Pregenerated sensors for ACVR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000532Ensembl transcript IDs: ENSMUST00000000544.12
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTATaGGGGCCGCTCCTGGGCGAGCCCAGCACCCTTCACCGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TGPWRKTCSPVDHKV*GPLLGEPSTLHRSW Trigger: CCAGGAGCGGTGAAGGGTGCTGGGCTCGCCCAGGAGCGGCCCCCATACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GTATGGGGGCCGCTCCTGGGCGAGCCCAGCACCCTTCACCGCTCCTaGCAACACGCCAGATGCACTGGGCTCTCTGTACTTCCCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: VWGPLLGEPSTLHRS*QHARCTGLSVLPTA Trigger: TGCAGTGGGAAGTACAGAGAGCCCAGTGCATCTGGCGTGTTGCCAGGAGCGGTGAAGGGTGCTGGGCTCGCCCAGGAGCGGCCCCCATAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GGAAAACCTGCAGCCCAGTGGACCACAAGGTATGGGGGCCGCTCCTaGGCGAGCCCAGCACCCTTCACCGCTCCTGGCAACACGCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: GKPAAQWTTRYGGRS*ASPAPFTAPGNTPD Trigger: ATCTGGCGTGTTGCCAGGAGCGGTGAAGGGTGCTGGGCTCGCCCAGGAGCGGCCCCCATACCTTGTGGTCCACTGGGCTGCAGGTTTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | GATCCTCCCGGGCCAGCGCTCAGCAGGCTCGCAGCCCACATTTGCTaGGCAAGTATCTGGAAAGGGTCCAACCAGCCGGGCAATGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: DPPGPALSRLAAHIC*ASIWKGSNQPGNVQ Trigger: CTGCACATTGCCCGGCTGGTTGGACCCTTTCCAGATACTTGCTCAGCAAATGTGGGCTGCGAGCCTGCTGAGCGCTGGCCCGGGAGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | GCGCACAGGTCTCCTGGGAGTTGTCCAGTGGCGTGGGGGTCACTGTaGGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: AHRSPGSCPVAWGSL*GCCWQVQRQRGLYS Trigger: ACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCACAGTGACCCCCACGCCACTGGACAACTCCCAGGAGACCTGTGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GACCAGGCACAATGTGGGACACACCTCGGCACATGCGCACTTGGCTaGACAGACAGGCAGCAGGTTGTGTCTCTAGGGGCAGTCCCTCCG | + |
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Preference number: 1 (lower is better) Translates to: DQAQCGTHLGTCALG*TDRQQVVSLGAVPP Trigger: CGGAGGGACTGCCCCTAGAGACACAACCTGCTGCCTGTCTGTCCAGCCAAGTGCGCATGTGCCGAGGTGTGTCCCACATTGTGCCTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 90 bp | CGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCGGGTaGCCCGTGGATCAGGGTGGCCTCAGGGAGCCAAAGCACAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: RALDLVCESRTQRCG*PVDQGGLREPKHSF Trigger: GAAGCTGTGCTTTGGCTCCCTGAGGCCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | CACAGACCAGGCACAATGTGGGACACACCTCGGCACATGCGCACTTaGCTGGACAGACAGGCAGCAGGTTGTGTCTCTAGGGGCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: HRPGTMWDTPRHMRT*LDRQAAGCVSRGSP Trigger: GGGACTGCCCCTAGAGACACAACCTGCTGCCTGTCTGTCCAGCCAAGTGCGCATGTGCCGAGGTGTGTCCCACATTGTGCCTGGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | GCCTTGACGGCAACTCAGGAACGAACGGGCTTTAGACTTGGTCTGTaGATCCAGAACGCAGAGGTGCGGGTGCCCCGTGGATCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: ALTATQERTGFRLGL*IQNAEVRVPRGSGW Trigger: CCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAGTTGCCGTCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 90 bp | CTGGGCGAGCCCAGCACCCTTCACCGCTCCTGGCAACACGCCAGATaGACTGGGCTCTCTGTACTTCCCACTGCAAGCAGTTTGAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LGEPSTLHRSWQHAR*TGLSVLPTASSLSC Trigger: ACAACTCAAACTGCTTGCAGTGGGAAGTACAGAGAGCCCAGTGCATCTGGCGTGTTGCCAGGAGCGGTGAAGGGTGCTGGGCTCGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 90 bp | AACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTaGGGGTGCCCCGTGGATCAGGGTGGCCTCAGGGAGCCAAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: NERALDLVCESRTQR*GCPVDQGGLREPKH Trigger: GTGCTTTGGCTCCCTGAGGCCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 90 bp | CGGGCAGAAACAAGAGGTAGGCCTCCACGACGCTTGCACGGTGGCTaGAGTCATCCTCACTGCCCAGGTTCTTTGTGTAGGCAGAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: RAETRGRPPRRLHGG*SHPHCPGSLCRQRN Trigger: GTTCCTCTGCCTACACAAAGAACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCTACCTCTTGTTTCTGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | CGAGCCCAGCACCCTTCACCGCTCCTGGCAACACGCCAGATGCACTaGGCTCTCTGTACTTCCCACTGCAAGCAGTTTGAGTTGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: RAQHPSPLLATRQMH*ALCTSHCKQFELWH Trigger: ATGCCACAACTCAAACTGCTTGCAGTGGGAAGTACAGAGAGCCCAGTGCATCTGGCGTGTTGCCAGGAGCGGTGAAGGGTGCTGGGCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 90 bp | CAAGGCAGGAGAAGCTGGAGGAGACAGTTTCCCTGCAAAGACTCATaGCTCCCCTGGCAGGAAAGGCTCACAATGAACCCAGTCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: QGRRSWRRQFPCKDS*LPWQERLTMNPVSR Trigger: CCTGGAGACTGGGTTCATTGTGAGCCTTTCCTGCCAGGGGAGGCATGAGTCTTTGCAGGGAAACTGTCTCCTCCAGCTTCTCCTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | AGAAGCTGGAGGAGACAGTTTCCCTGCAAAGACTCATGCCTCCCCTaGCAGGAAAGGCTCACAATGAACCCAGTCTCCAGGACCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: RSWRRQFPCKDSCLP*QERLTMNPVSRTHC Trigger: GCAGTGGGTCCTGGAGACTGGGTTCATTGTGAGCCTTTCCTGCCAGGGGAGGCATGAGTCTTTGCAGGGAAACTGTCTCCTCCAGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GGGAGGTCAGCAGGGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTaGGACTCAAGGGACACTGTTCAATGGCCAGTAAATTGGCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GRSAGVGKEVPQRHS*DSRDTVQWPVNWPK Trigger: CTTGGGCCAATTTACTGGCCATTGAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCCCTGCTGACCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | AGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTaGTCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SRDPEVDASLASSLP*SENPVQEAHADASL Trigger: GAGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GGGAGGAAACTTCCGGTTCCTCTCAATATCTTGATGCCAGTTGACTaGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTATG | + |
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Preference number: 1 (lower is better) Translates to: GRKLPVPLNILMPVD*SLEENLQPSGPQGM Trigger: CATACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCATCAAGATATTGAGAGGAACCGGAAGTTTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | AACTACATGCTGCTCACTGAGAAGCAGCAGCACTCAGAGACAGTATaGCCACCACACCCTGGCCTACACATGCACAGAAAGCTCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: NYMLLTEKQQHSETV*PPHPGLHMHRKLKQ Trigger: CTGCTTGAGCTTTCTGTGCATGTGTAGGCCAGGGTGTGGTGGCCATACTGTCTCTGAGTGCTGCTGCTTCTCAGTGAGCAGCATGTAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | ATATTCAGCTCGGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTaGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAG | + |
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Preference number: 1 (lower is better) Translates to: IFSSDRSLSSVGTLK*MQALPLLYPDQRIQ Trigger: CTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCCGAGCTGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | CTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCATaGCTGATGCTGAAACACAGCACCCAAGACTTCCACCTACATTCT | + |
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Preference number: 1 (lower is better) Translates to: LTAVKEDALGLAHFP*LMLKHSTQDFHLHS Trigger: AGAATGTAGGTGGAAGTCTTGGGTGCTGTGTTTCAGCATCAGCCATGGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GGGCTTCTCTTCCCAAGGGGATACAGGTCCCCCTTCCAGTTTCAGTaGTCTTTAAGAACAGTGATCCTAGCTCATCAAGGCTCTCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GLLFPRGYRSPFQFQ*SLRTVILAHQGSQD Trigger: GTCCTGAGAGCCTTGATGAGCTAGGATCACTGTTCTTAAAGACCACTGAAACTGGAAGGGGGACCTGTATCCCCTTGGGAAGAGAAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | TTGCAGAATCTGGGGTGGGACATAAACAGATGTTACATTCCAATCTaGGTCCCAAGCTCTGGCTTCGGATTCCTCGGCCCTTCCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: LQNLGWDINRCYIPI*VPSSGFGFLGPSSQ Trigger: CTGTGAGGAAGGGCCGAGGAATCCGAAGCCAGAGCTTGGGACTCAGATTGGAATGTAACATCTGTTTATGTCCCACCCCAGATTCTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | ACGCCAGATGCACTGGGCTCTCTGTACTTCCCACTGCAAGCAGTTTaGGTTGTGGCATTGAGTTGTCTACATGATTTGCTCAGAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: TPDALGSLYFPLQAV*VVALSCLHDLLRVS Trigger: GGAGACTCTGAGCAAATCATGTAGACAACTCAATGCCACAACTCAAACTGCTTGCAGTGGGAAGTACAGAGAGCCCAGTGCATCTGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | GTGGGACATAAACAGATGTTACATTCCAATCTGAGTCCCAAGCTCTaGCTTCGGATTCCTCGGCCCTTCCTCACAGCTGTCAAGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: VGHKQMLHSNLSPKL*LRIPRPFLTAVKED Trigger: ATCTTCCTTGACAGCTGTGAGGAAGGGCCGAGGAATCCGAAGCCAGAGCTTGGGACTCAGATTGGAATGTAACATCTGTTTATGTCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR TCA 90 bp | CTGCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTaGCTGAACTATGTGCGTTTGAGTCTGGAGAATTTTTGTGTTTTG | + |
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Preference number: 1 (lower is better) Translates to: LLSGIRLRCKDKRFQ*LNYVRLSLENFCVL Trigger: CAAAACACAAAAATTCTCCAGACTCAAACGCACATAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 90 bp | AGACACAGTTGGGACTCAAGGGACACTGTTCAATGGCCAGTAAATTaGCCCAAGGAATTAAAGGAAGATCCCTTTAAAGCAAGGAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: RHSWDSRDTVQWPVN*PKELKEDPFKARKV Trigger: AACTTTCCTTGCTTTAAAGGGATCTTCCTTTAATTCCTTGGGCCAATTTACTGGCCATTGAACAGTGTCCCTTGAGTCCCAACTGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CAA 90 bp | GTCTCAAACCCAACGGGAGTGCGCGTCTCCCAGGCTCTGTCCCTCTaGCAGGCCAGGGCTCTGGCCAGAGGGCCGGGCAGAAACAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VSNPTGVRVSQALSL*QARALARGPGRNKR Trigger: CCTCTTGTTTCTGCCCGGCCCTCTGGCCAGAGCCCTGGCCTGCAAGAGGGACAGAGCCTGGGAGACGCGCACTCCCGTTGGGTTTGAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CAA 90 bp | AGGAGATCCTCCCGGGCCAGCGCTCAGCAGGCTCGCAGCCCACATTaGCTGAGCAAGTATCTGGAAAGGGTCCAACCAGCCGGGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: RRSSRASAQQARSPH*LSKYLERVQPAGQC Trigger: ACATTGCCCGGCTGGTTGGACCCTTTCCAGATACTTGCTCAGCAAATGTGGGCTGCGAGCCTGCTGAGCGCTGGCCCGGGAGGATCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTGGGACTCAAGGGACACTGTTCGGATGGGGCCGAGGGTaGAGGGAGTACGAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: GWVRRFPRDTVGTQGTLFGWGRG*REYETA Trigger: TGCTGTCTCGTACTCCCTGCACCCTCGGCCCCATCC...GAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTGGCTTCGGATTCCTCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCAGAACCTCCCTGACTaGTGGGGTCTGGGGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KLWLRIPRPFLTAVKEDAQNLPD*WGLGTG Trigger: TCCTGTCCCCAGACCCCATCAGTCAGGGAGGTTCTG...GGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGAGGAATCCGAAGCCAGAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAAATGGAAGAGGAGGGCCTGTGACACAGGGTGGGCAAGCAGCCTGCTGAGAACGACGCTTGCACGGTaGCTGCAGTCATCCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LKWKRRACDTGWASSLLRTTLAR*LQSSSL Trigger: CAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGT...TCTCAGCAGGCTGCTTGCCCACCCTGTGTCACAGGCCCTCCTCTTCCATTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTAAACCTGCAGCCCAGTaGACCACAAGGTATGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GPLTLLSRDPEVDASLASKPAAQ*TTRYGG Trigger: GCCCCCATACCTTGTGGTCCACTGGGCTGCAGGTTT...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCCTGAGTCCCAAGCTCTaGCTTCGGATTCCTCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VRLLLAGTEAERTLQFNRLSPKL*LRIPRP Trigger: GGGCCGAGGAATCCGAAGCCAGAGCTTGGGACTCAG...GCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACTAGGCCTCCACGACGCTTaGACGGTGGCTGCAGTCATC | + |
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Preference number: 2 (lower is better) Translates to: AQRDQAQVQRQAFPVTELGLHDA*TVAAVI Trigger: GATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCC...TAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GTGAGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCACACACCTCGGCACATaGGCACTTGGCTGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: VRLLLAGTEAERTLQFNRTHLGT*ALGWTD Trigger: GTCTGTCCAGCCAAGTGCGCATGTGCCGAGGTGTGT...GCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CCA 90 bp | CTGAAATGGAAGAGGAGGGCCTGTGACACAGGGTGGGCAAGCAGCCTGCTGAGAAGACCAGGCACAATGTaGGACACACCTCGGCACATG | + |
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Preference number: 2 (lower is better) Translates to: LKWKRRACDTGWASSLLRRPGTM*DTPRHM Trigger: CATGTGCCGAGGTGTGTCCCACATTGTGCCTGGTCT...TCTCAGCAGGCTGCTTGCCCACCCTGTGTCACAGGCCCTCCTCTTCCATTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTACCCTGGCCTACACATaGACAGAAAGCTCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GPLTLLSRDPEVDASLASTLAYT*TESSSR Trigger: CCTGCTTGAGCTTTCTGTGCATGTGTAGGCCAGGGT...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTGGGACTCAAGGGACACTGTTCCTACATGCTGCTCACTaGGAAGCAGCAGCACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GWVRRFPRDTVGTQGTLFLHAAH*EAAALR Trigger: TCTGAGTGCTGCTGCTTCTCAGTGAGCAGCATGTAG...GAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR TCA 90 bp | GGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCGAAGAGGAGGGCCTGTaGCACAGGGTGGGCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: GCKPCLFSTLIRESSTRSEEEGL*HRVGKQ Trigger: CTGCTTGCCCACCCTGTGTCACAGGCCCTCCTCTTC...GCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGAAGTGGGAGGTCAGCAGGGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTAGCTGTCAAGGAAGATaGCCTTGGGCTGGCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: WEVGGQQGWVRRFPRDTVSCQGR*PWAGSF Trigger: AAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCT...AACTGTGTCTCTGGGGAACCTCCTTACCCACCCCTGCTGACCTCCCACTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTGGGACTCAAGGGACACTGTTCAGGAGACAGTTTCCCTaGAAAGACTCATGCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GWVRRFPRDTVGTQGTLFRRQFP*KDSCLP Trigger: GGGGAGGCATGAGTCTTTGCAGGGAAACTGTCTCCT...GAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CAA 90 bp | GACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTaGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: DRSLSSVGTLKWMQA*PLLYPDQRIQYKKP Trigger: GGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGAACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCAGGAAAGGCTCACAATaGACCCAGTCTCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: LRNERALDLVCESRTQRCRKGSQ*TQSPGP Trigger: GGGTCCTGGAGACTGGGTTCATTGTGAGCCTTTCCT...GCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGTTGACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTATGCAGTCATCCTCACTaGCCAGGTTCTTTGTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CQLTGPWRKTCSPVDHKVCSHPH*PGSLCR Trigger: CCTACACAAAGAACCTGGGCAGTGAGGATGACTGCA...TACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR GCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTACCAGGTTAACTACATaGTGCTCACTGAGAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GPLTLLSRDPEVDASLASTRLTT*CSLRSS Trigger: GCTGCTTCTCAGTGAGCAGCATGTAGTTAACCTGGT...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR TCA 90 bp | GTGAGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCGCCTCTTCTCTACCCTaGTCAGAGAATCCAGTACAA | + |
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Preference number: 2 (lower is better) Translates to: VRLLLAGTEAERTLQFNRASSLP*SENPVQ Trigger: TTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGC...GCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGCGGCACATGCGCACTTaGCTGGACAGACAGGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KWMQALPLLYPDQRIQYKRHMRT*LDRQAA Trigger: TGCTGCCTGTCTGTCCAGCCAAGTGCGCATGTGCCG...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | GGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTGGGACTCAAGGGACACTGTTCCAAGTGGGCCAGCTTTaGTTCTGGTCTGAAATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GWVRRFPRDTVGTQGTLFQVGQL*FWSEME Trigger: TTCCATTTCAGACCAGAACCAAAGCTGGCCCACTTG...GAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGGAACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCCCTACCATGGACAAGTaGGCCAGCTTTGGTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LRNERALDLVCESRTQRCPTMDK*ASFGSG Trigger: ACCAGAACCAAAGCTGGCCCACTTGTCCATGGTAGG...GCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGACAGAACCTCCCTaGCTGATGGGGTCTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KWMQALPLLYPDQRIQYKKTEPP*LMGSGD Trigger: GTCCCCAGACCCCATCAGTCAGGGAGGTTCTGTCTT...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR GCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTTGCTCAGAGTCTCCATaGCATCAGGAGGTAAATATA | + |
|
Preference number: 2 (lower is better) Translates to: GPLTLLSRDPEVDASLASCSESP*HQEVNI Trigger: TATATTTACCTCCTGATGGCATGGAGACTCTGAGCA...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR GCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGCCCTGGAGGAAAACCTaGAGCCCAGTGGACCACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KWMQALPLLYPDQRIQYKPWRKT*SPVDHK Trigger: CTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGG...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR GCA 90 bp | CTCACTGCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTAGGTTAACTACATGCTaGTCACTGAGAAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LTAQRDQAQVQRQAFPVTRLTTC*SLRSSS Trigger: GCTGCTGCTTCTCAGTGAGCAGCATGTAGTTAACCT...AGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGCAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | GGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCGTCCATGAGAAGGGATaGTGTGGCTCAGGACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GCKPCLFSTLIRESSTRSVHEKG*CGSGLP Trigger: AGGCAGTCCTGAGCCACACCATCCCTTCTCATGGAC...GCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAAGTGGGAGGTCAGCAGGGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTACCAAAAATATACACTaGAGTTTGCAGAATCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WEVGGQQGWVRRFPRDTVTKNIH*SLQNLG Trigger: CCCCAGATTCTGCAAACTGCAGTGTATATTTTTGGT...AACTGTGTCTCTGGGGAACCTCCTTACCCACCCCTGCTGACCTCCCACTTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTATGGCCACCACACCCTaGCCTACACATGCACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: FSTLIRESSTRSPCRCLPMATTP*PTHAQK Trigger: TTTCTGTGCATGTGTAGGCCAGGGTGTGGTGGCCAT...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 90 bp | GACTTCCACCTACATTCTCTCTCTGCTCATCAAGTCCCCCTCATTTaGACCCAAAAGCTTCTCCTACCATGGACAAGTGGGCCAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: DFHLHSLSAHQVPLI*TQKLLLPWTSGPAL Trigger: CAAAGCTGGCCCACTTGTCCATGGTAGGAGAAGCTTTTGGGTCAAAATGAGGGGGACTTGATGAGCAGAGAGAGAATGTAGGTGGAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGGCTTTGGTTCTGGTCTaGAATGGAAGAGGAGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KWMQALPLLYPDQRIQYKALVLV*NGRGGP Trigger: AGGCCCTCCTCTTCCATTTCAGACCAGAACCAAAGC...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR TCA 90 bp | GCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACTAATACCTAAGATATGCTaGCCAAATCACCACCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AQRDQAQVQRQAFPVTELIPKIC*PNHHPQ Trigger: CTGTGGGTGGTGATTTGGTCAGCATATCTTAGGTAT...TAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCTTCTCCTACCATaGACAAGTGGGCCAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KWMQALPLLYPDQRIQYKKLLLP*TSGPAL Trigger: CAAAGCTGGCCCACTTGTCCATGGTAGGAGAAGCTT...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR GCA 90 bp | GGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCATATACACTGCAGTTTaGAGAATCTGGGGTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: GCKPCLFSTLIRESSTRSIYTAV*RIWGGT Trigger: TGTCCCACCCCAGATTCTGCAAACTGCAGTGTATAT...GCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | GGTCCAACCAGCCGGGCAATGTGCAGAGGGCCGAGGTaGTCACGGGATGGGGCCGAGGGTGCAGGGAGTACG | + |
|
Preference number: 3 (lower is better) Translates to: GPTSRAMCRGPR*SRDGAEGAGST Trigger: CGTACTCCCTGCACCCTCGGCCCCATCCCGTGAGCACCTCGGCCCTCTGCACATTGCCCGGCTGGTTGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | CCGGGCAATGTGCAGAGGGCCGAGGTGCTCACGGGATaGGGCCGAGGGTGCAGGGAGTACGAGACAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGNVQRAEVLTG*GRGCREYETAS Trigger: GCTTGCTGTCTCGTACTCCCTGCACCCTCGGCCCCATCCCGTGAGCACCTCGGCCCTCTGCACATTGCCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | CAGACCTGCTCCAGGCTTCCTGAGAGGCGGCTGAGCTaGGCTGCACGGAGCGCACAGGTCTCCTGGGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QTCSRLPERRLS*AARSAQVSWEL Trigger: CAACTCCCAGGAGACCTGTGCGCTCCGTGCAGCTCAGCTCAGCCGCCTCTCAGGAAGCCTGGAGCAGGTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | CCGCTCCTGGGCGAGCCCAGCACCCTTCACCGCTCCTaGCAACACGCCAGATGCACTGGGCTCTCTGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: PLLGEPSTLHRS*QHARCTGLSVL Trigger: AAGTACAGAGAGCCCAGTGCATCTGGCGTGTTGCCAGGAGCGGTGAAGGGTGCTGGGCTCGCCCAGGAGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | TGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTATaGGGGCCGCTCCTGGGCGAGCCCAGCACCCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WRKTCSPVDHKV*GPLLGEPSTLH Trigger: GTGAAGGGTGCTGGGCTCGCCCAGGAGCGGCCCCCATACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | CCGAGGGTGCAGGGAGTACGAGACAGCAAGCCCCCATaGGGAAAAGCAGCCCTCACTGCTCAGCGGGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRVQGVRDSKPP*GKAALTAQRDQ Trigger: CTGATCCCGCTGAGCAGTGAGGGCTGCTTTTCCCCATGGGGGCTTGCTGTCTCGTACTCCCTGCACCCTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | GGAGGGCCTGTGACACAGGGTGGGCAAGCAGCCTGCTaGGAAGACAGAACCTCCCTGACTGATGGGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GGPVTQGGQAAC*EDRTSLTDGVW Trigger: CCAGACCCCATCAGTCAGGGAGGTTCTGTCTTCTCAGCAGGCTGCTTGCCCACCCTGTGTCACAGGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | GCCGGGCAGAAACAAGAGGTAGGCCTCCACGACGCTTaGACGGTGGCTGCAGTCATCCTCACTGCCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: AGQKQEVGLHDA*TVAAVILTAQV Trigger: AACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCTACCTCTTGTTTCTGCCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | GACTTGGTCTGTGAATCCAGAACGCAGAGGTGCGGGTaGCCCGTGGATCAGGGTGGCCTCAGGGAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVCESRTQRCG*PVDQGGLREPK Trigger: CTTTGGCTCCCTGAGGCCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | ACACACACACGGGCGTGGCACAGACCAGGCACAATGTaGGACACACCTCGGCACATGCGCACTTGGCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: THTRAWHRPGTM*DTPRHMRTWLD Trigger: GTCCAGCCAAGTGCGCATGTGCCGAGGTGTGTCCCACATTGTGCCTGGTCTGTGCCACGCCCGTGTGTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | TCTGTGAATCCAGAACGCAGAGGTGCGGGTGCCCCGTaGATCAGGGTGGCCTCAGGGAGCCAAAGCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVNPERRGAGAP*IRVASGSQSTA Trigger: AGCTGTGCTTTGGCTCCCTGAGGCCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | GCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTaGGGGTGCCCCGTGGATCAGGGTGGCCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ALDLVCESRTQR*GCPVDQGGLRE Trigger: CTCCCTGAGGCCACCCTGATCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CAA 90 bp | AAGCTCTGGCTTCGGATTCCTCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCTCGGCACATGCGCACTaGGCTGGACAGACAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KLWLRIPRPFLTAVKEDASAHAH*AGQTGS Trigger: GCTGCCTGTCTGTCCAGCCAAGTGCGCATGTGCCGA...GGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGAGGAATCCGAAGCCAGAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR CCA 72 bp | CAATGTGGGACACACCTCGGCACATGCGCACTTGGCTaGACAGACAGGCAGCAGGTTGTGTCTCTAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QCGTHLGTCALG*TDRQQVVSLGA Trigger: TGCCCCTAGAGACACAACCTGCTGCCTGTCTGTCCAGCCAAGTGCGCATGTGCCGAGGTGTGTCCCACATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGAACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCCAGGTCTCCTGGGAGTaGTCCAGTGGCGTGGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRNERALDLVCESRTQRCQVSWE*SSGVGV Trigger: GACCCCCACGCCACTGGACAACTCCCAGGAGACCTG...GCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTCAGGCTCTGTCCCTCTaGCAGGCCAGGGCTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSTLIRESSTRSPCRCLPQALSL*QARALA Trigger: GGCCAGAGCCCTGGCCTGCAAGAGGGACAGAGCCTG...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | GCAACTCAGGAACGAACGGGCTTTAGACTTGGTCTGTaGATCCAGAACGCAGAGGTGCGGGTGCCCCGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ATQERTGFRLGL*IQNAEVRVPRG Trigger: TCCACGGGGCACCCGCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| 3UTR GCA 72 bp | ACAAGAGGTAGGCCTCCACGACGCTTGCACGGTGGCTaGAGTCATCCTCACTGCCCAGGTTCTTTGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRGRPPRRLHGG*SHPHCPGSLCR Trigger: CCTACACAAAGAACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCTACCTCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | CGGATGTCCATGAGAAGGGATGGTGTGGCTCAGGACTaGCTACGGGAAGGAGGGAGGAAACTTCCGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RMSMRRDGVAQD*LREGGRKLPVP Trigger: AGGAACCGGAAGTTTCCTCCCTCCTTCCCGTAGGCAGTCCTGAGCCACACCATCCCTTCTCATGGACATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | GAAAGGCTCACAATGAACCCAGTCTCCAGGACCCACTaGTTGCCAGGGGCTTCTCTTCCCAAGGGGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: ERLTMNPVSRTH*LPGASLPKGIQ Trigger: CTGTATCCCCTTGGGAAGAGAAGCCCCTGGCAAGCAGTGGGTCCTGGAGACTGGGTTCATTGTGAGCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | AGGAGACAGTTTCCCTGCAAAGACTCATGCCTCCCCTaGCAGGAAAGGCTCACAATGAACCCAGTCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRQFPCKDSCLP*QERLTMNPVSR Trigger: CCTGGAGACTGGGTTCATTGTGAGCCTTTCCTGCCAGGGGAGGCATGAGTCTTTGCAGGGAAACTGTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGTTGACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTACCCACTGCAAGCAGTTaGAGTTGTGGCATTGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CQLTGPWRKTCSPVDHKVPTASS*SCGIEL Trigger: CAACTCAATGCCACAACTCAAACTGCTTGCAGTGGG...TACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CAA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTGTTCCTCTCAATATCTaGATGCCAGTTGACTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPLTLLSRDPEVDASLASVPLNI*MPVDWS Trigger: GGACCAGTCAACTGGCATCAAGATATTGAGAGGAAC...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR GCA 72 bp | AGAAGCTGGAGGAGACAGTTTCCCTGCAAAGACTCATaGCTCCCCTGGCAGGAAAGGCTCACAATGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSWRRQFPCKDS*LPWQERLTMNP Trigger: TGGGTTCATTGTGAGCCTTTCCTGCCAGGGGAGGCATGAGTCTTTGCAGGGAAACTGTCTCCTCCAGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | GCAGGGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTaGGACTCAAGGGACACTGTTCAATGGCCAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: AGVGKEVPQRHS*DSRDTVQWPVN Trigger: ATTTACTGGCCATTGAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | CTGGGGTGGGACATAAACAGATGTTACATTCCAATCTaGGTCCCAAGCTCTGGCTTCGGATTCCTCGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGWDINRCYIPI*VPSSGFGFLGP Trigger: AGGGCCGAGGAATCCGAAGCCAGAGCTTGGGACTCAGATTGGAATGTAACATCTGTTTATGTCCCACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | ACAAACAGAAGTACCGAGAGTACCGTTCAGGGGCCTTaGCGGCAACTCAGGAACGAACGGGCTTTAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TNRSTESTVQGP*RQLRNERALDL Trigger: CAAGTCTAAAGCCCGTTCGTTCCTGAGTTGCCGTCAAGGCCCCTGAACGGTACTCTCGGTACTTCTGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGTTGACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTAAGTTGTCTACATGATTaGCTCAGAGTCTCCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CQLTGPWRKTCSPVDHKVSCLHD*LRVSMP Trigger: TGGCATGGAGACTCTGAGCAAATCATGTAGACAACT...TACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | AAACAGATGTTACATTCCAATCTGAGTCCCAAGCTCTaGCTTCGGATTCCTCGGCCCTTCCTCACAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQMLHSNLSPKL*LRIPRPFLTAV Trigger: GACAGCTGTGAGGAAGGGCCGAGGAATCCGAAGCCAGAGCTTGGGACTCAGATTGGAATGTAACATCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | CCTGAAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTaGTCAGAGAATCCAGTACAAGAAGCCCATGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PEVDASLASSLP*SENPVQEAHAD Trigger: ATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | TTCCCAAGGGGATACAGGTCCCCCTTCCAGTTTCAGTaGTCTTTAAGAACAGTGATCCTAGCTCATCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPRGYRSPFQFQ*SLRTVILAHQG Trigger: GCCTTGATGAGCTAGGATCACTGTTCTTAAAGACCACTGAAACTGGAAGGGGGACCTGTATCCCCTTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR TCA 72 bp | GCACTGGGCTCTCTGTACTTCCCACTGCAAGCAGTTTaGGTTGTGGCATTGAGTTGTCTACATGATTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ALGSLYFPLQAV*VVALSCLHDLL Trigger: GAGCAAATCATGTAGACAACTCAATGCCACAACTCAAACTGCTTGCAGTGGGAAGTACAGAGAGCCCAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CCA 72 bp | TGGGACTCAAGGGACACTGTTCAATGGCCAGTAAATTaGCCCAAGGAATTAAAGGAAGATCCCTTTAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WDSRDTVQWPVN*PKELKEDPFKA Trigger: TGCTTTAAAGGGATCTTCCTTTAATTCCTTGGGCCAATTTACTGGCCATTGAACAGTGTCCCTTGAGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCGCCCGGACCCGCCGCTaGCGGCGAGCAGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SALPHSCQGRCPWAGSFPARTRR*RRAGGQ Trigger: TTGTCCTCCTGCTCGCCGGCAGCGGCGGGTCCGGGC...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCCACGACGCTTGCACGGTGGCTGCAGTCATCCTCACTGCCCAGGTTCTCCACAGGGCCCCACATaGAGGGGTGCGCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPPRRLHGGCSHPHCPGSPQGPT*RGAQAP Trigger: AGGAGCCTGCGCACCCCTCCATGTGGGGCCCTGTGG...AGAACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | GGCCGGGCAGAAACAAGAGGTAGGCCTCCACGACGCTaGCACGGTGGCTGCAGTCATCCTCACTGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRAETRGRPPRR*HGGCSHPHCPG Trigger: ACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCTACCTCTTGTTTCTGCCCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | TCCCGGGCCAGCGCTCAGCAGGCTCGCAGCCCACATTaGCTGAGCAAGTATCTGGAAAGGGTCCAACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRASAQQARSPH*LSKYLERVQPA Trigger: GGCTGGTTGGACCCTTTCCAGATACTTGCTCAGCAAATGTGGGCTGCGAGCCTGCTGAGCGCTGGCCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTTCAGTGACCGCATCATaGCGGACAGCCAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLTLLSRDPEVDASLASSVTAS*RTARPR Trigger: CCTGGGCCTGGCTGTCCGTCATGATGCGGTCACTGA...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTCCCCACATGGAGGGGTaGGCAGGCTCCTTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLTLLSRDPEVDASLASPHMEG*AGSLRC Trigger: ACACCTCAAGGAGCCTGCGCACCCCTCCATGTGGGG...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | CTGAAATGGAAGAGGAGGGCCTGTGACACAGGGTGGGCAAGCAGCCTGCTGAGAGTTGCGCAGATCCTCTaGACTCAGGCAGTAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKWKRRACDTGWASSLLRVAQIL*TQAVEG Trigger: CCCTTCTACTGCCTGAGTTCAGAGGATCTGCGCAAC...TCTCAGCAGGCTGCTTGCCCACCCTGTGTCACAGGCCCTCCTCTTCCATTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | TGGAAGAGGAGGGCCTGTGACACAGGGTGGGCAAGCAGCCTGCTGAGAAGACAGTGTCTATGGTGTCAGTaGCCGCATCATGACGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: WKRRACDTGWASSLLRRQCLWCQ*PHHDGQ Trigger: CTGTCCGTCATGATGCGGTCACTGACACCATAGACA...CTGTCTTCTCAGCAGGCTGCTTGCCCACCCTGTGTCACAGGCCCTCCTCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | GACAGGCAGCAGGTTGTGTCTCTAGGGGCAGTCCCTCCGGATGTCCATGAGAAGTGGTTCGGGCCACTGTaGGCTGGACAAAAAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: DRQQVVSLGAVPPDVHEKWFGPL*AGQKGV Trigger: TACCCCTTTTTGTCCAGCGCACAGTGGCCCGAACCA...CTTCTCATGGACATCCGGAGGGACTGCCCCTAGAGACACAACCTGCTGCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCTGGTCTGTAGGCAGCTaGTGCACGCACACAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRLLLAGTEAERTLQFNRWSVGS*CTHTAE Trigger: CTCTGCTGTGTGCGTGCACCAGCTGCCTACAGACCA...GCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCAGCCAGACCCTGACGTaGAGAGGTCGTAGACGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SALPHSCQGRCPWAGSFPSQTLT*RGRRRD Trigger: ATCTCGTCTACGACCTCTCCACGTCAGGGTCTGGCT...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGCTGCTGGCAGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCCGGGCCACTGTGCGCTaGACAAAAAGGGGTAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLLLAGTEAERTLQFNRRATVR*TKRGNP Trigger: AGGGTTACCCCTTTTTGTCCAGCGCACAGTGGCCCG...GCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCTGCCAGCAGCAGCCTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCCACGACGCTTGCACGGTGGCTGCAGTCATCCTCACTGCCCAGGTTCTTCCTGCACGCTTAGCTaGGACAGAGTCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RPPRRLHGGCSHPHCPGSSCTLS*DRVFLM Trigger: CATCAAGAAGACTCTGTCCCAGCTAAGCGTGCAGGA...AGAACCTGGGCAGTGAGGATGACTGCAGCCACCGTGCAAGCGTCGTGGAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | AGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCCTGTAATCACGGATACTAGACGGGGCCGGCGATaGTGCCGACCAGCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RYRGREDSTVQSPVITDTRRGRR*CRPAPQ Trigger: CTGTGGAGCTGGTCGGCATCATCGCCGGCCCCGTCT...AGTATCCGTGATTACAGGCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTCCCACAATCTCCATATaGAGGTGTGCCAAACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLTLLSRDPEVDASLASPTISI*RCAKPL Trigger: CAGTGGTTTGGCACACCTGCATATGGAGATTGTGGG...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCGGACTCCTCCAGAATTaGATCTTCGTGCAATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SALPHSCQGRCPWAGSFPGLLQN*IFVQSP Trigger: GGGAGATTGCACGAAGATGCAATTCTGGAGGAGTCC...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTTGACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTATCTCACAGGTGTAGTTaGTCTGTAGGCAGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQLTGPWRKTCSPVDHKVSHRCS*SVGSWC Trigger: GCACCAGCTGCCTACAGACCAACTACACCTGTGAGA...TACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTTGACTGGTCCCTGGAGGAAAACCTGCAGCCCAGTGGACCACAAGGTAGAGACAAGCCACAGCTaGGTCCAGGTGCCATTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CQLTGPWRKTCSPVDHKVETSHS*VQVPLS Trigger: AGATAATGGCACCTGGACCCAGCTGTGGCTTGTCTC...TACCTTGTGGTCCACTGGGCTGCAGGTTTTCCTCCAGGGACCAGTCAACTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TGGGAAGTGGGAGGTCAGCAGGGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTTTGGGCCGTAGCTTCTaGTCACATACAACCTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WEVGGQQGWVRRFPRDTVLGRSF*SHTTFR Trigger: GCGAAAGGTTGTATGTGACCAGAAGCTACGGCCCAA...AACTGTGTCTCTGGGGAACCTCCTTACCCACCCCTGCTGACCTCCCACTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | CTCACTGCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTTTTCATGGCGCAGCATaGCGGTCTGGTAGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTAQRDQAQVQRQAFPVTFHGAA*RSGRSL Trigger: CAGAGATCTACCAGACCGTCATGCTGCGCCATGAAA...AGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGCAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | CTCACTGCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACCAGCTCCACCTTaGGGATGCAGGTACGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LTAQRDQAQVQRQAFPVTEPAPP*GCRYVH Trigger: ATGTACGTACCTGCATCCCCAAGGTGGAGCTGGTTC...AGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGCAGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGTAAGGAGGTTCCCCAGAGACACAGTTGGGACTCAAGGGACACTGTTCCCCCACCCTCTGATTTaGAGCAATGTCTATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWVRRFPRDTVGTQGTLFPHPLI*SNVYGV Trigger: GACACCATAGACATTGCTCCAAATCAGAGGGTGGGG...GAACAGTGTCCCTTGAGTCCCAACTGTGTCTCTGGGGAACCTCCTTACCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACTAACCAGTTGGGGACATTaGGCCGTAGCTTCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQRDQAQVQRQAFPVTELTSWGH*AVASGH Trigger: GTGACCAGAAGCTACGGCCCAATGTCCCCAACTGGT...TAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACTAAACTCTGCCACCAGTTaGGGACATTGGGCCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQRDQAQVQRQAFPVTELNSATS*GHWAVA Trigger: AGCTACGGCCCAATGTCCCCAACTGGTGGCAGAGTT...TAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTAGATGTCGGCACATTTaGAGGAGTCAAAGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLTLLSRDPEVDASLASRCRHI*RSQSAS Trigger: TGAAGCACTTTGACTCCTTCAAATGTGCCGACATCT...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCGGTCTGGTAGATCTCTaGTTCACGGAACCAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LRNERALDLVCESRTQRCGLVDL*FTEPRP Trigger: CGGTCTTGGTTCCGTGAAGCAGAGATCTACCAGACC...GCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCACAGCTGGGTCCAGGTaGCATTATCTTTATTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SALPHSCQGRCPWAGSFPTAGSR*HYLYCQ Trigger: CTGACAATAAAGATAATGGCACCTGGACCCAGCTGT...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | CTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTaGCCTCTTCTCTACCCTGATCAGAGAATCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVGTLKWMQA*PLLYPDQRIQY Trigger: GTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | CTCAGGAACGAACGGGCTTTAGACTTGGTCTGTGAATCCAGAACGCAGAGGTGCTTGGTCCCCACCCTCTaGTTTGGAGCAATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LRNERALDLVCESRTQRCLVPTL*FGAMSM Trigger: CATAGACATTGCTCCAAATCAGAGGGTGGGGACCAA...GCACCTCTGCGTTCTGGATTCACAGACCAAGTCTAAAGCCCGTTCGTTCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTCAAAGTGCTTCATGTTaGTTGTCTCGTCAAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLTLLSRDPEVDASLASQSASC*LSRQGL Trigger: AAGTCCTTGACGAGACAATCAACATGAAGCACTTTG...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | GAAGGAGGGAGGAAACTTCCGGTTCCTCTCAATATCTaGATGCCAGTTGACTGGTCCCTGGAGGAAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGRKLPVPLNI*MPVDWSLEENL Trigger: CAGGTTTTCCTCCAGGGACCAGTCAACTGGCATCAAGATATTGAGAGGAACCGGAAGTTTCCTCCCTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | AACAAACAGAAGTACCGAGAGTACCGTTCAGGGGCCTaGACGGCAACTCAGGAACGAACGGGCTTTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: NKQKYREYRSGA*TATQERTGFRL Trigger: AAGTCTAAAGCCCGTTCGTTCCTGAGTTGCCGTCAAGGCCCCTGAACGGTACTCTCGGTACTTCTGTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTGGAGCGTCTTGTCTTTaGAGAGACACATCTCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSTLIRESSTRSPCRCLPGASCL*RDTSRK Trigger: CTTGCGAGATGTGTCTCTCCAAAGACAAGACGCTCC...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAGCAGCAGTGTGTGTTaGGCAGATCCTCTGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KWMQALPLLYPDQRIQYKSSSVC*ADPLNS Trigger: TGAGTTCAGAGGATCTGCGCAACACACACTGCTGCT...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTATCTTCACATCTTCCTaGACGCTTAGCTGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSTLIRESSTRSPCRCLPIFTSS*TLSWDR Trigger: TCTGTCCCAGCTAAGCGTGCAGGAAGATGTGAAGAT...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTTCTCTTGTAAAACAATaGTTCGGGCCACTGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSTLIRESSTRSPCRCLPSLVKQ*FGPLCA Trigger: AGCGCACAGTGGCCCGAACCATTGTTTTACAAGAGA...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CCA 90 bp | AGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCCTGTAATCACGGATACTGAGCCATGTATCGTTTaGTCCCCACCCTCTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYRGREDSTVQSPVITDTEPCIV*SPPSDL Trigger: CAAATCAGAGGGTGGGGACCAAACGATACATGGCTC...AGTATCCGTGATTACAGGCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| 3UTR CAA 72 bp | CTACATTCTCTCTCTGCTCATCAAGTCCCCCTCATTTaGACCCAAAAGCTTCTCCTACCATGGACAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLSAHQVPLI*TQKLLLPWTSG Trigger: CCCACTTGTCCATGGTAGGAGAAGCTTTTGGGTCAAAATGAGGGGGACTTGATGAGCAGAGAGAGAATGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR TCA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTCAGATAATCAAACAGTaGGCCATGCTCGTGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSTLIRESSTRSPCRCLPQIIKQ*AMLVIV Trigger: GACTATCACGAGCATGGCTCACTGTTTGATTATCTG...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | GCTCAGCGGGATCAGGCTCAGGTGCAAAGACAAGCGTTTCCAGTGACTGAACTATTGAAGGAGTCAAAGTaGTTCATGTTGATTGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AQRDQAQVQRQAFPVTELLKESK*FMLIVS Trigger: CGAGACAATCAACATGAAGCACTTTGACTCCTTCAA...TAGTTCAGTCACTGGAAACGCTTGTCTTTGCACCTGAGCCTGATCCCGCTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR GCA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAGAATTGCATCTTCGTaGAATCTCCCAGTAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KWMQALPLLYPDQRIQYKRIASS*NLPVDK Trigger: CTTGTCTACTGGGAGATTGCACGAAGATGCAATTCT...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS GCA 90 bp | CCAGCAGGAACCAGCTCCACCTTGGGGATGCAGGTACGTACATGGTaGTCCACGCCATCCAGGTTAAAGATGGAGACCATGCAAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAGTSSTLGMQVRTW*STPSRLKMETMQAP Trigger: TGGGGCTTGCATGGTCTCCATCTTTAACCTGGATGGCGTGGAGCACCATGTACGTACCTGCATCCCCAAGGTGGAGCTGGTTCCTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CAA 90 bp | TGGCAACACGCCAGATGCACTGGGCTCTCTGTACTTCCCACTGCAAGCAGTTTGGGAACCAGCTCCACCTaGGGGATGCAGGTACGTACA | + |
|
Preference number: 5 (lower is better) Translates to: WQHARCTGLSVLPTASSLGTSST*GMQVRT Trigger: TGTACGTACCTGCATCCCCAAGGTGGAGCTGGTTCC...CAAACTGCTTGCAGTGGGAAGTACAGAGAGCCCAGTGCATCTGGCGTGTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CAA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCTGGAGCGTCTTGTCTTaGGAGAGACACATCTCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SALPHSCQGRCPWAGSFPWSVLS*ERHISQ Trigger: TTGCGAGATGTGTCTCTCCAAAGACAAGACGCTCCA...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CAA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTAGATCCTGGAGCGTCTaGTCTTTGGAGAGACACATC | + |
|
Preference number: 5 (lower is better) Translates to: GPLTLLSRDPEVDASLASRSWSV*SLERHI Trigger: GATGTGTCTCTCCAAAGACAAGACGCTCCAGGATCT...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS TCA 90 bp | AAATCTTCACATCTTCCTGCACGCTTAGCTGGGACAGAGTCTTCTTaGTGCGCAGAGCTGTCAGACGGGCAGCACCATTGGCGTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSSHLPARLAGTESS*CAELSDGQHHWRTS Trigger: GCTGGTACGCCAATGGTGCTGCCCGTCTGACAGCTCTGCGCATCAAGAAGACTCTGTCCCAGCTAAGCGTGCAGGAAGATGTGAAGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS-3UTR CAA 90 bp | GGACCGCTCACTCTCCTCAGTAGGGACCCTGAAGTGGATGCAAGCCTTGCCTCTGTCGTAATACGGCAGTaGATAGTCTTCATGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPLTLLSRDPEVDASLASVVIRQ*IVFMDS Trigger: GGAGTCCATGAAGACTATCAACTGCCGTATTACGAC...AGAGGCAAGGCTTGCATCCACTTCAGGGTCCCTACTGAGGAGAGTGAGCGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
||
| CDS TCA 90 bp | GTTGCAGAAGTCAATATAGCAGCAGTGTGTGTTGCGCAGATCCTCTaGACTCAGGCAGTAGAAGGGCTTTCCAGCAGGAACCAGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VAEVNIAAVCVAQIL*TQAVEGLSSRNQLH Trigger: GTGGAGCTGGTTCCTGCTGGAAAGCCCTTCTACTGCCTGAGTTCAGAGGATCTGCGCAACACACACTGCTGCTATATTGACTTCTGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS-3UTR CAA 90 bp | AAGTGGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGCACCAGTTGGGGACATaGGGCCGTAGCTTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KWMQALPLLYPDQRIQYKHQLGT*GRSFWS Trigger: TGACCAGAAGCTACGGCCCAATGTCCCCAACTGGTG...CTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS-3UTR CAA 90 bp | GGATGCAAGCCTTGCCTCTTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCTCCCCGAACCGGCCCTaGCCGATAATCTCTTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: GCKPCLFSTLIRESSTRSSPNRP*PIISCK Trigger: TTTACAAGAGATTATCGGCAAGGGCCGGTTCGGGGA...GCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAAGAGGCAAGGCTTGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS-3UTR CAA 90 bp | TCGGCCCTTCCTCACAGCTGTCAAGGAAGATGCCCTTGGGCTGGCTCATTTCCCGTGCCATTATCTTTATaGTCAGCAGCAATAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SALPHSCQGRCPWAGSFPVPLSL*SAAIKP Trigger: TGGCTTTATTGCTGCTGACAATAAAGATAATGGCAC...GGGAAATGAGCCAGCCCAAGGGCATCTTCCTTGACAGCTGTGAGGAAGGGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS-3UTR CAA 90 bp | TTCTCTACCCTGATCAGAGAATCCAGTACAAGAAGCCCATGCAGATGCCTCCCTTCCCCACCCTCTGATTaGGAGCAATGTCTATGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FSTLIRESSTRSPCRCLPSPPSD*EQCLWC Trigger: ACACCATAGACATTGCTCCAAATCAGAGGGTGGGGA...AGGGAGGCATCTGCATGGGCTTCTTGTACTGGATTCTCTGATCAGGGTAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS-3UTR CAA 90 bp | AGGTACAGAGGCAGAGAGGACTCTACAGTTCAATCGCCTGTAATCACGGATACTTCAAAGTGCTTCATGTaGATTGTCTCGTCAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: RYRGREDSTVQSPVITDTSKCFM*IVSSRT Trigger: AGTCCTTGACGAGACAATCAACATGAAGCACTTTGA...AGTATCCGTGATTACAGGCGATTGAACTGTAGAGTCCTCTCTGCCTCTGTACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS GCA 72 bp | CTGTCTCACAGGTGTAGTTGGTCTGTAGGCAGCTGGTaGACGCACACAGCAGAGCCTGGATCCCCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSHRCSWSVGSW*THTAEPGSPGA Trigger: GGCCCCGGGGGATCCAGGCTCTGCTGTGTGCGTGCACCAGCTGCCTACAGACCAACTACACCTGTGAGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS CCA 72 bp | CATCTGTCTCACAGGTGTAGTTGGTCTGTAGGCAGCTaGTGCACGCACACAGCAGAGCCTGGATCCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: HLSHRCSWSVGS*CTHTAEPGSPG Trigger: CCCGGGGGATCCAGGCTCTGCTGTGTGCGTGCACCAGCTGCCTACAGACCAACTACACCTGTGAGACAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS CCA 72 bp | GGAACCAGCTCCACCTTGGGGATGCAGGTACGTACATaGTGCTCCACGCCATCCAGGTTAAAGATGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: GTSSTLGMQVRT*CSTPSRLKMET Trigger: GGTCTCCATCTTTAACCTGGATGGCGTGGAGCACCATGTACGTACCTGCATCCCCAAGGTGGAGCTGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS CCA 72 bp | AGTAGAAGGGCTTTCCAGCAGGAACCAGCTCCACCTTaGGGATGCAGGTACGTACATGGTGCTCCACGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRRAFQQEPAPP*GCRYVHGAPRH Trigger: ATGGCGTGGAGCACCATGTACGTACCTGCATCCCCAAGGTGGAGCTGGTTCCTGCTGGAAAGCCCTTCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS CCA 72 bp | GGACAAAAAGGGGTAACCCTGAGCCAGACCCTGACGTaGAGAGGTCGTAGACGAGATCCTGGAGCGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GQKGVTLSQTLT*RGRRRDPGASC Trigger: ACAAGACGCTCCAGGATCTCGTCTACGACCTCTCCACGTCAGGGTCTGGCTCAGGGTTACCCCTTTTTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS GCA 72 bp | ACCAGCTCCACCTTGGGGATGCAGGTACGTACATGGTaGTCCACGCCATCCAGGTTAAAGATGGAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: TSSTLGMQVRTW*STPSRLKMETM Trigger: CATGGTCTCCATCTTTAACCTGGATGGCGTGGAGCACCATGTACGTACCTGCATCCCCAAGGTGGAGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS CCA 72 bp | CTCTGCCACCAGTTGGGGACATTGGGCCGTAGCTTCTaGTCACATACAACCTTTCGCATCTCCTCAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LCHQLGTLGRSF*SHTTFRISSME Trigger: TTCCATTGAGGAGATGCGAAAGGTTGTATGTGACCAGAAGCTACGGCCCAATGTCCCCAACTGGTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS TCA 72 bp | GTCAATATAGCAGCAGTGTGTGTTGCGCAGATCCTCTaGACTCAGGCAGTAGAAGGGCTTTCCAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: VNIAAVCVAQIL*TQAVEGLSSRN Trigger: GTTCCTGCTGGAAAGCCCTTCTACTGCCTGAGTTCAGAGGATCTGCGCAACACACACTGCTGCTATATTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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| CDS TCA 72 bp | AATGGTCACTGTGTAGCGGTTCAGATAATCAAACAGTaGGCCATGCTCGTGATAGTCAGAGACAAGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: NGHCVAVQIIKQ*AMLVIVRDKPQ Trigger: CTGTGGCTTGTCTCTGACTATCACGAGCATGGCTCACTGTTTGATTATCTGAACCGCTACACAGTGACCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000544.12 |
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