Pregenerated sensors for ACVR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026836Ensembl transcript IDs: ENSMUST00000056376.12, ENSMUST00000090935.9, ENSMUST00000112599.8, ENSMUST00000112601.9, ENSMUST00000126407.2
Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTaGAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACC | + |
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Preference number: 1 (lower is better) Translates to: RERYAESHCLNAQIA*RIFPGSSTSLPLAT Trigger: GGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR GCA 90 bp | GATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTaGCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGT | + |
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Preference number: 1 (lower is better) Translates to: DRLQDLSGFLHFPPP*HQTCPPLSLCGVNS Trigger: ACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CCA 90 bp | GCCGATATTGCTGATTACGAATTCACCGCCTCCTTGAGCTTCCCGTaGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACT | + |
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Preference number: 1 (lower is better) Translates to: ADIADYEFTASLSFP*GVSRRPAKDTQRAT Trigger: AGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTCGTAATCAGCAATATCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR TCA 90 bp | CACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTaGTTACGAATTCACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: HRIPSATKSRCSRYC*LRIHRLLELPVGSV Trigger: GACACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CCA 90 bp | TCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTTTGGCAAGTTaGGTCTTTAAGATTAAGGGCCACAGTGCAAGTAAGGAATGCACA | + |
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Preference number: 1 (lower is better) Translates to: SRDRPVEYAANVLAS*VFKIKGHSASKECT Trigger: TGTGCATTCCTTACTTGCACTGTGGCCCTTAATCTTAAAGACCCAACTTGCCAAAACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR TCA 90 bp | GTAAAATGCAGCAGAGTCCAACGGTACATTTTTGTGTTGCCAGATTaGATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: VKCSRVQRYIFVLPD*IPIIQRQASGVRSQ Trigger: TTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACCGTTGGACTCTGCTGCATTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR GCA 90 bp | GCAAGTTGGGTCTTTAAGATTAAGGGCCACAGTGCAAGTAAGGAATaGACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATT | + |
|
Preference number: 1 (lower is better) Translates to: ASWVFKIKGHSASKE*TEFLVQRRVDAADI Trigger: AATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGTGCATTCCTTACTTGCACTGTGGCCCTTAATCTTAAAGACCCAACTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CCA 90 bp | TTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTaGAGTACGCAGCCAATGTTTTGGCAAGTTGGGTCTTTAAGATTA | + |
|
Preference number: 1 (lower is better) Translates to: FCVARLNSYYPETGQ*STQPMFWQVGSLRL Trigger: TAATCTTAAAGACCCAACTTGCCAAAACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR GCA 90 bp | TTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCCACTTCCCTCCCCCTTaGCACCAGACCTGCCCACCG | + |
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Preference number: 2 (lower is better) Translates to: FPWGVSRRPAKDTQRATVHFPPP*HQTCPP Trigger: CGGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTG...GACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CAA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTaGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: RSPAGSFRVPPLPSP*PPDLPTVKSLWCEQ Trigger: CTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR TCA 90 bp | GATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAGAGATGGATTCTGTTCTaGCAACCAGTCAGGCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: DRLQDLSGFLHFPPPCHQRWILF*QPVRPA Trigger: TGCTGGCCTGACTGGTTGTCAGAACAGAATCCATCT...CTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTTCTCCCCCTGGAACATaGCTGGGAAGAGACATCTGC | + |
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Preference number: 2 (lower is better) Translates to: NAQIACRIFPGSSTSLPLSPPGT*LGRDIC Trigger: GCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGA...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCGGACAAGGACAGCATTaGCTCTCCTTCTTGACACCG | + |
|
Preference number: 2 (lower is better) Translates to: FPWGVSRRPAKDTQRATVGQGQH*LSFLTP Trigger: CGGTGTCAAGAAGGAGAGTCAATGCTGTCCTTGTCC...GACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR GCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTCTGGGAAGAGACATCTaGTTCCGTCAAAGCAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: NAQIACRIFPGSSTSLPLLGRDI*FRQSSH Trigger: GTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAG...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCTCCCCCTGGAACATaGCTGGGAAGAGACATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSSPPGT*LGRDIC Trigger: GCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGA...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CAA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTaGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HRGLESQFLSEVRVV*VSPPGTWLGRDICF Trigger: GAAGCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | GATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAGACCGTTAAGTCTTTGTaGTGTGAACAGTTCATCGAG | + |
|
Preference number: 2 (lower is better) Translates to: DRLQDLSGFLHFPPPCHQTVKSL*CEQFIE Trigger: CTCGATGAACTGTTCACACCACAAAGACTTAACGGT...CTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CAA 90 bp | AGAGTAGATGCAGCCGATATTGCTGATTACGAATTCACCGCCTCCTaGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACG | + |
|
Preference number: 2 (lower is better) Translates to: RVDAADIADYEFTAS*SFPWGVSRRPAKDT Trigger: CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTCGTAATCAGCAATATCGGCTGCATCTACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGGGACAAGGACAGCATTaGCTCTCCTTCTTGACACCG | + |
|
Preference number: 2 (lower is better) Translates to: WGVSRRPAKDTQRATVLMGQGQH*LSFLTP Trigger: CGGTGTCAAGAAGGAGAGTCAATGCTGTCCTTGTCC...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCAGCATTAGGTCCCAGCTaGACAAGGACAGCATTGACT | + |
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Preference number: 2 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSALGPS*TRTALT Trigger: AGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGC...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCGCATTAGGTCCCAGCTaGACAAGGACAGCATTGACT | + |
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Preference number: 2 (lower is better) Translates to: EVRVVLVSPPGTWLGRDIALGPS*TRTALT Trigger: AGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGC...GATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGATTTGGTGTCTCCCCCTaGAACATGGCTGGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QTCPPLSLCGVNSSSRARFGVSP*NMAGKR Trigger: TCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAA...TCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR TCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTGGACAAGGACAGCATTaGCTCTCCTTCTTGACACCG | + |
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Preference number: 2 (lower is better) Translates to: HRGLESQFLSEVRVVLVSGQGQH*LSFLTP Trigger: CGGTGTCAAGAAGGAGAGTCAATGCTGTCCTTGTCC...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR GCA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGCACTTCCCTCCCCCTTaGCACCAGACCTGCCCACCG | + |
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Preference number: 2 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVHFPPP*HQTCPP Trigger: CGGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTG...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGAGCATTAGGTCCCAGCTaGACAAGGACAGCATTGACT | + |
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Preference number: 2 (lower is better) Translates to: VSRRPAKDTQRATVLMPRALGPS*TRTALT Trigger: AGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGC...TCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR GCA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTCTGGGAAGAGACATCTaGTTCCGTCAAAGCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: PPLSLCGVNSSSRARVTVLGRDI*FRQSSH Trigger: GTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAG...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGAGGTTAGGGTGGTTTTaGTGTCTCCCCCTGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: LPPDLPTVKSLWCEQFIERLGWF*CLPLEH Trigger: ATGTTCCAGGGGGAGACACCAAAACCACCCTAACCT...CTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | ACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTCCCCTGGAACATGGCTaGGAAGAGACATCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TVKSLWCEQFIEGSSHSFPLEHG*EETSAS Trigger: GGAAGCAGATGTCTCTTCCCAGCCATGTTCCAGGGG...AAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTAGGTTAGGGTGGTTTTaGTGTCTCCCCCTGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: PPLSLCGVNSSSRARVTVRLGWF*CLPLEH Trigger: ATGTTCCAGGGGGAGACACCAAAACCACCCTAACCT...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR TCA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTGGACAAGGACAGCATTaGCTCTCCTTCTTGACACCG | + |
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Preference number: 2 (lower is better) Translates to: QIEFLLSRDRPVEYAANVGQGQH*LSFLTP Trigger: CGGTGTCAAGAAGGAGAGTCAATGCTGTCCTTGTCC...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTTTTGGTGTCTCCCCCTaGAACATGGCTGGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PLSLCGVNSSSRARVTVFFGVSP*NMAGKR Trigger: TCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAA...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 49% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGTCTCCCCCTGGAACATaGCTGGGAAGAGACATCTGC | + |
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Preference number: 2 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVSPPGT*LGRDIC Trigger: GCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGA...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CAA 90 bp | TGTAAAATGCAGCAGAGTCCAACGGTACATTTTTGTGTTGCCAGATaGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CKMQQSPTVHFCVAR*NSYYPETGQWSTQP Trigger: TGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACCGTTGGACTCTGCTGCATTTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATCCAGAGACAGGCCAGTaGAGTACGCAGCCAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: HMHEAVSNKPLSAPVINNPETGQ*STQPMF Trigger: AAACATTGGCTGCGTACTCCACTGGCCTGTCTCTGG...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATGCATTAGGTCCCAGCTaGACAAGGACAGCATTGACT | + |
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Preference number: 2 (lower is better) Translates to: HMHEAVSNKPLSAPVINNALGPS*TRTALT Trigger: AGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGC...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CCA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATACCGTTAAGTCTTTGTaGTGTGAACAGTTCATCGAG | + |
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Preference number: 2 (lower is better) Translates to: HMHEAVSNKPLSAPVINNTVKSL*CEQFIE Trigger: CTCGATGAACTGTTCACACCACAAAGACTTAACGGT...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR GCA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATAGTGCAAGTAAGGAATaGACAGAATTCCTAGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: HMHEAVSNKPLSAPVINNSASKE*TEFLVQ Trigger: TTGCACTAGGAATTCTGTGCATTCCTTACTTGCACT...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTaGCCACCAGACCTGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: QRATVLMPRSPAGSFRVPPLPSP*PPDLPT Trigger: GGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTGG...AGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR GCA 72 bp | GTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCTaGTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VSPPGTWLGRDI*FRQSSHFGKGV Trigger: GACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR-3UTR CAA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGAGGTTAGGGTGGTTTaGGTGTCTCCCCCTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: NAQIACRIFPGSSTSLPLEVRVV*VSPPGT Trigger: TGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR GCA 72 bp | TACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTaGAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: YAESHCLNAQIA*RIFPGSSTSLP Trigger: GGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCTCGAGTCACAGTTTTaGAGCGAGGTTAGGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TASLSFPWGVSRRPAKDTLESQF*SEVRVV Trigger: AACCACCCTAACCTCGCTCAAAAACTGTGACTCGAG...CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR TCA 72 bp | CAGCCGATATTGCTGATTACGAATTCACCGCCTCCTTaGGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGA | + |
|
Preference number: 3 (lower is better) Translates to: QPILLITNSPPP*ASRGECLGDPR Trigger: TCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTCGTAATCAGCAATATCGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTGAGGTTAGGGTGGTTTaGGTGTCTCCCCCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: TQRATVLMPRSPAGSFRVEVRVV*VSPPGT Trigger: TGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CCA 72 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATaGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: EVRVVLVSPPGT*LGRDICFRQSS Trigger: GCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CCA 72 bp | CCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTaGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLPPDLPTVKSL*CEQFIEGSSHS Trigger: ACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCTCGAGTCACAGTTTTaGAGCGAGGTTAGGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSLESQF*SEVRVV Trigger: AACCACCCTAACCTCGCTCAAAAACTGTGACTCGAG...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CCA 72 bp | TTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTaGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LGWFWCLPLEHG*EETSASVKAAT Trigger: AGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTGAATTCACCGCCTCCTaGAGCTTCCCGTGGGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QIEFLLSRDRPVEYAANVEFTAS*SFPWGV Trigger: CACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTC...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTGAGGTTAGGGTGGTTTaGGTGTCTCCCCCTGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: QIEFLLSRDRPVEYAANVEVRVV*VSPPGT Trigger: TGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CCA 72 bp | GCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTaGAGTACGCAGCCAATGTTTTGGCAAGTTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARLNSYYPETGQ*STQPMFWQVGS Trigger: AGACCCAACTTGCCAAAACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR GCA 72 bp | GTCTTTAAGATTAAGGGCCACAGTGCAAGTAAGGAATaGACAGAATTCCTAGTGCAACGAAGAGTAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: VFKIKGHSASKE*TEFLVQRRVDA Trigger: TGCATCTACTCTTCGTTGCACTAGGAATTCTGTGCATTCCTTACTTGCACTGTGGCCCTTAATCTTAAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTAATATATCGGGTGGTGTTGCATGGGTAATGGCTAAATATGTTCTGCATACGTCCAACGGTACATTTTaGTGTTGCCAGATTGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SNISGGVAWVMAKYVLHTSNGTF*CCQIEF Trigger: GAATTCAATCTGGCAACACAAAAATGTACCGTTGGA...CGTATGCAGAACATATTTAGCCATTACCCATGCAACACCACCCGATATATTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGCACAGCCTGGCCAGGTaGCGGCGGGGTCTTACACGT | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWHSLAR*RRGLTR Trigger: ACGTGTAAGACCCCGCCGTCACCTGGCCAGGCTGTG...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACACCGGTGACAAGCAGCACTCCACAGCCTaGCCAGGTGACGGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPSWTRTALTLLLDTGDKQHSTA*PGDGGV Trigger: GACCCCGCCGTCACCTGGCCAGGCTGTGGAGTGCTG...CTTGTCACCGGTGTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCACAGCCTGGCCAGGTaGCGGCGGGGTCTTACACGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVLMPRSPAGSFRVPPLHSLAR*RRGLTR Trigger: ACGTGTAAGACCCCGCCGTCACCTGGCCAGGCTGTG...AAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACCAGCACTCCACAGCCTaGCCAGGTGACGGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPALGPSWTRTALTLLLDQHSTA*PGDGGV Trigger: GACCCCGCCGTCACCTGGCCAGGCTGTGGAGTGCTG...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTCAGCACTCCACAGCCTaGCCAGGTGACGGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AKDTQRATVLMPRSPAGSQHSTA*PGDGGV Trigger: GACCCCGCCGTCACCTGGCCAGGCTGTGGAGTGCTG...AGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGATTCTGTTCAGCACTCCACAGCCTaGCCAGGTGACGGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLLPSKQPLREGGQMDSVQHSTA*PGDGGV Trigger: GACCCCGCCGTCACCTGGCCAGGCTGTGGAGTGCTG...AACAGAATCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGAGCCATGTAGCGCTTaGTCCCCACACGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAQIACRIFPGSSTSLPLEPCSA*SPHGGC Trigger: ACAACCCCCGTGTGGGGACCAAGCGCTACATGGCTC...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CAA 72 bp | GCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTaGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSFRVPPLPSP*PPDLPTVKSLW Trigger: CCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAGCTCTTCAGATCTCGATaGGCAATGGCGGACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRLQDLSGFLHFPPPCHQLFRSR*AMADFP Trigger: AGGGAAGTCCGCCATTGCCCATCGAGATCTGAAGAG...CTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPDRLQDLSGFLHFPPPCSWFVL*ECMTAR Trigger: CCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCT...GCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGCACAGCCTGGCCAGGTaGCGGCGGGGTCTTACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPDLPTVKSLWCEQFIEHSLAR*RRGLTR Trigger: ACGTGTAAGACCCCGCCGTCACCTGGCCAGGCTGTG...CTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCTGCCAGGCCCAAATCTaGTATGCAGCACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CPDRLQDLSGFLHFPPPCCQAQI*YAALSI Trigger: AATGGACAGTGCTGCATAGCAGATTTGGGCCTGGCA...GCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGTGCTGGCCTTCACAGTaGTCCTCGTTCCCGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EHGWEETSASVKAATSGRCWPSQ*SSFPQE Trigger: CTCCTGCGGGAACGAGGACCACTGTGAAGGCCAGCA...CCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCTGCTGGCCTTCACAGTaGTCCTCGTTCCCGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRVVLVSPPGTWLGRDICWPSQ*SSFPQE Trigger: CTCCTGCGGGAACGAGGACCACTGTGAAGGCCAGCA...GATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGTCAGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTGCTGGCCTTCACAGTaGTCCTCGTTCCCGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSQASIRSQLDKDSIDSPCWPSQ*SSFPQE Trigger: CTCCTGCGGGAACGAGGACCACTGTGAAGGCCAGCA...AGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCTGACTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGTGATGAGCCACAGCTaGGTACTGGAGTGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAQIACRIFPGSSTSLPLVMSHS*VLECLE Trigger: CTCCAGACACTCCAGTACCCAGCTGTGGCTCATCAC...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGAGAGCCATGTAGCGCTTaGTCCCCACACGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EETSASVKAATSGRGSDGEPCSA*SPHGGC Trigger: ACAACCCCCGTGTGGGGACCAAGCGCTACATGGCTC...TCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CAA 72 bp | GCAGCCGATATTGCTGATTACGAATTCACCGCCTCCTaGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AADIADYEFTAS*SFPWGVSRRPA Trigger: CGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGTGAATTCGTAATCAGCAATATCGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATGGGCAGCTGGGCCGTaGTGTTCCTGTTACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSWAAGP*CSCYTS Trigger: ACTGGTGTAACAGGAACATCACGGCCCAGCTGCCCA...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCCGTCTCCCTGAACCATaGCTTCTCGTCTCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVRVVLVSPPGTWLGRDIRLPEP*LLVSGG Trigger: TCCTCCCGAGACGAGAAGTCATGGTTCAGGGAGACG...GATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGGTGATGAGCCACAGCTaGGTACTGGAGTGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWVMSHS*VLECLE Trigger: CTCCAGACACTCCAGTACCCAGCTGTGGCTCATCAC...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCCTCTTCAGATCTCGATaGGCAATGGCGGACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPWGVSRRPAKDTQRATVLFRSR*AMADFP Trigger: AGGGAAGTCCGCCATTGCCCATCGAGATCTGAAGAG...GACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTTGCTCACCATTCGCCTaGCCACTTCCCACAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NAQIACRIFPGSSTSLPLCSPFA*PLPTEQ Trigger: TTGTTCTGTGGGAAGTGGCCAGGCGAATGGTGAGCA...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| 3UTR CAA 72 bp | TCCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTaGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLPPDLPTVKS*WCEQFIEGSSH Trigger: GTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGTGGGCAGCTGGGCCGTaGTGTTCCTGTTACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMWAAGP*CSCYTS Trigger: ACTGGTGTAACAGGAACATCACGGCCCAGCTGCCCA...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | AACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGCGACATTTTCGCCTTaGCAGCTGCCCCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: NMAGKRHLLPSKQPLREGATFSP*QLPLHT Trigger: AGTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGC...CCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCACCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPAGSFRVPPLPSPLPPPNISM*KWARPL Trigger: CAGCGGCCTTGCCCATTTGCACATAGAGATATTTGG...TGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTTGCTGGCCTTCACAGTaGTCCTCGTTCCCGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRGLESQFLSEVRVVLVSCWPSQ*SSFPQE Trigger: CTCCTGCGGGAACGAGGACCACTGTGAAGGCCAGCA...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCGGGTACTGGAGTGTCTaGAGGTCATGTCTGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ETRERYAESHCLNAQIACGYWSV*RSCLKR Trigger: TCGCTTCAGACATGACCTCCAGACACTCCAGTACCC...GCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTGTGATGAGCCACAGCTaGGTACTGGAGTGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQRATVLMPRSPAGSFRVVMSHS*VLECLE Trigger: CTCCAGACACTCCAGTACCCAGCTGTGGCTCATCAC...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCAGTGATGAGCCACAGCTaGGTACTGGAGTGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSVMSHS*VLECLE Trigger: CTCCAGACACTCCAGTACCCAGCTGTGGCTCATCAC...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGCTCTTCAGATCTCGATaGGCAATGGCGGACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWLFRSR*AMADFP Trigger: AGGGAAGTCCGCCATTGCCCATCGAGATCTGAAGAG...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCATTTCCCACATCAAGCTaGTTTGTGCTCTGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPAGSFRVPPLPSPLPPFPTSS*FVLWEC Trigger: GCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAA...TGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGAGCAATCCACTTGGATaGTTTCATCGAGCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TASLSFPWGVSRRPAKDTSNPLG*FHRALP Trigger: CGGAAGTGCTCGATGAAACCATCCAAGTGGATTGCT...CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTGTGAGTCTTGCGGATaGGTTCTGATACCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FPWGVSRRPAKDTQRATVCESCG*VLIPAL Trigger: GAGTGCTGGTATCAGAACCCATCCGCAAGACTCACA...GACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGTGGGCAGCTGGGCCGTaGTGTTCCTGTTACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPDLPTVKSLWCEQFIEWAAGP*CSCYTS Trigger: ACTGGTGTAACAGGAACATCACGGCCCAGCTGCCCA...CTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTCGTCTCCCTGAACCATaGCTTCTCGTCTCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLESQFLSEVRVVLVSRLPEP*LLVSGG Trigger: TCCTCCCGAGACGAGAAGTCATGGTTCAGGGAGACG...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGACAATTCCGTCTCCCTaGACCATGACTTCTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWTIPSP*TMTSRL Trigger: GAGACGAGAAGTCATGGTTCAGGGAGACGGAATTGT...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCACAATTCCGTCTCCCTaGACCATGACTTCTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETRERYAESHCLNAQIACTIPSP*TMTSRL Trigger: GAGACGAGAAGTCATGGTTCAGGGAGACGGAATTGT...GCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTTTTCGCCTTGCCAGCTaGCCCTCCATACTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQRATVLMPRSPAGSFRVFRLAS*PSILLH Trigger: ATGGAGAAGTATGGAGGGGCAGCTGGCAAGGCGAAA...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGATTCTGTTGCGACATTTTCGCCTTaGCAGCTGCCCCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPSKQPLREGGQMDSVATFSP*QLPLHT Trigger: AGTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGC...AACAGAATCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | TTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCGGCCCAAATCTGCTATaGAGCACTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPWGVSRRPAKDTQRATVGPNLL*STVHSS Trigger: AGAAGAATGGACAGTGCTGCATAGCAGATTTGGGCC...GACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCTGCCAGGCCCAAATCTaGTATGCAGCACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSCQAQI*YAALSI Trigger: AATGGACAGTGCTGCATAGCAGATTTGGGCCTGGCA...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCCTGGGAATGCATGACTaGCAGGCCCAAATCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETRERYAESHCLNAQIACLGMHD*QAQICY Trigger: ATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAG...GCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGTTTGTGCTCTGGGAATaGATGACTGCCAGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWFVLWE*MTARPK Trigger: TTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAA...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGGCCAACTTCCAGGTaGAAATTCTGTGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVSRRPAKDTQRATVLMPRPTSR*KFCVPG Trigger: CCCCGGAACACAGAATTTCCACCTGGAAGTTGGCCT...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGAGGCCAACTTCCAGGTaGAAATTCTGTGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NMAGKRHLLPSKQPLREGRPTSR*KFCVPG Trigger: CCCCGGAACACAGAATTTCCACCTGGAAGTTGGCCT...CCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | GAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGCATACTCCACGTCTCTaGGGTTCAGGCGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHGWEETSASVKAATSGRHTPRL*GSGALD Trigger: ATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATG...CCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTGGGTACTGGAGTGTCTaGAGGTCATGTCTGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TQRATVLMPRSPAGSFRVGYWSV*RSCLKR Trigger: TCGCTTCAGACATGACCTCCAGACACTCCAGTACCC...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | CTGGAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAATGGGCAAGGCCGCTaGCTATGGACAGTACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHGWEETSASVKAATSGNGQGR*LWTVQS Trigger: GGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATT...TCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCATCTCTATGTGCAAATaGGCAAGGCCGCTGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSISMCK*ARPLAM Trigger: CATAGCCAGCGGCCTTGCCCATTTGCACATAGAGAT...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | GAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGAAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EETSASVKAATSGRGSDGSWFVL*ECMTAR Trigger: CCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCT...TCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGAGCCATGTAGCGCTTaGTCCCCACACGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLEPCSA*SPHGGC Trigger: ACAACCCCCGTGTGGGGACCAAGCGCTACATGGCTC...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTAGCAATCCACTTGGATaGTTTCATCGAGCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NAQIACRIFPGSSTSLPLSNPLG*FHRALP Trigger: CGGAAGTGCTCGATGAAACCATCCAAGTGGATTGCT...AAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| 3UTR CAA 72 bp | CTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTaGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LESQFLSEVRVV*VSPPGTWLGRD Trigger: GTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR TCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGCGTCTCCCTGAACCATaGCTTCTCGTCTCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLRLPEP*LLVSGG Trigger: TCCTCCCGAGACGAGAAGTCATGGTTCAGGGAGACG...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGAACAATTCCGTCTCCCTaGACCATGACTTCTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EETSASVKAATSGRGSDGTIPSP*TMTSRL Trigger: GAGACGAGAAGTCATGGTTCAGGGAGACGGAATTGT...TCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | AACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGCTTGCGGATGGGTTCTaGTACCAGCACTCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NMAGKRHLLPSKQPLREGLADGF*YQHSFI Trigger: GATGAAAGAGTGCTGGTATCAGAACCCATCCGCAAG...CCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTTGCCAGGCCCAAATCTaGTATGCAGCACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TQRATVLMPRSPAGSFRVCQAQI*YAALSI Trigger: AATGGACAGTGCTGCATAGCAGATTTGGGCCTGGCA...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGATGCCAGGCCCAAATCTaGTATGCAGCACTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LEHGWEETSASVKAATSGCQAQI*YAALSI Trigger: AATGGACAGTGCTGCATAGCAGATTTGGGCCTGGCA...TCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATTTGTGCTCTGGGAATaGATGACTGCCAGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSFVLWE*MTARPK Trigger: TTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAA...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTTTTGTGCTCTGGGAATaGATGACTGCCAGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRATVLMPRSPAGSFRVPFVLWE*MTARPK Trigger: TTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAA...AGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGGAAGAAAAACACTGCTaGCCTTCACAGTGGTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PDLPTVKSLWCEQFIEGSEEKHC*PSQWSS Trigger: CGAGGACCACTGTGAAGGCCAGCAGTGTTTTTCTTC...CGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCATACTCCACGTCTCTaGGGTTCAGGCGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMHTPRL*GSGALD Trigger: ATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATG...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGACATACTCCACGTCTCTaGGGTTCAGGCGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRRPAKDTQRATVLMPRHTPRL*GSGALD Trigger: ATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATG...TCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGGGTACTGGAGTGTCTaGAGGTCATGTCTGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QTCPPLSLCGVNSSSRARGYWSV*RSCLKR Trigger: TCGCTTCAGACATGACCTCCAGACACTCCAGTACCC...TCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGATTCTGTTAATGGGCAAGGCCGCTaGCTATGGACAGTACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLPSKQPLREGGQMDSVNGQGR*LWTVQS Trigger: GGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATT...AACAGAATCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGAATGGGCAAGGCCGCTaGCTATGGACAGTACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMNGQGR*LWTVQS Trigger: GGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATT...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTATCTCTATGTGCAAATaGGCAAGGCCGCTGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QRATVLMPRSPAGSFRVPISMCK*ARPLAM Trigger: CATAGCCAGCGGCCTTGCCCATTTGCACATAGAGAT...AGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTCPPLSLCGVNSSSRARSWFVL*ECMTAR Trigger: CCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCT...TCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCTTTCCCACATCAAGCTaGTTTGTGCTCTGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSFPTSS*FVLWEC Trigger: GCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAA...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGTGCTCACCATTCGCCTaGCCACTTCCCACAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMCSPFA*PLPTEQ Trigger: TTGTTCTGTGGGAAGTGGCCAGGCGAATGGTGAGCA...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACTGCTCACCATTCGCCTaGCCACTTCCCACAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RPALGPSWTRTALTLLLDCSPFA*PLPTEQ Trigger: TTGTTCTGTGGGAAGTGGCCAGGCGAATGGTGAGCA...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCATGTTTGGCCTCTGTTaGTCCACACAGACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSMFGLC*STQTTF Trigger: GAAAGTTGTCTGTGTGGATCAACAGAGGCCAAACAT...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGACTTGCGGATGGGTTCTaGTACCAGCACTCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSRRPAKDTQRATVLMPRLADGF*YQHSFI Trigger: GATGAAAGAGTGCTGGTATCAGAACCCATCCGCAAG...TCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTAGAGAAGAAAAACACTaGTGGCCTTCACAGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATVLMPRSPAGSFRVPPLREEKH*WPSQWS Trigger: GGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCT...AAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGCGACATTTTCGCCTTaGCAGCTGCCCCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLATFSP*QLPLHT Trigger: AGTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGC...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGCCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDLPTVKSLWCEQFIEGSPNISM*KWARPL Trigger: CAGCGGCCTTGCCCATTTGCACATAGAGATATTTGG...CGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCCCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVRVVLVSPPGTWLGRDIPNISM*KWARPL Trigger: CAGCGGCCTTGCCCATTTGCACATAGAGATATTTGG...GATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTGGCCCAAATCTGCTATaGAGCACTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATVLMPRSPAGSFRVPPLGPNLL*STVHSS Trigger: AGAAGAATGGACAGTGCTGCATAGCAGATTTGGGCC...AAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCGGCCCAAATCTGCTATaGAGCACTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVSRRPAKDTQRATVLMPGPNLL*STVHSS Trigger: AGAAGAATGGACAGTGCTGCATAGCAGATTTGGGCC...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTGGGTACTGGAGTGTCTaGAGGTCATGTCTGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLESQFLSEVRVVLVSGYWSV*RSCLKR Trigger: TCGCTTCAGACATGACCTCCAGACACTCCAGTACCC...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGATTCTGTTATCTCTATGTGCAAATaGGCAAGGCCGCTGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPSKQPLREGGQMDSVISMCK*ARPLAM Trigger: CATAGCCAGCGGCCTTGCCCATTTGCACATAGAGAT...AACAGAATCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTATGGCGGACTTCCCTTaGGTCCCAAATATCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ATVLMPRSPAGSFRVPPLMADFP*VPNISM Trigger: CATAGAGATATTTGGGACCCAAGGGAAGTCCGCCAT...AAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTATGGCGGACTTCCCTTaGGTCCCAAATATCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QRATVLMPRSPAGSFRVPMADFP*VPNISM Trigger: CATAGAGATATTTGGGACCCAAGGGAAGTCCGCCAT...AGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCCATGTAGCGCTTaGTCCCCACACGGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFEPCSA*SPHGGC Trigger: ACAACCCCCGTGTGGGGACCAAGCGCTACATGGCTC...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTAGCAATCCACTTGGATaGTTTCATCGAGCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQRATVLMPRSPAGSFRVSNPLG*FHRALP Trigger: CGGAAGTGCTCGATGAAACCATCCAAGTGGATTGCT...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAGCACATCATAGAATGGTaGCTTGTAATCTTCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DRLQDLSGFLHFPPPCHQHIIEW*LVIFHY Trigger: ATAGTGGAAGATTACAAGCCACCATTCTATGATGTG...CTGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGAACCACATCATAGAATaGTGGCTTGTAATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TASLSFPWGVSRRPAKDTNHIIE*WLVIFH Trigger: GTGGAAGATTACAAGCCACCATTCTATGATGTGGTT...CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGTGTGAGTCTTGCGGATaGGTTCTGATACCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMCESCG*VLIPAL Trigger: GAGTGCTGGTATCAGAACCCATCCGCAAGACTCACA...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCTGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETRERYAESHCLNAQIACCKVSG*PWASHL Trigger: AAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACA...GCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATCACAGCCTGGCCAGGTaGCGGCGGGGTCTTACACGT | + |
|
Preference number: 4 (lower is better) Translates to: HMHEAVSNKPLSAPVINNHSLAR*RRGLTR Trigger: ACGTGTAAGACCCCGCCGTCACCTGGCCAGGCTGTG...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | ACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGGGCAGCTGGGCCGTaGTGTTCCTGTTACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVKSLWCEQFIEGSSHSFWAAGP*CSCYTS Trigger: ACTGGTGTAACAGGAACATCACGGCCCAGCTGCCCA...AAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTCGTCTCCCTGAACCATaGCTTCTCGTCTCGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFRLPEP*LLVSGG Trigger: TCCTCCCGAGACGAGAAGTCATGGTTCAGGGAGACG...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGACAATTCCGTCTCCCTaGACCATGACTTCTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPDLPTVKSLWCEQFIETIPSP*TMTSRL Trigger: GAGACGAGAAGTCATGGTTCAGGGAGACGGAATTGT...CTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCATGTTTGGCCTCTGTTaGTCCACACAGACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVSRRPAKDTQRATVLMPMFGLC*STQTTF Trigger: GAAAGTTGTCTGTGTGGATCAACAGAGGCCAAACAT...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGATGTTTGGCCTCTGTTaGTCCACACAGACAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDLPTVKSLWCEQFIEGSMFGLC*STQTTF Trigger: GAAAGTTGTCTGTGTGGATCAACAGAGGCCAAACAT...CGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGAGAGAAGAAAAACACTaGTGGCCTTCACAGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMREEKH*WPSQWS Trigger: GGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCT...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | GCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTAGAGAAGAAAAACACTaGTGGCCTTCACAGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKDTQRATVLMPRSPAGSREEKH*WPSQWS Trigger: GGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCT...AGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACGGCCCAAATCTGCTATaGAGCACTGTCCATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPALGPSWTRTALTLLLDGPNLL*STVHSS Trigger: AGAAGAATGGACAGTGCTGCATAGCAGATTTGGGCC...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTCTGGGAATGCATGACTaGCAGGCCCAAATCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: HRGLESQFLSEVRVVLVSLGMHD*QAQICY Trigger: ATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAG...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTTTTGTGCTCTGGGAATaGATGACTGCCAGGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRGLESQFLSEVRVVLVSFVLWE*MTARPK Trigger: TTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAA...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGAATGGCGGACTTCCCTTaGGTCCCAAATATCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: VSRRPAKDTQRATVLMPRMADFP*VPNISM Trigger: CATAGAGATATTTGGGACCCAAGGGAAGTCCGCCAT...TCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGTCTGTTAGGTATGTTTaGCCTCTGTTGATCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GRDICFRQSSHFGKGVRWSVRYV*PLLIHT Trigger: TGTGTGGATCAACAGAGGCCAAACATACCTAACAGA...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCATGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RATVLMPRSPAGSFRVPPCKVSG*PWASHL Trigger: AAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACA...TGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTGCGACATTTTCGCCTTaGCAGCTGCCCCTCCATACT | + |
|
Preference number: 4 (lower is better) Translates to: TVKSLWCEQFIEGSSHSFATFSP*QLPLHT Trigger: AGTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGC...AAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCAAAGCAATCCACTTaGATGGTTTCATCGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PPCHQTCPPLSLCGVNSSSKQST*MVSSST Trigger: AGTGCTCGATGAAACCATCCAAGTGGATTGCTTTGA...TGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAAGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGTGTGAGTCTTGCGGATaGGTTCTGATACCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLCESCG*VLIPAL Trigger: GAGTGCTGGTATCAGAACCCATCCGCAAGACTCACA...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTGTGAGTCTTGCGGATaGGTTCTGATACCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLSLCGVNSSSRARVTVCESCG*VLIPAL Trigger: GAGTGCTGGTATCAGAACCCATCCGCAAGACTCACA...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGATGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTCPPLSLCGVNSSSRARCKVSG*PWASHL Trigger: AAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACA...TCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGCGTGGAAGCCATCGTTaGTGCTCAGAGAAGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLRGSHR*CSEKKN Trigger: GTTTTTCTTCTCTGAGCATCAACGATGGCTTCCACG...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTAGGCCAACTTCCAGGTaGAAATTCTGTGTTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFRPTSR*KFCVPG Trigger: CCCCGGAACACAGAATTTCCACCTGGAAGTTGGCCT...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIEFLLSRDRPVEYAANVSWFVL*ECMTAR Trigger: CCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCT...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTAGCAATCCACTTGGATaGTTTCATCGAGCACTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPLSLCGVNSSSRARVTVSNPLG*FHRALP Trigger: CGGAAGTGCTCGATGAAACCATCCAAGTGGATTGCT...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGTCAAAGCAATCCACTTaGATGGTTTCATCGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WGVSRRPAKDTQRATVLMSKQST*MVSSST Trigger: AGTGCTCGATGAAACCATCCAAGTGGATTGCTTTGA...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTTGCTCACCATTCGCCTaGCCACTTCCCACAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFCSPFA*PLPTEQ Trigger: TTGTTCTGTGGGAAGTGGCCAGGCGAATGGTGAGCA...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTAACCACATCATAGAATaGTGGCTTGTAATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATVLMPRSPAGSFRVPPLNHIIE*WLVIFH Trigger: GTGGAAGATTACAAGCCACCATTCTATGATGTGGTT...AAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACATATCTTCAAAACTTaGGTCATTGGGAACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: RATVLMPRSPAGSFRVPPHIFKT*VIGNHI Trigger: GATGTGGTTCCCAATGACCCAAGTTTTGAAGATATG...TGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGTCAGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTCATATCTTCAAAACTTaGGTCATTGGGAACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: TSQASIRSQLDKDSIDSPHIFKT*VIGNHI Trigger: GATGTGGTTCCCAATGACCCAAGTTTTGAAGATATG...AGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCTGACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTCTTGCGGATGGGTTCTaGTACCAGCACTCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFLADGF*YQHSFI Trigger: GATGAAAGAGTGCTGGTATCAGAACCCATCCGCAAG...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTCTGGGAATGCATGACTaGCAGGCCCAAATCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFLGMHD*QAQICY Trigger: ATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAG...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCACCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGTCAAAGCAATCCACTTaGATGGTTTCATCGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPPDLPTVKSLWCEQFIESKQST*MVSSST Trigger: AGTGCTCGATGAAACCATCCAAGTGGATTGCTTTGA...CTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGGTGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGACACATCATAGAATGGTaGCTTGTAATCTTCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LEHGWEETSASVKAATSGHIIEW*LVIFHY Trigger: ATAGTGGAAGATTACAAGCCACCATTCTATGATGTG...TCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCCACATCATAGAATGGTaGCTTGTAATCTTCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSRRPAKDTQRATVLMPHIIEW*LVIFHY Trigger: ATAGTGGAAGATTACAAGCCACCATTCTATGATGTG...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTAGAGAAGAAAAACACTaGTGGCCTTCACAGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVKSLWCEQFIEGSSHSFREEKH*WPSQWS Trigger: GGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCT...AAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR GCA 90 bp | ACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTCCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVKSLWCEQFIEGSSHSFPNISM*KWARPL Trigger: CAGCGGCCTTGCCCATTTGCACATAGAGATATTTGG...AAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGCATACTCCACGTCTCTaGGGTTCAGGCGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVHTPRL*GSGALD Trigger: ATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATG...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTTTTCCCACATCAAGCTaGTTTGTGCTCTGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFFPTSS*FVLWEC Trigger: GCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAA...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGATTCTGTTCACATCATAGAATGGTaGCTTGTAATCTTCCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPSKQPLREGGQMDSVHIIEW*LVIFHY Trigger: ATAGTGGAAGATTACAAGCCACCATTCTATGATGTG...AACAGAATCCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGCTTGCGGATGGGTTCTaGTACCAGCACTCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVLADGF*YQHSFI Trigger: GATGAAAGAGTGCTGGTATCAGAACCCATCCGCAAG...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATATATCGGGTGGTGTTGCATGGGTAATGGCTAAATATGTTCTGCATACGAATGGGCAAGGCCGCTaGCTATGGACAGTACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SNISGGVAWVMAKYVLHTNGQGR*LWTVQS Trigger: GGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATT...CGTATGCAGAACATATTTAGCCATTACCCATGCAACACCACCCGATATATTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTAACCACATCATAGAATaGTGGCTTGTAATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPLSLCGVNSSSRARVTVNHIIE*WLVIFH Trigger: GTGGAAGATTACAAGCCACCATTCTATGATGTGGTT...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGCATATCTTCAAAACTTaGGTCATTGGGAACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: TVHRGLESQFLSEVRVVLHIFKT*VIGNHI Trigger: GATGTGGTTCCCAATGACCCAAGTTTTGAAGATATG...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTGATTACGAATTCACCGCCTCTGTTAGGTATGTTTaGCCTCTGTTGATCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVQRRVDAADIADYEFTASVRYV*PLLIHT Trigger: TGTGTGGATCAACAGAGGCCAAACATACCTAACAGA...GGCGGTGAATTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTGATTACGAAATGGCGGACTTCCCTTaGGTCCCAAATATCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TEFLVQRRVDAADIADYEMADFP*VPNISM Trigger: CATAGAGATATTTGGGACCCAAGGGAAGTCCGCCAT...TTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTTCAAAGCAATCCACTTaGATGGTTTCATCGAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFSKQST*MVSSST Trigger: AGTGCTCGATGAAACCATCCAAGTGGATTGCTTTGA...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTTTTTCTGTTAGGTATGTTTaGCCTCTGTTGATCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLSLCGVNSSSRARVTVFSVRYV*PLLIHT Trigger: TGTGTGGATCAACAGAGGCCAAACATACCTAACAGA...AAAAACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATATATCGGGTGGTGTTGCATGGGTAATGGCTAAATATGTTCTGCATACGTTTCCCACATCAAGCTaGTTTGTGCTCTGGGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SNISGGVAWVMAKYVLHTFPTSS*FVLWEC Trigger: GCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAA...CGTATGCAGAACATATTTAGCCATTACCCATGCAACACCACCCGATATATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR TCA 90 bp | ACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTGATTACGAATGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEFLVQRRVDAADIADYECKVSG*PWASHL Trigger: AAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACA...TTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTGATTACGAACATATCTTCAAAACTTaGGTCATTGGGAACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: TEFLVQRRVDAADIADYEHIFKT*VIGNHI Trigger: GATGTGGTTCCCAATGACCCAAGTTTTGAAGATATG...TTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATATATCGGGTGGTGTTGCATGGGTAATGGCTAAATATGTTCTGCATACGAACCACATCATAGAATaGTGGCTTGTAATCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNISGGVAWVMAKYVLHTNHIIE*WLVIFH Trigger: GTGGAAGATTACAAGCCACCATTCTATGATGTGGTT...CGTATGCAGAACATATTTAGCCATTACCCATGCAACACCACCCGATATATTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCGTCCCCACACGGGGGTaGTTTCCCACATCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPDRLQDLSGFLHFPPPCVPTRG*FPTSSW Trigger: CCAGCTTGATGTGGGAAACAACCCCCGTGTGGGGAC...GCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCAGCGACATTTTCGCCTaGCCAGCTGCCCCTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: CPDRLQDLSGFLHFPPPCSDIFA*PAAPPY Trigger: GTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGCT...GCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | ACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGGTGCTGTCTCCCACATaGGTGGTGATGAGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TASLSFPWGVSRRPAKDTVLSPT*VVMSPS Trigger: TGAAGGGCTCATCACCACCAATGTGGGAGACAGCAC...CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS CCA 90 bp | ACTTCTCCATACCGGCCCTTCCCGACACACTCCAACAGGGTTATCTaGCGAGCCACCGTTCTCTGTACCAGGAAAGGAAGACCGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSPYRPFPTHSNRVI*RATVLCTRKGRPEP Trigger: TGGCTCCGGTCTTCCTTTCCTGGTACAGAGAACGGTGGCTCGCCAGATAACCCTGTTGGAGTGTGTCGGGAAGGGCCGGTATGGAGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAGTCCCCACACGGGGGTaGTTTCCCACATCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LEHGWEETSASVKAATSGVPTRG*FPTSSW Trigger: CCAGCTTGATGTGGGAAACAACCCCCGTGTGGGGAC...TCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GAGGTTAGGGTGGTTTTGGTGTCTCCCCCTGGAACATGGCTGGGAAGAGACATCAGCGACATTTTCGCCTaGCCAGCTGCCCCTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: EVRVVLVSPPGTWLGRDISDIFA*PAAPPY Trigger: GTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGCT...GATGTCTCTTCCCAGCCATGTTCCAGGGGGAGACACCAAAACCACCCTAACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACGTCCCCACACGGGGGTaGTTTCCCACATCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPALGPSWTRTALTLLLDVPTRG*FPTSSW Trigger: CCAGCTTGATGTGGGAAACAACCCCCGTGTGGGGAC...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 90 bp | GTCCCCACACGGGGGTTGTTTCCCACATCAAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGGCCCAAATCTGCTATGCAGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPTRGLFPTSSWFVL*ECMTARPKSAMQHC Trigger: ACAGTGCTGCATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAACAACCCCCGTGTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAAGTTTCTGGTTGACCTaGGGCTTCTCATCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RSPAGSFRVPPLPSPLPPSFWLT*GFSSST Trigger: TGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACT...TGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGAGCGACATTTTCGCCTaGCCAGCTGCCCCTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: WGVSRRPAKDTQRATVLMSDIFA*PAAPPY Trigger: GTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGCT...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACAGCGACATTTTCGCCTaGCCAGCTGCCCCTCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: RPALGPSWTRTALTLLLDSDIFA*PAAPPY Trigger: GTATGGAGGGGCAGCTGGCAAGGCGAAAATGTCGCT...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCACTCAACATCACAGTGTaGTACAATTCCGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSPAGSFRVPPLPSPLPPLNITV*YNSVSL Trigger: CAGGGAGACGGAATTGTACAACACTGTGATGTTGAG...TGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCTCTTCCACTATACCATaGCTCACCATTCGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETRERYAESHCLNAQIACSSTIP*LTIRLA Trigger: GGCCAGGCGAATGGTGAGCAATGGTATAGTGGAAGA...GCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS TCA 90 bp | TCCCGCAGGAGAGGCCCTCACACACACACATGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTTCCACACTCGGGGAAGGGAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRRRGPHTHTCKVSG*PWASHLPHSGKGKP Trigger: TGGCTTTCCCTTCCCCGAGTGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACATGTGTGTGTGTGAGGGCCTCTCCTGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
||
| CDS GCA 90 bp | CGATGGGCAATGGCGGACTTCCCTTGGGTCCCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTGGCTATGGACAGTACAATCCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWAMADFPWVPNISM*KWARPLAMDSTIRR Trigger: CCTTCGGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATTTGCACATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATTGCCCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTCCCCACACGGGGGTaGTTTCCCACATCAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVHRGLESQFLSEVRVVLVPTRG*FPTSSW Trigger: CCAGCTTGATGTGGGAAACAACCCCCGTGTGGGGAC...CAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATGAACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | AGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCCCCTTGCCACCAATCAAAGCAATCCACTaGGATGGTTTCATCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPAGSFRVPPLPSPLPPIKAIH*DGFIEH Trigger: GTGCTCGATGAAACCATCCAAGTGGATTGCTTTGAT...TGGTGGCAAGGGGGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCTCTTCCACTATACCATaGCTCACCATTCGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSRRPAKDTQRATVLMPSSTIP*LTIRLA Trigger: GGCCAGGCGAATGGTGAGCAATGGTATAGTGGAAGA...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS CCA 90 bp | GCAATGGCGGACTTCCCTTGGGTCCCAAATATCTCTATGTGCAAATaGGCAAGGCCGCTGGCTATGGACAGTACAATCCGAAGGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AMADFPWVPNISMCK*ARPLAMDSTIRRQL Trigger: TAGCTGCCTTCGGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATTTGCACATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 90 bp | CATACTGCAAACACCACCGAGAGGATGATAAGGCCAACTTCCAGGTaGAAATTCTGTGTTCCGGGGAAGGACTTCCCTTTAGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTANTTERMIRPTSR*KFCVPGKDFPLVGS Trigger: GCTGCCCACTAAAGGGAAGTCCTTCCCCGGAACACAGAATTTCCACCTGGAAGTTGGCCTTATCATCCTCTCGGTGGTGTTTGCAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | CCAGACCTGCCCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTTTCTGGTTGACCTaGGGCTTCTCATCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PDLPTVKSLWCEQFIEGSSFWLT*GFSSST Trigger: TGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACT...CGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGGGCAGGTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | CTGGAACATGGCTGGGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGTTTCTGGTTGACCTaGGGCTTCTCATCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LEHGWEETSASVKAATSGSFWLT*GFSSST Trigger: TGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACT...TCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCCCAGCCATGTTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | GGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAATGGCGGACTTCCCTaGGGTCCCAAATATCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GVSRRPAKDTQRATVLMPNGGLP*GPKYLY Trigger: ATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATT...GGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | GTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTCCACTTCCCTCCTTCACCAGGATGTTTTaGCTCTTCAGATCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLMPRSPAGSFRVPPLPSFTRMF*LFRSRW Trigger: CCATCGAGATCTGAAGAGCAAAAACATCCTGGTGAA...GGAGGGAAGTGGAGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | ACCGCCTCCTTGAGCTTCCCGTGGGGAGTGTCTAGGAGACCCGCGAAAGATACGTTGGTCAAAGTCTTTTaGATACGTAGAGCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TASLSFPWGVSRRPAKDTLVKVF*IRRAVS Trigger: ACTCACAGCTCTACGTATCAAAAAGACTTTGACCAA...CGTATCTTTCGCGGGTCTCCTAGACACTCCCCACGGGAAGCTCAAGGAGGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGCTCAACATCACAGTGTaGTACAATTCCGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGVSRRPAKDTQRATVLMLNITV*YNSVSL Trigger: CAGGGAGACGGAATTGTACAACACTGTGATGTTGAG...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | GCGAAAGATACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTAATGGCGGACTTCCCTaGGGTCCCAAATATCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: AKDTQRATVLMPRSPAGSNGGLP*GPKYLY Trigger: ATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATT...AGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGTATCTTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | ACGCAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTATCAAAGCAATCCACTaGGATGGTTTCATCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQRATVLMPRSPAGSFRVIKAIH*DGFIEH Trigger: GTGCTCGATGAAACCATCCAAGTGGATTGCTTTGAT...AACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS TCA 90 bp | CATAAACCTGAAAGCAGCCCTTCTGGTAGACGTGGAAGCCATCGTTaGTGCTCAGAGAAGAAAAACACTGCTGGCCTTCACAGTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HKPESSPSGRRGSHR*CSEKKNTAGLHSGP Trigger: AGGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCTGAGCATCAACGATGGCTTCCACGTCTACCAGAAGGGCTGCTTTCAGGTTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
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| CDS-3UTR CAA 90 bp | CATCGAGGGCTCGAGTCACAGTTTTTGAGCGAGGTTAGGGTGGTTTTGGTGTCTAATGGCGGACTTCCCTaGGGTCCCAAATATCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HRGLESQFLSEVRVVLVSNGGLP*GPKYLY Trigger: ATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATT...AGACACCAAAACCACCCTAACCTCGCTCAAAAACTGTGACTCGAGCCCTCGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCATTAGGTCCCAGCTGGACAAGGACAGCATTGACTCTCCTTCTTGACTTCACCAGGATGTTTTaGCTCTTCAGATCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RPALGPSWTRTALTLLLDFTRMF*LFRSRW Trigger: CCATCGAGATCTGAAGAGCAAAAACATCCTGGTGAA...GTCAAGAAGGAGAGTCAATGCTGTCCTTGTCCAGCTGGGACCTAATGCTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGTTCACCAGGATGTTTTaGCTCTTCAGATCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: WGVSRRPAKDTQRATVLMFTRMF*LFRSRW Trigger: CCATCGAGATCTGAAGAGCAAAAACATCCTGGTGAA...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | TGGGGAGTGTCTAGGAGACCCGCGAAAGATACGCAGAGAGCCACTGTCTTAATGATCAAAGCAATCCACTaGGATGGTTTCATCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: WGVSRRPAKDTQRATVLMIKAIH*DGFIEH Trigger: GTGCTCGATGAAACCATCCAAGTGGATTGCTTTGAT...CATTAAGACAGTGGCTCTCTGCGTATCTTTCGCGGGTCTCCTAGACACTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | GGAAGAGACATCTGCTTCCGTCAAAGCAGCCACTTCGGGAAGGGGGTCAGATGGTTGGTCAAAGTCTTTTaGATACGTAGAGCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRDICFRQSSHFGKGVRWLVKVF*IRRAVS Trigger: ACTCACAGCTCTACGTATCAAAAAGACTTTGACCAA...CCATCTGACCCCCTTCCCGAAGTGGCTGCTTTGACGGAAGCAGATGTCTCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTCTCAACATCACAGTGTaGTACAATTCCGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLSLCGVNSSSRARVTVLNITV*YNSVSL Trigger: CAGGGAGACGGAATTGTACAACACTGTGATGTTGAG...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | CCACCGTTAAGTCTTTGTGGTGTGAACAGTTCATCGAGGGCTCGAGTCACAGTTAATGGCGGACTTCCCTaGGGTCCCAAATATCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLSLCGVNSSSRARVTVNGGLP*GPKYLY Trigger: ATAGAGATATTTGGGACCCAAGGGAAGTCCGCCATT...AACTGTGACTCGAGCCCTCGATGAACTGTTCACACCACAAAGACTTAACGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGAGCCACTGTCTTAATGCCCAGATCGCCTGCAGGATCTTTCCGGGTTCCTTTGGTCAAAGTCTTTTaGATACGTAGAGCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QRATVLMPRSPAGSFRVPLVKVF*IRRAVS Trigger: ACTCACAGCTCTACGTATCAAAAAGACTTTGACCAA...AGGAACCCGGAAAGATCCTGCAGGCGATCTGGGCATTAAGACAGTGGCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTAGTTTCTGGTTGACCTaGGGCTTCTCATCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QIEFLLSRDRPVEYAANVSFWLT*GFSSST Trigger: TGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACT...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS-3UTR CAA 90 bp | ACAGAATTCCTAGTGCAACGAAGAGTAGATGCAGCCGATATTGCTGATTACGAATCTTCCACTATACCATaGCTCACCATTCGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEFLVQRRVDAADIADYESSTIP*LTIRLA Trigger: GGCCAGGCGAATGGTGAGCAATGGTATAGTGGAAGA...TTCGTAATCAGCAATATCGGCTGCATCTACTCTTCGTTGCACTAGGAATTCTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGTCTTCCACTATACCATaGCTCACCATTCGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVSSTIP*LTIRLA Trigger: GGCCAGGCGAATGGTGAGCAATGGTATAGTGGAAGA...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGCTCAACATCACAGTGTaGTACAATTCCGTCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVLNITV*YNSVSL Trigger: CAGGGAGACGGAATTGTACAACACTGTGATGTTGAG...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS TCA 90 bp | AATGTCGGGTCTGAGAACCATCTGTTAGGTATGTTTGGCCTCTGTTaGTCCACACAGACAACTTTCCTCATATCTTCAAAACTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NVGSENHLLGMFGLC*STQTTFLISSKLGS Trigger: TGACCCAAGTTTTGAAGATATGAGGAAAGTTGTCTGTGTGGATCAACAGAGGCCAAACATACCTAACAGATGGTTCTCAGACCCGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | GGTACATTTTTGTGTTGCCAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGTTCACCAGGATGTTTTaGCTCTTCAGATCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GTFLCCQIEFLLSRDRPVFTRMF*LFRSRW Trigger: CCATCGAGATCTGAAGAGCAAAAACATCCTGGTGAA...CACTGGCCTGTCTCTGGATAATAGGAATTCAATCTGGCAACACAAAAATGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | CAGATTGAATTCCTATTATCCAGAGACAGGCCAGTGGAGTACGCAGCCAATGTTTTGGTCAAAGTCTTTTaGATACGTAGAGCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QIEFLLSRDRPVEYAANVLVKVF*IRRAVS Trigger: ACTCACAGCTCTACGTATCAAAAAGACTTTGACCAA...AACATTGGCTGCGTACTCCACTGGCCTGTCTCTGGATAATAGGAATTCAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS-3UTR CAA 90 bp | CATATGCACGAGGCGGTTTCAAACAAACCGCTAAGTGCACCAGTAATAAATAATATCAAAGCAATCCACTaGGATGGTTTCATCGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HMHEAVSNKPLSAPVINNIKAIH*DGFIEH Trigger: GTGCTCGATGAAACCATCCAAGTGGATTGCTTTGAT...ATTATTTATTACTGGTGCACTTAGCGGTTTGTTTGAAACCGCCTCGTGCATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
||
| CDS CCA 72 bp | AGCTGGGCCGTGATGTTCCTGTTACACCAGTCCCCTTaGCAGCACTCCACAGCCTGGCCAGGTGACGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SWAVMFLLHQSP*QHSTAWPGDGG Trigger: CCCGCCGTCACCTGGCCAGGCTGTGGAGTGCTGCCAAGGGGACTGGTGTAACAGGAACATCACGGCCCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
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| CDS CCA 72 bp | TACCGGCCCTTCCCGACACACTCCAACAGGGTTATCTaGCGAGCCACCGTTCTCTGTACCAGGAAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: YRPFPTHSNRVI*RATVLCTRKGR Trigger: TCTTCCTTTCCTGGTACAGAGAACGGTGGCTCGCCAGATAACCCTGTTGGAGTGTGTCGGGAAGGGCCGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 72 bp | ATGCTCAGAGAAGAAAAACACTGCTGGCCTTCACAGTaGTCCTCGTTCCCGCAGGAGAGGCCCTCACACACA | + |
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Preference number: 6 (lower is better) Translates to: MLREEKHCWPSQ*SSFPQERPSHT Trigger: TGTGTGTGAGGGCCTCTCCTGCGGGAACGAGGACCACTGTGAAGGCCAGCAGTGTTTTTCTTCTCTGAGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
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| CDS CCA 72 bp | CGGGGGTTGTTTCCCACATCAAGCTGGTTTGTGCTCTaGGAATGCATGACTGCCAGGCCCAAATCTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: RGLFPTSSWFVL*ECMTARPKSAM Trigger: CATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAACAACCCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS GCA 72 bp | ATGGCGGACTTCCCTTGGGTCCCAAATATCTCTATGTaGAAATGGGCAAGGCCGCTGGCTATGGACAGTACA | + |
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Preference number: 6 (lower is better) Translates to: MADFPWVPNISM*KWARPLAMDST Trigger: TGTACTGTCCATAGCCAGCGGCCTTGCCCATTTGCACATAGAGATATTTGGGACCCAAGGGAAGTCCGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CAA 72 bp | GGTACCATACTCCACGTCTCTGGGGTTCAGGCGCTCTaGATTGCGTCTCTTAAACTTCCTGAGAGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: GTILHVSGVQAL*IASLKLPESNS Trigger: GGAGTTGCTCTCAGGAAGTTTAAGAGACGCAATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CAA 90 bp | CCCTTCAATGGTACCATACTCCACGTCTCTGGGGTTCAGGCGCTCTaGATTGCGTCTCTTAAACTTCCTGAGAGCAACTCCAAGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: PFNGTILHVSGVQAL*IASLKLPESNSKDA Trigger: TGCATCCTTGGAGTTGCTCTCAGGAAGTTTAAGAGACGCAATCAAGAGCGCCTGAACCCCAGAGACGTGGAGTATGGTACCATTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS TCA 72 bp | AGAGGCCCTCACACACACACATGTAAAGTTTCTGGTTaGCCTTGGGCTTCTCATCTTCCACACTCGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGPHTHTCKVSG*PWASHLPHSGK Trigger: CTTCCCCGAGTGTGGAAGATGAGAAGCCCAAGGTCAACCAGAAACTTTACATGTGTGTGTGTGAGGGCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
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| CDS TCA 72 bp | GAAAGCAGCCCTTCTGGTAGACGTGGAAGCCATCGTTaGTGCTCAGAGAAGAAAAACACTGCTGGCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ESSPSGRRGSHR*CSEKKNTAGLH Trigger: GTGAAGGCCAGCAGTGTTTTTCTTCTCTGAGCATCAACGATGGCTTCCACGTCTACCAGAAGGGCTGCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 ENSMUST00000126407.2 |
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| CDS TCA 72 bp | AAAGGAAGACCGGAGCCACTTCCTGATGTACACGAGTaGTCTAGTAGTTCCGCTAGAGTGCTGTCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: KGRPEPLPDVHE*SSSSARVLSPT Trigger: TGTGGGAGACAGCACTCTAGCGGAACTACTAGATCACTCGTGTACATCAGGAAGTGGCTCCGGTCTTCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS GCA 72 bp | TTGTTTCCCACATCAAGCTGGTTTGTGCTCTGGGAATaGATGACTGCCAGGCCCAAATCTGCTATGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LFPTSSWFVLWE*MTARPKSAMQH Trigger: GTGCTGCATAGCAGATTTGGGCCTGGCAGTCATGCATTCCCAGAGCACAAACCAGCTTGATGTGGGAAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 72 bp | GACTTCCCTTGGGTCCCAAATATCTCTATGTGCAAATaGGCAAGGCCGCTGGCTATGGACAGTACAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: DFPWVPNISMCK*ARPLAMDSTIR Trigger: TCGGATTGTACTGTCCATAGCCAGCGGCCTTGCCCATTTGCACATAGAGATATTTGGGACCCAAGGGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 72 bp | AACACCACCGAGAGGATGATAAGGCCAACTTCCAGGTaGAAATTCTGTGTTCCGGGGAAGGACTTCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NTTERMIRPTSR*KFCVPGKDFPL Trigger: TAAAGGGAAGTCCTTCCCCGGAACACAGAATTTCCACCTGGAAGTTGGCCTTATCATCCTCTCGGTGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS CCA 72 bp | TGTAATCTTCCACTATACCATTGCTCACCATTCGCCTaGCCACTTCCCACAGAACAAGGCCAAAGGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: CNLPLYHCSPFA*PLPTEQGQRPK Trigger: TTTGGGCCTTTGGCCTTGTTCTGTGGGAAGTGGCCAGGCGAATGGTGAGCAATGGTATAGTGGAAGATTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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| CDS GCA 72 bp | GTCATGTCTGAAGCGATGAAACCTAAGATATTTTCATaGCTCAACATCACAGTGTTGTACAATTCCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VMSEAMKPKIFS*LNITVLYNSVS Trigger: GGAGACGGAATTGTACAACACTGTGATGTTGAGGCATGAAAATATCTTAGGTTTCATCGCTTCAGACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000056376.12 ENSMUST00000090935.9 ENSMUST00000112599.8 ENSMUST00000112601.9 |
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