Pregenerated sensors for ACTR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020152Ensembl transcript IDs: ENSMUST00000000137.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATaGTTGACTACTGGTAAATTTTCTATTGTGGTTGTTGTTGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: RTKEGWEVASITVQT*LTTGKFSIVVVVAK Trigger: TTTAGCAACAACAACCACAATAGAAAATTTACCAGTAGTCAACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CCA 90 bp | AGCACTGATCAGGAACATAAAAGTACAACTTTCAAGAGTGGAACTTaGTTGGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACAGCATT | + |
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Preference number: 1 (lower is better) Translates to: STDQEHKSTTFKSGT*LVHFLSASRKNNSI Trigger: AATGCTGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTACTTTTATGTTCCTGATCAGTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CCA 90 bp | CTGATCAGGAACATAAAAGTACAACTTTCAAGAGTGGAACTTGGTTaGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACAGCATTAGAA | + |
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Preference number: 1 (lower is better) Translates to: LIRNIKVQLSRVELG*FISLVLPGKTTALE Trigger: TTCTAATGCTGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTACTTTTATGTTCCTGATCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCCTGCAAACACTCTTCCTGCAAGAACCAAAGAGGGCTGGGAAGTAGCCGCAGCAGTGACCTGCTaGAAGCTAACACTACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DRPANTLPARTKEGWEVAAAVTC*KLTLQR Trigger: CCTCTGTAGTGTTAGCTTTCAGCAGGTCACTGCTGC...GGCTACTTCCCAGCCCTCTTTGGTTCTTGCAGGAAGAGTGTTTGCAGGCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTTAAAGCATTAGAGGCGTaGTGGGGACAAGCCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: CKNQRGLGSSLHNCTDMVKALEA*WGQACY Trigger: ATAGCAGGCTTGTCCCCATCACGCCTCTAATGCTTT...AACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTTAGCATTAGAAAATGCTaGCCCTTGAGCAATTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: CKNQRGLGSSLHNCTDMVSIRKC*PLSNFL Trigger: TAGAAAATTGCTCAAGGGCCAGCATTTTCTAATGCT...AACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCAGACAGAGAAAAACTTaGCCTTTCTGTCAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ILSELTNNTNRTGLQTLFRQRKT*PFCQKG Trigger: TCCCTTTTGACAGAAAGGTCAAGTTTTTCTCTGTCT...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTTACAAGCAGTTCTAAATaGCTACAAAGAAAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: CKNQRGLGSSLHNCTDMVTSSSK*LQRKKQ Trigger: CTGTTTCTTTCTTTGTAGGCATTTAGAACTGCTTGT...AACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCAAATATACTCCCAGCTaGCAGATGGTAATAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: ILSELTNNTNRTGLQTLFKYTPS*QMVIKH Trigger: GTGTTTTATTACCATCTGTCAGCTGGGAGTATATTT...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCAACAGCATTAGAAAATaGTGGCCCTTGAGCAATTTT | + |
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Preference number: 2 (lower is better) Translates to: ILSELTNNTNRTGLQTLFNSIRK*WPLSNF Trigger: AAAATTGCTCAAGGGCCAGCATTTTCTAATGCTGTT...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CAA 90 bp | ACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTaGACTACTGGTAAATTTTCTATTGTGGTTGTTGTTGCTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: TKEGWEVASITVQTW*TTGKFSIVVVVAKI Trigger: AATTTTAGCAACAACAACCACAATAGAAAATTTACCAGTAGTCAACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCACCAAGTCCCAATGTGAATGTTACTACAACAATTATAATTAACCCACAGTGCCCTGGTAATGTCTaGAAAGATTTGGTAGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LAPSPNVNVTTTIIINPQCPGNV*KDLVAL Trigger: TAAGGCTACCAAATCTTTGCAGACATTACCAGGGCA...CTGTGGGTTAATTATAATTGTTGTAGTAACATTCACATTGGGACTTGGTGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCTACAACTTTCAAGAGTaGAACTTGGTTGGTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: ILSELTNNTNRTGLQTLFYNFQE*NLVGSF Trigger: AAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTA...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CAA 90 bp | ACTGATCAGGAACATAAAAGTACAACTTTCAAGAGTGGAACTTGGTaGGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACAGCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: TDQEHKSTTFKSGTW*VHFLSASRKNNSIR Trigger: TCTAATGCTGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTACTTTTATGTTCCTGATCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCACCAAGTCCCAATGTGAATGTTACTACAACAATTATAATTAACCCACAGCAAGAAAGCAAAAATTaGAAGCCTACAAGCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LAPSPNVNVTTTIIINPQQESKN*KPTSSS Trigger: AGAACTGCTTGTAGGCTTCCAATTTTTGCTTTCTTG...CTGTGGGTTAATTATAATTGTTGTAGTAACATTCACATTGGGACTTGGTGCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR GCA 72 bp | GCTAACACTACAGAGGAAAGGCCCTCCCGCTCGGGCTaGCCACCCACCCCTTACCACCCCCACCCAGCATAT | + |
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Preference number: 3 (lower is better) Translates to: ANTTEERPSRSG*PPTPYHPHPAY Trigger: ATATGCTGGGTGGGGGTGGTAAGGGGTGGGTGGGCAGCCCGAGCGGGAGGGCCTTTCCTCTGTAGTGTTAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR GCA 72 bp | AGTCACGCACCCAACACCGAGCAGCTGACACCGCACTaGACCGGCGGGCTGTCGTGTGTACTGAGCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: SHAPNTEQLTPH*TGGLSCVLSMS Trigger: GGACATGCTCAGTACACACGACAGCCCGCCGGTGCAGTGCGGTGTCAGCTGCTCGGTGTTGGGTGCGTGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR TCA 72 bp | CTTCAGGGGACTTCAAAAGTAGCAGCAGTGACCTGCTaGAAGCTAACACTACAGAGGAAAGGCCCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: LQGTSKVAAVTC*KLTLQRKGPPA Trigger: AGCGGGAGGGCCTTTCCTCTGTAGTGTTAGCTTTCAGCAGGTCACTGCTGCTACTTTTGAAGTCCCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR TCA 72 bp | GGAAGACCCCGCACTTGGGTACCACCTGATTCTTTCTaGGCTGACAAACAATACCAACAGGACAGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GRPRTWVPPDSF*ADKQYQQDRPA Trigger: TGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAATCAGGTGGTACCCAAGTGCGGGGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR GCA 72 bp | ACAATACCAACAGGACAGGCCTGCAAACACTCTTCCTaGAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: TIPTGQACKHSS*KNQRGLGSSLH Trigger: ATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCAGGAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CAA 90 bp | ATACCAACAGGACAGGCCTGCAAACACTCTTCCTGCAAGAACCAAAGAGGGCTGGCAAGAAAGCAAAAATaGGAAGCCTACAAGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPTGQACKHSSCKNQRGLARKQK*EAYKQF Trigger: GAACTGCTTGTAGGCTTCCAATTTTTGCTTTCTTGC...CAGCCCTCTTTGGTTCTTGCAGGAAGAGTGTTTGCAGGCCTGTCCTGTTGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTTAGAAAATGCTGGCCCTaGAGCAATTTTCTATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: CKNQRGLGSSLHNCTDMVRKCWP*SNFLSV Trigger: TACAGATAGAAAATTGCTCAAGGGCCAGCATTTTCT...AACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCAAGACAGAGAAAAACTaGACCTTTCTGTCAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: ILSELTNNTNRTGLQTLFKTEKN*TFLSKG Trigger: CCCTTTTGACAGAAAGGTCAAGTTTTTCTCTGTCTT...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCACCAAGTCCCAATGTGAATGTTACTACAACAATTATAATTAACCCACAGAGGTTCATGCATCTTTaGTACCCAGAGCAGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: LAPSPNVNVTTTIIINPQRFMHL*YPEQKT Trigger: GGTCTTCTGCTCTGGGTACAAAAGATGCATGAACCT...CTGTGGGTTAATTATAATTGTTGTAGTAACATTCACATTGGGACTTGGTGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CCA 72 bp | TATTCTTTCTTGTTTTCACCCCTTTGTTTAAAGCCATaGTCAAAGCCAAGAGTTGATCGTTTGTCTACACTC | + |
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Preference number: 3 (lower is better) Translates to: YSFLFSPLCLKP*SKPRVDRLSTL Trigger: GAGTGTAGACAAACGATCAACTCTTGGCTTTGACCATGGCTTTAAACAAAGGGGTGAAAACAAGAAAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CCA 72 bp | AACATAAAAGTACAACTTTCAAGAGTGGAACTTGGTTaGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACA | + |
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Preference number: 3 (lower is better) Translates to: NIKVQLSRVELG*FISLVLPGKTT Trigger: TGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTACTTTTATGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR TCA 72 bp | AATGTTACTACAACAATTATAATTAACCCACAGCCATaGATTACTTCTCTGTACAGTAGCTCTTGTCGAGAA | + |
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Preference number: 3 (lower is better) Translates to: NVTTTIIINPQP*ITSLYSSSCRE Trigger: TTCTCGACAAGAGCTACTGTACAGAGAAGTAATTCATGGCTGTGGGTTAATTATAATTGTTGTAGTAACATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| CDS-3UTR CCA 90 bp | TGCAAGAACCAAAGAGGGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTTGTGCTTCCTGCGGGGTaGGTCTTCAATTCGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: CKNQRGLGSSLHNCTDMVVLPAG*VFNSDL Trigger: AAGATCCGAATTGAAGACCCACCCCGCAGGAAGCAC...AACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCCCTCTTTGGTTCTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCCCCAATTCCGCACGATaGCATTCTCCATGGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ILSELTNNTNRTGLQTLFPNSAR*HSPWGS Trigger: ACTACCCCATGGAGAATGGCATCGTGCGGAATTGGG...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| CDS-3UTR GCA 90 bp | ATTCTTTCTGAGCTGACAAACAATACCAACAGGACAGGCCTGCAAACACTCTTCGGAACGCAGCTCACTTaGCTCATCACCAACCATAAG | + |
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Preference number: 4 (lower is better) Translates to: ILSELTNNTNRTGLQTLFGTQLT*LITNHK Trigger: CTTATGGTTGGTGATGAGGCAAGTGAGCTGCGTTCC...GAAGAGTGTTTGCAGGCCTGTCCTGTTGGTATTGTTTGTCAGCTCAGAAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTTGGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACAGCATTAGAAAATCCCAAGAACACCATGTaGTTCCTGCGGGGTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LGWFISLVLPGKTTALENPKNTM*FLRGGS Trigger: AGACCCACCCCGCAGGAAGCACATGGTGTTCTTGGG...ATTTTCTAATGCTGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CAA 72 bp | GGCTGGGAAGTAGCCTCCATAACTGTACAGACATGGTaGACTACTGGTAAATTTTCTATTGTGGTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GWEVASITVQTW*TTGKFSIVVVV Trigger: AACAACAACCACAATAGAAAATTTACCAGTAGTCAACCATGTCTGTACAGTTATGGAGGCTACTTCCCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CAA 72 bp | TGTTTAAAGCCATGGTCAAAGCCAAGAGTTGATCGTTaGTCTACACTCAATAGTCCTTGGTACCAGTCCTAT | + |
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Preference number: 4 (lower is better) Translates to: CLKPWSKPRVDR*STLNSPWYQSY Trigger: ATAGGACTGGTACCAAGGACTATTGAGTGTAGACAAACGATCAACTCTTGGCTTTGACCATGGCTTTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| 3UTR CAA 72 bp | GAACATAAAAGTACAACTTTCAAGAGTGGAACTTGGTaGGTTCATTTCCTTAGTGCTTCCAGGAAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: EHKSTTFKSGTW*VHFLSASRKNN Trigger: GTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAGTTCCACTCTTGAAAGTTGTACTTTTATGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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| CDS-3UTR CAA 90 bp | CTTGGTTGGTTCATTTCCTTAGTGCTTCCAGGAAAAACAACAGCATTAGAAAATCGCAACAGCAGCAGCTaGATAAGATACCTGGTAATA | + |
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Preference number: 5 (lower is better) Translates to: LGWFISLVLPGKTTALENRNSSS*IRYLVI Trigger: TATTACCAGGTATCTTATCAAGCTGCTGCTGTTGCG...ATTTTCTAATGCTGTTGTTTTTCCTGGAAGCACTAAGGAAATGAACCAACCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000137.8 |
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