Pregenerated sensors for ACVR2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052155Ensembl transcript IDs: ENSMUST00000063886.4
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCAGATCCATCTCCCAGATCCATGCTTTCCACAAGGGGCTGCTTaGGTACATGTCCTGGAGGCATCCTACTCATTTCACACAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: SQIHLPDPCFPQGAA*VHVLEASYSFHTEN Trigger: ATTTTCTGTGTGAAATGAGTAGGATGCCTCCAGGACATGTACGCAAGCAGCCCCTTGTGGAAAGCATGGATCTGGGAGATGGATCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR GCA 90 bp | GCAGCTTTTCCCTTAGACTCCTCTTCATATCTGTGCTGCAGACGATaGAGTAAGTTTCCCAGATCCATCTCCCAGATCCATGCTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: AAFPLDSSSYLCCRR*SKFPRSISQIHAFH Trigger: GTGGAAAGCATGGATCTGGGAGATGGATCTGGGAAACTTACTGCATCGTCTGCAGCACAGATATGAAGAGGAGTCTAAGGGAAAAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR GCA 90 bp | TTACAGTTTGCAGCTTTTCCCTTAGACTCCTCTTCATATCTGTGCTaGAGACGATGCAGTAAGTTTCCCAGATCCATCTCCCAGATCCAT | + |
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Preference number: 1 (lower is better) Translates to: LQFAAFPLDSSSYLC*RRCSKFPRSISQIH Trigger: ATGGATCTGGGAGATGGATCTGGGAAACTTACTGCATCGTCTGCAGCACAGATATGAAGAGGAGTCTAAGGGAAAAGCTGCAAACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR GCA 90 bp | TCTTTACAGTTTGCAGCTTTTCCCTTAGACTCCTCTTCATATCTGTaGTGCAGACGATGCAGTAAGTTTCCCAGATCCATCTCCCAGATC | + |
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Preference number: 1 (lower is better) Translates to: SLQFAAFPLDSSSYL*CRRCSKFPRSISQI Trigger: GATCTGGGAGATGGATCTGGGAAACTTACTGCATCGTCTGCAGCACAGATATGAAGAGGAGTCTAAGGGAAAAGCTGCAAACTGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 90 bp | GTGCAAGTTCATGGGACCAATAATTGTGAGGCACAGTCTCTGTTCTaGAATTCACAAGGTACCTGTAATAAACATCCAAACAAGAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: VQVHGTNNCEAQSLF*NSQGTCNKHPNKSH Trigger: GTGACTCTTGTTTGGATGTTTATTACAGGTACCTTGTGAATTCCAGAACAGAGACTGTGCCTCACAATTATTGGTCCCATGAACTTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 90 bp | ACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATaGCAGTTGATCATAAAGCATTTCTCACATGGGAGATTTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TSNKFKHWLLHQSVL*QLIIKHFSHGRFGQ Trigger: TTGCCCAAATCTCCCATGTGAGAAATGCTTTATGATCAACTGCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CAA 90 bp | TTCCCAGATCCATCTCCCAGATCCATGCTTTCCACAAGGGGCTGCTaGCGTACATGTCCTGGAGGCATCCTACTCATTTCACACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: FPDPSPRSMLSTRGC*RTCPGGILLISHRK Trigger: TTTTCTGTGTGAAATGAGTAGGATGCCTCCAGGACATGTACGCAAGCAGCCCCTTGTGGAAAGCATGGATCTGGGAGATGGATCTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR TCA 90 bp | GAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAATAGTGGTCCAAAAGATCCTTaGTTTGGAGAGGGCCACATT | + |
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Preference number: 2 (lower is better) Translates to: EQQHTTHSQAVSCWHYNSGPKDP*FGEGHI Trigger: AATGTGGCCCTCTCCAAATCAAGGATCTTTTGGACC...ACTATTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR GCA 90 bp | CATTCTATTCCACTAAACTACCATCTATCTGGTGAGGAGTTTGGTTTTGTTTTGCATCTCCCAGATCCATaGTTTCCACAAGGGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSIPLNYHLSGEEFGFVLHLPDP*FPQGAA Trigger: AGCAGCCCCTTGTGGAAAGCATGGATCTGGGAGATG...CAAAACAAAACCAAACTCCTCACCAGATAGATGGTAGTTTAGTGGAATAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTACTTGCGTACATGTCCTaGAGGCATCCTACTCATTTC | + |
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Preference number: 2 (lower is better) Translates to: EPVLVKFICSAFLSRTVVLAYMS*RHPTHF Trigger: GAAATGAGTAGGATGCCTCCAGGACATGTACGCAAG...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR TCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTACATCAAATATTACTCTaGCAAGATGGCACCACGCAG | + |
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Preference number: 2 (lower is better) Translates to: EPVLVKFICSAFLSRTVVHQILL*QDGTTQ Trigger: CTGCGTGGTGCCATCTTGTCAGAGTAATATTTGATG...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR GCA 90 bp | GAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAATAGTAAGTTCTTTACAGTTTaGAGCTTTTCCCTTAGACTC | + |
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Preference number: 2 (lower is better) Translates to: EQQHTTHSQAVSCWHYNSKFFTV*SFSLRL Trigger: GAGTCTAAGGGAAAAGCTGCAAACTGTAAAGAACTT...ACTATTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CAA 90 bp | TTTCAATTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTTGTaGAGGGAGGTTAAAGTAATGCTTGGAAGCCTCTTTACTGTACCC | + |
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Preference number: 2 (lower is better) Translates to: FQFYNLATVELRYTL*REVKVMLGSLFTVP Trigger: GGGTACAGTAAAGAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAATTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CCA 90 bp | GTCCCTAACTCAATCTTTTTATCTGCCCATTCTGCACTTACTGTAAACCAAACAGTTCTCTATGGTGTGTaGCATACAAACAAGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: VPNSIFLSAHSALTVNQTVLYGV*HTNKNA Trigger: AGCATTCTTGTTTGTATGCCACACACCATAGAGAAC...TGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAAAAGATTGAGTTAGGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR TCA 90 bp | CACATGCTAAAACTCCTAGCATCTAAAATACATACAAGATCTGTGCAGGGCATAGGAATTAGTGTCTTCTaGCAGACATTAAGAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: HMLKLLASKIHTRSVQGIGISVF*QTLRNL Trigger: CAGATTTCTTAATGTCTGTCAGAAGACACTAATTCC...TATGCCCTGCACAGATCTTGTATGTATTTTAGATGCTAGGAGTTTTAGCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATTATCCCCTATATCAAGAGTTTaGGGGGCCAAATATGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: VLVKFICSAFLSRTVVLSPISRV*GAKYVE Trigger: TTCTACATATTTGGCCCCTCAAACTCTTGATATAGG...GGATAATACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CAA 90 bp | TGTTTTCAATTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTAATGCTTGGAAGCCTCTTTACTGTA | + |
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Preference number: 2 (lower is better) Translates to: CFQFYNLATVELRYT*LREVKVMLGSLFTV Trigger: TACAGTAAAGAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAATTGAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR GCA 72 bp | CATCTCCCAGATCCATGCTTTCCACAAGGGGCTGCTTaGGTACATGTCCTGGAGGCATCCTACTCATTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HLPDPCFPQGAA*VHVLEASYSFH Trigger: GTGAAATGAGTAGGATGCCTCCAGGACATGTACGCAAGCAGCCCCTTGTGGAAAGCATGGATCTGGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CAA 90 bp | CACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAAAGGTCCAAAAGATCCTaGATTTGGAGAGGGCCACAT | + |
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Preference number: 3 (lower is better) Translates to: HRTAAHYTFTSCVMLALQRSKRS*IWRGPH Trigger: ATGTGGCCCTCTCCAAATCAAGGATCTTTTGGACCT...TTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 72 bp | TGGGTACAGAGACAACGCACAGTTCTCTATGGTGTGTaGCATACAAACAAGAATGCTATTATCCTCCCCACT | + |
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Preference number: 3 (lower is better) Translates to: WVQRQRTVLYGV*HTNKNAIILPT Trigger: AGTGGGGAGGATAATAGCATTCTTGTTTGTATGCCACACACCATAGAGAACTGTGCGTTGTCTCTGTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 72 bp | GGGGAGGAAGCTGGGTTGTGTTCCTTAGACCAGCACTaGTTACCTCTTAATGTCATTGCATATTATAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: GEEAGLCSLDQH*LPLNVIAYYKF Trigger: GAACTTATAATATGCAATGACATTAAGAGGTAACCAGTGCTGGTCTAAGGAACACAACCCAGCTTCCTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 72 bp | GAGACCTTGGGTACAGAGACAACGCACAGTTCTCTATaGTGTGTGGCATACAAACAAGAATGCTATTATCCT | + |
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Preference number: 3 (lower is better) Translates to: ETLGTETTHSSL*CVAYKQECYYP Trigger: AGGATAATAGCATTCTTGTTTGTATGCCACACACCATAGAGAACTGTGCGTTGTCTCTGTACCCAAGGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CCA 72 bp | CATGGGACCAATAATTGTGAGGCACAGTCTCTGTTCTaGAATTCACAAGGTACCTGTAATAAACATCCAAAC | + |
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Preference number: 3 (lower is better) Translates to: HGTNNCEAQSLF*NSQGTCNKHPN Trigger: GTTTGGATGTTTATTACAGGTACCTTGTGAATTCCAGAACAGAGACTGTGCCTCACAATTATTGGTCCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CAA 90 bp | GATAGACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATGGCCAAAAGATCCTTGATTaGGAGAGGGCCACATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: DRLQINSNTGYSISQSYGQKILD*ERATFF Trigger: GAAGAATGTGGCCCTCTCCAAATCAAGGATCTTTTG...GCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGTCTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR TCA 72 bp | AGGGGCCAAATATGTAGAAATCAAAACAATGAACACTaGACTTGGCAACCTTACGAATACAGTGAGACCTTG | + |
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Preference number: 3 (lower is better) Translates to: RGQICRNQNNEH*TWQPYEYSETL Trigger: CAAGGTCTCACTGTATTCGTAAGGTTGCCAAGTTCAGTGTTCATTGTTTTGATTTCTACATATTTGGCCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CAA 90 bp | CACATGCTAAAACTCCTAGCATCTAAAATACATACAAGATCTGTGCAGGGCATAACCTATATCAAGAGTTaGAGGGGCCAAATATGTAGA | + |
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Preference number: 3 (lower is better) Translates to: HMLKLLASKIHTRSVQGITYIKS*RGQICR Trigger: TCTACATATTTGGCCCCTCAAACTCTTGATATAGGT...TATGCCCTGCACAGATCTTGTATGTATTTTAGATGCTAGGAGTTTTAGCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATTATCCTTACTGTACCCCACTTaGATGACTATGTACACAGAA | + |
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Preference number: 3 (lower is better) Translates to: VLVKFICSAFLSRTVVLSLLYPT*MTMYTE Trigger: TTCTGTGTACATAGTCATCAAAGTGGGGTACAGTAA...GGATAATACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| 3UTR CAA 72 bp | CCATCTCCCAGATCCATGCTTTCCACAAGGGGCTGCTaGCGTACATGTCCTGGAGGCATCCTACTCATTTCA | + |
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Preference number: 4 (lower is better) Translates to: PSPRSMLSTRGC*RTCPGGILLIS Trigger: TGAAATGAGTAGGATGCCTCCAGGACATGTACGCAAGCAGCCCCTTGTGGAAAGCATGGATCTGGGAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR CCA 90 bp | GCAGACGATGCAGTAAGTTTCCCAGATCCATCTCCCAGATCCATGCTTTCCACAACCCTCCAACACCTCTaGAGCCATATACCTCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: ADDAVSFPDPSPRSMLSTTLQHL*SHIPPG Trigger: ACCCGGAGGTATATGGCTCCAGAGGTGTTGGAGGGT...TGTGGAAAGCATGGATCTGGGAGATGGATCTGGGAAACTTACTGCATCGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR CCA 90 bp | TTTCCCTTAGACTCCTCTTCATATCTGTGCTGCAGACGATGCAGTAAGTTTCCCGTACCAACCTGCCCATaGGTGTCACCTGCAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: FPLDSSSYLCCRRCSKFPVPTCP*VSPADL Trigger: CAAGTCTGCAGGTGACACCCATGGGCAGGTTGGTAC...GGGAAACTTACTGCATCGTCTGCAGCACAGATATGAAGAGGAGTCTAAGGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | CACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAAGTCCATCTGCAGCAGTaGAACGAGAAGCCAATTCCC | + |
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Preference number: 4 (lower is better) Translates to: HRTAAHYTFTSCVMLALQVHLQQ*NEKPIP Trigger: GGGAATTGGCTTCTCGTTGCACTGCTGCAGATGGAC...TTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | CTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCACACTCCTGAGTTTCTaGTCTGCCAAGTATAGCACC | + |
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Preference number: 4 (lower is better) Translates to: LCTQNSSTLHIHKLCHVGTLLSF*SAKYST Trigger: GGTGCTATACTTGGCAGATCAGAAACTCAGGAGTGT...GCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | TTTCCCTTAGACTCCTCTTCATATCTGTGCTGCAGACGATGCAGTAAGTTTCCCTTGAAGTGGGCTGTGTaGCTTCCATCTCCGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: FPLDSSSYLCCRRCSKFPLKWAV*LPSPEN Trigger: ATTTTCCGGAGATGGAAGTCACACAGCCCACTTCAA...GGGAAACTTACTGCATCGTCTGCAGCACAGATATGAAGAGGAGTCTAAGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCCACATTCTTCGAGTACATTTCAGCCACATATTCATTaGGCAACTGGGCTTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ARSKRSLIWRGPHSSSTFQPHIH*ATGLSR Trigger: TCTGGAAAGCCCAGTTGCTCAATGAATATGTGGCTG...AAATGTACTCGAAGAATGTGGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTACCCATGGGTGTCACCTaGAGACTTGCCAGCCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVPMGVT*RLASLE Trigger: TTCGAGGCTGGCAAGTCTGCAGGTGACACCCATGGG...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR CCA 90 bp | CAACTAAGCACTTTCCTTAGCTTAGCAGCTCCAGTTCAGAGTCCCAGTCCTCAGTATTCATTGAGCAACTaGGCTTTCCAGACACAACCA | + |
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Preference number: 4 (lower is better) Translates to: QLSTFLSLAAPVQSPSPQYSLSN*AFQTQP Trigger: TGGTTGTGTCTGGAAAGCCCAGTTGCTCAATGAATA...CTGAGGACTGGGACTCTGAACTGGAGCTGCTAAGCTAAGGAAAGTGCTTAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | CTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCTCCTGTCATAGCAGTTaGTATCATCCAGCCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: LCTQNSSTLHIHKLCHVGSCHSS*YHPANN Trigger: GTTGTTGGCTGGATGATATCAACTGCTATGACAGGA...GCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | CTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCAGTGAGCCCTTTTCATaGAATGCTGTGATTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LCTQNSSTLHIHKLCHVGSEPFS*NAVISH Trigger: GTGGCTAATCACAGCATTTCATGAAAAGGGCTCACT...GCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | GTCCCTAACTCAATCTTTTTATCTGCCCATTCTGCACTTACTGTAAACCAAACAGGTGGTCCTGGGTCTTaGGTAGGAACAAGTACAGGA | + |
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Preference number: 4 (lower is better) Translates to: VPNSIFLSAHSALTVNQTGGPGS*VGTSTG Trigger: TCCTGTACTTGTTCCTACTCAAGACCCAGGACCACC...TGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAAAAGATTGAGTTAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTAATCTACGGGTCCATCTaGAGCAGTGCAACGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVIYGSI*SSATRS Trigger: GCTTCTCGTTGCACTGCTGCAGATGGACCCGTAGAT...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR CCA 90 bp | TTTGATGACTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCGGTTCAACACCAGTCTaGTTGGTTCTGTCTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FDDYVHRTAAHYTFTSCVGSTPV*LVLSLS Trigger: GGAAAGAGACAGAACCAACCAGACTGGTGTTGAACC...GACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAGTCATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR CCA 90 bp | GAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAATAGTATCCAGCTGATAACCTaGCTTCTGCATCATGATCCC | + |
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Preference number: 4 (lower is better) Translates to: EQQHTTHSQAVSCWHYNSIQLIT*LLHHDP Trigger: GGGATCATGATGCAGAAGCCAGGTTATCAGCTGGAT...ACTATTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTACGGTGTAACAGGATTTaGAGTGGGCTGTGTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVRCNRI*SGLCDF Trigger: GAAGTCACACAGCCCACTTCAAATCCTGTTACACCG...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR TCA 90 bp | GAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAATAGTCTGGCTTCTGCATCATaGTCCCAACATTCTTCTATC | + |
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Preference number: 4 (lower is better) Translates to: EQQHTTHSQAVSCWHYNSLASAS*SQHSSI Trigger: GATAGAAGAATGTTGGGATCATGATGCAGAAGCCAG...ACTATTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTAGTCCCTGTGAGAGATTaGAGGCTTGTGGCCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVVPVRD*RLVAIF Trigger: AAAGATGGCCACAAGCCTGCAATCTCTCACAGGGAC...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | GTCCCTAACTCAATCTTTTTATCTGCCCATTCTGCACTTACTGTAAACCAAACATGTCACCTGCAGACTTaGCAGCCTCGAACTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: VPNSIFLSAHSALTVNQTCHLQT*QPRTLR Trigger: CCTTAAAGTTCGAGGCTGGCAAGTCTGCAGGTGACA...TGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAAAAGATTGAGTTAGGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS-3UTR GCA 90 bp | CTCTGGTACCTACATGCCATCAATTCCACTTTCTTCGTAAGGATAAGGCATGAACGTTTCACAGAGCATTaGCATTCCTGCATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWYLHAINSTFFVRIRHERFTEH*HSCMFL Trigger: CAGAAACATGCAGGAATGGCAATGCTCTGTGAAACG...TTCATGCCTTATCCTTACGAAGAAAGTGGAATTGATGGCATGTAGGTACCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | TTTGATGACTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCGCCAAGTATAGCACCTaGAGAGCAAGAGATAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FDDYVHRTAAHYTFTSCVAKYST*RARDKK Trigger: TTTCTTATCTCTTGCTCTTCAGGTGCTATACTTGGC...GACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAGTCATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATTATCCCTTTTGATGTCCCTGTaGGAGATTGCAGGCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLVKFICSAFLSRTVVLSLLMSL*EIAGLW Trigger: CCACAAGCCTGCAATCTCTCACAGGGACATCAAAAG...GGATAATACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CCA 90 bp | CACATGCTAAAACTCCTAGCATCTAAAATACATACAAGATCTGTGCAGGGCATAGAGATTGCAGGCTTGTaGCCATCTTTTAAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMLKLLASKIHTRSVQGIEIAGL*PSFKPG Trigger: ACCTGGCTTAAAAGATGGCCACAAGCCTGCAATCTC...TATGCCCTGCACAGATCTTGTATGTATTTTAGATGCTAGGAGTTTTAGCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | CTCTGGTACCTACATGCCATCAATTCCACTTTCTTCGTAAGGATAAGGCATGAAACTTCATATTCATTCTaGCAGGACTGTTTGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWYLHAINSTFFVRIRHETSYSF*QDCLSC Trigger: ACAGGACAAACAGTCCTGGCAGAATGAATATGAAGT...TTCATGCCTTATCCTTACGAAGAAAGTGGAATTGATGGCATGTAGGTACCAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | TTTGATGACTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCACCCAAAGTCAGCAATaGAAGCTGTCAGATTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FDDYVHRTAAHYTFTSCVTQSQQ*KLSDCF Trigger: AAAACAATCTGACAGCTTGCATTGCTGACTTTGGGT...GACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAGTCATCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTACCTACATGCCATCAATTCCACTTTCTTCGTAAGGATAAGGCATGAAAATGTTGTAATAGGGTaGCTTCGGTGTAACAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LWYLHAINSTFFVRIRHENVVIG*LRCNRI Trigger: AATCCTGTTACACCGAAGCCACCCTATTACAACATT...TTCATGCCTTATCCTTACGAAGAAAGTGGAATTGATGGCATGTAGGTACCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTAAGAAATGCGTCCCTTTaGAAGTTTATAGCACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVRNASL*KFIAPS Trigger: GGAGGGTGCTATAAACTTCCAAAGGGACGCATTTCT...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | GATAGACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATGGCAAGAAAAGACACTCCTaGGTTTCTGATCTGCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRLQINSNTGYSISQSYGKKRHS*VSDLPS Trigger: ACTTGGCAGATCAGAAACTCAGGAGTGTCTTTTCTT...GCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGTCTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTACCTACATGCCATCAATTCCACTTTCTTCGTAAGGATAAGGCATGAATTTTCTCTGCACCAATaGACTGTAGTATGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWYLHAINSTFFVRIRHEFSLHQ*TVVCSH Trigger: ATGAGAACATACTACAGTTCATTGGTGCAGAGAAAA...TTCATGCCTTATCCTTACGAAGAAAGTGGAATTGATGGCATGTAGGTACCAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | TTTATCTGCCCATTCTGCACTTACTGTAAACCAAACACTAAAATGCCCTGCAAATTCACTTCTAACAGCTaGAATGGCTTCAACCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FICPFCTYCKPNTKMPCKFTSNS*NGFNPS Trigger: ACTAGGGTTGAAGCCATTGCAGCTGTTAGAAGTGAA...TTTGCAGGGCATTTTAGTGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | CACATGCTAAAACTCCTAGCATCTAAAATACATACAAGATCTGTGCAGGGCATATCTTCAAGAGATGGATaGTGGCCAATTTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMLKLLASKIHTRSVQGISSRDG*WPISSS Trigger: TGAGGAAGAAATTGGCCAGCATCCATCTCTTGAAGA...TATGCCCTGCACAGATCTTGTATGTATTTTAGATGCTAGGAGTTTTAGCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | GATAGACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATGGCGAGCATTGCCATTCCTaGATGTTTCTGCCAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: DRLQINSNTGYSISQSYGEHCHS*MFLPII Trigger: GATTATTGGCAGAAACATGCAGGAATGGCAATGCTC...GCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGTCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| 3UTR CAA 72 bp | AAATACTTGATTAGCCAGGTCCAAAAGATCCTTGATTaGGAGAGGGCCACATTCTTCGAGTACATTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYLISQVQKILD*ERATFFEYIFR Trigger: TCTGAAAATGTACTCGAAGAATGTGGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGCTAATCAAGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| 3UTR CAA 72 bp | TTTTATAATTTAGCAACCGTGGAACTGAGGTATACCTaGTTGAGGGAGGTTAAAGTAATGCTTGGAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYNLATVELRYT*LREVKVMLGSL Trigger: GAGGCTTCCAAGCATTACTTTAACCTCCCTCAACAAGGTATACCTCAGTTCCACGGTTGCTAAATTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | CATTCTATTCCACTAAACTACCATCTATCTGGTGAGGAGTTTGGTTTTGTTTTGTTTCATGAAATGCTGTaGTTAGCCACAGGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HSIPLNYHLSGEEFGFVLFHEML*LATGPH Trigger: ATGTGGACCTGTGGCTAATCACAGCATTTCATGAAA...CAAAACAAAACCAAACTCCTCACCAGATAGATGGTAGTTTAGTGGAATAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTAGCACATTTTTACTTTTaGTGTCCCTGTGAGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVAHFYF*CPCERL Trigger: CAATCTCTCACAGGGACATCAAAAGTAAAAATGTGC...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | CATTCTATTCCACTAAACTACCATCTATCTGGTGAGGAGTTTGGTTTTGTTTTGCATTTGTCACCATTGTaGCCACTGTTACAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSIPLNYHLSGEEFGFVLHLSPL*PLLQCP Trigger: AGGACATTGTAACAGTGGTCACAATGGTGACAAATG...CAAAACAAAACCAAACTCCTCACCAGATAGATGGTAGTTTAGTGGAATAGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATGCACAACAACTTCCTaGATATCTTCAAGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVCTTTS*ISSRDG Trigger: TCCATCTCTTGAAGATATGCAGGAAGTTGTTGTGCA...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CCA 90 bp | GAACCAGTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTAATAGGACTAATCCCATaGCGTACATATCTATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPVLVKFICSAFLSRTVVIGLIP*RTYLSS Trigger: TGAGGATAGATATGTACGCCATGGGATTAGTCCTAT...TACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGACTGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | TTTATCTGCCCATTCTGCACTTACTGTAAACCAAACACTAAAATGCCCTGCAAAATGGTTTCTGCAATATaGCAAAGTTCATTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FICPFCTYCKPNTKMPCKMVSAI*QSSFQE Trigger: CTCTTGGAATGAACTTTGTCATATTGCAGAAACCAT...TTTGCAGGGCATTTTAGTGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | CATTCTATTCCACTAAACTACCATCTATCTGGTGAGGAGTTTGGTTTTGTTTTGTCCAGCCAACAACCTTaGTTCACTATTTCAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSIPLNYHLSGEEFGFVLSSQQP*FTISME Trigger: TTCCATTGAAATAGTGAAGCAAGGTTGTTGGCTGGA...CAAAACAAAACCAAACTCCTCACCAGATAGATGGTAGTTTAGTGGAATAGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | GATAGACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATGGCATCTATCCTCAGAAATaGGTCCCTTTGGAAGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: DRLQINSNTGYSISQSYGIYPQK*VPLEVY Trigger: ATAAACTTCCAAAGGGACGCATTTCTGAGGATAGAT...GCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGTCTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CCA 90 bp | GATAGACTTCAAATAAATTCAAACACTGGTTACTCCATCAGTCAGTCCTATGGCCTGTTTGTCCTGTATTaGAAATATTTTGACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRLQINSNTGYSISQSYGLFVLY*KYFDSH Trigger: GTGGCTGTCAAAATATTTCCAATACAGGACAAACAG...GCCATAGGACTGACTGATGGAGTAACCAGTGTTTGAATTTATTTGAAGTCTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR TCA 90 bp | CATTCTATTCCACTAAACTACCATCTATCTGGTGAGGAGTTTGGTTTTGTTTTGGTTAGTCTTTGCATCTaGGTAATTCTTTCACCTACA | + |
|
Preference number: 4 (lower is better) Translates to: HSIPLNYHLSGEEFGFVLVSLCI*VILSPT Trigger: TGTAGGTGAAAGAATTACTCAGATGCAAAGACTAAC...CAAAACAAAACCAAACTCCTCACCAGATAGATGGTAGTTTAGTGGAATAGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATTATCCTGTAGTATGTTCTCATaGTTCATTCCAGGTAGACTA | + |
|
Preference number: 4 (lower is better) Translates to: VLVKFICSAFLSRTVVLSCSMFS*FIPGRL Trigger: TAGTCTACCTGGAATGAAGCATGAGAACATACTACA...GGATAATACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR GCA 90 bp | TTTATCTGCCCATTCTGCACTTACTGTAAACCAAACACTAAAATGCCCTGCAAATCTAGCCATGGTTTCTaGAATATGACAAAGTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FICPFCTYCKPNTKMPCKSSHGF*NMTKFI Trigger: AATGAACTTTGTCATATTGCAGAAACCATGGCTAGA...TTTGCAGGGCATTTTAGTGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| 3UTR CAA 72 bp | TTAGCTTACAAGTGCAAGCAAACCTATATCAAGAGTTaGAGGGGCCAAATATGTAGAAATCAAAACAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LAYKCKQTYIKS*RGQICRNQNNE Trigger: TTCATTGTTTTGATTTCTACATATTTGGCCCCTCAAACTCTTGATATAGGTTTGCTTGCACTTGTAAGCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CCA 90 bp | CAGAAATGCGTCCCTTTGGAAGTTTATAGCACCCTCCAACACCTCTaGAGCCATATACCTCCGGGTACCAACCTGCCCATGGGTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QKCVPLEVYSTLQHL*SHIPPGTNLPMGVT Trigger: GGTGACACCCATGGGCAGGTTGGTACCCGGAGGTATATGGCTCCAGAGGTGTTGGAGGGTGCTATAAACTTCCAAAGGGACGCATTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS TCA 90 bp | GCCACAGGTCCACATCCACACTGGTGCCTCTTTTCTCTGCACCAATaGACTGTAGTATGTTCTCATGCTTCATTCCAGGTAGACTATAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATGPHPHWCLFSLHQ*TVVCSHASFQVDYR Trigger: TCTATAGTCTACCTGGAATGAAGCATGAGAACATACTACAGTTCATTGGTGCAGAGAAAAGAGGCACCAGTGTGGATGTGGACCTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CCA 90 bp | ACTAATCCCATGGCGTACATATCTATCCTCAGAAATGCGTCCCTTTaGAAGTTTATAGCACCCTCCAACACCTCTGGAGCCATATACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TNPMAYISILRNASL*KFIAPSNTSGAIYL Trigger: GAGGTATATGGCTCCAGAGGTGTTGGAGGGTGCTATAAACTTCCAAAGGGACGCATTTCTGAGGATAGATATGTACGCCATGGGATTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CCA 90 bp | CTGCAGCAGTGCAACGAGAAGCCAATTCCCATAGGACTAATCCCATaGCGTACATATCTATCCTCAGAAATGCGTCCCTTTGGAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LQQCNEKPIPIGLIP*RTYLSSEMRPFGSL Trigger: TAAACTTCCAAAGGGACGCATTTCTGAGGATAGATATGTACGCCATGGGATTAGTCCTATGGGAATTGGCTTCTCGTTGCACTGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | TTTGATGACTATGTACACAGAACAGCAGCACACTACACATTCACAAGCTGTGTCTCAACACCAGTCTGGTaGGTTCTGTCTCTTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FDDYVHRTAAHYTFTSCVSTPVW*VLSLSQ Trigger: TTGGGAAAGAGACAGAACCAACCAGACTGGTGTTGA...GACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTCTGTGTACATAGTCATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | GCCAGGTCCAAAAGATCCTTGATTTGGAGAGGGCCACATTCTTCGAGTACATTTAACCAAATCTTCCCCTaGCTTTCACTTCTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARSKRSLIWRGPHSSSTFNQIFP*LSLLTA Trigger: AGCTGTTAGAAGTGAAAGCAAGGGGAAGATTTGGTT...AAATGTACTCGAAGAATGTGGCCCTCTCCAAATCAAGGATCTTTTGGACCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGGTACCTACATGCCATCAATTCCACTTTCTTCGTAAGGATAAGGCATGAAACAGCCACATATTCATaGAGCAACTGGGCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LWYLHAINSTFFVRIRHETATYS*SNWAFQ Trigger: CTGGAAAGCCCAGTTGCTCAATGAATATGTGGCTGT...TTCATGCCTTATCCTTACGAAGAAAGTGGAATTGATGGCATGTAGGTACCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | GAACAGCAGCACACTACACATTCACAAGCTGTGTCATGTTGGCATTACAATAGTATCCAGCCAACAACCTaGCTTCACTATTTCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: EQQHTTHSQAVSCWHYNSIQPTT*LHYFNG Trigger: TCCATTGAAATAGTGAAGCAAGGTTGTTGGCTGGAT...ACTATTGTAATGCCAACATGACACAGCTTGTGAATGTGTAGTGTGCTGCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | CACATGCTAAAACTCCTAGCATCTAAAATACATACAAGATCTGTGCAGGGCATACAGAAATGCGTCCCTTaGGAAGTTTATAGCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HMLKLLASKIHTRSVQGIQKCVP*EVYSTL Trigger: GAGGGTGCTATAAACTTCCAAAGGGACGCATTTCTG...TATGCCCTGCACAGATCTTGTATGTATTTTAGATGCTAGGAGTTTTAGCATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS TCA 90 bp | TTGGTTCTGTCTCTTTCCCAATTAGCATTAAAGAAAAGACACTCCTaGGTTTCTGATCTGCCAAGTATAGCACCTGAAGAGCAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LVLSLSQLALKKRHS*VSDLPSIAPEEQEI Trigger: TATCTCTTGCTCTTCAGGTGCTATACTTGGCAGATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGGGAAAGAGACAGAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | GTCTTGGTAAAATTTATCTGTAGTGCTTTCTTAAGCCGAACAGTCGTATTATCCTCGTTTCACAGAGCATaGCCATTCCTGCATGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLVKFICSAFLSRTVVLSSFHRA*PFLHVS Trigger: AGAAACATGCAGGAATGGCAATGCTCTGTGAAACGA...GGATAATACGACTGTTCGGCTTAAGAAAGCACTACAGATAAATTTTACCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS TCA 90 bp | TCCTCATGTAAATATGCCAATCCTCTAGCCATGGTTTCTGCAATATaGCAAAGTTCATTCCAAGAGACCACATTAGCCTTAAGAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSCKYANPLAMVSAI*QSSFQETTLALRKS Trigger: AGACTTTCTTAAGGCTAATGTGGTCTCTTGGAATGAACTTTGTCATATTGCAGAAACCATGGCTAGAGGATTGGCATATTTACATGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS-3UTR CAA 90 bp | TTTATCTGCCCATTCTGCACTTACTGTAAACCAAACACTAAAATGCCCTGCAAACATAGACTAGATTCTTaGGGAGGAAAGTCAACATTT | + |
|
Preference number: 5 (lower is better) Translates to: FICPFCTYCKPNTKMPCKHRLDS*GGKSTF Trigger: AAATGTTGACTTTCCTCCCAAAGAATCTAGTCTATG...TTTGCAGGGCATTTTAGTGTTTGGTTTACAGTAAGTGCAGAATGGGCAGATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CAA 72 bp | CGGGTACCAACCTGCCCATGGGTGTCACCTGCAGACTaGCCAGCCTCGAACTTTAAGGCCAACCCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVPTCPWVSPAD*PASNFKANPKS Trigger: TGACTTTGGGTTGGCCTTAAAGTTCGAGGCTGGCAAGTCTGCAGGTGACACCCATGGGCAGGTTGGTACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CAA 90 bp | ATATACCTCCGGGTACCAACCTGCCCATGGGTGTCACCTGCAGACTaGCCAGCCTCGAACTTTAAGGCCAACCCAAAGTCAGCAATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: IYLRVPTCPWVSPAD*PASNFKANPKSAMQ Trigger: TTGCATTGCTGACTTTGGGTTGGCCTTAAAGTTCGAGGCTGGCAAGTCTGCAGGTGACACCCATGGGCAGGTTGGTACCCGGAGGTATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS GCA 72 bp | CAACCAAATCTTCCCCTTGCTTTCACTTCTAACAGCTaGAATGGCTTCAACCCTAGTAATGGGGAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPNLPLAFTSNS*NGFNPSNGEGG Trigger: CCCACCTTCCCCATTACTAGGGTTGAAGCCATTGCAGCTGTTAGAAGTGAAAGCAAGGGGAAGATTTGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS GCA 72 bp | GTAACATGTACTCATCTACGGGTCCATCTGCAGCAGTaGAACGAGAAGCCAATTCCCATAGGACTAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTCTHLRVHLQQ*NEKPIPIGLIP Trigger: TGGGATTAGTCCTATGGGAATTGGCTTCTCGTTGCACTGCTGCAGATGGACCCGTAGATGAGTACATGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
||
| CDS CCA 72 bp | ATGGCGTACATATCTATCCTCAGAAATGCGTCCCTTTaGAAGTTTATAGCACCCTCCAACACCTCTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MAYISILRNASL*KFIAPSNTSGA Trigger: GGCTCCAGAGGTGTTGGAGGGTGCTATAAACTTCCAAAGGGACGCATTTCTGAGGATAGATATGTACGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS CCA 72 bp | TGCAACGAGAAGCCAATTCCCATAGGACTAATCCCATaGCGTACATATCTATCCTCAGAAATGCGTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CNEKPIPIGLIP*RTYLSSEMRPF Trigger: AAAGGGACGCATTTCTGAGGATAGATATGTACGCCATGGGATTAGTCCTATGGGAATTGGCTTCTCGTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS CAA 72 bp | TTCTGCCAGGACTGTTTGTCCTGTATTGGAAATATTTaGACAGCCACATATTCATTGAGCAACTGGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FCQDCLSCIGNI*TATYSLSNWAF Trigger: GAAAGCCCAGTTGCTCAATGAATATGTGGCTGTCAAAATATTTCCAATACAGGACAAACAGTCCTGGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS CAA 90 bp | ACAATCAGTCCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGCTTCACTATTTCAATGGAACCAGAAATATTCTTCCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: TISPVIAVDIIQPTT*LHYFNGTRNILPGS Trigger: GCTACCTGGAAGAATATTTCTGGTTCCATTGAAATAGTGAAGCAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGGACTGATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS TCA 72 bp | TCTCTTTCCCAATTAGCATTAAAGAAAAGACACTCCTaGGTTTCTGATCTGCCAAGTATAGCACCTGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SLSQLALKKRHS*VSDLPSIAPEE Trigger: CTCTTCAGGTGCTATACTTGGCAGATCAGAAACTCAGGAGTGTCTTTTCTTTAATGCTAATTGGGAAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS TCA 72 bp | AAATATGCCAATCCTCTAGCCATGGTTTCTGCAATATaGCAAAGTTCATTCCAAGAGACCACATTAGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: KYANPLAMVSAI*QSSFQETTLAL Trigger: TAAGGCTAATGTGGTCTCTTGGAATGAACTTTGTCATATTGCAGAAACCATGGCTAGAGGATTGGCATATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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| CDS CAA 72 bp | CCTGTCATAGCAGTTGATATCATCCAGCCAACAACCTaGCTTCACTATTTCAATGGAACCAGAAATATTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVIAVDIIQPTT*LHYFNGTRNIL Trigger: AAGAATATTTCTGGTTCCATTGAAATAGTGAAGCAAGGTTGTTGGCTGGATGATATCAACTGCTATGACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063886.4 |
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