Pregenerated sensors for ACTR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037761Ensembl transcript IDs: ENSMUST00000045644.9, ENSMUST00000183731.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCAGCCCCACTTCCACTGGCGCTGGAGCCTCGGCCGGAAGTCTaGGTCTCTGAGGCACGTGAGGCCTGCTTAGGCAGGCGGATGGGG | + |
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Preference number: 1 (lower is better) Translates to: SPAPLPLALEPRPEV*VSEAREACLGRRMG Trigger: CCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTCAGAGACGCAGACTTCCGGCCGAGGCTCCAGCGCCAGTGGAAGTGGGGCTGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR GCA 90 bp | CTGGAGCCTCGGCCGGAAGTCTGCGTCTCTGAGGCACGTGAGGCCTaGTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGCAATGT | + |
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Preference number: 1 (lower is better) Translates to: LEPRPEVCVSEAREA*LGRRMGTYVLEAQC Trigger: ACATTGCGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTCAGAGACGCAGACTTCCGGCCGAGGCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR TCA 90 bp | TCACGGGCACCGTACCACGCATCCAGCACAGGGTTCGAGGCGAGCTaGACCTGGAAGGAGGACTGGAAGGGCCTCATCTCCAGCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: SRAPYHASSTGFEAS*TWKEDWKGLISSSS Trigger: GGAGCTGCTGGAGATGAGGCCCTTCCAGTCCTCCTTCCAGGTTCAGCTCGCCTCGAACCCTGTGCTGGATGCGTGGTACGGTGCCCGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 90 bp | ATCACCTGCTCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTaGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: ITCSPLLGSQGRSSH*PNKAVRPRQHHGAL Trigger: CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGAGCAGGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR GCA 90 bp | TCAGACCCAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTaGCTCCATGGCAAGGGTGAAGCACAAGGTCATCTGGCGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: SDPGSTMGHCPCPKH*LHGKGEAQGHLASP Trigger: GGGGGACGCCAGATGACCTTGTGCTTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGGTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR CCA 90 bp | ATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATaGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: IQSLAKQGCQTQAAP*GTVLVPNTASMARV Trigger: CACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR CCA 90 bp | GGGCCTCATCTCCAGCAGCTCCTTCTCCACTCGGGCCTTCATGCCTaGGTACATCACGTTCCCACCGGTAAGGAAAACGTTCTGAACCAG | + |
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Preference number: 1 (lower is better) Translates to: GPHLQQLLLHSGLHA*VHHVPTGKENVLNQ Trigger: CTGGTTCAGAACGTTTTCCTTACCGGTGGGAACGTGATGTACCCAGGCATGAAGGCCCGAGTGGAGAAGGAGCTGCTGGAGATGAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR GCA 90 bp | CGGAGCACGGATCCTCTCTGTCCCAACAGACAGCTGATGATACGCTaGCAAGTTAAACACGGGCTGGACTGTGGTGACTTGCGGCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: RSTDPLCPNRQLMIR*QVKHGLDCGDLRLL Trigger: GAGAAGCCGCAAGTCACCACAGTCCAGCCCGTGTTTAACTTGGCAGCGTATCATCAGCTGTCTGTTGGGACAGAGAGGATCCGTGCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 90 bp | AGGGTCTCTGCAATCCCCGCCTGCTCCTCTCCTATGAGGGATGGCTaGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCAACAGAC | + |
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Preference number: 1 (lower is better) Translates to: RVSAIPACSSPMRDG*KIISGARILSVPTD Trigger: GTCTGTTGGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAGGAGCAGGCGGGGATTGCAGAGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 90 bp | ATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCTCCTATGAGGGATaGCTGGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: MEGLCNPRLLLSYEG*LENNLRSTDPLCPN Trigger: GTTGGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAGGAGCAGGCGGGGATTGCAGAGACCCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR TCA 90 bp | GAGGCAGAGGCAGGAGAAAATTTGAAGCCAGTCAGAGCTGTAGAGTaGGAACAGCATTCTCATGAGAACAAACAACTCGGCACTCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: EAEAGENLKPVRAVE*EQHSHENKQLGTPG Trigger: TCCTGGAGTGCCGAGTTGTTTGTTCTCATGAGAATGCTGTTCTCACTCTACAGCTCTGACTGGCTTCAAATTTTCTCCTGCCTCTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGGAGGCACGTGAGGCCTaGTTAGGCAGGCGGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: LGSQGRSSHWPNKAVRPREAREA*LGRRMG Trigger: CCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTC...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCACGTGAGGCCTGCTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGTGGACTGTGGTGACTTaGGGCTTCTCCACTTCGGGC | + |
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Preference number: 2 (lower is better) Translates to: EAREACLGRRMGTYVLEAWTVVT*GFSTSG Trigger: GCCCGAAGTGGAGAAGCCGCAAGTCACCACAGTCCA...CGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGCCTGATCACCAGCCCCACTTCCACTGGCGCTGGAGCCTCGGCCGGAAGCCAGGGTGTCCTGAATaGCCTTTGGGTACCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ARPDHQPHFHWRWSLGRKPGCPE*PLGTCP Trigger: TGGACAGGTACCCAAAGGCCATTCAGGACACCCTGG...CTTCCGGCCGAGGCTCCAGCGCCAGTGGAAGTGGGGCTGGTGATCAGGCCTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCACGTGAGGCCTGCTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGCATAGTCCTTCCTGGTaGCCCAGGCTCCACTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: EAREACLGRRMGTYVLEAHSPSW*PRLHCL Trigger: AAGACAGTGGAGCCTGGGTCACCAGGAAGGACTATG...CGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCGCTGGGCTTCACCGGTaGCTTGCAGGGCCCACACTA | + |
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Preference number: 2 (lower is better) Translates to: SPLLGSQGRSSHWPNKAVAGLHR*LAGPTL Trigger: TAGTGTGGGCCCTGCAAGGCACCGGTGAAGCCCAGC...GACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCTCCATGGCAAGGGTaGAGCACAAGGTCATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LCWAPRGDPVTGQTRLSDPPWQG*STRSSG Trigger: GCCAGATGACCTTGTGCTTCACCCTTGCCATGGAGG...GTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCCCTCCATGGCAAGGGTaGAGCACAAGGTCATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SPLLGSQGRSSHWPNKAVPPWQG*STRSSG Trigger: GCCAGATGACCTTGTGCTTCACCCTTGCCATGGAGG...GACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTGCTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGCAATGTTCCTTGCCACTGTCTTCTAGGTaGTCCAAGGCCCAGTCACGG | + |
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Preference number: 2 (lower is better) Translates to: ACLGRRMGTYVLEAQCSLPLSSR*SKAQSR Trigger: CCGTGACTGGGCCTTGGATCACCTAGAAGACAGTGG...CAAGGAACATTGCGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CAA 90 bp | TCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTaGGTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: SLTAEEGSPPACPQF*VPEATVSFTEVDHL Trigger: CAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCATGTGTTAATTCAGCCTaGAGTCCACAGCTGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GLPGEIQSLAKQGCQTQACVNSA*SPQLGF Trigger: GAAGCCCAGCTGTGGACTGCAGGCTGAATTAACACA...TGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCGGGAGATCCAGTCACTaGCCAAACAAGGCTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: WVPVQDKMEGLCNPRLLLGRSSH*PNKAVR Trigger: TCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCC...GAGGAGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCTTCAGCTGATGATACGCTaGCAAGTTAAACACGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HFSLQLFPSLLRKAVPQLQLMIR*QVKHGL Trigger: CAGCCCGTGTTTAACTTGGCAGCGTATCATCAGCTG...AAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTATGAGGGATGGCTGGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCGGACGTAGGGAATGCTaGTTCAAACTCCCGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SYEGWLENNLRSTDPLCPGRREC*FKLPAS Trigger: GCTAGCCGGGAGTTTGAACCAGCATTCCCTACGTCC...GGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCTTAACAAAACAAAACAGTaGAAAGAGCAGCACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HFSLQLFPSLLRKAVPQLNKTKQ*KEQHCP Trigger: TGGGCAGTGCTGCTCTTTGCACTGTTTTGTTTTGTT...AAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTAACAAAACAAAACAGTaGAAAGAGCAGCACTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: PLGTCPGQNGGSLQSPPANKTKQ*KEQHCP Trigger: TGGGCAGTGCTGCTCTTTGCACTGTTTTGTTTTGTT...AGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | CCCCCTGCTAGGCCTGATCACCAGCCCCACTTCCACTaGCGCTGGAGCCTCGGCCGGAAGTCTGCGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PPARPDHQPHFH*RWSLGRKSASL Trigger: CAGAGACGCAGACTTCCGGCCGAGGCTCCAGCGCCAGTGGAAGTGGGGCTGGTGATCAGGCCTAGCAGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR GCA 72 bp | CCACTTCCACTGGCGCTGGAGCCTCGGCCGGAAGTCTaGGTCTCTGAGGCACGTGAGGCCTGCTTAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PLPLALEPRPEV*VSEAREACLGR Trigger: CCTGCCTAAGCAGGCCTCACGTGCCTCAGAGACGCAGACTTCCGGCCGAGGCTCCAGCGCCAGTGGAAGTGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | GCTAGGCCTGATCACCAGCCCCACTTCCACTGGCGCTaGAGCCTCGGCCGGAAGTCTGCGTCTCTGAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: ARPDHQPHFHWR*SLGRKSASLRH Trigger: GTGCCTCAGAGACGCAGACTTCCGGCCGAGGCTCCAGCGCCAGTGGAAGTGGGGCTGGTGATCAGGCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR GCA 72 bp | CGGCCGGAAGTCTGCGTCTCTGAGGCACGTGAGGCCTaGTTAGGCAGGCGGATGGGGACGTACGTGTTGGAG | + |
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Preference number: 3 (lower is better) Translates to: RPEVCVSEAREA*LGRRMGTYVLE Trigger: CTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTCAGAGACGCAGACTTCCGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGAGGCAGTCCCCCAGCTaGTCCACAGTTCTTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: LGSQGRSSHWPNKAVRPRRQSPS*STVLGA Trigger: GGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCT...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGGCTTGTCCACAGTTCTaGGTGCCAGAGGCCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: LGSQGRSSHWPNKAVRPRACPQF*VPEATV Trigger: CACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGC...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTaGCCAAACAAGGCTGTCAGACCCAGGCAGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: SPLLGSQGRSSH*PNKAVRPRQHH Trigger: ATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | CTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATaGGGCACTGTCCTTGTCCCAAACACTGCCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: LAKQGCQTQAAP*GTVLVPNTASM Trigger: CATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR TCA 72 bp | ACAGTTCTTGGTGCCAGAGGCCACTGTGTCCTTCACTaGGGTAGATCACCTGCTCTCCTCTGCTGGGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: TVLGARGHCVLH*GRSPALLCWAP Trigger: GGGAGCCCAGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR TCA 72 bp | CTGCCCACTTCTCCCTCCAGCTGTTTCCCTCACTGCTaGGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LPTSPSSCFPHC*GRQSPSLSTVL Trigger: AAGAACTGTGGACAAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAGTGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR GCA 72 bp | GGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTaGCTCCATGGCAAGGGTGAAGCACAAGGTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: GSTMGHCPCPKH*LHGKGEAQGHL Trigger: CAGATGACCTTGTGCTTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| 3UTR GCA 72 bp | GCTGCCAAGTTAAACACGGGCTGGACTGTGGTGACTTaGGGCTTCTCCACTTCGGGCGTTTCCTCCGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: AAKLNTGWTVVT*GFSTSGVSSEN Trigger: GTTCTCGGAGGAAACGCCCGAAGTGGAGAAGCCGCAAGTCACCACAGTCCAGCCCGTGTTTAACTTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | CGGCTAGCTGTGTTAATTCAGCCTGCAGTCCACAGCTaGGCTTCACCGGTGCCTTGCAGGGCCCACACTATT | + |
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Preference number: 3 (lower is better) Translates to: RLAVLIQPAVHS*ASPVPCRAHTI Trigger: AATAGTGTGGGCCCTGCAAGGCACCGGTGAAGCCCAGCTGTGGACTGCAGGCTGAATTAACACAGCTAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | GCAATCCCCGCCTGCTCCTCTCCTATGAGGGATGGCTaGAAAATAATCTCCGGAGCACGGATCCTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: AIPACSSPMRDG*KIISGARILSV Trigger: GACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAGGAGCAGGCGGGGATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | CTCTGCAATCCCCGCCTGCTCCTCTCCTATGAGGGATaGCTGGAAAATAATCTCCGGAGCACGGATCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LCNPRLLLSYEG*LENNLRSTDPL Trigger: GAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAGGAGCAGGCGGGGATTGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR CCA 72 bp | CTCCAGCAGCTCCTTCTCCACTCGGGCCTTCATGCCTaGGTACATCACGTTCCCACCGGTAAGGAAAACGTT | + |
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Preference number: 3 (lower is better) Translates to: LQQLLLHSGLHA*VHHVPTGKENV Trigger: AACGTTTTCCTTACCGGTGGGAACGTGATGTACCCAGGCATGAAGGCCCGAGTGGAGAAGGAGCTGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR GCA 72 bp | GATCCTCTCTGTCCCAACAGACAGCTGATGATACGCTaGCAAGTTAAACACGGGCTGGACTGTGGTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: DPLCPNRQLMIR*QVKHGLDCGDL Trigger: CAAGTCACCACAGTCCAGCCCGTGTTTAACTTGGCAGCGTATCATCAGCTGTCTGTTGGGACAGAGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| 3UTR TCA 72 bp | GCAGGAGAAAATTTGAAGCCAGTCAGAGCTGTAGAGTaGGAACAGCATTCTCATGAGAACAAACAACTCGGC | + |
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Preference number: 3 (lower is better) Translates to: AGENLKPVRAVE*EQHSHENKQLG Trigger: GCCGAGTTGTTTGTTCTCATGAGAATGCTGTTCTCACTCTACAGCTCTGACTGGCTTCAAATTTTCTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGAGCCGGCGCAGCTGCTaGTGCCGCCGCTCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LGSQGRSSHWPNKAVRPRSRRSC*CRRSCF Trigger: GAAGCAGGAGCGGCGGCAGCAGCAGCTGCGCCGGCT...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGCACACGGCGCGGAACTaGAGGCGAGGCTCGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: GEIQSLAKQGCQTQAAPWHTARN*RRGSGP Trigger: CGGTCCCGAGCCTCGCCTGCAGTTCCGCGCCGTGTG...CCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | GCCTGCTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGCAATGTTCCTTGCACACGGCGCGGAACTaGAGGCGAGGCTCGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: ACLGRRMGTYVLEAQCSLHTARN*RRGSGP Trigger: CGGTCCCGAGCCTCGCCTGCAGTTCCGCGCCGTGTG...CAAGGAACATTGCGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCCTCCGCCGTCAGTGTaGTGCCCAGGAGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFSLQLFPSLLRKAVPQPPPSV*CPGACW Trigger: CCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGG...CTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAGTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCAGCCGGCGCAGCTGCTaGTGCCGCCGCTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVPVQDKMEGLCNPRLLLSRRSC*CRRSCF Trigger: GAAGCAGGAGCGGCGGCAGCAGCAGCTGCGCCGGCT...GAGGAGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | AGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGTGAATGCAGCCGGCGCAGCTaGTGCTGCCGCCGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STMGHCPCPKHCLHGKGECSRRS*CCRRSC Trigger: GCAGGAGCGGCGGCAGCAGCAGCTGCGCCGGCTGCA...TTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTGCTCTCCTCTGCTTGCAGCCGGCGCAGCTaGTGCTGCCGCCGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPEATVSFTEVDHLLSSACSRRS*CCRRSC Trigger: GCAGGAGCGGCGGCAGCAGCAGCTGCGCCGGCTGCA...AGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCCACCCGGCCCGAGCCTaGAACGACCCGTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLGSQGRSSHWPNKAVHPARA*NDPLSS Trigger: GCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTG...GACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGCTTAGGCAGGCGGATGGGGACGTACGTGTTGGAGGCGCAATGTTCCTTGCCTCCGCCGTCAGTGTaGTGCCCAGGAGCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACLGRRMGTYVLEAQCSLPPPSV*CPGACW Trigger: CCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGG...CAAGGAACATTGCGCCTCCAACACGTACGTCCCCATCCGCCTGCCTAAGCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGAGAGGCACGTGAGGCCTaGTTAGGCAGGCGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSQGRSSHWPNKAVREAREA*LGRRMG Trigger: CCCCATCCGCCTGCCTAAGCAGGCCTCACGTGCCTC...TCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGGGGTTCGAGGCGAGCTaGACCTGGAAGGAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHWPNKAVRPRQHHGALGFEAS*TWKEDW Trigger: CCAGTCCTCCTTCCAGGTTCAGCTCGCCTCGAACCC...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTCCGCCGTCAGTGTGCTaGCCAGGAGCTTGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKAVPQLVHSSWCQRPLCPPSVC*PGACWR Trigger: TCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGG...ACACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCCGCCTGCTCCTCTCCTATGAGGGATGGCTGGAAAATAATCTCCGGAGCACACCCGGCCCGAGCCTaGAACGACCCGTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPACSSPMRDGWKIISGAHPARA*NDPLSS Trigger: GCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTG...TGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAGGAGCAGGCGGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGGTGATGGCTGCCAGGTaGCCTGGATACTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHFSLQLFPSLLRKAVPQVMAAR*PGYFSW Trigger: CCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCAC...CTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAGTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGTGCCCAGGAGCTTGCTaGAGAACGGGAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSQGRSSHWPNKAVRPRCPGAC*RTGAAS Trigger: AGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCA...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAACCACTGTCTTCTAGGTaGTCCAAGGCCCAGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PRQHHGALSLSQTLPPWQPLSSR*SKAQSR Trigger: CCGTGACTGGGCCTTGGATCACCTAGAAGACAGTGG...TTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR TCA 90 bp | CTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCATAGTCCTTCCTGGTaGCCCAGGCTCCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSQGRSSHWPNKAVRPRHSPSW*PRLHCL Trigger: AAGACAGTGGAGCCTGGGTCACCAGGAAGGACTATG...CCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR GCA 90 bp | CAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGTCCAGCAGCAGTTCCTaGAGTTCCAGGTTGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPWGTVLVPNTASMARSSSSS*SSRLTG Trigger: CCCGGTCAACCTGGAACTGCAGGAACTGCTGCTGGA...CCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCACAGGGGTCTCTGGCTTaGTGTCTACCACATCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPGEIQSLAKQGCQTQAQGSLA*CLPHPP Trigger: AGGTGGATGTGGTAGACAGCAAGCCAGAGACCCCTG...TGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACTGGACTGTGGTGACTTaGGGCTTCTCCACTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCWAPRGDPVTGQTRLSDWTVVT*GFSTSG Trigger: GCCCGAAGTGGAGAAGCCGCAAGTCACCACAGTCCA...GTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGTCTCCACATCCTCCATaGTGGGTTCCAGCGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEIQSLAKQGCQTQAAPWSPHPP*WVPAAP Trigger: TGGAGCCGCTGGAACCCACCATGGAGGATGTGGAGA...CCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGACCTGGAAGGAGGACTaGAAGGGCCTCATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSHWPNKAVRPRQHHGALTWKED*KGLISS Trigger: GCTGGAGATGAGGCCCTTCCAGTCCTCCTTCCAGGT...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR TCA 90 bp | AGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGTGAACGGGCTGGACTGTGGTaGCTTGCGGCTTCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: STMGHCPCPKHCLHGKGERAGLW*LAASPL Trigger: AAGTGGAGAAGCCGCAAGTCACCACAGTCCAGCCCG...TTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCTTGTGGCTGCCAGGTGGCCTaGATACTTCAGCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPAVSLTAEEGSPPACGCQVA*ILQLEK Trigger: CTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCC...ACAAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTGGCTGCCAGGTGGCCTaGATACTTCAGCTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKAVPQLVHSSWCQRPLCGCQVA*ILQLEK Trigger: CTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCC...ACACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTGCTCTCCTCTGCTGGGCTCGTGATGGCTGCCAGGTaGCCTGGATACTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EATVSFTEVDHLLSSAGLVMAAR*PGYFSW Trigger: CCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCAC...GAGCCCAGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | TGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCTGCCCAGGAGCTTGCTaGAGAACGGGAGCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WVPVQDKMEGLCNPRLLLCPGAC*RTGAAS Trigger: AGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCA...GAGGAGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCCAGGTCAGGGGTCTCTaGCTTGCTGTCTACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SPLLGSQGRSSHWPNKAVQVRGL*LAVYHI Trigger: GATGTGGTAGACAGCAAGCCAGAGACCCCTGACCTG...GACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR CCA 90 bp | CAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGTCCCAGGGTGTCCTGAATaGCCTTTGGGTACCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLAKQGCQTQAAPWGTVPGCPE*PLGTCP Trigger: TGGACAGGTACCCAAAGGCCATTCAGGACACCCTGG...GACAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR TCA 90 bp | GAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTGCTCTCCTCTGCTGGGCTCGTCAGAACTATGGGATaGTCAACGCAGCCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EATVSFTEVDHLLSSAGLVRTMG*STQPCE Trigger: CTCGCAGGGCTGCGTTGATCATCCCATAGTTCTGAC...GAGCCCAGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTGCTCTCCTCTGCTTCCAGCAGCAGTTCCTaGAGTTCCAGGTTGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPEATVSFTEVDHLLSSASSSSS*SSRLTG Trigger: CCCGGTCAACCTGGAACTGCAGGAACTGCTGCTGGA...AGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGTCCTGCAGGTAGCCAGCTaGCTGACTTCCTCCAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QSLAKQGCQTQAAPWGTVLQVAS*LTSSKI Trigger: AATCTTGGAGGAAGTCAGGCAGCTGGCTACCTGCAG...GACAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | TGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACCCGCCGTCAGTGTGCTaGCCAGGAGCTTGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPQFLVPEATVSFTEVDHPPSVC*PGACWR Trigger: TCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGG...GTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGTGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| 3UTR CAA 72 bp | GCTGAGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTaGGTGCCAGAGGCCACTGTGTCCTTCACTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AEEGSPPACPQF*VPEATVSFTEV Trigger: TACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCTTCCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR TCA 90 bp | CAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGTCCGTTGTGGTAGAAGCTaGAGAGGCTGTCTATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLAKQGCQTQAAPWGTVRCGRS*RGCLSH Trigger: ATGGGATAGACAGCCTCTTCAGCTTCTACCACAACG...GACAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGCTGGAGAACGGGAGCTaGATCTTGTGGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHWPNKAVRPRQHHGALLENGS*ILWTLF Trigger: GAACAATGTCCACAAGATGCAGCTCCCGTTCTCCAG...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR GCA 90 bp | CCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACAGCTGATGATACGCTaGCAAGTTAAACACGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSQGRSSHWPNKAVRQLMIR*QVKHGL Trigger: CAGCCCGTGTTTAACTTGGCAGCGTATCATCAGCTG...TCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR CCA 90 bp | GGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGCCTCTGTCAGAACTATaGGATGATCAACGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEIQSLAKQGCQTQAAPWPLSEL*DDQRSP Trigger: AGGGCTGCGTTGATCATCCCATAGTTCTGACAGAGG...CCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCCCTCTGTCAGAACTATaGGATGATCAACGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLLGSQGRSSHWPNKAVPLSEL*DDQRSP Trigger: AGGGCTGCGTTGATCATCCCATAGTTCTGACAGAGG...GACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCCTCCAGCTGTTTCCCTCACTGCTGAGGAAGGCAGTCCCCCAGCTTGTGGACTGCAGTTCTTCTaGGGAGTCCATGTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPAVSLTAEEGSPPACGLQFF*GVHVQL Trigger: GAGCTGAACATGGACTCCCCAGAAGAACTGCAGTCC...ACAAGCTGGGGGACTGCCTTCCTCAGCAGTGAGGGAAACAGCTGGAGGGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CCA 90 bp | GTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACCTGCTCTCCTCTGCTGCAGGATTTTCTGTTTaGCCTGCTCCACCGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPEATVSFTEVDHLLSSAAGFSV*PAPPPR Trigger: CCTTGGCGGTGGAGCAGGCCAAACAGAAAATCCTGC...AGCAGAGGAGAGCAGGTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGACTTCCTCCAAGATTaGTGCGCTTGCAGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAAPWGTVLVPNTASMARDFLQD*CACSFW Trigger: CCAAAAACTGCAAGCGCATCAATCTTGGAGGAAGTC...CCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGTCGATCAGAGCTTTGTaGAACTGGTCCATCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAPWGTVLVPNTASMARSIRAL*NWSICP Trigger: AGGACAGATGGACCAGTTTCACAAAGCTCTGATCGA...CCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGTCGATCAGAGCTTTGTaGAACTGGTCCATCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEIQSLAKQGCQTQAAPWSIRAL*NWSICP Trigger: AGGACAGATGGACCAGTTTCACAAAGCTCTGATCGA...CCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGAAGGCTCGAAATCACTaGTGTTCTCCACATCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHWPNKAVRPRQHHGALKARNH*CSPHPP Trigger: TGGAGGATGTGGAGAACATCAGTGATTTCGAGCCTT...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
||
| CDS-3UTR TCA 90 bp | GATGGCTGGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCAACAGACAGCGTCAGAACTATGGGATaGTCAACGCAGCCCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGWKIISGARILSVPTDSVRTMG*STQPCE Trigger: CTCGCAGGGCTGCGTTGATCATCCCATAGTTCTGAC...GCTGTCTGTTGGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCTGGAGAACGGGAGCTaGATCTTGTGGACATTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLGTCPGQNGGSLQSPPALENGS*ILWTLF Trigger: GAACAATGTCCACAAGATGCAGCTCCCGTTCTCCAG...AGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACTCTGCAATCCCCGCCTaGTCCTCTCCTATGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPQFLVPEATVSFTEVDHSAIPA*SSPMRD Trigger: ATCCCTCATAGGAGAGGAGCAGGCGGGGATTGCAGA...GTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR CCA 90 bp | AGGAAGGCAGTCCCCCAGCTTGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTCCTATGAGGGATGGCTaGAAAATAATCTCCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RKAVPQLVHSSWCQRPLCPMRDG*KIISGA Trigger: TGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGG...ACACAGTGGCCTCTGGCACCAAGAACTGTGGACAAGCTGGGGGACTGCCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR CCA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGATTGTGGCAATACTCTaGCTTGCTGTCTACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: SSHWPNKAVRPRQHHGALIVAIL*LAVYHI Trigger: GATGTGGTAGACAGCAAGCCAGAGTATTGCCACAAT...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | TGTCCACAGTTCTTGGTGCCAGAGGCCACTGTGTCCTTCACTGAGGTAGATCACTGCGCTTGCAGTTTTTaGCATCGAGCCTCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPQFLVPEATVSFTEVDHCACSF*HRASLP Trigger: TGGAAGGGAGGCTCGATGCCAAAAACTGCAAGCGCA...GTGATCTACCTCAGTGAAGGACACAGTGGCCTCTGGCACCAAGAACTGTGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | AGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGTGAACTCTCCTATGAGGGATaGCTGGAAAATAATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: STMGHCPCPKHCLHGKGELSYEG*LENNLR Trigger: CCGGAGATTATTTTCCAGCCATCCCTCATAGGAGAG...TTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS-3UTR TCA 90 bp | GATGGCTGGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCAACAGACAGCCGTTGTGGTAGAAGCTaGAGAGGCTGTCTATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGWKIISGARILSVPTDSRCGRS*RGCLSH Trigger: ATGGGATAGACAGCCTCTTCAGCTTCTACCACAACG...GCTGTCTGTTGGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | TTCCTCCGAGAACAAAGGCTCGAAATCACTGATGTTCTCCACATCCTCCATGGTGCAGGATTTTCTGTTTaGCCTGCTCCACCGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLREQRLEITDVLHILHGAGFSV*PAPPPR Trigger: CCTTGGCGGTGGAGCAGGCCAAACAGAAAATCCTGC...ACCATGGAGGATGTGGAGAACATCAGTGATTTCGAGCCTTTGTTCTCGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS-3UTR CCA 90 bp | TTCCTCCGAGAACAAAGGCTCGAAATCACTGATGTTCTCCACATCCTCCATGGTGGACTGCAGTTCTTCTaGGGAGTCCATGTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLREQRLEITDVLHILHGGLQFF*GVHVQL Trigger: GAGCTGAACATGGACTCCCCAGAAGAACTGCAGTCC...ACCATGGAGGATGTGGAGAACATCAGTGATTTCGAGCCTTTGTTCTCGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS CCA 90 bp | TCGGGACCGGGGTCCGGCCCGGGGCACGCCCACCCGGCCCGAGCCTaGAACGACCCGTTGTCCAGCACCAGAGGCACCGGCTGCGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGPGSGPGHAHPARA*NDPLSSTRGTGCDP Trigger: CGGGTCGCAGCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTGGGCGTGCCCCGGGCCGGACCCCGGTCCCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS GCA 90 bp | GCCCGAGCCTGGAACGACCCGTTGTCCAGCACCAGAGGCACCGGCTaGGACCCGAAGGCCACCGGCCCGGCTTCGAGCACGGGATCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARAWNDPLSSTRGTG*DPKATGPASSTGSG Trigger: TCCGGATCCCGTGCTCGAAGCCGGGCCGGTGGCCTTCGGGTCGCAGCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGCTCGGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS GCA 90 bp | TTCTCCTCCCTCCGCCGGGCGTTGAGCTCTTGCAGCCGGCGCAGCTaGTGCTGCCGCCGCTCCTGCTTCTCCTCCGCCGTCAGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSLRRALSSCSRRS*CCRRSCFSSAVSVL Trigger: CAGCACACTGACGGCGGAGGAGAAGCAGGAGCGGCGGCAGCAGCAGCTGCGCCGGCTGCAAGAGCTCAACGCCCGGCGGAGGGAGGAGAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGAGGCTTCCCAGCGCGTaGCCCACCTGCGGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSHWPNKAVRPRQHHGALRLPSA*PTCGPG Trigger: GCCGGGGCCGCAGGTGGGCAACGCGCTGGGAAGCCT...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAACCGGGCGTTGAGCTCTaGCAGCCGGCGCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRQHHGALSLSQTLPPWQPGVEL*QPAQLL Trigger: CAGCAGCTGCGCCGGCTGCAAGAGCTCAACGCCCGG...TTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTGGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCGGGCGTTGAGCTCTaGCAGCCGGCGCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCWAPRGDPVTGQTRLSDPGVEL*QPAQLL Trigger: CAGCAGCTGCGCCGGCTGCAAGAGCTCAACGCCCGG...GTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCCAGCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGCCTGGAACGACCCGTaGTCCAGCACCAGAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PRQHHGALSLSQTLPPWQAWNDP*SSTRGT Trigger: GGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGC...TTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | TCCTATGAGGGATGGCTGGAAAATAATCTCCGGAGCACGGATCCTCTCTGTCCCAGGCTTCCCAGCGCGTaGCCCACCTGCGGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SYEGWLENNLRSTDPLCPRLPSA*PTCGPG Trigger: GCCGGGGCCGCAGGTGGGCAACGCGCTGGGAAGCCT...GGGACAGAGAGGATCCGTGCTCCGGAGATTATTTTCCAGCCATCCCTCATAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGAGGTTGACCGGGACGTaGCGATCGAAGGGCGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QAAPWGTVLVPNTASMARRLTGT*RSKGER Trigger: GCGCTCGCCCTTCGATCGCAACGTCCCGGTCAACCT...CCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCTGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS TCA 90 bp | GGTGCTGGAAGCTGTAGTCCAGCAGCAGTTCCTGCAGTTCCAGGTTaGCCGGGACGTTGCGATCGAAGGGCGAGCGCAGCATCCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGSCSPAAVPAVPG*PGRCDRRASAASSA Trigger: TGCGCTGGATGCTGCGCTCGCCCTTCGATCGCAACGTCCCGGTCAACCTGGAACTGCAGGAACTGCTGCTGGACTACAGCTTCCAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CCA 90 bp | CAGGATCTCCTCCATGCGGCTGAGTGTGATGGCTGCCAGGTGGCCTaGATACTTCAGCTGGAGAAGCCGCTGCAGGTAGCCAGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDLLHAAECDGCQVA*ILQLEKPLQVASCL Trigger: CAGGCAGCTGGCTACCTGCAGCGGCTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCACACTCAGCCGCATGGAGGAGATCCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCGCCTGGAACGACCCGTaGTCCAGCACCAGAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WVPVQDKMEGLCNPRLLLAWNDP*SSTRGT Trigger: GGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGC...GAGGAGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCCAGGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCATCAGGGGTCTCTGGCTaGCTGTCTACCACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLPGEIQSLAKQGCQTQASGVSG*LSTTST Trigger: GGTGGATGTGGTAGACAGCAAGCCAGAGACCCCTGA...TGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCCTGGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045644.9 |
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| CDS GCA 90 bp | GCTATGCTCCTGCAGGATCTCCTCCATGCGGCTGAGTGTGATGGCTaGCAGGTGGCCTGGATACTTCAGCTGGAGAAGCCGCTGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AMLLQDLLHAAECDG*QVAWILQLEKPLQV Trigger: TACCTGCAGCGGCTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCACACTCAGCCGCATGGAGGAGATCCTGCAGGAGCATAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS GCA 90 bp | GCCGCTCCTGCTTCTCCTCCGCCGTCAGTGTGCTGCCCAGGAGCTTaGTGGAGAACGGGAGCTGCATCTTGTGGACATTGTTCTCGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAPASPPPSVCCPGA*WRTGAASCGHCSRS Trigger: ACTACGAGAACAATGTCCACAAGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGGAGAAGCAGGAGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGGGCACTGTGCAGGATTTTCTGTTaGGCCTGCTCCACCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHWPNKAVRPRQHHGALCRIFC*ACSTAK Trigger: CTTGGCGGTGGAGCAGGCCAAACAGAAAATCCTGCA...CAGTGCCCCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS TCA 90 bp | GGAGAAGCCGCTGCAGGTAGCCAGCTGCCTGACTTCCTCCAAGATTaGTGCGCTTGCAGTTTTTGGCATCGAGCCTCCCTTCCAAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: GEAAAGSQLPDFLQD*CACSFWHRASLPRP Trigger: CGGTCTTGGAAGGGAGGCTCGATGCCAAAAACTGCAAGCGCATCAATCTTGGAGGAAGTCAGGCAGCTGGCTACCTGCAGCGGCTTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | TGGGTTCCAGCGGCTCCAGGTCAGGGGTCTTTAATCCCAGCACTCAGGAGGCAGTGGCAATACTCTGGCTaGCTGTCTACCACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WVPAAPGQGSLIPALRRQWQYSG*LSTTST Trigger: GGTGGATGTGGTAGACAGCAAGCCAGAGTATTGCCA...CTGCCTCCTGAGTGCTGGGATTAAAGACCCCTGACCTGGAGCCGCTGGAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS CCA 90 bp | GCTCCTGCTTCTCCTCCGCCGTCAGTGTGCTGCCCAGGAGCTTGCTaGAGAACGGGAGCTGCATCTTGTGGACATTGTTCTCGTAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: APASPPPSVCCPGAC*RTGAASCGHCSRSN Trigger: ATTACTACGAGAACAATGTCCACAAGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGGAGAAGCAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGATCCAGTCACTGGCCAAACAAGGCTGTCAGACCCAGGCAGCACCATGGCCAAGATTGATGCGCTaGCAGTTTTTGGCATCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEIQSLAKQGCQTQAAPWPRLMR*QFLASS Trigger: GCTCGATGCCAAAAACTGCAAGCGCATCAATCTTGG...CCATGGTGCTGCCTGGGTCTGACAGCCTTGTTTGGCCAGTGACTGGATCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | AGCACCATGGGGCACTGTCCTTGTCCCAAACACTGCCTCCATGGCAAGGGTGAATGCAGGATTTTCTGTTaGGCCTGCTCCACCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: STMGHCPCPKHCLHGKGECRIFC*ACSTAK Trigger: CTTGGCGGTGGAGCAGGCCAAACAGAAAATCCTGCA...TTCACCCTTGCCATGGAGGCAGTGTTTGGGACAAGGACAGTGCCCCATGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS GCA 90 bp | GTGGCCTGGATACTTCAGCTGGAGAAGCCGCTGCAGGTAGCCAGCTaGCTGACTTCCTCCAAGATTGATGCGCTTGCAGTTTTTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: VAWILQLEKPLQVAS*LTSSKIDALAVFGI Trigger: GATGCCAAAAACTGCAAGCGCATCAATCTTGGAGGAAGTCAGGCAGCTGGCTACCTGCAGCGGCTTCTCCAGCTGAAGTATCCAGGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS-3UTR CAA 90 bp | TGGGTACCTGTCCAGGACAAAATGGAGGGTCTCTGCAATCCCCGCCTGCTCCTCCCAAGATTGATGCGCTaGCAGTTTTTGGCATCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVPVQDKMEGLCNPRLLLPRLMR*QFLASS Trigger: GCTCGATGCCAAAAACTGCAAGCGCATCAATCTTGG...GAGGAGCAGGCGGGGATTGCAGAGACCCTCCATTTTGTCCTGGACAGGTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183731.8 |
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| CDS CCA 90 bp | CTCCACCGCCAAGGTGAGCTTCTGTATGTAGGACTGCAGTTCTTCTaGGGAGTCCATGTTCAGCTCGATCAGAGCTTTGTGAAACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHRQGELLYVGLQFF*GVHVQLDQSFVKLV Trigger: GACCAGTTTCACAAAGCTCTGATCGAGCTGAACATGGACTCCCCAGAAGAACTGCAGTCCTACATACAGAAGCTCACCTTGGCGGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CCA 72 bp | GGGTCCGGCCCGGGGCACGCCCACCCGGCCCGAGCCTaGAACGACCCGTTGTCCAGCACCAGAGGCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGPGHAHPARA*NDPLSSTRGTG Trigger: GCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTGGGCGTGCCCCGGGCCGGACCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS CAA 90 bp | TCCGGCCCGGGGCACGCCCACCCGGCCCGAGCCTGGAACGACCCGTaGTCCAGCACCAGAGGCACCGGCTGCGACCCGAAGGCCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGPGHAHPARAWNDP*SSTRGTGCDPKATG Trigger: GCCGGTGGCCTTCGGGTCGCAGCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTGGGCGTGCCCCGGGCCGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS CAA 72 bp | GGGCACGCCCACCCGGCCCGAGCCTGGAACGACCCGTaGTCCAGCACCAGAGGCACCGGCTGCGACCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GHAHPARAWNDP*SSTRGTGCDPK Trigger: CTTCGGGTCGCAGCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCAGGCTCGGGCCGGGTGGGCGTGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS GCA 72 bp | TGGAACGACCCGTTGTCCAGCACCAGAGGCACCGGCTaGGACCCGAAGGCCACCGGCCCGGCTTCGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: WNDPLSSTRGTG*DPKATGPASST Trigger: CGTGCTCGAAGCCGGGCCGGTGGCCTTCGGGTCGCAGCCGGTGCCTCTGGTGCTGGACAACGGGTCGTTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CCA 72 bp | CTCCATGCGGCTGAGTGTGATGGCTGCCAGGTGGCCTaGATACTTCAGCTGGAGAAGCCGCTGCAGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHAAECDGCQVA*ILQLEKPLQVA Trigger: GGCTACCTGCAGCGGCTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCACACTCAGCCGCATGGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CAA 72 bp | AGCAGCAGTTCCTGCAGTTCCAGGTTGACCGGGACGTaGCGATCGAAGGGCGAGCGCAGCATCCAGCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSCSSRLTGT*RSKGERSIQRR Trigger: TCTGCGCTGGATGCTGCGCTCGCCCTTCGATCGCAACGTCCCGGTCAACCTGGAACTGCAGGAACTGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS GCA 72 bp | CTGCAGGATCTCCTCCATGCGGCTGAGTGTGATGGCTaGCAGGTGGCCTGGATACTTCAGCTGGAGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQDLLHAAECDG*QVAWILQLEKP Trigger: CGGCTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCACACTCAGCCGCATGGAGGAGATCCTGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CCA 72 bp | ATCTCCTCCATGCGGCTGAGTGTGATGGCTGCCAGGTaGCCTGGATACTTCAGCTGGAGAAGCCGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISSMRLSVMAAR*PGYFSWRSRCR Trigger: CCTGCAGCGGCTTCTCCAGCTGAAGTATCCAGGCCACCTGGCAGCCATCACACTCAGCCGCATGGAGGAGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS TCA 72 bp | AGGGGGTTACACACAGCCTCTGTCAGAACTATGGGATaGTCAACGCAGCCCTGCGAGGAGACGCCGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLHTASVRTMG*STQPCEETPRC Trigger: GCACCTCGGCGTCTCCTCGCAGGGCTGCGTTGATCATCCCATAGTTCTGACAGAGGCTGTGTGTAACCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CAA 72 bp | TGCTTCTCCTCCGCCGTCAGTGTGCTGCCCAGGAGCTaGCTGGAGAACGGGAGCTGCATCTTGTGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: CFSSAVSVLPRS*LENGSCILWTL Trigger: CAATGTCCACAAGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGGAGAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS CCA 72 bp | TCTCCTCCGCCGTCAGTGTGCTGCCCAGGAGCTTGCTaGAGAACGGGAGCTGCATCTTGTGGACATTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPPPSVCCPGAC*RTGAASCGHCS Trigger: AGAACAATGTCCACAAGATGCAGCTCCCGTTCTCCAGCAAGCTCCTGGGCAGCACACTGACGGCGGAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS TCA 72 bp | GCTGCAGGTAGCCAGCTGCCTGACTTCCTCCAAGATTaGTGCGCTTGCAGTTTTTGGCATCGAGCCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAGSQLPDFLQD*CACSFWHRASL Trigger: AAGGGAGGCTCGATGCCAAAAACTGCAAGCGCATCAATCTTGGAGGAAGTCAGGCAGCTGGCTACCTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
||
| CDS TCA 72 bp | GCAGGATTTTCTGTTTGGCCTGCTCCACCGCCAAGGTaGGCTTCTGTATGTAGGACTGCAGTTCTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGFSVWPAPPPR*ASVCRTAVLLG Trigger: CCCCAGAAGAACTGCAGTCCTACATACAGAAGCTCACCTTGGCGGTGGAGCAGGCCAAACAGAAAATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS GCA 72 bp | ATACTTCAGCTGGAGAAGCCGCTGCAGGTAGCCAGCTaGCTGACTTCCTCCAAGATTGATGCGCTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ILQLEKPLQVAS*LTSSKIDALAV Trigger: AACTGCAAGCGCATCAATCTTGGAGGAAGTCAGGCAGCTGGCTACCTGCAGCGGCTTCTCCAGCTGAAGTAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS TCA 72 bp | TGGAAAGGGCATTCTTGGGCACGTTGTGGTAGAAGCTaGAGAGGCTGTCTATCCCATAGGCAACCTTCGGGA | + |
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Preference number: 6 (lower is better) Translates to: WKGHSWARCGRS*RGCLSHRQPSG Trigger: TCCCGAAGGTTGCCTATGGGATAGACAGCCTCTTCAGCTTCTACCACAACGTGCCCAAGAATGCCCTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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| CDS CCA 72 bp | CAAGGTGAGCTTCTGTATGTAGGACTGCAGTTCTTCTaGGGAGTCCATGTTCAGCTCGATCAGAGCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QGELLYVGLQFF*GVHVQLDQSFV Trigger: CACAAAGCTCTGATCGAGCTGAACATGGACTCCCCAGAAGAACTGCAGTCCTACATACAGAAGCTCACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045644.9 ENSMUST00000183731.8 |
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