Pregenerated sensors for ACTR3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056367Ensembl transcript IDs: ENSMUST00000088244.6, ENSMUST00000128727.8
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTaGTCACACACCCATTCCACACTGCTATGTACAGGAGCCGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LLGRPCLAPLAMKAR*SHTHSTLLCTGAVA Trigger: AGCCACGGCTCCTGTACATAGCAGTGTGGAATGGGTGTGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR TCA 90 bp | GATAAATGGCTTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATaGAAGCACGCTGCTCACACACCCATTCCACACTGCTATGTACAG | + |
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Preference number: 1 (lower is better) Translates to: DKWLYWEDRAWPHWR*KHAAHTPIPHCYVQ Trigger: CTGTACATAGCAGTGTGGAATGGGTGTGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAAGCCATTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR CCA 90 bp | TTCCTGGAGAAACCACTGCATCCTCTAGTAGTTTCTACAGTTGCATaGACGCCTTCAGAGCTACACTTGACTAGAATCTCGGGTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: FLEKPLHPLVVSTVA*TPSELHLTRISGGK Trigger: CTTTCCACCCGAGATTCTAGTCAAGTGTAGCTCTGAAGGCGTCCATGCAACTGTAGAAACTACTAGAGGATGCAGTGGTTTCTCCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR CCA 90 bp | GATGTCACACCACCCCAACAACATGTAATCACTTCCCAGCAGACATaGCATAAAGCCTGCACACACATCAGAACATGCCTCACAATCAAG | + |
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Preference number: 1 (lower is better) Translates to: DVTPPQQHVITSQQT*HKACTHIRTCLTIK Trigger: CTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCTTTATGCCATGTCTGCTGGGAAGTGATTACATGTTGTTGGGGTGGTGTGACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR GCA 90 bp | CCCCAACAACATGTAATCACTTCCCAGCAGACATGGCATAAAGCCTaGACACACATCAGAACATGCCTCACAATCAAGTACTTTATTACA | + |
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Preference number: 1 (lower is better) Translates to: PQQHVITSQQTWHKA*THIRTCLTIKYFIT Trigger: TGTAATAAAGTACTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCTTTATGCCATGTCTGCTGGGAAGTGATTACATGTTGTTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR-3UTR CCA 90 bp | AAAATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAAGAGCCGTGGCTGCTCTaGGTTCTGAAGGACACTTAT | + |
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Preference number: 2 (lower is better) Translates to: KIGWEGQGSSTLQSFLEKEPWLL*VLKDTY Trigger: ATAAGTGTCCTTCAGAACCCAGAGCAGCCACGGCTC...TTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGCAATAGTATTTCATCCCGCACTCAACAACATTAAACCATTGTCTTCTGAGCCGTGGCTGCTCTaGGTTCTGAAGGACACTTAT | + |
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Preference number: 2 (lower is better) Translates to: NSAIVFHPALNNIKPLSSEPWLL*VLKDTY Trigger: ATAAGTGTCCTTCAGAACCCAGAGCAGCCACGGCTC...AGAAGACAATGGTTTAATGTTGTTGAGTGCGGGATGAAATACTATTGCACTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR-3UTR CCA 90 bp | AATCAAGTACTTTATTACAGAACTCTGACATCCATGAACTCTGTGACTACTCATCCTTACAGTCTTTCCTaGAGAAACCACTGCATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NQVLYYRTLTSMNSVTTHPYSLS*RNHCIL Trigger: GAGGATGCAGTGGTTTCTCCAGGAAAGACTGTAAGG...ATGAGTAGTCACAGAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR TCA 72 bp | CTTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATaGAAGCACGCTGCTCACACACCCATTCCACACTGC | + |
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Preference number: 3 (lower is better) Translates to: LYWEDRAWPHWR*KHAAHTPIPHC Trigger: GCAGTGTGGAATGGGTGTGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR TCA 72 bp | TTTCTACAGTTGCATGGACGCCTTCAGAGCTACACTTaGCTAGAATCTCGGGTGGAAAGGAGAGAGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: FLQLHGRLQSYT*LESRVERRESG Trigger: CCCACTCTCTCTCCTTTCCACCCGAGATTCTAGTCAAGTGTAGCTCTGAAGGCGTCCATGCAACTGTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR CCA 72 bp | CCACCCCAACAACATGTAATCACTTCCCAGCAGACATaGCATAAAGCCTGCACACACATCAGAACATGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PPQQHVITSQQT*HKACTHIRTCL Trigger: GAGGCATGTTCTGATGTGTGTGCAGGCTTTATGCCATGTCTGCTGGGAAGTGATTACATGTTGTTGGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTACAAAAATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTTCCCCAACAGGACACTaGTCAGACAATGGCTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: FIYKNRLGRPGFLHLTVFSPTGH*SDNGSN Trigger: GTTGGAGCCATTGTCTGACAAGTGTCCTGTTGGGGA...AAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTATTTTTGTAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR GCA 72 bp | CATGTAATCACTTCCCAGCAGACATGGCATAAAGCCTaGACACACATCAGAACATGCCTCACAATCAAGTAC | + |
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Preference number: 3 (lower is better) Translates to: HVITSQQTWHKA*THIRTCLTIKY Trigger: GTACTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCTTTATGCCATGTCTGCTGGGAAGTGATTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| 3UTR CCA 72 bp | AAACCACTGCATCCTCTAGTAGTTTCTACAGTTGCATaGACGCCTTCAGAGCTACACTTGACTAGAATCTCG | + |
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Preference number: 3 (lower is better) Translates to: KPLHPLVVSTVA*TPSELHLTRIS Trigger: CGAGATTCTAGTCAAGTGTAGCTCTGAAGGCGTCCATGCAACTGTAGAAACTACTAGAGGATGCAGTGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR GCA 72 bp | CAGAACTCTGACATCCATGAACTCTGTGACTACTCATaGTTAGCATTAGCTGGTTATACCAAATACCATAAA | + |
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Preference number: 3 (lower is better) Translates to: QNSDIHELCDYS*LALAGYTKYHK Trigger: TTTATGGTATTTGGTATAACCAGCTAATGCTAAGCATGAGTAGTCACAGAGTTCATGGATGTCAGAGTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGGCTGCATGTGGTGCGTaGCCACCTGCACCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: GWEGQGSSTLQSFLEKPLAACGA*PPAPPQ Trigger: CTGTGGAGGTGCAGGTGGTCACGCACCACATGCAGC...CAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | TTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACATGGTGCGTGACCACCTaGACCTCCACAGGTTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: FTGKTVPGPTGDESTLLTWCVTT*TSTGLG Trigger: GCCTAAACCTGTGGAGGTGCAGGTGGTCACGCACCA...TGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | TTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACATGCCAGAGCCAGCACTaGCTGTACTGCAATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: FTGKTVPGPTGDESTLLTCQSQH*LYCNVE Trigger: CTCTACATTGCAGTACAGGCAGTGCTGGCTCTGGCA...TGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | ATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGCGTAGCCAAGCTTaGTGTACCCGGTGCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: IGWEGQGSSTLQSFLEKPLRSQA*CTRCRS Trigger: ACTGCGGCACCGGGTACACCAAGCTTGGCTACGCAG...TGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088244.6 |
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| CDS-3UTR TCA 90 bp | TTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACATTATCCTGCCTCCACTaGGCTCTTGGCTCAGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: FTGKTVPGPTGDESTLLTLSCLH*ALGSAL Trigger: TAAAGCTGAGCCAAGAGCTCAGTGGAGGCAGGATAA...TGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACACACCCATTGATCAACTACCTTTaGAGATTCTCGGATGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: GKTVPGPTGDESTLLTHPLINYL*RFSDGD Trigger: ATCGCCATCCGAGAATCTGCAAAGGTAGTTGATCAA...TGGGTGTGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088244.6 |
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| CDS-3UTR GCA 90 bp | TTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACACAGCACTGCCTGTACTaGAATGTAGAGTCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FTGKTVPGPTGDESTLLTQHCLY*NVESWY Trigger: GTACCAGGACTCTACATTGCAGTACAGGCAGTGCTG...TGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | AAAATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCGAAGACAGGGTTGTaGCGGCAGATGCTTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KIGWEGQGSSTLQSFLEKPKTGL*RQMLGP Trigger: CGGCCCAAGCATCTGCCGCCACAACCCTGTCTTCGG...TTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | TTTACTGGGAAGACCGTGCCTGGCCCCACTGGCGATGAAAGCACGCTGCTCACAAGCAGTACTTCTCCTTaGTGGCTTTTGCGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FTGKTVPGPTGDESTLLTSSTSP*WLLRFP Trigger: TGGAAACCGCAAAAGCCATCAAGGAGAAGTACTGCT...TGTGAGCAGCGTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGCAGCACTGCCTGTACTaGAATGTAGAGTCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GWEGQGSSTLQSFLEKPLQHCLY*NVESWY Trigger: GTACCAGGACTCTACATTGCAGTACAGGCAGTGCTG...CAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGGGCTCAGCTTTAACCTaGCGTCCACCACTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GWEGQGSSTLQSFLEKPLGSALT*RPPLFS Trigger: TGAAAAGAGTGGTGGACGCCAGGTTAAAGCTGAGCC...CAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | ATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCAGTGGCGGCAGATGCTTaGGCCGTATTCCTCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: IGWEGQGSSTLQSFLEKPVAADA*AVFLIV Trigger: GACTATGAGGAATACGGCCCAAGCATCTGCCGCCAC...TGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGAGCAGTACTTCTCCTTaGTGGCTTTTGCGGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GWEGQGSSTLQSFLEKPLSSTSP*WLLRFP Trigger: TGGAAACCGCAAAAGCCATCAAGGAGAAGTACTGCT...CAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCACTGCATCCTCTGACGTCCAAAATCTCTaGACATTGTGGAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RPGFLHLTVFPGETTASSDVQNL*TLWSLQ Trigger: CTGGAGGCTCCACAATGTTCAGAGATTTTGGACGTC...AGAGGATGCAGTGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | AAAATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAAGGTTGTGGCGGCAGATaGTTGGGCCGTATTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KIGWEGQGSSTLQSFLEKGCGGR*LGRIPH Trigger: ATGAGGAATACGGCCCAAGCATCTGCCGCCACAACC...TTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTTTCCTGGAGAAACCACTGCATCCTCTAGTAGTTTCTACAGTTGCATGGGTGGCGGCAGATGCTTaGGCCGTATTCCTCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: QSFLEKPLHPLVVSTVAWVAADA*AVFLIV Trigger: GACTATGAGGAATACGGCCCAAGCATCTGCCGCCAC...CCATGCAACTGTAGAAACTACTAGAGGATGCAGTGGTTTCTCCAGGAAAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| 3UTR CAA 72 bp | GTTTCTACAGTTGCATGGACGCCTTCAGAGCTACACTaGACTAGAATCTCGGGTGGAAAGGAGAGAGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VSTVAWTPSELH*TRISGGKEREW Trigger: CCACTCTCTCTCCTTTCCACCCGAGATTCTAGTCAAGTGTAGCTCTGAAGGCGTCCATGCAACTGTAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGACATGGCATAAAGCCTGCACACACATCAGAACATGCCTCACAATCAAGGACGTCCAAAATCTCTaGACATTGTGGAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QQTWHKACTHIRTCLTIKDVQNL*TLWSLQ Trigger: CTGGAGGCTCCACAATGTTCAGAGATTTTGGACGTC...CTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCTTTATGCCATGTCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR TCA 90 bp | CAAGTACTTTATTACAGAACTCTGACATCCATGAACTCTGTGACTACTCATGCTGCTGCATGTGGTGCGTaGCCACCTGCACCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: QVLYYRTLTSMNSVTTHAAACGA*PPAPPQ Trigger: CTGTGGAGGTGCAGGTGGTCACGCACCACATGCAGC...AGCATGAGTAGTCACAGAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | ACCTTACAGTCTTTCCTGGAGAAACCACTGCATCCTCTAGTAGTTTCTACAGTTCCTCCACTGAGCTCTTaGCTCAGCTTTAACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: TLQSFLEKPLHPLVVSTVPPLSS*LSFNLA Trigger: CGCCAGGTTAAAGCTGAGCCAAGAGCTCAGTGGAGG...AACTGTAGAAACTACTAGAGGATGCAGTGGTTTCTCCAGGAAAGACTGTAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | AACAGTGCAATAGTATTTCATCCCGCACTCAACAACATTAAACCATTGTCTTCTCCGAAGACAGGGTTGTaGCGGCAGATGCTTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NSAIVFHPALNNIKPLSSPKTGL*RQMLGP Trigger: CGGCCCAAGCATCTGCCGCCACAACCCTGTCTTCGG...AGAAGACAATGGTTTAATGTTGTTGAGTGCGGGATGAAATACTATTGCACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | CCTTCAGAGCTACACTTGACTAGAATCTCGGGTGGAAAGGAGAGAGAGTGGGAGCTTTTCAAATCTCTCTaGAGACGACGTCCAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PSELHLTRISGGKEREWELFKSL*RRRPKS Trigger: AGATTTTGGACGTCGTCTGCAGAGAGATTTGAAAAG...CTCCCACTCTCTCTCCTTTCCACCCGAGATTCTAGTCAAGTGTAGCTCTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | GAACATGCCTCACAATCAAGTACTTTATTACAGAACTCTGACATCCATGAACTCTGGTGCGTGACCACCTaGACCTCCACAGGTTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: EHASQSSTLLQNSDIHELWCVTT*TSTGLG Trigger: GCCTAAACCTGTGGAGGTGCAGGTGGTCACGCACCA...GAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTGATTGTGAGGCATGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | ATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCAATAATGAACTTCTTCTaGTTGATGGCATTGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: IGWEGQGSSTLQSFLEKPIMNFF*LMALIP Trigger: AGGGATCAATGCCATCAACCAGAAGAAGTTCATTAT...TGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | TCTAGCAGCCTTTATTACAACAGTGCAATAGTATTTCATCCCGCACTCAACAACCCTCCACTGAGCTCTTaGCTCAGCTTTAACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SSSLYYNSAIVFHPALNNPPLSS*LSFNLA Trigger: CGCCAGGTTAAAGCTGAGCCAAGAGCTCAGTGGAGG...GTTGTTGAGTGCGGGATGAAATACTATTGCACTGTTGTAATAAAGGCTGCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | AGCCTGCACACACATCAGAACATGCCTCACAATCAAGTACTTTATTACAGAACTTGCCAGAGCCAGCACTaGCTGTACTGCAATGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLHTHQNMPHNQVLYYRTCQSQH*LYCNVE Trigger: CTCTACATTGCAGTACAGGCAGTGCTGGCTCTGGCA...AGTTCTGTAATAAAGTACTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | TCAAGTACTTTATTACAGAACTCTGACATCCATGAACTCTGTGACTACTCATGCGGTTGTGGCGGCAGATaGTTGGGCCGTATTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSTLLQNSDIHELCDYSCGCGGR*LGRIPH Trigger: ATGAGGAATACGGCCCAAGCATCTGCCGCCACAACC...GCATGAGTAGTCACAGAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | TTACAGTCTTTCCTGGAGAAACCACTGCATCCTCTAGTAGTTTCTACAGTTGCAGGCTCAGCTTTAACCTaGCGTCCACCACTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LQSFLEKPLHPLVVSTVAGSALT*RPPLFS Trigger: TGAAAAGAGTGGTGGACGCCAGGTTAAAGCTGAGCC...TGCAACTGTAGAAACTACTAGAGGATGCAGTGGTTTCTCCAGGAAAGACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CCA 90 bp | GAACATGCCTCACAATCAAGTACTTTATTACAGAACTCTGACATCCATGAACTCATAATGAACTTCTTCTaGTTGATGGCATTGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: EHASQSSTLLQNSDIHELIMNFF*LMALIP Trigger: AGGGATCAATGCCATCAACCAGAAGAAGTTCATTAT...GAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTGATTGTGAGGCATGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR GCA 90 bp | AATCAAGTACTTTATTACAGAACTCTGACATCCATGAACTCTGTGACTACTCATCTTTTCAAATCTCTCTaGAGACGACGTCCAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: NQVLYYRTLTSMNSVTTHLFKSL*RRRPKS Trigger: AGATTTTGGACGTCGTCTGCAGAGAGATTTGAAAAG...ATGAGTAGTCACAGAGTTCATGGATGTCAGAGTTCTGTAATAAAGTACTTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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| CDS-3UTR CAA 90 bp | ATAGGCTGGGAAGGCCAGGGTTCCTCCACCTTACAGTCTTTCCTGGAGAAACCAACTCCGAAGACAGGGTaGTGGCGGCAGATGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: IGWEGQGSSTLQSFLEKPTPKTG*WRQMLG Trigger: CCCAAGCATCTGCCGCCACAACCCTGTCTTCGGAGT...TGGTTTCTCCAGGAAAGACTGTAAGGTGGAGGAACCCTGGCCTTCCCAGCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CAA 90 bp | AAGGACACTTATTCCCCAACAGGACACTTGTCAGACAATGGCTCCAACGCAGACACTCCGAAGACAGGGTaGTGGCGGCAGATGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: KDTYSPTGHLSDNGSNADTPKTG*WRQMLG Trigger: CCCAAGCATCTGCCGCCACAACCCTGTCTTCGGAGT...GTCTGCGTTGGAGCCATTGTCTGACAAGTGTCCTGTTGGGGAATAAGTGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CAA 90 bp | AAGGACACTTATTCCCCAACAGGACACTTGTCAGACAATGGCTCCAACGCAGACTGTGGCGGCAGATGCTaGGGCCGTATTCCTCATAGT | + |
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Preference number: 5 (lower is better) Translates to: KDTYSPTGHLSDNGSNADCGGRC*GRIPHS Trigger: ACTATGAGGAATACGGCCCAAGCATCTGCCGCCACA...GTCTGCGTTGGAGCCATTGTCTGACAAGTGTCCTGTTGGGGAATAAGTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088244.6 ENSMUST00000128727.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGCACACACATCAGAACATGCCTCACAATCAAGTACTTTATTACAGAACTGTGGCGGCAGATGCTaGGGCCGTATTCCTCATAGT | + |
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Preference number: 5 (lower is better) Translates to: KPAHTSEHASQSSTLLQNCGGRC*GRIPHS Trigger: ACTATGAGGAATACGGCCCAAGCATCTGCCGCCACA...GTTCTGTAATAAAGTACTTGATTGTGAGGCATGTTCTGATGTGTGTGCAGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128727.8 |
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