Pregenerated sensors for ACYP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008822Ensembl transcript IDs: ENSMUST00000008966.13, ENSMUST00000065913.8, ENSMUST00000117138.3, ENSMUST00000121930.2
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGTCAATGTGCGACTTGGGACTTCCTCTGGTCTCCAGCCACTGCTaGATGAAGCGCACCTTGGAGACGGGGCCCTGCAGTTGCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LSMCDLGLPLVSSHC*MKRTLETGPCSCPC Trigger: GCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAGTGGCTGGAGACCAGAGGAAGTCCCAAGTCGCACATTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CCA 90 bp | CCTCAGACTTCAACACGCGTATGCATACATGGGTATGCAGGATCCTaGCCACCAGGGGCTGGTGAAGGGGAAGACAGGAGCTGGTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PQTSTRVCIHGYAGS*PPGAGEGEDRSWWV Trigger: TACCCACCAGCTCCTGTCTTCCCCTTCACCAGCCCCTGGTGGCCAGGATCCTGCATACCCATGTATGCATACGCGTGTTGAAGTCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS GCA 90 bp | GGAGAACGGACTCCCGTAACTGGTCCTCAGACTTCAACACGCGTATaGATACATGGGTATGCAGGATCCTGGCCACCAGGGGCTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GERTPVTGPQTSTRV*IHGYAGSWPPGAGE Trigger: TTCACCAGCCCCTGGTGGCCAGGATCCTGCATACCCATGTATGCATACGCGTGTTGAAGTCTGAGGACCAGTTACGGGAGTCCGTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS CCA 90 bp | CCAGGCGCTAGCCAGAGCGGTCAAATTTATAGAGATCCAGCAAGATaGCGCACACTTGCCACCAAGCCCGGTGACCTGAGTTTGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGASQSGQIYRDPAR*RTLATKPGDLSLIP Trigger: AGGGATCAAACTCAGGTCACCGGGCTTGGTGGCAAGTGTGCGCCATCTTGCTGGATCTCTATAAATTTGACCGCTCTGGCTAGCGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS CAA 72 bp | GAAGCGCACCTTGGAGACGGGGCCCTGCAGTTGCCCTaGCACGGTGCCCCGGTCGGTGTTCTGAACCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EAHLGDGALQLP*HGAPVGVLNPA Trigger: GGCTGGGTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CAA 90 bp | CAGCCACTGCTGCATGAAGCGCACCTTGGAGACGGGGCCCTGCAGTaGCCCTTGCACGGTGCCCCGGTCGGTGTTCTGAACCCAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPLLHEAHLGDGALQ*PLHGAPVGVLNPAH Trigger: GTGGGCTGGGTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAGTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS GCA 72 bp | CCTTGGAGACGGGGCCCTGCAGTTGCCCTTGCACGGTaGCCCGGTCGGTGTTCTGAACCCAGCCCACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PWRRGPAVALAR*PGRCSEPSPPN Trigger: GTTTGGTGGGCTGGGTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS GCA 72 bp | CACTGCTGCATGAAGCGCACCTTGGAGACGGGGCCCTaGAGTTGCCCTTGCACGGTGCCCCGGTCGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: HCCMKRTLETGP*SCPCTVPRSVF Trigger: GAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CAA 90 bp | CTGCTGCATGAAGCGCACCTTGGAGACGGGGCCCTGCAGTTGCCCTaGCACGGTGCCCCGGTCGGTGTTCTGAACCCAGCCCACCAAACC | + |
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Preference number: 6 (lower is better) Translates to: LLHEAHLGDGALQLP*HGAPVGVLNPAHQT Trigger: GGTTTGGTGGGCTGGGTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CAA 72 bp | CTGCATGAAGCGCACCTTGGAGACGGGGCCCTGCAGTaGCCCTTGCACGGTGCCCCGGTCGGTGTTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LHEAHLGDGALQ*PLHGAPVGVLN Trigger: GTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CAA 72 bp | CCTCTGGTCTCCAGCCACTGCTGCATGAAGCGCACCTaGGAGACGGGGCCCTGCAGTTGCCCTTGCACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PLVSSHCCMKRT*ETGPCSCPCTV Trigger: CACCGTGCAAGGGCAACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAGTGGCTGGAGACCAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS GCA 72 bp | TGCGACTTGGGACTTCCTCTGGTCTCCAGCCACTGCTaGATGAAGCGCACCTTGGAGACGGGGCCCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CDLGLPLVSSHC*MKRTLETGPCS Trigger: ACTGCAGGGCCCCGTCTCCAAGGTGCGCTTCATGCAGCAGTGGCTGGAGACCAGAGGAAGTCCCAAGTCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS GCA 72 bp | CGTAATCCACTGAGACCAAGGTGTCCCCTTCTGCCATaGTCAAACCTGGGGCCTGAGCGCAGTAGCCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RNPLRPRCPLLP*SNLGPERSSRA Trigger: CGCTCGGCTACTGCGCTCAGGCCCCAGGTTTGAGCATGGCAGAAGGGGACACCTTGGTCTCAGTGGATTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121930.2 |
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| CDS TCA 72 bp | TGCAGTTGCCCTTGCACGGTGCCCCGGTCGGTGTTCTaGACCCAGCCCACCAAACCTAGCTTTTTACCCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSCPCTVPRSVF*TQPTKPSFLPS Trigger: TGAGGGTAAAAAGCTAGGTTTGGTGGGCTGGGTTCAGAACACCGACCGGGGCACCGTGCAAGGGCAACTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000008966.13 ENSMUST00000117138.3 ENSMUST00000121930.2 |
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| CDS CCA 72 bp | CCACCAGGGGCTGGTGAAGGGGAAGACAGGAGCTGGTaGGTAGAGCTTCAGCCTGAGTGTACTTGCGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: PPGAGEGEDRSW*VELQPECTCGK Trigger: TTTTCCGCAAGTACACTCAGGCTGAAGCTCTACCCACCAGCTCCTGTCTTCCCCTTCACCAGCCCCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS CAA 72 bp | TGGCGCACACTTGCCACCAAGCCCGGTGACCTGAGTTaGATCCCTGGAATCTACATGGTAGGGGAGAACGGA | + |
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Preference number: 6 (lower is better) Translates to: WRTLATKPGDLS*IPGIYMVGENG Trigger: TCCGTTCTCCCCTACCATGTAGATTCCAGGGATCAAACTCAGGTCACCGGGCTTGGTGGCAAGTGTGCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS GCA 72 bp | ACTCCCGTAACTGGTCCTCAGACTTCAACACGCGTATaGATACATGGGTATGCAGGATCCTGGCCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TPVTGPQTSTRV*IHGYAGSWPPG Trigger: CCCTGGTGGCCAGGATCCTGCATACCCATGTATGCATACGCGTGTTGAAGTCTGAGGACCAGTTACGGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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| CDS CCA 72 bp | AGCCAGAGCGGTCAAATTTATAGAGATCCAGCAAGATaGCGCACACTTGCCACCAAGCCCGGTGACCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SQSGQIYRDPAR*RTLATKPGDLS Trigger: ACTCAGGTCACCGGGCTTGGTGGCAAGTGTGCGCCATCTTGCTGGATCTCTATAAATTTGACCGCTCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065913.8 |
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