Pregenerated sensors for ACTRT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037737Ensembl transcript IDs: ENSMUST00000047630.7
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAATAAAAACCATTCCCCAGCAGAAGGACCGGTTCAGCGATTTCTaGGCTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTACAACACC | + |
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Preference number: 1 (lower is better) Translates to: TIKTIPQQKDRFSDF*AVAISELWLISYNT Trigger: GGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGAAATCGCTGAACCGGTCCTTCTGCTGGGGAATGGTTTTTATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR GCA 90 bp | TGGCTCATCTCCTACAACACCCACCGTTATTGTTACATTGTTTCCTaGCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCAA | + |
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Preference number: 1 (lower is better) Translates to: WLISYNTHRYCYIVS*PVQKNPRKPGPKLQ Trigger: TTGCAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTAACAATAACGGTGGGTGTTGTAGGAGATGAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTGCAGACTACCTCGCCCATGCCCAGTCTACTTCTCTCTCTGCTTCGAACAGCTGTGGCGATTTCTaGGCTGTGGCTCATCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: CLADYLAHAQSTSLSASNSCGDF*AVAHLL Trigger: TAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCT...GTTCGAAGCAGAGAGAGAAGTAGACTGGGCATGGGCGAGGTAGTCTGCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR CAA 90 bp | GTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATaGCAACCTGTAATTCCAGTTTCCTGGGAGACTGAAGCACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSCPVQKNPRKPGPK*QPVIPVSWETEAQG Trigger: CCCTTGTGCTTCAGTCTCCCAGGAAACTGGAATTACAGGTTGCAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR CAA 90 bp | CTGAGCTGTGGCTCATCTCCTACAACACCCACCGTTATTGTTACATaGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSCGSSPTTPTVIVT*FPALFRRIQESQAQ Trigger: TTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTAACAATAACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR GCA 90 bp | ACCGGTTCAGCGATTTCTGAGCTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTTGTTACATTGTTTCCTaGCCTGTTCAGAAGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: TGSAISELWRFLSCGSSPCYIVS*PVQKNP Trigger: TGGATTCTTCTGAACAGGGCAGGAAACAATGTAACA...AGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGAAATCGCTGAACCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTCTCTCTGCTTCGAACTCTTCCAGATGCGTCTGGATTCTTTTCCCTATCGCGATTTCTGAGCTGTaGCTCATCTCCTACAACACC | + |
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Preference number: 2 (lower is better) Translates to: TSLSASNSSRCVWILFPIAISEL*LISYNT Trigger: GGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGC...GATAGGGAAAAGAATCCAGACGCATCTGGAAGAGTTCGAAGCAGAGAGAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTCTCTGCTTCGAACTCTTCCAGATGCGTCTGGATTCTTTTCCCTATCAGTAATTCCAGTTTCCTaGGAGACTGAAGCACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLSLLRTLPDASGFFSLSVIPVS*ETEAQG Trigger: CCCTTGTGCTTCAGTCTCCCAGGAAACTGGAATTAC...TGATAGGGAAAAGAATCCAGACGCATCTGGAAGAGTTCGAAGCAGAGAGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR TCA 72 bp | ACCATTCCCCAGCAGAAGGACCGGTTCAGCGATTTCTaGGCTGTGGCGATTTCTGAGCTGTGGCTCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: TIPQQKDRFSDF*AVAISELWLIS Trigger: GGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGAAATCGCTGAACCGGTCCTTCTGCTGGGGAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR TCA 72 bp | GGACCGGTTCAGCGATTTCTGAGCTGTGGCGATTTCTaGGCTGTGGCTCATCTCCTACAACACCCACCGTTA | + |
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Preference number: 3 (lower is better) Translates to: GPVQRFLSCGDF*AVAHLLQHPPL Trigger: TAACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGAAATCGCTGAACCGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR GCA 72 bp | CGCTCTCTCACACTGTCTTGCAGACTACCTCGCCCATaGCCAGTCTACTTCTCTCTCTGCTTCGAACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSLTLSCRLPRP*PVYFSLCFELF Trigger: GAAGAGTTCGAAGCAGAGAGAGAAGTAGACTGGGCATGGGCGAGGTAGTCTGCAAGACAGTGTGAGAGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGACTACCTCGCCCATGCCCAGTCTACTTCTCTCTCTGCTTCGAACTCTTCAACACCCACCGTTATaGTTACATTGTTTCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LQTTSPMPSLLLSLLRTLQHPPL*LHCFLP Trigger: GGGCAGGAAACAATGTAACAATAACGGTGGGTGTTG...AAGAGTTCGAAGCAGAGAGAGAAGTAGACTGGGCATGGGCGAGGTAGTCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR-3UTR CAA 90 bp | TTGCAGACTACCTCGCCCATGCCCAGTCTACTTCTCTCTCTGCTTCGAACTCTTAAGCCAGGCCCAAAATaGCAACCTGTAATTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: LQTTSPMPSLLLSLLRTLKPGPK*QPVIPV Trigger: AACTGGAATTACAGGTTGCAATTTTGGGCCTGGCTT...AAGAGTTCGAAGCAGAGAGAGAAGTAGACTGGGCATGGGCGAGGTAGTCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR GCA 72 bp | TCCTACAACACCCACCGTTATTGTTACATTGTTTCCTaGCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SYNTHRYCYIVS*PVQKNPRKPGP Trigger: TGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTAACAATAACGGTGGGTGTTGTAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| 3UTR TCA 72 bp | AAAATTGCAACCTGTAATTCCAGTTTCCTGGGAGACTaGAGCACAAGGGTTACAAGCTCTCAAATCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: KIATCNSSFLGD*STRVTSSQIQP Trigger: AGGCTGGATTTGAGAGCTTGTAACCCTTGTGCTTCAGTCTCCCAGGAAACTGGAATTACAGGTTGCAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR GCA 90 bp | CCTATCACATTCACAATAAAAACCATTCCCCAGCAGAAGGACCGGTTCAGCGATCCCACACACAGCTCCTaGCTGCTGTCCGCCGTATGG | + |
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Preference number: 4 (lower is better) Translates to: PITFTIKTIPQQKDRFSDPTHSS*LLSAVW Trigger: CCATACGGCGGACAGCAGGCAGGAGCTGTGTGTGGG...ATCGCTGAACCGGTCCTTCTGCTGGGGAATGGTTTTTATTGTGAATGTGATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR GCA 90 bp | TCTGAGCTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTACAACACCCACCGTTGGCAGGTGCCAGCTTTaGCACATCCTTAATGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SELWRFLSCGSSPTTPTVGRCQL*HILNES Trigger: CGACTCATTAAGGATGTGGCAAAGCTGGCACCTGCC...AACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR TCA 90 bp | TACATTGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCTGCGCTCCTGCGCTTaGTCACCCACACACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YIVSCPVQKNPRKPGPKLLRSCA*SPTHSS Trigger: GGAGCTGTGTGTGGGTGATCAAGCGCAGGAGCGCAG...CAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR TCA 90 bp | TCTGAGCTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTACAACACCCACCGTTACTGCTTATGGAGTTTaGCAGTCTTTCCATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SELWRFLSCGSSPTTPTVTAYGV*QSFHQA Trigger: TGCCTGATGGAAAGACTGTCAAACTCCATAAGCAGT...AACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR TCA 90 bp | GTTACATTGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATGTTCCACTGGATAGCTaGTGGATAGGAAGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTLFPALFRRIQESQAQNVPLDS*WIGSSC Trigger: GCAGGAGCTTCCTATCCATCAGCTATCCAGTGGAAC...ATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR TCA 90 bp | ACTTCTCTCTCTGCTTCGAACTCTTCCAGATGCGTCTGGATTCTTTTCCCTATCCAAATTCTGCAGCCGTaGTCCACATGTCTTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: TSLSASNSSRCVWILFPIQILQP*STCLGR Trigger: CCTTCCAAGACATGTGGATCACGGCTGCAGAATTTG...GATAGGGAAAAGAATCCAGACGCATCTGGAAGAGTTCGAAGCAGAGAGAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CCA 90 bp | GTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCAACCTGTAATTCCAGTTCCTGTACGGCAGTATTaGCAGGTGCCAGCTTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VQKNPRKPGPKLQPVIPVPVRQY*QVPALP Trigger: TGGCAAAGCTGGCACCTGCCAATACTGCCGTACAGG...AACTGGAATTACAGGTTGCAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR TCA 90 bp | CTTCTCTCTCTGCTTCGAACTCTTCCAGATGCGTCTGGATTCTTTTCCCTATCAATCCTCCCGAAAGGATaGTATTGGAGAAGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LLSLLRTLPDASGFFSLSILPKG*YWRRRS Trigger: ACTCCTTCTTCTCCAATATCATCCTTTCGGGAGGAT...TGATAGGGAAAAGAATCCAGACGCATCTGGAAGAGTTCGAAGCAGAGAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR GCA 90 bp | TACATTGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCACATTTCATTATGCTaGCGAAGCACATCTTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: YIVSCPVQKNPRKPGPKLHISLC*RSTSCR Trigger: TCGACAAGATGTGCTTCGGCAGCATAATGAAATGTG...CAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR GCA 90 bp | GTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCAACCTGTAATTCCAGTTAACTTCTTCAAATTCTaGAGCCGTGATCCACATGTC | + |
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Preference number: 4 (lower is better) Translates to: VQKNPRKPGPKLQPVIPVNFFKF*SRDPHV Trigger: GACATGTGGATCACGGCTGCAGAATTTGAAGAAGTT...AACTGGAATTACAGGTTGCAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR GCA 90 bp | TACATTGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGTATCACATTTCATTATaGTGCCGAAGCACATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YIVSCPVQKNPRKPGPKLYHISL*CRSTSC Trigger: ACAAGATGTGCTTCGGCAGCATAATGAAATGTGATA...CAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CCA 90 bp | TTGCATTTTAATGTACCTTTAAACACGTTTATCCCAACGGAACTTCCCAATGACAACATTCACAAGATATaGAGAAAAGAGGGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LHFNVPLNTFIPTELPNDNIHKI*RKEGLW Trigger: CCAGAGGCCCTCTTTTCTCCATATCTTGTGAATGTT...GTCATTGGGAAGTTCCGTTGGGATAAACGTGTTTAAAGGTACATTAAAATGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS TCA 90 bp | TCGGGTAGACAAACTGGGGCTCCCGGGTCCCAGCCAGGCCCGCCTTaGTCATTCCCGAGCCGTTGTCGATCACCACTGGTGGCTGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: SGRQTGAPGSQPGPP*SFPSRCRSPLVAGS Trigger: GCTACCAGCCACCAGTGGTGATCGACAACGGCTCGGGAATGATCAAGGCGGGCCTGGCTGGGACCCGGGAGCCCCAGTTTGTCTACCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS GCA 90 bp | AGCTCCTGCGCTCCTGCGCTTGATCACCCACACACAGCTCCTGCCTaGTGTCCGCCGTATGGCCCTTGGACCGGCCCAGAATATTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSCAPALDHPHTAPA*CPPYGPWTGPEYSG Trigger: ACCCGAATATTCTGGGCCGGTCCAAGGGCCATACGGCGGACAGCAGGCAGGAGCTGTGTGTGGGTGATCAAGCGCAGGAGCGCAGGAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | CTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTACAACACCCACCGTTATTGTTCCAGCCAGGCCCGCCTaGATCATTCCCGAGCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: LWRFLSCGSSPTTPTVIVPARPA*IIPEPL Trigger: CAACGGCTCGGGAATGATCAAGGCGGGCCTGGCTGG...AACAATAACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | CTGTGGCGATTTCTGAGCTGTGGCTCATCTCCTACAACACCCACCGTTATTGTTATCATTCCCGAGCCGTaGTCGATCACCACTGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: LWRFLSCGSSPTTPTVIVIIPEP*SITTGG Trigger: GCCACCAGTGGTGATCGACAACGGCTCGGGAATGAT...AACAATAACGGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | ACTTCTCTCTCTGCTTCGAACTCTTCCAGATGCGTCTGGATTCTTTTCCCTATCCGTGATCCACATGTCTaGGAAGGCAGACAAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TSLSASNSSRCVWILFPIRDPHV*EGRQGG Trigger: GCCTCCTTGTCTGCCTTCCAAGACATGTGGATCACG...GATAGGGAAAAGAATCCAGACGCATCTGGAAGAGTTCGAAGCAGAGAGAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS GCA 90 bp | AAAGCATCTCTGGTGTACAATGTTGGGTCCAACTTCTTCAAATTCTaGAGCCGTGATCCACATGTCTTGGAAGGCAGACAAGGAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: KASLVYNVGSNFFKF*SRDPHVLEGRQGGK Trigger: CTTGCCTCCTTGTCTGCCTTCCAAGACATGTGGATCACGGCTGCAGAATTTGAAGAAGTTGGACCCAACATTGTACACCAGAGATGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | TGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATTGCAACCCCCGAAAGGATGATATaGGAGAAGAAGGAGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: CFLPCSEESKKARPKIATPERMI*EKKEFL Trigger: CAGGAACTCCTTCTTCTCCAATATCATCCTTTCGGG...GGTTGCAATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS GCA 90 bp | GATCTGTATCACATTTCATTATGCTGCCGAAGCACATCTTGTCGATaGCCGGAGCATCAACATTCACAAGATATGGAGAAAAGAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: DLYHISLCCRSTSCR*PEHQHSQDMEKRGP Trigger: AGGCCCTCTTTTCTCCATATCTTGTGAATGTTGATGCTCCGGGCATCGACAAGATGTGCTTCGGCAGCATAATGAAATGTGATACAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | TTGCATTTTAATGTACCTTTAAACACGTTTATCCCAACGGAACTTCCCAATGACACCTGTACGGCAGTATaGGCAGGTGCCAGCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LHFNVPLNTFIPTELPNDTCTAV*AGASFA Trigger: GGCAAAGCTGGCACCTGCCAATACTGCCGTACAGGT...GTCATTGGGAAGTTCCGTTGGGATAAACGTGTTTAAAGGTACATTAAAATGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS TCA 90 bp | GCATCAACATTCACAAGATATGGAGAAAAGAGGGCCTCTGGGCAATaGAATAACTGCTTATGGAGTTTGACAGTCTTTCCATCAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASTFTRYGEKRASGQ*NNCLWSLTVFPSGR Trigger: CCTGCCTGATGGAAAGACTGTCAAACTCCATAAGCAGTTATTTCATTGCCCAGAGGCCCTCTTTTCTCCATATCTTGTGAATGTTGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS-3UTR CAA 90 bp | GTTACATTGTTTCCTGCCCTGTTCAGAAGAATCCAAGAAAGCCAGGCCCAAAATCTCTGGTGTACAATGTaGGGTCCAACTTCTTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VTLFPALFRRIQESQAQNLWCTM*GPTSSN Trigger: ATTTGAAGAAGTTGGACCCAACATTGTACACCAGAG...ATTTTGGGCCTGGCTTTCTTGGATTCTTCTGAACAGGGCAGGAAACAATGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS TCA 72 bp | CAAACTGGGGCTCCCGGGTCCCAGCCAGGCCCGCCTTaGTCATTCCCGAGCCGTTGTCGATCACCACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QTGAPGSQPGPP*SFPSRCRSPLV Trigger: CACCAGTGGTGATCGACAACGGCTCGGGAATGATCAAGGCGGGCCTGGCTGGGACCCGGGAGCCCCAGTTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS GCA 72 bp | GCTCCTGCGCTTGATCACCCACACACAGCTCCTGCCTaGTGTCCGCCGTATGGCCCTTGGACCGGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: APALDHPHTAPA*CPPYGPWTGPE Trigger: TTCTGGGCCGGTCCAAGGGCCATACGGCGGACAGCAGGCAGGAGCTGTGTGTGGGTGATCAAGCGCAGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CCA 72 bp | CACACAGCTCCTGCCTGCTGTCCGCCGTATGGCCCTTaGACCGGCCCAGAATATTCGGGTAGACAAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: HTAPACCPPYGP*TGPEYSGRQTG Trigger: CCCAGTTTGTCTACCCGAATATTCTGGGCCGGTCCAAGGGCCATACGGCGGACAGCAGGCAGGAGCTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CAA 72 bp | TTCCTTTCCGGGGGAGCTATAACCTGTACGGCAGTATaGGCAGGTGCCAGCTTTGCCACATCCTTAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLSGGAITCTAV*AGASFATSLMS Trigger: ACTCATTAAGGATGTGGCAAAGCTGGCACCTGCCAATACTGCCGTACAGGTTATAGCTCCCCCGGAAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS TCA 72 bp | CAATGTTGGGTCCAACTTCTTCAAATTCTGCAGCCGTaGTCCACATGTCTTGGAAGGCAGACAAGGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: QCWVQLLQILQP*STCLGRQTRRQ Trigger: TTGCCTCCTTGTCTGCCTTCCAAGACATGTGGATCACGGCTGCAGAATTTGAAGAAGTTGGACCCAACATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CAA 90 bp | ACTGATATTTTCCTTTCCGGGGGAGCTATAACCTGTACGGCAGTATaGGCAGGTGCCAGCTTTGCCACATCCTTAATGAGTCGCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: TDIFLSGGAITCTAV*AGASFATSLMSRLS Trigger: AGATAAGCGACTCATTAAGGATGTGGCAAAGCTGGCACCTGCCAATACTGCCGTACAGGTTATAGCTCCCCCGGAAAGGAAAATATCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS GCA 72 bp | CACATTTCATTATGCTGCCGAAGCACATCTTGTCGATaGCCGGAGCATCAACATTCACAAGATATGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HISLCCRSTSCR*PEHQHSQDMEK Trigger: TTTCTCCATATCTTGTGAATGTTGATGCTCCGGGCATCGACAAGATGTGCTTCGGCAGCATAATGAAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CAA 72 bp | CCAGGAAAAGACGTTGATCCTCCCGAAAGGATGATATaGGAGAAGAAGGAGTTCCTGAGATCTGTATCACAT | + |
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Preference number: 6 (lower is better) Translates to: PGKDVDPPERMI*EKKEFLRSVSH Trigger: ATGTGATACAGATCTCAGGAACTCCTTCTTCTCCAATATCATCCTTTCGGGAGGATCAACGTCTTTTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CAA 90 bp | TTCCTGAGATCTGTATCACATTTCATTATGCTGCCGAAGCACATCTaGTCGATGCCCGGAGCATCAACATTCACAAGATATGGAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: FLRSVSHFIMLPKHI*SMPGASTFTRYGEK Trigger: CTTTTCTCCATATCTTGTGAATGTTGATGCTCCGGGCATCGACAAGATGTGCTTCGGCAGCATAATGAAATGTGATACAGATCTCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS TCA 72 bp | TTCACAAGATATGGAGAAAAGAGGGCCTCTGGGCAATaGAATAACTGCTTATGGAGTTTGACAGTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FTRYGEKRASGQ*NNCLWSLTVFP Trigger: TGGAAAGACTGTCAAACTCCATAAGCAGTTATTTCATTGCCCAGAGGCCCTCTTTTCTCCATATCTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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| CDS CAA 90 bp | TTATCTAAACCAGGAAAAGACGTTGATCCTCCCGAAAGGATGATATaGGAGAAGAAGGAGTTCCTGAGATCTGTATCACATTTCATTATG | + |
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Preference number: 6 (lower is better) Translates to: LSKPGKDVDPPERMI*EKKEFLRSVSHFIM Trigger: CATAATGAAATGTGATACAGATCTCAGGAACTCCTTCTTCTCCAATATCATCCTTTCGGGAGGATCAACGTCTTTTCCTGGTTTAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047630.7 |
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