RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADAD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024266

Ensembl transcript IDs: ENSMUST00000098361.4

Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCTCACCCGGTATGCTCTTCCCCCACCCTACTCCACCCCAGTCTaGTCCCAGTATGTTCTTCCGCTGTTGAGGTTCAACTCCACTAGG +
Preference number: 1 (lower is better)
Translates to: TLTRYALPPPYSTPV*SQYVLPLLRFNSTR
Trigger: CCTAGTGGAGTTGAACCTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGAAGAGCATACCGGGTGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCGGTCCAAGCCGGCACTaGCCACGGCTGCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPGPSRH*PRLHSA
Trigger: AGCGCTGTGCAGCCGTGGTCAGTGCCGGCTTGGACC...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp GCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCCAGCTTGTCGCTGGCTaGGAGGCAGCCCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: AVRCHRTPQAPVLVPPSPQLVAG*EAAHVG
Trigger: ACCCACGTGGGCTGCCTCTCAGCCAGCGACAAGCTG...GGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCGCCTCCGTGGGCTCCTaGCCTCCTGAGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CHRTPQAPVLVPPSPGMLASVGS*PPEGFQ
Trigger: TTGGAAGCCCTCAGGAGGGCAGGAGCCCACGGAGGC...GAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTTCAGGCTGTGGCAGGTaGTGGGCCCGGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SQDSPGPSSSPTLTRYALSGCGR*WARGQR
Trigger: CCTCTGACCCCGGGCCCAGCACCTGCCACAGCCTGA...AAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCTCCCAGCCCAAGGATaGCCCAACGGGCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPLPAQG*PNGPAC
Trigger: ACAAGCTGGCCCGTTGGGCCATCCTTGGGCTGGGAG...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp CACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCAGTGGCGGCAGGAAGTaGGCTAGCAGCCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HRTPQAPVLVPPSPGMLFSGGRK*ASSPPP
Trigger: GGGAGGTGGGCTGCTAGCCCACTTCCTGCCGCCACT...GAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp GCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCCCTCTCTCTCCAGGATaGCTGCAGCCACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AVRCHRTPQAPVLVPPSPPLSPG*LQPPSP
Trigger: AGGGGACGGTGGCTGCAGTCATCCTGGAGAGAGAGG...GGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp CTCTTCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTGGGCCCTGCGGGCGATaGCCAGACCATGGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LFPHPTPPQSAPSMFFRCGPCGR*PDHGSR
Trigger: ACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCC...ACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCGGAAGGCTGGGCTGTaGAGGACGCTGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPRKAGL*RTLSSE
Trigger: CTCAGAAGACAGCGTCCTGCACAGCCCAGCCTTCCG...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACAGGCCCCCAGGCCCTaGTGGTCCAGGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SAVRCHRTPQAPVLVPPSQAPRP*WSRRRE
Trigger: CTCTCTCCTCCTGGACCAGCAGGGCCTGGGGGCCTG...TGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCGCGCTGCCTGCTGTTTaGCTTCCAGCTTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPALPAV*LPACCS
Trigger: GGAGCAGCAAGCTGGAAGCCAAACAGCAGGCAGCGC...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp CACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCGCGATGACCAGACCATaGCAGTCGTGGAGCCGACGG +
Preference number: 4 (lower is better)
Translates to: HRTPQAPVLVPPSPGMLFAMTRP*QSWSRR
Trigger: CCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGC...GAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp CCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCCACCCTACTGCTTCTGGATGTACTaGAGGGCAGAGAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGPSSSPTLTRYALPPPYCFWMY*RAESAA
Trigger: GGCAGCGCTCTCTGCCCTTCAGTACATCCAGAAGCA...GTAGGGTGGGGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCAGTCGAGGTCTCCTaGGCCCACCCTCGTCCACAC +
Preference number: 4 (lower is better)
Translates to: SAVRCHRTPQAPVLVPPSPVEVS*AHPRPH
Trigger: GTGTGGACGAGGGTGGGCGCAGGAGACCTCGACTGG...TGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGCCTGTGGGCCTCTTGTaGCCCAGCCACCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVEPVGLL*PSHPML
Trigger: GAGCATGGGGTGGCTGGGGCACAAGAGGCCCACAGG...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCAAGGGCAGAGAGCGCTaGCTGCTGTTTGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPKGRER*LLFGFQ
Trigger: CTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTT...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGGAGAGGCAGCCCACGTaGGTATCTCGGAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVEERQPT*VSRRAG
Trigger: GCCTGCCCTCCGAGATACCCACGTGGGCTGCCTCTC...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCAGGGCCAGCTTGTCGCTaGCTGAGAGGCAGCCCACGT +
Preference number: 4 (lower is better)
Translates to: SAVRCHRTPQAPVLVPPSGPACR*LRGSPR
Trigger: ACGTGGGCTGCCTCTCAGCCAGCGACAAGCTGGCCC...TGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp AGACATACAAGCCCCTCTACTCCTCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCCAGGCTCCAGTTaGGGCTCAGGCTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RHTSPSTPQQLGVTGLPRPPGSS*GSGCGR
Trigger: CCTGCCACAGCCTGAGCCTCAACTGGAGCCTGGGGG...CCTGGGGAGTCCTGTGACACCTAACTGCTGAGGAGTAGAGGGGCTTGTATGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp CACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCAACCTGGCGGAATGCTaGGAGGAAGGCGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: HRTPQAPVLVPPSPGMLFNLAEC*EEGGFA
Trigger: TGCAAAGCCGCCTTCCTCTCAGCATTCCGCCAGGTT...GAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCGGAGGAGCCAGGACCTaGAGTCTGGTCCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPGGART*SLVLQK
Trigger: TTTTTGGAGGACCAGACTGCAGGTCCTGGCTCCTCC...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCGCAGAGAGCGCTGCCTaGTGTTTGGCTTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CHRTPQAPVLVPPSPGMLAESAA*CLASSL
Trigger: CAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGC...GAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp AGACATACAAGCCCCTCTACTCCTCAGCAGTTAGGTGTCACAGGACTCCCCAGGCATCCCCAGCCTCCGTaGGCTCCTGCCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RHTSPSTPQQLGVTGLPRHPQPP*APALLR
Trigger: CCTCAGGAGGGCAGGAGCCCACGGAGGCTGGGGATG...CCTGGGGAGTCCTGTGACACCTAACTGCTGAGGAGTAGAGGGGCTTGTATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR TCA 90 bp TGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCCAGGACGCTGTCTTCTaGGGCCAGTGGGAGATAGAT +
Preference number: 4 (lower is better)
Translates to: CHRTPQAPVLVPPSPGMLQDAVF*GQWEID
Trigger: ATCTATCTCCCACTGGCCTCAGAAGACAGCGTCCTG...GAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGACGGCTGCACAGCGCTaGTCGTGGGTCAGGATAGTC +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVETAAQR*SWVRIV
Trigger: GACTATCCTGACCCACGAGCAGCGCTGTGCAGCCGT...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp TCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTAGCTGCTGCTGCCTGTaGCTAGTGCCACCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SQDSPGPSSSPTLTRYALSCCCL*LVPPAH
Trigger: ATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCT...AAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp GCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGTGACCAGTAGGAGCTaGCGGAAGAAGAACCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVRCHRTPQAPVLVPPSPVTSRS*RKKNLS
Trigger: GCTGAGGTTCTTCTTCCGGCAGCTCCTACTGGTCAC...GGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp CCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCCACCCTACACAGGTGCAAGGTGGTaGGGACATAGGGACATGGAA +
Preference number: 4 (lower is better)
Translates to: PGPSSSPTLTRYALPPPYTGARW*GHRDME
Trigger: TTCCATGTCCCTATGTCCGCACCACCTTGCACCTGT...GTAGGGTGGGGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp GCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGCACAGCGCTGCTCGTaGGTCAGGATAGTCTCTATG +
Preference number: 4 (lower is better)
Translates to: AVRCHRTPQAPVLVPPSPAQRCS*VRIVSM
Trigger: CATAGAGACTATCCTGACCCACGAGCAGCGCTGTGC...GGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTGTCCCCTTACAGGCCTaGTACGGTGAGCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SQDSPGPSSSPTLTRYALVPLQA*YGELSL
Trigger: GAGTGAGAGCTCACCGTACCAGGCCTGTAAGGGGAC...AAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp CTCTTCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTAGACCATGGCAGTCGTaGAGCCGACGGCCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LFPHPTPPQSAPSMFFRCRPWQS*SRRPEN
Trigger: GTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCT...ACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTGCTTCTCCAGAGCTCTaGCAACCTGGCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: SQDSPGPSSSPTLTRYALASPEL*QPGGML
Trigger: CAGCATTCCGCCAGGTTGCCAGAGCTCTGGAGAAGC...AAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCCCAGGACCTGCAGTCTaGTCCTCCAAAAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: CHRTPQAPVLVPPSPGMLPGPAV*SSKKVR
Trigger: TCTCACCTTTTTGGAGGACCAGACTGCAGGTCCTGG...GAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGAGTCACCAGGGGCTCTaGTCTCTCCAGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVESHQGL*SLQLLL
Trigger: CAGAAGCAGCTGGAGAGACCAGAGCCCCTGGTGACT...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp AGACATACAAGCCCCTCTACTCCTCAGCAGTTAGGTGTCACAGGACTCCCCAGGGTTTGGCTTCCAGCTTaGTGCTCCCTGTCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RHTSPSTPQQLGVTGLPRVWLPA*CSLSPQ
Trigger: CTGCGGGGACAGGGAGCAGCAAGCTGGAAGCCAAAC...CCTGGGGAGTCCTGTGACACCTAACTGCTGAGGAGTAGAGGGGCTTGTATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR GCA 90 bp CTCTTCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTCTCTCCAGGATGACTaGAGCCACCGTCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: LFPHPTPPQSAPSMFFRCSLQDD*SHRPLT
Trigger: TGTAAGGGGACGGTGGCTGCAGTCATCCTGGAGAGA...ACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTAGAGTTGAGGGGTCGTaGCAGGGATCAGCTAGAACA +
Preference number: 4 (lower is better)
Translates to: SQDSPGPSSSPTLTRYALRVEGS*QGSART
Trigger: TGTTCTAGCTGATCCCTGCCACGACCCCTCAACTCT...AAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGCAAACAGGTGCAAGGTaGTGCGGACATAGGGACATG +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVEQTGAR*CGHRDM
Trigger: CATGTCCCTATGTCCGCACCACCTTGCACCTGTTTG...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGTGCAGAGATAGAAGCTaGGGCTTCTCCAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVECRDRS*GFSRAL
Trigger: CAGAGCTCTGGAGAAGCCCCAGCTTCTATCTCTGCA...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp AGACATACAAGCCCCTCTACTCCTCAGCAGTTAGGTGTCACAGGACTCCCCAGGTGGCCAATGCTGCCTTaGACCTCTCTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RHTSPSTPQQLGVTGLPRWPMLP*TSLSRM
Trigger: CATCCTGGAGAGAGAGGTCCAAGGCAGCATTGGCCA...CCTGGGGAGTCCTGTGACACCTAACTGCTGAGGAGTAGAGGGGCTTGTATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CCA 90 bp TCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCAGCTCATAGGTCTCTTTaGAGTGGCCAATGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAVRCHRTPQAPVLVPPSAHRSL*SGQCCL
Trigger: AAGGCAGCATTGGCCACTCCAAAGAGACCTATGAGC...TGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp GTGGGCTCCTGCCCTCCTGAGGGCTTCCAAGGCCCGGGGCTGATCTaGAGCGACGCTGCCAGTCGAGGTCTCCTGCGCCCACCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: VGSCPPEGFQGPGLI*SDAASRGLLRPPSS
Trigger: GGACGAGGGTGGGCGCAGGAGACCTCGACTGGCAGCGTCGCTGCAGATCAGCCCCGGGCCTTGGAAGCCCTCAGGAGGGCAGGAGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp GCCCACCTCCCAGCCCAAGGATGGCCCAACGGGCCAGCTTGTCGCTaGCTGAGAGGCAGCCCACGTGGGTATCTCGGAGGGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: AHLPAQGWPNGPACR*LRGSPRGYLGGQAP
Trigger: TGGCGCCTGCCCTCCGAGATACCCACGTGGGCTGCCTCTCAGCCAGCGACAAGCTGGCCCGTTGGGCCATCCTTGGGCTGGGAGGTGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp AACCTCAGCAGGGCCCTGCGGGCGATGACCAGACCATGGCAGTCGTaGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCGCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NLSRALRAMTRPWQS*SRRPENSSQPAQLL
Trigger: CAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp GAGACACCCAGGTTAGCCATGCACTGGGTGAGCAGGGCCACGGCTTaGGCCGGGGGTGGGTCCTTGGGCAGCATGCTGAGCCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: ETPRLAMHWVSRATA*AGGGSLGSMLSPWR
Trigger: CCTCCATGGGCTCAGCATGCTGCCCAAGGACCCACCCCCGGCCCAAGCCGTGGCCCTGCTCACCCAGTGCATGGCTAACCTGGGTGTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp CGGAAGAAGAACCTCAGCAGGGCCCTGCGGGCGATGACCAGACCATaGCAGTCGTGGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RKKNLSRALRAMTRP*QSWSRRPENSSQPA
Trigger: CGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTTCTTCTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp ACCTCCCAGCCCAAGGATGGCCCAACGGGCCAGCTTGTCGCTGGCTaGGAGGCAGCCCACGTGGGTATCTCGGAGGGCAGGCGCCACATA +
Preference number: 5 (lower is better)
Translates to: TSQPKDGPTGQLVAG*EAAHVGISEGRRHI
Trigger: TATGTGGCGCCTGCCCTCCGAGATACCCACGTGGGCTGCCTCTCAGCCAGCGACAAGCTGGCCCGTTGGGCCATCCTTGGGCTGGGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCGCCCAACGGGCCAGCTaGTCGCTGGCTGAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPAQRAS*SLAERQ
Trigger: CTGCCTCTCAGCCAGCGACAAGCTGGCCCGTTGGGC...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp TGGCCACATCAACAACTTCGATGTCAGGGTCCCCCAGGCTCCAGTTaGGGCTCAGGCTGTGGCAGGTGCTGGGCCCGGGGTCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: WPHQQLRCQGPPGSS*GSGCGRCWARGQRG
Trigger: CCCCCTCTGACCCCGGGCCCAGCACCTGCCACAGCCTGAGCCTCAACTGGAGCCTGGGGGACCCTGACATCGAAGTTGTTGATGTGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp GGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCGCAGCTGCTGCTaGCTGTGCCTAGTGCCACCAGCTCATAGGTCTCTTTGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GADGLRTPASRRSCC*LCLVPPAHRSLWSG
Trigger: GCCACTCCAAAGAGACCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp CTCCAGGATGACTGCAGCCACCGTCCCCTTACAGGCCTGGTACGGTaGGCTCTCACTCAGGAGTCGGTCCAAGCCGGCACTGACCACGGC +
Preference number: 5 (lower is better)
Translates to: LQDDCSHRPLTGLVR*ALTQESVQAGTDHG
Trigger: GCCGTGGTCAGTGCCGGCTTGGACCGACTCCTGAGTGAGAGCTCACCGTACCAGGCCTGTAAGGGGACGGTGGCTGCAGTCATCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp GTAGGAGCTGCCGGAAGAAGAACCTCAGCAGGGCCCTGCGGGCGATaGCCAGACCATGGCAGTCGTGGAGCCGACGGCCTGAGAACTCCA +
Preference number: 5 (lower is better)
Translates to: VGAAGRRTSAGPCGR*PDHGSRGADGLRTP
Trigger: TGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTTCTTCTTCCGGCAGCTCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp CGTGGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCGCAGCTGCTaGTGCCTGTGCCTAGTGCCACCAGCTCATAGGTCTCTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: RGADGLRTPASRRSC*CLCLVPPAHRSLWS
Trigger: ACTCCAAAGAGACCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp AGTCGTGGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCGCAGCTaGTGCTGCCTGTGCCTAGTGCCACCAGCTCATAGGTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SRGADGLRTPASRRS*CCLCLVPPAHRSLW
Trigger: CCAAAGAGACCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp TGGTCCTCCAAAAAGGTGAGAGAGACACCCAGGTTAGCCATGCACTaGGTGAGCAGGGCCACGGCTTGGGCCGGGGGTGGGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WSSKKVRETPRLAMH*VSRATAWAGGGSLG
Trigger: GCCCAAGGACCCACCCCCGGCCCAAGCCGTGGCCCTGCTCACCCAGTGCATGGCTAACCTGGGTGTCTCTCTCACCTTTTTGGAGGACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGGCCGGGGGTGGGTCCTaGGGCAGCATGCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVEAGGGS*GSMLSP
Trigger: TGGGCTCAGCATGCTGCCCAAGGACCCACCCCCGGC...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp CCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCCACCCTACGCCCCCTTGGGGGTGTaGCTCACATACAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGPSSSPTLTRYALPPPYAPLGV*LTYRCR
Trigger: CCTGCACCTGTATGTGAGCAACACCCCCAAGGGGGC...GTAGGGTGGGGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp TGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTCCCCCAGGCTCCAGTaGAGGCTCAGGCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: CHRTPQAPVLVPPSPGMLSPRLQ*RLRLWQ
Trigger: CTGCCACAGCCTGAGCCTCAACTGGAGCCTGGGGGA...GAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp CAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCAGCGCTGCCTGCTGTTaGGCTTCCAGCTTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QDSPGPSSSPTLTRYALPSAACC*ASSLLL
Trigger: GAGCAGCAAGCTGGAAGCCAAACAGCAGGCAGCGCT...GGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp CCAGGCCCCAGTTCTAGTCCCACCCTCACCCGGTATGCTCTTCCCCCACCCTACTCATGGGCTGCCCCCTaGGGGGTGTTGCTCACATAC +
Preference number: 5 (lower is better)
Translates to: PGPSSSPTLTRYALPPPYSWAAP*GVLLTY
Trigger: GTATGTGAGCAACACCCCCAAGGGGGCAGCCCATGA...GTAGGGTGGGGGAAGAGCATACCGGGTGAGGGTGGGACTAGAACTGGGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp ACTGAAGGGCAGAGAGCGCTGCCTGCTGTTTGGCTTCCAGCTTGCTaGTCCCTGTCCCCGCAGGACAGACCAACCCATCCAGGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: TEGQRALPAVWLPAC*SLSPQDRPTHPGLH
Trigger: GTGCAGACCTGGATGGGTTGGTCTGTCCTGCGGGGACAGGGAGCAGCAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp TCAGCAGTTAGGTGTCACAGGACTCCCCAGGCCCCAGTTCTAGTCCCACCCTCATACCCACCAATGGCTTaGAGGGCCAGGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SAVRCHRTPQAPVLVPPSYPPMA*RARPPG
Trigger: GCCTGGGGGCCTGGCCCTCAAAGCCATTGGTGGGTA...TGAGGGTGGGACTAGAACTGGGGCCTGGGGAGTCCTGTGACACCTAACTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp TGTACTGAAGGGCAGAGAGCGCTGCCTGCTGTTTGGCTTCCAGCTTaGTGCTCCCTGTCCCCGCAGGACAGACCAACCCATCCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: CTEGQRALPAVWLPA*CSLSPQDRPTHPGL
Trigger: CAGACCTGGATGGGTTGGTCTGTCCTGCGGGGACAGGGAGCAGCAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTTCAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp GCTGCTTCTGGATGTACTGAAGGGCAGAGAGCGCTGCCTGCTGTTTaGCTTCCAGCTTGCTGCTCCCTGTCCCCGCAGGACAGACCAACC +
Preference number: 5 (lower is better)
Translates to: AASGCTEGQRALPAV*LPACCSLSPQDRPT
Trigger: GGTTGGTCTGTCCTGCGGGGACAGGGAGCAGCAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTTCAGTACATCCAGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp TCGTGGGTCAGGATAGTCTCTATGCTGAGAGAGGTGAGCAGAGGCTaGCGGGGAGTCACCAGGGGCTCTGGTCTCTCCAGCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SWVRIVSMLREVSRG*RGVTRGSGLSSCFW
Trigger: CCAGAAGCAGCTGGAGAGACCAGAGCCCCTGGTGACTCCCCGCCAGCCTCTGCTCACCTCTCTCAGCATAGAGACTATCCTGACCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp CGGGGTCAGAGGGGGCGACCAGAGGCCCAGCAAACAGGTGCAAGGTaGTGCGGACATAGGGACATGGAAGACACGATCCCAAGACACTGT +
Preference number: 5 (lower is better)
Translates to: RGQRGRPEAQQTGAR*CGHRDMEDTIPRHC
Trigger: ACAGTGTCTTGGGATCGTGTCTTCCATGTCCCTATGTCCGCACCACCTTGCACCTGTTTGCTGGGCCTCTGGTCGCCCCCTCTGACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp GGAGTCACCAGGGGCTCTGGTCTCTCCAGCTGCTTCTGGATGTACTaGAGGGCAGAGAGCGCTGCCTGCTGTTTGGCTTCCAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GVTRGSGLSSCFWMY*RAESAACCLASSLL
Trigger: CAGCAAGCTGGAAGCCAAACAGCAGGCAGCGCTCTCTGCCCTTCAGTACATCCAGAAGCAGCTGGAGAGACCAGAGCCCCTGGTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp CTCTTCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGTTTGGCTTCCAGCTaGCTGCTCCCTGTCCCCGCA +
Preference number: 5 (lower is better)
Translates to: LFPHPTPPQSAPSMFFRCCLASS*LLPVPA
Trigger: TGCGGGGACAGGGAGCAGCAAGCTGGAAGCCAAACA...ACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS-3UTR CAA 90 bp TCCCCCACCCTACTCCACCCCAGTCTGCTCCCAGTATGTTCTTCCGCTGTTGAGGTGGCCAATGCTGCCTaGGACCTCTCTCTCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SPTLLHPSLLPVCSSAVEVANAA*DLSLQD
Trigger: ATCCTGGAGAGAGAGGTCCAAGGCAGCATTGGCCAC...CTCAACAGCGGAAGAACATACTGGGAGCAGACTGGGGTGGAGTAGGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 90 bp CCTCATAGGTCTGCAGAGATAGAAGCTGGGGCTTCTCCAGAGCTCTaGCAACCTGGCGGAATGCTGAGAGGAAGGCGGCTTTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PHRSAEIEAGASPEL*QPGGMLRGRRLCRD
Trigger: GTCTCTGCAAAGCCGCCTTCCTCTCAGCATTCCGCCAGGTTGCCAGAGCTCTGGAGAAGCCCCAGCTTCTATCTCTGCAGACCTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 90 bp CAACCCATCCAGGTCTGCACACACAGAGAAGGAGGAGCCAGGACCTaGAGTCTGGTCCTCCAAAAAGGTGAGAGAGACACCCAGGTTAGC +
Preference number: 5 (lower is better)
Translates to: QPIQVCTHREGGART*SLVLQKGERDTQVS
Trigger: GCTAACCTGGGTGTCTCTCTCACCTTTTTGGAGGACCAGACTGCAGGTCCTGGCTCCTCCTTCTCTGTGTGTGCAGACCTGGATGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 90 bp CATGGAAGACACGATCCCAAGACACTGTCTAGTCTAGGCCGGGAATaGATGACCCGGTTCAGAGTTGAGGGGTCGTGGCAGGGATCAGCT +
Preference number: 5 (lower is better)
Translates to: HGRHDPKTLSSLGRE*MTRFRVEGSWQGSA
Trigger: AGCTGATCCCTGCCACGACCCCTCAACTCTGAACCGGGTCATTCATTCCCGGCCTAGACTAGACAGTGTCTTGGGATCGTGTCTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp GCACTGGGTGAGCAGGGCCACGGCTTGGGCCGGGGGTaGGTCCTTGGGCAGCATGCTGAGCCCATGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ALGEQGHGLGRG*VLGQHAEPMEG
Trigger: GCCCTCCATGGGCTCAGCATGCTGCCCAAGGACCCACCCCCGGCCCAAGCCGTGGCCCTGCTCACCCAGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp GGGCTTCCAAGGCCCGGGGCTGATCTGCAGCGACGCTaGCAGTCGAGGTCTCCTGCGCCCACCCTCGTCCAC +
Preference number: 6 (lower is better)
Translates to: GLPRPGADLQRR*QSRSPAPTLVH
Trigger: GTGGACGAGGGTGGGCGCAGGAGACCTCGACTGGCAGCGTCGCTGCAGATCAGCCCCGGGCCTTGGAAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AGGGCCCTGCGGGCGATGACCAGACCATGGCAGTCGTaGAGCCGACGGCCTGAGAACTCCAGCCAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: RALRAMTRPWQS*SRRPENSSQPA
Trigger: CGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp GCTCCTGCCCTCCTGAGGGCTTCCAAGGCCCGGGGCTaGTCTGCAGCGACGCTGCCAGTCGAGGTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: APALLRASKARG*SAATLPVEVSC
Trigger: GCAGGAGACCTCGACTGGCAGCGTCGCTGCAGATCAGCCCCGGGCCTTGGAAGCCCTCAGGAGGGCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp GATGACCAGACCATGGCAGTCGTGGAGCCGACGGCCTaGGAACTCCAGCCAGCCGGCGCAGCTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DDQTMAVVEPTA*ELQPAGAAAAA
Trigger: GGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp GCCGGAAGAAGAACCTCAGCAGGGCCCTGCGGGCGATaGCCAGACCATGGCAGTCGTGGAGCCGACGGCCTG +
Preference number: 6 (lower is better)
Translates to: AGRRTSAGPCGR*PDHGSRGADGL
Trigger: CAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTTCTTCTTCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp CCCAAGGATGGCCCAACGGGCCAGCTTGTCGCTGGCTaGGAGGCAGCCCACGTGGGTATCTCGGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: PKDGPTGQLVAG*EAAHVGISEGR
Trigger: CCTGCCCTCCGAGATACCCACGTGGGCTGCCTCTCAGCCAGCGACAAGCTGGCCCGTTGGGCCATCCTTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp GCCGACGGCCTGAGAACTCCAGCCAGCCGGCGCAGCTaGTGCTGCCTGTGCCTAGTGCCACCAGCTCATAGG +
Preference number: 6 (lower is better)
Translates to: ADGLRTPASRRS*CCLCLVPPAHR
Trigger: CCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCCGTCGGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp CCAGCCCAAGGATGGCCCAACGGGCCAGCTTGTCGCTaGCTGAGAGGCAGCCCACGTGGGTATCTCGGAGGG +
Preference number: 6 (lower is better)
Translates to: PAQGWPNGPACR*LRGSPRGYLGG
Trigger: CCCTCCGAGATACCCACGTGGGCTGCCTCTCAGCCAGCGACAAGCTGGCCCGTTGGGCCATCCTTGGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AACCTCAGCAGGGCCCTGCGGGCGATGACCAGACCATaGCAGTCGTGGAGCCGACGGCCTGAGAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: NLSRALRAMTRP*QSWSRRPENSS
Trigger: GCTGGAGTTCTCAGGCCGTCGGCTCCACGACTGCCATGGTCTGGTCATCGCCCGCAGGGCCCTGCTGAGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CAA 90 bp GTGGCCACATCAACAACTTCGATGTCAGGGTCCCCCAGGCTCCAGTaGAGGCTCAGGCTGTGGCAGGTGCTGGGCCCGGGGTCAGAGGGG +
Preference number: 6 (lower is better)
Translates to: VATSTTSMSGSPRLQ*RLRLWQVLGPGSEG
Trigger: CCCCTCTGACCCCGGGCCCAGCACCTGCCACAGCCTGAGCCTCAACTGGAGCCTGGGGGACCCTGACATCGAAGTTGTTGATGTGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp GACTGCAGCCACCGTCCCCTTACAGGCCTGGTACGGTaGGCTCTCACTCAGGAGTCGGTCCAAGCCGGCACT +
Preference number: 6 (lower is better)
Translates to: DCSHRPLTGLVR*ALTQESVQAGT
Trigger: AGTGCCGGCTTGGACCGACTCCTGAGTGAGAGCTCACCGTACCAGGCCTGTAAGGGGACGGTGGCTGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp GGCCTGAGAACTCCAGCCAGCCGGCGCAGCTGCTGCTaGCTGTGCCTAGTGCCACCAGCTCATAGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: GLRTPASRRSCC*LCLVPPAHRSL
Trigger: AAGAGACCTATGAGCTGGTGGCACTAGGCACAGGCAGCAGCAGCTGCGCCGGCTGGCTGGAGTTCTCAGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AAAAAGGTGAGAGAGACACCCAGGTTAGCCATGCACTaGGTGAGCAGGGCCACGGCTTGGGCCGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: KKVRETPRLAMH*VSRATAWAGGG
Trigger: CCCACCCCCGGCCCAAGCCGTGGCCCTGCTCACCCAGTGCATGGCTAACCTGGGTGTCTCTCTCACCTTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp CCCTGTCCCCGCAGGACAGACCAACCCATCCAGGTCTaGACACACAGAGAAGGAGGAGCCAGGACCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PCPRRTDQPIQV*THREGGARTCS
Trigger: ACTGCAGGTCCTGGCTCCTCCTTCTCTGTGTGTGCAGACCTGGATGGGTTGGTCTGTCCTGCGGGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp CGGTCCAAGCCGGCACTGACCACGGCTGCACAGCGCTaGTCGTGGGTCAGGATAGTCTCTATGCTGAGAGAG +
Preference number: 6 (lower is better)
Translates to: RSKPALTTAAQR*SWVRIVSMLRE
Trigger: CTCTCTCAGCATAGAGACTATCCTGACCCACGAGCAGCGCTGTGCAGCCGTGGTCAGTGCCGGCTTGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp AGTGGCCAATGCTGCCTTGGACCTCTCTCTCCAGGATaGCTGCAGCCACCGTCCCCTTACAGGCCTGGTACG +
Preference number: 6 (lower is better)
Translates to: SGQCCLGPLSPG*LQPPSPYRPGT
Trigger: CGTACCAGGCCTGTAAGGGGACGGTGGCTGCAGTCATCCTGGAGAGAGAGGTCCAAGGCAGCATTGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp ACTCAGGAGTCGGTCCAAGCCGGCACTGACCACGGCTaGACAGCGCTGCTCGTGGGTCAGGATAGTCTCTAT +
Preference number: 6 (lower is better)
Translates to: TQESVQAGTDHG*TALLVGQDSLY
Trigger: ATAGAGACTATCCTGACCCACGAGCAGCGCTGTGCAGCCGTGGTCAGTGCCGGCTTGGACCGACTCCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp TCCAGGATGACTGCAGCCACCGTCCCCTTACAGGCCTaGTACGGTGAGCTCTCACTCAGGAGTCGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SRMTAATVPLQA*YGELSLRSRSK
Trigger: CTTGGACCGACTCCTGAGTGAGAGCTCACCGTACCAGGCCTGTAAGGGGACGGTGGCTGCAGTCATCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AGGGGGCGACCAGAGGCCCAGCAAACAGGTGCAAGGTaGTGCGGACATAGGGACATGGAAGACACGATCCCA +
Preference number: 6 (lower is better)
Translates to: RGRPEAQQTGAR*CGHRDMEDTIP
Trigger: TGGGATCGTGTCTTCCATGTCCCTATGTCCGCACCACCTTGCACCTGTTTGCTGGGCCTCTGGTCGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp GGGGCCCAACGCTGGAGTCAGTCTTCACACGTCCGGTaGCCACATCAACAACTTCGATGTCAGGGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: GAQRWSQSSHVR*PHQQLRCQGPP
Trigger: TGGGGGACCCTGACATCGAAGTTGTTGATGTGGCCACCGGACGTGTGAAGACTGACTCCAGCGTTGGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AGGCCAGTGGGAGATAGATGTCATGGGCTGCCCCCTTaGGGGTGTTGCTCACATACAGGTGCAGGAAGACCC +
Preference number: 6 (lower is better)
Translates to: RPVGDRCHGLPP*GCCSHTGAGRP
Trigger: GGGTCTTCCTGCACCTGTATGTGAGCAACACCCCCAAGGGGGCAGCCCATGACATCTATCTCCCACTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp AGAGCTGCTGGCGAGCTTCCCTGTAGGGGACAGCCTTaGCAGCCTCATAGGTCTGCAGAGATAGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: RAAGELPCRGQP*QPHRSAEIEAG
Trigger: CCCAGCTTCTATCTCTGCAGACCTATGAGGCTGCCAAGGCTGTCCCCTACAGGGAAGCTCGCCAGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CCA 72 bp TCTGCAGAGATAGAAGCTGGGGCTTCTCCAGAGCTCTaGCAACCTGGCGGAATGCTGAGAGGAAGGCGGCTT +
Preference number: 6 (lower is better)
Translates to: SAEIEAGASPEL*QPGGMLRGRRL
Trigger: AAGCCGCCTTCCTCTCAGCATTCCGCCAGGTTGCCAGAGCTCTGGAGAAGCCCCAGCTTCTATCTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS TCA 72 bp CACGATCCCAAGACACTGTCTAGTCTAGGCCGGGAATaGATGACCCGGTTCAGAGTTGAGGGGTCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: HDPKTLSSLGRE*MTRFRVEGSWQ
Trigger: CTGCCACGACCCCTCAACTCTGAACCGGGTCATTCATTCCCGGCCTAGACTAGACAGTGTCTTGGGATCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS GCA 72 bp CAGGTCTGCACACACAGAGAAGGAGGAGCCAGGACCTaGAGTCTGGTCCTCCAAAAAGGTGAGAGAGACACC +
Preference number: 6 (lower is better)
Translates to: QVCTHREGGART*SLVLQKGERDT
Trigger: GGTGTCTCTCTCACCTTTTTGGAGGACCAGACTGCAGGTCCTGGCTCCTCCTTCTCTGTGTGTGCAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4
CDS CAA 72 bp CAGCTCATAGGTCTCTTTGGAGTGGCCAATGCTGCCTaGGACCTCTCTCTCCAGGATGACTGCAGCCACCGT +
Preference number: 6 (lower is better)
Translates to: QLIGLFGVANAA*DLSLQDDCSHR
Trigger: ACGGTGGCTGCAGTCATCCTGGAGAGAGAGGTCCAAGGCAGCATTGGCCACTCCAAAGAGACCTATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098361.4