Pregenerated sensors for ADAL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027259Ensembl transcript IDs: ENSMUST00000028702.10, ENSMUST00000066155.6, ENSMUST00000110662.9, ENSMUST00000110665.8, ENSMUST00000119031.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTGTTGCCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTaGTTTCCACCCAGAACCATGTCCCTAAGGGTGGTATCACCCTCT | + |
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Preference number: 1 (lower is better) Translates to: ECCLWLAPRALFHFL*FPPRTMSLRVVSPS Trigger: AGAGGGTGATACCACCCTTAGGGACATGGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGGCAACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR TCA 90 bp | AGGAGAAGGGCAAAGCCAGATTCTAGCTTTGTTACTACAGTCACCTaGCAACTAGGCACCCACACAAACAGTTCAGGTGTGCACTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RRRAKPDSSFVTTVT*QLGTHTNSSGVHCD Trigger: GTCACAGTGCACACCTGAACTGTTTGTGTGGGTGCCTAGTTGTCAGGTGACTGTAGTAACAAAGCTAGAATCTGGCTTTGCCCTTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR CAA 90 bp | GGAGTGTTGCCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTaGCTTTCCACCCAGAACCATGTCCCTAAGGGTGGTATCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: GVLPMACSSCLVPFP*LSTQNHVPKGGITL Trigger: GAGGGTGATACCACCCTTAGGGACATGGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGGCAACACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCAAAGCAGCATGGAAGTaGAGCCATGCAAAACCTCGA | + |
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Preference number: 2 (lower is better) Translates to: GKLRQELKLKPWRSVAYGKAAWK*SHAKPR Trigger: TCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTT...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCCAGCAAAAGCAGCATaGAAGTGCAGCCATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GKLRQELKLKPWRSVAYGPAKAA*KCSHAK Trigger: TTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCAAACAGAGATTTCCCTaGAGACAAAGAGTTTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: GKLRQELKLKPWRSVAYGKQRFP*RQRVST Trigger: AGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTT...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTGACCCCATATATACTTaGCTACCCAAATTCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LQQKQHGSAAMQNLELTSDPIYT*LPKFKG Trigger: TCCCTTGAATTTGGGTAGCCAAGTATATATGGGGTC...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCAAAGCAGCATGGAAGTaGAGCCATGCAAAACCTCGA | + |
|
Preference number: 2 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVKAAWK*SHAKPR Trigger: TCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTT...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGAAAGCAGCATGGAAGTaGAGCCATGCAAAACCTCGA | + |
|
Preference number: 2 (lower is better) Translates to: KTEISLKTKSFNFSEGSRKAAWK*SHAKPR Trigger: TCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTT...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTGAAGTGGAAGGAGTCTaGTTAAACCTAACAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: SCGNIFSVEGPSSQMTLAEVEGV*LNLTKQ Trigger: CTGTTTTGTTAGGTTTAATCAGACTCCTTCCACTTC...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTTTTCTTTTCTTAAACTaGAGGGATTACTCCAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: SCGNIFSVEGPSSQMTLAFLFLN*RDYSNP Trigger: GGGGTTGGAGTAATCCCTTCAGTTTAAGAAAAGAAA...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGGACCCCATATATACTTaGCTACCCAAATTCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KTEISLKTKSFNFSEGSRDPIYT*LPKFKG Trigger: TCCCTTGAATTTGGGTAGCCAAGTATATATGGGGTC...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACCCAGCAAAAGCAGCATaGAAGTGCAGCCATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KLILERVKGSGRSLIKPNPAKAA*KCSHAK Trigger: TTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGG...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR CCA 72 bp | CCTGGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATaGAGGAGTGTTGCCTATGGCTTGCTCCTCGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGKLRQELKLKP*RSVAYGLLLVP Trigger: AGGCACGAGGAGCAAGCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR GCA 72 bp | AGCCATGGAGGAGTGTTGCCTATGGCTTGCTCCTCGTaGCTTGTTCCATTTCCTTTGCTTTCCACCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHGGVLPMACSS*LVPFPLLSTQN Trigger: GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGGCAACACTCCTCCATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR GCA 72 bp | CTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTaGTTTCCACCCAGAACCATGTCCCTAAGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LWLAPRALFHFL*FPPRTMSLRVV Trigger: TACCACCCTTAGGGACATGGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR GCA 72 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTaGAGCCATGCAAAACCTCGAACTTACCAGTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLNNPPAKAAWK*SHAKPRTYQLK Trigger: CTTCAACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACAGCCAGATTCTAGCTTaGTTACTACAGTCACCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PMACSSCLVPFPLLSTQNSQILA*LLQSPD Trigger: GTCAGGTGACTGTAGTAACAAAGCTAGAATCTGGCT...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCAACCAACCAAGACATTaGTTATCTGCTAAAGTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: GKLRQELKLKPWRSVAYGNQPRH*LSAKVG Trigger: GCCGACTTTAGCAGATAACAAATGTCTTGGTTGGTT...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACGGAATATTTTCTCAGTaGAGGGTCCCTCTTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PMACSSCLVPFPLLSTQNGIFSQ*RVPLPK Trigger: TTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCC...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACAACCAACCAAGACATTaGTTATCTGCTAAAGTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: PMACSSCLVPFPLLSTQNNQPRH*LSAKVG Trigger: GCCGACTTTAGCAGATAACAAATGTCTTGGTTGGTT...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACCTGATTGGGCCAATCTaGTGGGAATATTTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PMACSSCLVPFPLLSTQNLIGPI*WEYFLS Trigger: ACTGAGAAAATATTCCCACAAGATTGGCCCAATCAG...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR CCA 72 bp | CAGTTGAAGGGGCTGGAGTTAGACCCCATATATACTTaGCTACCCAAATTCAAGGGAAGTCATTTCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QLKGLELDPIYT*LPKFKGSHFKW Trigger: CCACTTGAAATGACTTCCCTTGAATTTGGGTAGCCAAGTATATATGGGGTCTAACTCCAGCCCCTTCAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| 3UTR CCA 72 bp | GGGTTATTTCCTCTTATAATTTGTAGTCTGTCATCCTaGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATG | + |
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Preference number: 3 (lower is better) Translates to: GLFPLIICSLSS*EVEAGTKAEAM Trigger: CATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCCAGGATGACAGACTACAAATTATAAGAGGAAATAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCTTGGTCCAGGGCCCCTaGCTCAGAGGCGCTAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLVQGP*LRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAA...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACTTGGTCCAGGGCCCCTaGCTCAGAGGCGCTAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PMACSSCLVPFPLLSTQNLVQGP*LRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAA...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTTTGGTCCAGGGCCCCTaGCTCAGAGGCGCTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQQKQHGSAAMQNLELTSLVQGP*LRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAA...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCAGCAGAAGAGGGCCTaGCCTGCACATGTAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPQQKRA*PAHVEL Trigger: GAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| 3UTR CAA 72 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTaGCTTTCCACCCAGAACCATGTCCCTAAGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PMACSSCLVPFP*LSTQNHVPKGG Trigger: ACCACCCTTAGGGACATGGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCTAAGGAATGTCCCATaGCCAATTCTGTCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLRNVP*PILSGS Trigger: GCTCCCTGACAGAATTGGGCATGGGACATTCCTTAG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACTTTCTTCTCTGGGAGTaGTCCTCAGCTCCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: PMACSSCLVPFPLLSTQNFLLWE*SSAPGT Trigger: AGTACCTGGAGCTGAGGAGCACTCCCAGAGAAGAAA...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCTCGGCAAGATGCAATaGCAACTTCAGACCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLGKMQ*QLQTCF Trigger: AAAGCAGGTCTGAAGTTGGCATTGCATCTTGCCGAG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCTAAGGAATGTCCCATaGCCAATTCTGTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPLRNVP*PILSGS Trigger: GCTCCCTGACAGAATTGGGCATGGGACATTCCTTAG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACCTAAGGAATGTCCCATaGCCAATTCTGTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PMACSSCLVPFPLLSTQNLRNVP*PILSGS Trigger: GCTCCCTGACAGAATTGGGCATGGGACATTCCTTAG...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTTTGGTCCAGGGCCCCTaGCTCAGAGGCGCTAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLALVQGP*LRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAA...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCGTAGAGCTCTGCATTTaGTTCCAACACGAGGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGVELCI*FQHEGY Trigger: ATACCCCTCGTGTTGGAAGCAAATGCAGAGCTCTAC...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| 3UTR CAA 72 bp | ATGGAGGAGTGTTGCCTATGGCTTGCTCCTCGTGCCTaGTTCCATTTCCTTTGCTTTCCACCCAGAACCATG | + |
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Preference number: 4 (lower is better) Translates to: MEECCLWLAPRA*FHFLCFPPRTM Trigger: CATGGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGGCAACACTCCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR GCA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACGCACATGTAGAGCTCTaGATTTGCTTCCAACACGAG | + |
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Preference number: 4 (lower is better) Translates to: PMACSSCLVPFPLLSTQNAHVEL*ICFQHE Trigger: CTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGC...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCCATTCAAGTGGGCATaGAGCTCCACTTTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGPFKWA*SSTFGN Trigger: ATTACCAAAAGTGGAGCTCCATGCCCACTTGAATGG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| 3UTR CAA 72 bp | CTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCTaGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LKLKPWRSVAYG*LLVPCSISFAF Trigger: GAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS-3UTR TCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCTGGCTTTTGATGTTTaGGGTCAAACAAAGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLAFDV*GQTKFE Trigger: CTCGAACTTTGTTTGACCTCAAACATCAAAAGCCAG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTGAAGAGGGCCTGCCCTaGACATGTAGAGCTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLAEEGLP*TCRALH Trigger: ATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTC...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTATGGAGCCATTCAAGTaGGCATGGAGCTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQQKQHGSAAMQNLELTSMEPFK*AWSSTF Trigger: AAAAGTGGAGCTCCATGCCCACTTGAATGGCTCCAT...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTTCCCCTTGTCAATCATaGTCATGTGACCATGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPSPCQS*SCDHER Trigger: ACGTTCATGGTCACATGACCATGATTGACAAGGGGA...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACTCCCCTTGTCAATCATaGTCATGTGACCATGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PMACSSCLVPFPLLSTQNSPCQS*SCDHER Trigger: ACGTTCATGGTCACATGACCATGATTGACAAGGGGA...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCTCATTACTTGTGATGTaGACTTGTTCTGAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGSLLVM*TCSEWG Trigger: TCCCCACTCAGAACAAGTCCACATCACAAGTAATGA...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTTCAGCTCCAGGTACTTaGCACCATCATCTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LQQKQHGSAAMQNLELTSSAPGT*HHHLQI Trigger: AATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGA...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTGGACTGTCTGGCTTTTaGTGTTTGAGGTCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPGLSGF*CLRSNK Trigger: TTTGTTTGACCTCAAACATCAAAAGCCAGACAGTCC...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTGACAGATCCCACACCTaGAATGGGGTCAAATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPDRSHT*NGVKLN Trigger: ATTTAATTTGACCCCATTTCAGGTGTGGGATCTGTC...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTACTTTCTGCTTCAAGTaGGTCCACCTTTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPTFCFK*VHLFLS Trigger: ACTGAGAAAAAGGTGGACTCACTTGAAGCAGAAAGT...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCTGGCTTTTGATGTTTaGGGTCAAACAAAGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPLAFDV*GQTKFP Trigger: TGGGAACTTTGTTTGACCTCAAACATCAAAAGCCAG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCTTGACACCATCATCTaGAAATTCCTTAATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLDTII*KFLNDV Trigger: GACGTCATTAAGGAATTTGCAGATGATGGTGTCAAG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCAATGTTCATTACTTGTaGTGTGGACTTGTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKLRQELKLKPWRSVAYGNVHYL*CGLVLS Trigger: ACTCAGAACAAGTCCACATCACAAGTAATGAACATT...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCTTGACACCATCATCTaGAAATTCCTTAATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPLDTII*KFLNDV Trigger: GACGTCATTAAGGAATTTGCAGATGATGGTGTCAAG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTGTTTGCATTGTTTTATaGCTTCAAGGACGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPVCIVL*LQGRIP Trigger: TGGAATCCGTCCTTGAAGGCATAAAACAATGCAAAC...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTCTAAGGAATGTCCCATaGCCAATTCTGTCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLALRNVP*PILSGS Trigger: GCTCCCTGACAGAATTGGGCATGGGACATTCCTTAG...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTTTCTTTTTCCCTGTTTaGAATCTCGGCAAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPFFFPV*NLGKMQ Trigger: TTGCATCTTGCCGAGATTCCAAACAGGGAAAAAGAA...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCTTTCTTCTCTGGGAGTaGTCCTCAGCTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVFLLWE*SSAPGT Trigger: AGTACCTGGAGCTGAGGAGCACTCCCAGAGAAGAAA...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTTTCTCAGTTCAGATCTaGTGTTGTCACAAGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQQKQHGSAAMQNLELTSFSVQI*CCHKQR Trigger: TCTTTGCTTGTGACAACACCAGATCTGAACTGAGAA...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTACCTCTTCTGTCAATTaGCATCAAATACCTAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LQQKQHGSAAMQNLELTSTSSVN*HQIPNI Trigger: GATGTTAGGTATTTGATGGCAATTGACAGAAGAGGT...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCCTCGGCAAGATGCAATaGCAACTTCAGACCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVLGKMQ*QLQTCF Trigger: AAAGCAGGTCTGAAGTTGGCATTGCATCTTGCCGAG...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTGACAGATCCCACACCTaGAATGGGGTCAAATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLADRSHT*NGVKLN Trigger: ATTTAATTTGACCCCATTTCAGGTGTGGGATCTGTC...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTACTTTCTGCTTCAAGTaGGTCCACCTTTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLATFCFK*VHLFLS Trigger: ACTGAGAAAAAGGTGGACTCACTTGAAGCAGAAAGT...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGCTCGGCAAGATGCAATaGCAACTTCAGACCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTEISLKTKSFNFSEGSRLGKMQ*QLQTCF Trigger: AAAGCAGGTCTGAAGTTGGCATTGCATCTTGCCGAG...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCCCATTCAAGTGGGCATaGAGCTCCACTTTTGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVPFKWA*SSTFGN Trigger: ATTACCAAAAGTGGAGCTCCATGCCCACTTGAATGG...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCAGCTCCAGGTACTTaGCACCATCATCTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KTEISLKTKSFNFSEGSRSAPGT*HHHLQI Trigger: AATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGA...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCGACAGATCCCACACCTaGAATGGGGTCAAATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVDRSHT*NGVKLN Trigger: ATTTAATTTGACCCCATTTCAGGTGTGGGATCTGTC...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCACTTTCTGCTTCAAGTaGGTCCACCTTTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVTFCFK*VHLFLS Trigger: ACTGAGAAAAAGGTGGACTCACTTGAAGCAGAAAGT...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTTTCTCAGTTCAGATCTaGTGTTGTCACAAGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCGNIFSVEGPSSQMTLAFSVQI*CCHKQR Trigger: TCTTTGCTTGTGACAACACCAGATCTGAACTGAGAA...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGCTGGCTTTTGATGTTTaGGGTCAAACAAAGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTEISLKTKSFNFSEGSRLAFDV*GQTKFE Trigger: CTCGAACTTTGTTTGACCTCAAACATCAAAAGCCAG...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCACCTCTTCTGTCAATTaGCATCAAATACCTAACATC | + |
|
Preference number: 4 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVTSSVN*HQIPNI Trigger: GATGTTAGGTATTTGATGGCAATTGACAGAAGAGGT...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTTCTTTTTCCCTGTTTaGAATCTCGGCAAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTEISLKTKSFNFSEGSRFFFPV*NLGKMQ Trigger: TTGCATCTTGCCGAGATTCCAAACAGGGAAAAAGAA...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACATGGAGCCATTCAAGTaGGCATGGAGCTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNMEPFK*AWSSTF Trigger: AAAAGTGGAGCTCCATGCCCACTTGAATGGCTCCAT...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACTCAGCTCCAGGTACTTaGCACCATCATCTGCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNSAPGT*HHHLQI Trigger: AATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGA...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACGGACTGTCTGGCTTTTaGTGTTTGAGGTCAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNGLSGF*CLRSNK Trigger: TTTGTTTGACCTCAAACATCAAAAGCCAGACAGTCC...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACGACAGATCCCACACCTaGAATGGGGTCAAATTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNDRSHT*NGVKLN Trigger: ATTTAATTTGACCCCATTTCAGGTGTGGGATCTGTC...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACACTTTCTGCTTCAAGTaGGTCCACCTTTTTCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNTFCFK*VHLFLS Trigger: ACTGAGAAAAAGGTGGACTCACTTGAAGCAGAAAGT...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACCTTGACACCATCATCTaGAAATTCCTTAATGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNLDTII*KFLNDV Trigger: GACGTCATTAAGGAATTTGCAGATGATGGTGTCAAG...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACGTTTGCATTGTTTTATaGCTTCAAGGACGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNVCIVL*LQGRIP Trigger: TGGAATCCGTCCTTGAAGGCATAAAACAATGCAAAC...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACTTCTCAGTTCAGATCTaGTGTTGTCACAAGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNFSVQI*CCHKQR Trigger: TCTTTGCTTGTGACAACACCAGATCTGAACTGAGAA...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACACCTCTTCTGTCAATTaGCATCAAATACCTAACATC | + |
|
Preference number: 4 (lower is better) Translates to: KLILERVKGSGRSLIKPNTSSVN*HQIPNI Trigger: GATGTTAGGTATTTGATGGCAATTGACAGAAGAGGT...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS CCA 90 bp | GCTTCCAACACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTTaGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAATGTCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ASNTRGIWCCLTKST*SRAPASEALRNVPC Trigger: GCATGGGACATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGTGTTGGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS GCA 90 bp | GGGTATCTGGTGTTGCCTCACGAAGTCCACTTGGTCCAGGGCCCCTaGCTCAGAGGCGCTAAGGAATGTCCCATGCCCAATTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GYLVLPHEVHLVQGP*LRGAKECPMPNSVR Trigger: CCTGACAGAATTGGGCATGGGACATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS GCA 90 bp | CCTCAGCAGAAGAGGGCCTGCCCTGCACATGTAGAGCTCTGCATTTaGTTCCAACACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQQKRACPAHVELCI*FQHEGYLVLPHEVH Trigger: GTGGACTTCGTGAGGCAACACCAGATACCCCTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS GCA 90 bp | TGTGGACTTGTTCTGAGTGGGGATGTGCCTCAGCAGAAGAGGGCCTaGCCTGCACATGTAGAGCTCTGCATTTGCTTCCAACACGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CGLVLSGDVPQQKRA*PAHVELCICFQHEG Trigger: CCCCTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS CCA 90 bp | AAACAAAGTTCGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTTaGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAATGTCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: KQSSRGIWCCLTKST*SRAPASEALRNVPC Trigger: GCATGGGACATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGAACTTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000119031.8 |
||
| CDS GCA 90 bp | ACTTGTTCTGAGTGGGGATGTGCCTCAGCAGAAGAGGGCCTGCCCTaGACATGTAGAGCTCTGCATTTGCTTCCAACACGAGGGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: TCSEWGCASAEEGLP*TCRALHLLPTRGVS Trigger: AGATACCCCTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCAGTCTCCCTGGCTATaGTTGGGCCACCTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPQSPWL*LGHLFC Trigger: ACAGAAGAGGTGGCCCAACAATAGCCAGGGAGACTG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTCAGTCTCCCTGGCTATaGTTGGGCCACCTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQQKQHGSAAMQNLELTSQSPWL*LGHLFC Trigger: ACAGAAGAGGTGGCCCAACAATAGCCAGGGAGACTG...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCTCAGCTCCAGGTACTaGACACCATCATCTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GKLRQELKLKPWRSVAYGLSSRY*TPSSAN Trigger: ATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS TCA 90 bp | CAAAGTTCCCACAAAATGTTCATTACTTGTGATGTGGACTTGTTCTaGGTGGGGATGTGCCTCAGCAGAAGAGGGCCTGCCCTGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: QSSHKMFITCDVDLF*VGMCLSRRGPALHM Trigger: CATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACATCACAAGTAATGAACATTTTGTGGGAACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS CCA 90 bp | GTTCCCACAAAATGTTCATTACTTGTGATGTGGACTTGTTCTGAGTaGGGATGTGCCTCAGCAGAAGAGGGCCTGCCCTGCACATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VPTKCSLLVMWTCSE*GCASAEEGLPCTCR Trigger: TCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACATCACAAGTAATGAACATTTTGTGGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTCTCAGCTCCAGGTACTaGACACCATCATCTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQQKQHGSAAMQNLELTSLSSRY*TPSSAN Trigger: ATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAG...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACCAAGAAGTCGTTAGCTaGTCCTATAGTTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PMACSSCLVPFPLLSTQNQEVVS*SYSWIS Trigger: GGAGATCCAACTATAGGACAAGCTAACGACTTCTTG...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCAAGAAGTCGTTAGCTaGTCCTATAGTTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPQEVVS*SYSWIS Trigger: GGAGATCCAACTATAGGACAAGCTAACGACTTCTTG...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTGGGACTGTCTGGCTTTaGATGTTTGAGGTCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPGTVWL*MFEVKQ Trigger: TTGTTTGACCTCAAACATCAAAAGCCAGACAGTCCC...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS GCA 90 bp | TTCTCTGGGAGTGCTCCTCAGCTCCAGGTACTTGACACCATCATCTaGAAATTCCTTAATGACGTCTTTTGTGACCATCAGGATGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSGSAPQLQVLDTII*KFLNDVFCDHQDVL Trigger: GAGGACATCCTGATGGTCACAAAAGACGTCATTAAGGAATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACTCCCAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTAAACAACCCTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTTTTCTTTTTCCCTGTTaGGAATCTCGGCAAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLNNPPAKAAWKCSHAKPFLFPC*ESRQDA Trigger: TGCATCTTGCCGAGATTCCAAACAGGGAAAAAGAAA...AGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAGGGTTGTTTAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCTGCCAGTTGATATTCTaGAGAAAGGTATGTCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKLRQELKLKPWRSVAYGCQLIF*RKVCRK Trigger: TTTGCGACATACCTTTCTCAAGAATATCAACTGGCA...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGTTGAGGCAGGAACTAAAGCTGAAGCCATGGAGGAGTGTTGCCTATGGCCATGGAGCTCCACTTTaGGTAATTGCAGATAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKLRQELKLKPWRSVAYGHGAPL*VIADKS Trigger: ACTTTTATCTGCAATTACCAAAAGTGGAGCTCCATG...GCCATAGGCAACACTCCTCCATGGCTTCAGCTTTAGTTCCTGCCTCAACTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTTTTCTTTTTCCCTGTTaGGAATCTCGGCAAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LQQKQHGSAAMQNLELTSFLFPC*ESRQDA Trigger: TGCATCTTGCCGAGATTCCAAACAGGGAAAAAGAAA...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACTGCCAGTTGATATTCTaGAGAAAGGTATGTCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PMACSSCLVPFPLLSTQNCQLIF*RKVCRK Trigger: TTTGCGACATACCTTTCTCAAGAATATCAACTGGCA...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGGCTTGCTCCTCGTGCCTTGTTCCATTTCCTTTGCTTTCCACCCAGAACCATGGAGCTCCACTTTaGGTAATTGCAGATAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PMACSSCLVPFPLLSTQNHGAPL*VIADKS Trigger: ACTTTTATCTGCAATTACCAAAAGTGGAGCTCCATG...GTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCAAAAGCAGCATGGAAGTGCAGCCATGCAAAACCTCGAACTTACCAGTTGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LQQKQHGSAAMQNLELTSCFCCQ*IFLRKV Trigger: TACCTTTCTCAAGAATATCAACTGGCAGCAGAAACA...ACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCCATGCTGCTTTTGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS CCA 90 bp | GAGGAAGAACTCTTTAGCAAGTTCGACAGTCTCCCTGGCTATTGTTaGGCCACCTCTTCTGTCAATTGCCATCAAATACCTAACATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EEELFSKFDSLPGYC*ATSSVNCHQIPNIN Trigger: ATTGATGTTAGGTATTTGATGGCAATTGACAGAAGAGGTGGCCCAACAATAGCCAGGGAGACTGTCGAACTTGCTAAAGAGTTCTTCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS CCA 90 bp | CTTCCCCTTGTCAATCATGGTCATGTGACCATGAACGTTAAGATGTaGCTTCTTGGCTATCAGTTTCTTCATGGTACTGGAACTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPLVNHGHVTMNVKM*LLGYQFLHGTGTNG Trigger: TCCATTAGTTCCAGTACCATGAAGAAACTGATAGCCAAGAAGCCACATCTTAACGTTCATGGTCACATGACCATGATTGACAAGGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGCTCAGCTCCAGGTACTaGACACCATCATCTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KTEISLKTKSFNFSEGSRLSSRY*TPSSAN Trigger: ATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAG...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS-3UTR CAA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGGGGACTGTCTGGCTTTaGATGTTTGAGGTCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: KTEISLKTKSFNFSEGSRGTVWL*MFEVKQ Trigger: TTGTTTGACCTCAAACATCAAAAGCCAGACAGTCCC...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTGGGAATATTTTCTCAGTTGAGGGTCCCTCTTCCCAAATGACTCTAGCTTGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCGNIFSVEGPSSQMTLACFCCQ*IFLRKV Trigger: TACCTTTCTCAAGAATATCAACTGGCAGCAGAAACA...AGCTAGAGTCATTTGGGAAGAGGGACCCTCAACTGAGAAAATATTCCCACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS TCA 90 bp | TTTTTCTCAGTTCAGATCTGGTGTTGTCACAAGCAAAGATGTAGTTaGTGGATTCATAGGACAGATCCCACACCTGAAATGGGGTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FFSVQIWCCHKQRCS*WIHRTDPTPEMGSN Trigger: ATTTGACCCCATTTCAGGTGTGGGATCTGTCCTATGAATCCATCAACTACATCTTTGCTTGTGACAACACCAGATCTGAACTGAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTTTCTTTTTCCCTGTTaGGAATCTCGGCAAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTEISLKTKSFNFSEGSRFLFPC*ESRQDA Trigger: TGCATCTTGCCGAGATTCCAAACAGGGAAAAAGAAA...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTCACAAATGTCTGCCAGTTGATATTCTaGAGAAAGGTATGTCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPEDKEFQLLRRFTVTNVCQLIF*RKVCRK Trigger: TTTGCGACATACCTTTCTCAAGAATATCAACTGGCA...GACATTTGTGACCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGAGATTTCCCTGAAGACAAAGAGTTTCAACTTCTCAGAAGGTTCACGGTGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KTEISLKTKSFNFSEGSRCFCCQ*IFLRKV Trigger: TACCTTTCTCAAGAATATCAACTGGCAGCAGAAACA...CCGTGAACCTTCTGAGAAGTTGAAACTCTTTGTCTTCAGGGAAATCTCTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACCAAGAAGTCGTTAGCTaGTCCTATAGTTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLILERVKGSGRSLIKPNQEVVS*SYSWIS Trigger: GGAGATCCAACTATAGGACAAGCTAACGACTTCTTG...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACGGGACTGTCTGGCTTTaGATGTTTGAGGTCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: KLILERVKGSGRSLIKPNGTVWL*MFEVKQ Trigger: TTGTTTGACCTCAAACATCAAAAGCCAGACAGTCCC...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTAATACTTGAAAGGGTAAAAGGAAGTGGAAGGAGTCTGATTAAACCTAACTGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLILERVKGSGRSLIKPNCFCCQ*IFLRKV Trigger: TACCTTTCTCAAGAATATCAACTGGCAGCAGAAACA...GTTAGGTTTAATCAGACTCCTTCCACTTCCTTTTACCCTTTCAAGTATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110665.8 ENSMUST00000119031.8 |
||
| CDS CAA 72 bp | CACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTaGGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HEGYLVLPHEVH*VQGPCLRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS CCA 72 bp | TCGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTTaGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRGIWCCLTKST*SRAPASEALRN Trigger: ATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000119031.8 |
||
| CDS CCA 72 bp | ACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTTaGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TRGIWCCLTKST*SRAPASEALRN Trigger: ATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS CAA 72 bp | TTCGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTaGGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FEGYLVLPHEVH*VQGPCLRGAKE Trigger: TTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000119031.8 |
||
| CDS CAA 90 bp | TGCTTCCAACACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTaGGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAATGTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CFQHEGYLVLPHEVH*VQGPCLRGAKECPM Trigger: CATGGGACATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGTGTTGGAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS CAA 90 bp | CAAACAAAGTTCGAGGGGTATCTGGTGTTGCCTCACGAAGTCCACTaGGTCCAGGGCCCCTGCCTCAGAGGCGCTAAGGAATGTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QTKFEGYLVLPHEVH*VQGPCLRGAKECPM Trigger: CATGGGACATTCCTTAGCGCCTCTGAGGCAGGGGCCCTGGACCAAGTGGACTTCGTGAGGCAACACCAGATACCCCTCGAACTTTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000119031.8 |
||
| CDS CAA 90 bp | GCCTCAGCAGAAGAGGGCCTGCCCTGCACATGTAGAGCTCTGCATTaGCTTCCAACACGAGGGGTATCTGGTGTTGCCTCACGAAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASAEEGLPCTCRALH*LPTRGVSGVASRSP Trigger: TGGACTTCGTGAGGCAACACCAGATACCCCTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
||
| CDS GCA 72 bp | GAGTGGGGATGTGCCTCAGCAGAAGAGGGCCTGCCCTaGACATGTAGAGCTCTGCATTTGCTTCCAACACGA | + |
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Preference number: 6 (lower is better) Translates to: EWGCASAEEGLP*TCRALHLLPTR Trigger: TCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS GCA 72 bp | AAGAGGGCCTGCCCTGCACATGTAGAGCTCTGCATTTaGTTCCAACACGAGGGGTATCTGGTGTTGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: KRACPAHVELCI*FQHEGYLVLPH Trigger: GTGAGGCAACACCAGATACCCCTCGTGTTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS GCA 72 bp | GTTCTGAGTGGGGATGTGCCTCAGCAGAAGAGGGCCTaGCCTGCACATGTAGAGCTCTGCATTTGCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VLSGDVPQQKRA*PAHVELCICFQ Trigger: TTGGAAGCAAATGCAGAGCTCTACATGTGCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS CCA 72 bp | AAATGTTCATTACTTGTGATGTGGACTTGTTCTGAGTaGGGATGTGCCTCAGCAGAAGAGGGCCTGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: KCSLLVMWTCSE*GCASAEEGLPC Trigger: GCAGGGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACATCACAAGTAATGAACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS TCA 72 bp | CACAAAATGTTCATTACTTGTGATGTGGACTTGTTCTaGGTGGGGATGTGCCTCAGCAGAAGAGGGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HKMFITCDVDLF*VGMCLSRRGPA Trigger: GGCAGGCCCTCTTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACATCACAAGTAATGAACATTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS GCA 72 bp | AGTGCTCCTCAGCTCCAGGTACTTGACACCATCATCTaGAAATTCCTTAATGACGTCTTTTGTGACCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SAPQLQVLDTII*KFLNDVFCDHQ Trigger: CTGATGGTCACAAAAGACGTCATTAAGGAATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS CAA 72 bp | TTTTCTTCTCTGGGAGTGCTCCTCAGCTCCAGGTACTaGACACCATCATCTGCAAATTCCTTAATGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: FSSLGVLLSSRY*TPSSANSLMTS Trigger: AGACGTCATTAAGGAATTTGCAGATGATGGTGTCAAGTACCTGGAGCTGAGGAGCACTCCCAGAGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS TCA 72 bp | GTTCAGATCTGGTGTTGTCACAAGCAAAGATGTAGTTaGTGGATTCATAGGACAGATCCCACACCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: VQIWCCHKQRCS*WIHRTDPTPEM Trigger: CATTTCAGGTGTGGGATCTGTCCTATGAATCCATCAACTACATCTTTGCTTGTGACAACACCAGATCTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS CCA 72 bp | GTCAATCATGGTCATGTGACCATGAACGTTAAGATGTaGCTTCTTGGCTATCAGTTTCTTCATGGTACTGGA | + |
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Preference number: 6 (lower is better) Translates to: VNHGHVTMNVKM*LLGYQFLHGTG Trigger: TCCAGTACCATGAAGAAACTGATAGCCAAGAAGCCACATCTTAACGTTCATGGTCACATGACCATGATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066155.6 ENSMUST00000119031.8 |
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| CDS CCA 72 bp | AACAAAGTTCCCACAAAATGTTCATTACTTGTGATGTaGACTTGTTCTGAGTGGGGATGTGCCTCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: NKVPTKCSLLVM*TCSEWGCASAE Trigger: TTCTGCTGAGGCACATCCCCACTCAGAACAAGTCCACATCACAAGTAATGAACATTTTGTGGGAACTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS GCA 72 bp | CCACACCTGAAATGGGGTCAAATTAAATGTTTCTGCTaGCAGTTGATATTCTTGAGAAAGGTATGTCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PHLKWGQIKCFC*QLIFLRKVCRK Trigger: TTTGCGACATACCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATTTGACCCCATTTCAGGTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS CAA 90 bp | ATCCCACACCTGAAATGGGGTCAAATTAAATGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTATGTCGCAAAAACACCTTTATCATC | + |
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Preference number: 6 (lower is better) Translates to: IPHLKWGQIKCFCCQ*IFLRKVCRKNTFII Trigger: GATGATAAAGGTGTTTTTGCGACATACCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATTTGACCCCATTTCAGGTGTGGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS TCA 72 bp | CTGATCATAAGAAGGGACTGTCTGGCTTTTGATGTTTaGGGTCAAACAAAGTTCCCACAAAATGTTCATTAC | + |
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Preference number: 6 (lower is better) Translates to: LIIRRDCLAFDV*GQTKFPQNVHY Trigger: GTAATGAACATTTTGTGGGAACTTTGTTTGACCTCAAACATCAAAAGCCAGACAGTCCCTTCTTATGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110665.8 |
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| CDS CAA 72 bp | CTGAAATGGGGTCAAATTAAATGTTTCTGCTGCCAGTaGATATTCTTGAGAAAGGTATGTCGCAAAAACACC | + |
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Preference number: 6 (lower is better) Translates to: LKWGQIKCFCCQ*IFLRKVCRKNT Trigger: GGTGTTTTTGCGACATACCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATTTGACCCCATTTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS CAA 90 bp | CTGAAATGGGGTCAAATTAAATGTTTCTGCTGCCAGTTGATATTCTaGAGAAAGGTATGTCGCAAAAACACCTTTATCATCAGTACAGAT | + |
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Preference number: 6 (lower is better) Translates to: LKWGQIKCFCCQLIF*RKVCRKNTFIISTD Trigger: ATCTGTACTGATGATAAAGGTGTTTTTGCGACATACCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATTTGACCCCATTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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| CDS CAA 72 bp | GGTCAAATTAAATGTTTCTGCTGCCAGTTGATATTCTaGAGAAAGGTATGTCGCAAAAACACCTTTATCATC | + |
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Preference number: 6 (lower is better) Translates to: GQIKCFCCQLIF*RKVCRKNTFII Trigger: GATGATAAAGGTGTTTTTGCGACATACCTTTCTCAAGAATATCAACTGGCAGCAGAAACATTTAATTTGACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028702.10 ENSMUST00000066155.6 ENSMUST00000110662.9 ENSMUST00000110665.8 ENSMUST00000119031.8 |
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