3UTR TCA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCCTAATCTGCACCGCATaGAAACATCACAGTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFRNANPLPTFAQSKNKGLICTA*KHHSSL Trigger: GAGGCTACTGTGATGTTTTCATGCGGTGCAGATTAG...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| CDS-3UTR GCA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGTTTGTCCCCAGATGTTaGTCTTGCATACATGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: STKRADSEAKCCCCPVCKFVPRC*SCIHDV Trigger: TACATCATGTATGCAAGAGCAACATCTGGGGACAAA...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
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| CDS-3UTR GCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTAGCAGCAATCATCTTTaGACTGGTCACTGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTSSNHL*TGHCSH Trigger: GTGGCTACAGTGACCAGTGCAAAGATGATTGCTGCT...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
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| CDS-3UTR CCA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTAATGACAGAGTGAAATaGCAGGATTCGATCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPRTVQVYKERSHCFSSGNDRVK*QDSIFN Trigger: ATTAAAGATCGAATCCTGCCATTTCACTCTGTCATT...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGCTCCACACCAATATTTaGGAAACGGAAAGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDHCTPPFSVILSMSIKQLHTNI*ETERIC Trigger: ACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAG...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTGTTCTTAGACTCTCCTaGAGTACACTCTGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTVLRLS*STLCSR Trigger: TCTGGAACAGAGTGTACTCCAGGAGAGTCTAAGAAC...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR TCA 90 bp | GCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGCCCATTAATCTTCTTCTTGCCATCTaGATACAACTTGCTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLQVILFTNRTCTLPINLLLAI*IQLAFL Trigger: GAGAAAAGCAAGTTGTATTCAGATGGCAAGAAGAAG...ATTAATGGGCAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTGCACGCTGGTGTTTTTaGTGTAATGAATCCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTARWCF*CNESTL Trigger: CAATGTGGATTCATTACACCAAAAACACCAGCGTGC...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTCTCCACACCAATATTTaGGAAACGGAAAGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTLHTNI*ETERIC Trigger: ACAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAG...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTTCAATGACTTCTTCTTaGCATCTGAATACAACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILINPAINMIRAIPISSTSMTSS*HLNTTC Trigger: GCAAGTTGTATTCAGATGGCAAGAAGAAGTCATTGA...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CCA 90 bp | GCCATTTTCTTCATGCAGCAAACATGGCATAATTCCTTATCATCTTTGCCATCAAATGACAGAGTGAAATaGCAGGATTCGATCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: AIFFMQQTWHNSLSSLPSNDRVK*QDSIFN Trigger: ATTAAAGATCGAATCCTGCCATTTCACTCTGTCATT...TGATGGCAAAGATGATAAGGAATTATGCCATGTTTGCTGCATGAAGAAAATGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS GCA 90 bp | AGCAGGGTCCTTGACTCGGACTGCACTGCTTCCCAGGCTTCAGCTTaGATTTCTTCCCCTCTGGCTGGTTGGCATCGAAGCAGCAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVLDSDCTASQASA*ISSPLAGWHRSSNH Trigger: ATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGTCCGAGTCAAGGACCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS GCA 90 bp | CCTCAGGAGCTCAGGACCACTACTAGCAGCATGCTTCTCTGGATGTaGCCGGGCTCCTTCCTCTACTCCAGTCATTTGGTACTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQELRTTTSSMLLWM*PGSFLYSSHLVLPH Trigger: ATGAGGAAGTACCAAATGACTGGAGTAGAGGAAGGAGCCCGGGCACATCCAGAGAAGCATGCTGCTAGTAGTGGTCCTGAGCTCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 ENSMUST00000144537.2 |
||
| CDS CCA 90 bp | CGGACTGCACTGCTTCCCAGGCTTCAGCTTGCATTTCTTCCCCTCTaGCTGGTTGGCATCGAAGCAGCAATCATCTTTGCACTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RTALLPRLQLAFLPL*LVGIEAAIIFALVT Trigger: AGTGACCAGTGCAAAGATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS CCA 90 bp | ACTGCTTCCCAGGCTTCAGCTTGCATTTCTTCCCCTCTGGCTGGTTaGCATCGAAGCAGCAATCATCTTTGCACTGGTCACTGTAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TASQASACISSPLAG*HRSSNHLCTGHCSH Trigger: GTGGCTACAGTGACCAGTGCAAAGATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CCA 90 bp | TGTGCTGCACTGCTTCCCAGGCTTCAGCTTGCATTTCTTCCCCTCTaGCTGGTTGGCATCGAAGCAGCAATCATCTTTGCACTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: CAALLPRLQLAFLPL*LVGIEAAIIFALVT Trigger: AGTGACCAGTGCAAAGATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTTTCCCAGGCTTCAGCTaGCATTTCTTCCCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPNAVAVQFASHQLRSFPGFS*HFFPSG Trigger: GCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAA...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS TCA 90 bp | TCAGACTTTGACTTGAATGCACACTGTGCTGTACAGCAGGGTCCTTaGCTCGGACTGCACTGCTTCCCAGGCTTCAGCTTGCATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDFDLNAHCAVQQGP*LGLHCFPGFSLHFF Trigger: GAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGTCCGAGTCAAGGACCCTGCTGTACAGCACAGTGTGCATTCAAGTCAAAGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS TCA 90 bp | CCTTTGCACAGTCAGAATCATCCCGGCACTTTTCAGACTTTGACTTaGATGCACACTGTGCTGTACAGCAGGGTCCTTGACTCGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLHSQNHPGTFQTLT*MHTVLYSRVLDSDC Trigger: GCAGTCCGAGTCAAGGACCCTGCTGTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAAAAGTGCCGGGATGATTCTGACTGTGCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CAGTACTGCCCACCAGTGAGCCACAATCCACTCAGCAATGTTTTCATAGAGTTGTTCCCAGGCTTCAGCTaGCATTTCTTCCCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QYCPPVSHNPLSNVFIELFPGFS*HFFPSG Trigger: GCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAA...CAACTCTATGAAAACATTGCTGAGTGGATTGTGGCTCACTGGTGGGCAGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGTTCCCCTCTGGCTGGTaGGCATCGAAGCAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGALLQVILFTNRTCTLFPSGW*ASKQQS Trigger: TGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAA...CAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS TCA 90 bp | CAACCCAGGCCAGACCAAGAACACCATCATCAAAATCCCGGTCTGTaGAGACATAGGCCAGGCAGTAGTCATCATGATTCTGCTCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPRPDQEHHHQNPGL*RHRPGSSHHDSAQN Trigger: ATTCTGAGCAGAATCATGATGACTACTGCCTGGCCTATGTCTTCACAGACCGGGATTTTGATGATGGTGTTCTTGGTCTGGCCTGGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCTCTCCACACCAATATTaGGGAAACGGAAAGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: WQVMYPMLRWSSLPALIGSPHQY*GNGKDL Trigger: CAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGA...GCCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | GTCCCGCGTACTGTACAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTCTGTAAAGTTGGGCTaGGGATCAGATGCTGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VPRTVQVYKERSHCFSSGSVKLG*GSDAGQ Trigger: TTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGA...ACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTGTACAGTACGCGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | TGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGCCTCCCAGCCTTGATTGGCAATAGAACCTGCACATaGCCCATTAATGCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WQVMYPMLRWSSLPALIGNRTCT*PINAHL Trigger: CAAGTGTGCATTAATGGGCAATGTGCAGGTTCTATT...GCCAATCAAGGCTGGGAGGCTCGACCACCTCAACATTGGATACATCACTTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS CCA 90 bp | TCACACTCTTCCCCTTGTTCCACCATCCCGTTTCCACAGATAGGCTaGCCAGATTCAACAAAACAGTTGTTCCTCTTCTTCTCAAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SHSSPCSTIPFPQIG*PDSTKQLFLFFSST Trigger: AGTGCTTGAGAAGAAGAGGAACAACTGTTTTGTTGAATCTGGCCAGCCTATCTGTGGAAACGGGATGGTGGAACAAGGGGAAGAGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCAGCTGCGTTCTCTCTACTCCAGTCATTaGGTACTTCCTCATCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPNAVAVQFASHQLRSLYSSH*VLPHPF Trigger: GAAAGGATGAGGAAGTACCAAATGACTGGAGTAGAG...AGAACGCAGCTGATGGCTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCTCGCATGTGTCCCATTaGATAACTCTCTCGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFQNCLHKALQNPGPLHTSHVSH*ITLSGP Trigger: AGGCCCCGAGAGAGTTATCAAATGGGACACATGCGA...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTGGGCAAAGTCTCCACACCAATATTaGGGAAACGGAAAGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CVPVTVCKVGLGIRCWAKSPHQY*GNGKDL Trigger: CAAATCCTTTCCGTTTCCCAAATATTGGTGTGGAGA...CTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGGTGCCACCACGAGTCTaGATGAAACCTTCAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTGALLQVILFTNRTCTLVPPRV*MKPSNL Trigger: AAGATTTGAAGGTTTCATCAAGACTCGTGGTGGCAC...CAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGCCTGTTACAGTCTGTAAAGTTGGGCTTGGGATCAGATGCTGGGCAAAGTTGTTGTTGTTAAGTTaGTCCCCAGATGTTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVPVTVCKVGLGIRCWAKLLLLS*SPDVAL Trigger: AAGAGCAACATCTGGGGACAAACTTAACAACAACAA...CTTTGCCCAGCATCTGATCCCAAGCCCAACTTTACAGACTGTAACAGGCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCTTCCCCTCTGGCTGGTaGGCATCGAAGCAGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: HFRNANPLPTFAQSKNKGFPSGW*ASKQQS Trigger: TGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAA...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGCCCATTAATGCACACTaGTGTGTGCCTGTTACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDHCTPPFSVILSMSIKQPINAH*CVPVTV Trigger: GACTGTAACAGGCACACACAAGTGTGCATTAATGGG...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCCGACCACTGAACTGCTaGCTCCACTGCAAAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HFRNANPLPTFAQSKNKGRPLNC*LHCKEP Trigger: AGGCTCTTTGCAGTGGAGCAAGCAGTTCAGTGGTCG...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS CCA 90 bp | GACAGAGTGAAATGGCAGGATTCGATCTTTAATGTATCTCTCTGCTaGCTCAATGTAAAACGTGCCACCACGAGTCTTGATGAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DRVKWQDSIFNVSLC*LNVKRATTSLDETF Trigger: GAAGGTTTCATCAAGACTCGTGGTGGCACGTTTTACATTGAGCCAGCAGAGAGATACATTAAAGATCGAATCCTGCCATTTCACTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTAGAAATGCAAATCCACTTCCAACCTTTGCACAGTCCAAAAACAAAGGCTGTGAGACTGCTCGTTaGGCACGCTGGTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HFRNANPLPTFAQSKNKGCETAR*ARWCFW Trigger: CCAAAAACACCAGCGTGCCAAACGAGCAGTCTCACA...GCCTTTGTTTTTGGACTGTGCAAAGGTTGGAAGTGGATTTGCATTTCTAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | ATCTTGATAAATCCAGCCATTAACATGATCAGGGCAATTCCCATAAGCAGTACTTGTGAGACTGCTCGTTaGGCACGCTGGTGTTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILINPAINMIRAIPISSTCETAR*ARWCFW Trigger: CCAAAAACACCAGCGTGCCAAACGAGCAGTCTCACA...AGTACTGCTTATGGGAATTGCCCTGATCATGTTAATGGCTGGATTTATCAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGGTGCCACCACGAGTCTaGATGAAACCTTCAAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: STKRADSEAKCCCCPVCKVPPRV*MKPSNL Trigger: AAGATTTGAAGGTTTCATCAAGACTCGTGGTGGCAC...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | TATAACAAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGAGGGCTGTGAAGCCATaGCATATCCCTTCCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YNKVCTLASDVSNVEVVERAVKP*HIPSFA Trigger: TGCAAAGGAAGGGATATGCAATGGCTTCACAGCCCT...CTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTTGTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGTTACAGTCTGTAAAGTaGGGCTTGGGATCAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDHCTPPFSVILSMSIKQLQSVK*GLGSDA Trigger: AGCATCTGATCCCAAGCCCAACTTTACAGACTGTAA...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGAATTCCTTATCATCTTaGCCATCAGAGCTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LDHCTPPFSVILSMSIKQNSLSS*PSELAQ Trigger: CTGTGCCAGCTCTGATGGCAAAGATGATAAGGAATT...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CTGGACCACTGCACACCACCATTCTCTGTTATCCTGAGTATGTCAATTAAACAGCTGTACTGGCACAAGTaGATGGAGCCATTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDHCTPPFSVILSMSIKQLYWHK*MEPFSS Trigger: TGAAGAAAATGGCTCCATCAACTTGTGCCAGTACAG...CTGTTTAATTGACATACTCAGGATAACAGAGAATGGTGGTGTGCAGTGGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTACAAGGAGAGATCCCATTGTTTCTCTAGCGGTTTTGGCCTTGCTGGCACTTTGGATTACTACTaGGAGTGTGAACACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVYKERSHCFSSGFGLAGTLDYY*ECEHCK Trigger: TTTGCAGTGTTCACACTCCAAGTAGTAATCCAAAGT...GCCAGCAAGGCCAAAACCGCTAGAGAAACAATGGGATCTCTCCTTGTAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS GCA 90 bp | AATGACAGAGTGAAATGGCAGGATTCGATCTTTAATGTATCTCTCTaGTGGCTCAATGTAAAACGTGCCACCACGAGTCTTGATGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: NDRVKWQDSIFNVSL*WLNVKRATTSLDET Trigger: GGTTTCATCAAGACTCGTGGTGGCACGTTTTACATTGAGCCAGCAGAGAGATACATTAAAGATCGAATCCTGCCATTTCACTCTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGGTGCACTCCTCCAAGTCATACTTTTCACAAATAGAACCTGCACATTGCCATCTGAATACAACTaGCTTTTCTCACATATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGALLQVILFTNRTCTLPSEYN*LFSHIP Trigger: GGGAATATGTGAGAAAAGCAAGTTGTATTCAGATGG...CAATGTGCAGGTTCTATTTGTGAAAAGTATGACTTGGAGGAGTGCACCTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAAAAAGAGCTGACTCTGAAGCCAAATGCTGTTGCTGTCCAGTTTGCAAGCCATCTGAATACAACTaGCTTTTCTCACATATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: STKRADSEAKCCCCPVCKPSEYN*LFSHIP Trigger: GGGAATATGTGAGAAAAGCAAGTTGTATTCAGATGG...CTTGCAAACTGGACAGCAACAGCATTTGGCTTCAGAGTCAGCTCTTTTTGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS-3UTR CAA 90 bp | TCATTTCAAAACTGCCTGCATAAAGCATTACAGAATCCTGGACCACTGCACACCTTGTTGTTGTTAAGTTaGTCCCCAGATGTTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFQNCLHKALQNPGPLHTLLLLS*SPDVAL Trigger: AAGAGCAACATCTGGGGACAAACTTAACAACAACAA...GGTGTGCAGTGGTCCAGGATTCTGTAATGCTTTATGCAGGCAGTTTTGAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS CCA 90 bp | GGAAATCTAGAAGTAAAAACTGGTCCTCATGTGAGACTGCTCGTTTaGCACGCTGGTGTTTTTGGTGTAATGAATCCACATTGTAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: GNLEVKTGPHVRLLV*HAGVFGVMNPHCKI Trigger: TATCTTACAATGTGGATTCATTACACCAAAAACACCAGCGTGCCAAACGAGCAGTCTCACATGAGGACCAGTTTTTACTTCTAGATTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS-3UTR CAA 90 bp | TATAACAAGGTATGTACATTGGCAAGTGATGTATCCAATGTTGAGGTGGTCGAGTTTTCAGACTTTGACTaGAATGCACACTGTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: YNKVCTLASDVSNVEVVEFSDFD*NAHCAV Trigger: TACAGCACAGTGTGCATTCAAGTCAAAGTCTGAAAA...CTCGACCACCTCAACATTGGATACATCACTTGCCAATGTACATACCTTGTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS GCA 72 bp | TGCACACTGTGCTGCACTGCTTCCCAGGCTTCAGCTTaGATTTCTTCCCCTCTGGCTGGTTGGCATCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: CTLCCTASQASA*ISSPLAGWHRS Trigger: GCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGCACAGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140205.8 |
||
| CDS CCA 72 bp | CAGGAGCTCAGGACCACTACTAGCAGCATGCTTCTCTaGATGTGCCCGGGCTCCTTCCTCTACTCCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QELRTTTSSMLL*MCPGSFLYSSH Trigger: ATGACTGGAGTAGAGGAAGGAGCCCGGGCACATCCAGAGAAGCATGCTGCTAGTAGTGGTCCTGAGCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 ENSMUST00000144537.2 |
||
| CDS TCA 72 bp | GACTTGAATGCACACTGTGCTGTACAGCAGGGTCCTTaGCTCGGACTGCACTGCTTCCCAGGCTTCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DLNAHCAVQQGP*LGLHCFPGFSL Trigger: CAAGCTGAAGCCTGGGAAGCAGTGCAGTCCGAGTCAAGGACCCTGCTGTACAGCACAGTGTGCATTCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS GCA 72 bp | CACACTGTGCTGTACAGCAGGGTCCTTGACTCGGACTaGACTGCTTCCCAGGCTTCAGCTTGCATTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HTVLYSRVLDSD*TASQASACISS Trigger: GGAAGAAATGCAAGCTGAAGCCTGGGAAGCAGTGCAGTCCGAGTCAAGGACCCTGCTGTACAGCACAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS GCA 72 bp | CTCAGGACCACTACTAGCAGCATGCTTCTCTGGATGTaGCCGGGCTCCTTCCTCTACTCCAGTCATTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LRTTTSSMLLWM*PGSFLYSSHLV Trigger: TACCAAATGACTGGAGTAGAGGAAGGAGCCCGGGCACATCCAGAGAAGCATGCTGCTAGTAGTGGTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 ENSMUST00000144537.2 |
||
| CDS CCA 72 bp | TTCCCAGGCTTCAGCTTGCATTTCTTCCCCTCTGGCTaGTTGGCATCGAAGCAGCAATCATCTTTGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPGFSLHFFPSG*LASKQQSSLHW Trigger: CCAGTGCAAAGATGATTGCTGCTTCGATGCCAACCAGCCAGAGGGGAAGAAATGCAAGCTGAAGCCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS TCA 72 bp | AGTCAGAATCATCCCGGCACTTTTCAGACTTTGACTTaGATGCACACTGTGCTGTACAGCAGGGTCCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SQNHPGTFQTLT*MHTVLYSRVLD Trigger: GTCAAGGACCCTGCTGTACAGCACAGTGTGCATTCAAGTCAAAGTCTGAAAAGTGCCGGGATGATTCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067880.13 |
||
| CDS CCA 72 bp | TCCCCTTGTTCCACCATCCCGTTTCCACAGATAGGCTaGCCAGATTCAACAAAACAGTTGTTCCTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPCSTIPFPQIG*PDSTKQLFLFF Trigger: GAAGAAGAGGAACAACTGTTTTGTTGAATCTGGCCAGCCTATCTGTGGAAACGGGATGGTGGAACAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS TCA 72 bp | CCAGACCAAGAACACCATCATCAAAATCCCGGTCTGTaGAGACATAGGCCAGGCAGTAGTCATCATGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PDQEHHHQNPGL*RHRPGSSHHDS Trigger: AGAATCATGATGACTACTGCCTGGCCTATGTCTTCACAGACCGGGATTTTGATGATGGTGTTCTTGGTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CAA 90 bp | ATGATGCCTGTGTTCAATGACTTCTTCTTGCCATCTGAATACAACTaGCTTTTCTCACATATTCCCCCAGAGCTTCCTGAAGGTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MMPVFNDFFLPSEYN*LFSHIPPELPEGAP Trigger: TGGAGCACCTTCAGGAAGCTCTGGGGGAATATGTGAGAAAAGCAAGTTGTATTCAGATGGCAAGAAGAAGTCATTGAACACAGGCATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS GCA 72 bp | GTGAAATGGCAGGATTCGATCTTTAATGTATCTCTCTaGTGGCTCAATGTAAAACGTGCCACCACGAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VKWQDSIFNVSL*WLNVKRATTSL Trigger: AAGACTCGTGGTGGCACGTTTTACATTGAGCCAGCAGAGAGATACATTAAAGATCGAATCCTGCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CCA 72 bp | GAAGTAAAAACTGGTCCTCATGTGAGACTGCTCGTTTaGCACGCTGGTGTTTTTGGTGTAATGAATCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: EVKTGPHVRLLV*HAGVFGVMNPH Trigger: ATGTGGATTCATTACACCAAAAACACCAGCGTGCCAAACGAGCAGTCTCACATGAGGACCAGTTTTTACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CAA 72 bp | AGAAGTAAAAACTGGTCCTCATGTGAGACTGCTCGTTaGGCACGCTGGTGTTTTTGGTGTAATGAATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSKNWSSCETAR*ARWCFWCNEST Trigger: TGTGGATTCATTACACCAAAAACACCAGCGTGCCAAACGAGCAGTCTCACATGAGGACCAGTTTTTACTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CCA 72 bp | AAATGGCAGGATTCGATCTTTAATGTATCTCTCTGCTaGCTCAATGTAAAACGTGCCACCACGAGTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KWQDSIFNVSLC*LNVKRATTSLD Trigger: ATCAAGACTCGTGGTGGCACGTTTTACATTGAGCCAGCAGAGAGATACATTAAAGATCGAATCCTGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CAA 72 bp | GTGTTCAATGACTTCTTCTTGCCATCTGAATACAACTaGCTTTTCTCACATATTCCCCCAGAGCTTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VFNDFFLPSEYN*LFSHIPPELPE Trigger: TTCAGGAAGCTCTGGGGGAATATGTGAGAAAAGCAAGTTGTATTCAGATGGCAAGAAGAAGTCATTGAACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||
| CDS CAA 72 bp | CTTATGTTTCTAATGCTGCAGAGTGAAAATTTGTTGTaGTTAAGTTTGTCCCCAGATGTTGCTCTTGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: LMFLMLQSENLL*LSLSPDVALAY Trigger: GTATGCAAGAGCAACATCTGGGGACAAACTTAACAACAACAAATTTTCACTCTGCAGCATTAGAAACATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067880.13 ENSMUST00000140205.8 |
||