Pregenerated sensors for ACTR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037351Ensembl transcript IDs: ENSMUST00000043951.10, ENSMUST00000159448.8, ENSMUST00000160084.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGCTCAGCAGGAAGGTTCCAAACACGGGTGGCTGGGAGCCCATaGTGCCAGCAGGACCCTGCACAGGAGCTGGTTTGCAGGGCCCCT | + |
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Preference number: 1 (lower is better) Translates to: RSSAGRFQTRVAGSP*CQQDPAQELVCRAP Trigger: AGGGGCCCTGCAAACCAGCTCCTGTGCAGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGCTGAGCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 90 bp | CAAGTGTGGGCACGAGGAGCTCAGCAGGAAGGTTCCAAACACGGGTaGCTGGGAGCCCATGGTGCCAGCAGGACCCTGCACAGGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QVWARGAQQEGSKHG*LGAHGASRTLHRSW Trigger: CCAGCTCCTGTGCAGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGCTGAGCTCCTCGTGCCCACACTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | AGCACCTGCACACCTCGGTGGGCCCATGGAGGTGCGGTACACACATaGGAGGCACACACAGCAGCCCTAGCAGGTCACAGTGGGAGGGTA | + |
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Preference number: 1 (lower is better) Translates to: STCTPRWAHGGAVHT*EAHTAALAGHSGRV Trigger: TACCCTCCCACTGTGACCTGCTAGGGCTGCTGTGTGTGCCTCGCATGTGTGTACCGCACCTCCATGGGCCCACCGAGGTGTGCAGGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 90 bp | CTAAGCCTGCATCACTGCCAGCACCTGCACACCTCGGTGGGCCCATaGAGGTGCGGTACACACATGCGAGGCACACACAGCAGCCCTAGC | + |
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Preference number: 1 (lower is better) Translates to: LSLHHCQHLHTSVGP*RCGTHMRGTHSSPS Trigger: GCTAGGGCTGCTGTGTGTGCCTCGCATGTGTGTACCGCACCTCCATGGGCCCACCGAGGTGTGCAGGTGCTGGCAGTGATGCAGGCTTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | TTGCCCTGCCAGGCCAGAAAGAGGAGGCAGCATCAAACACCACTGTaGCTCACCACCCTGAGGGGAGCTCCTGGCTGTCCCTCCCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPCQARKRRQHQTPL*LTTLRGAPGCPSLQ Trigger: CTGAAGGGAGGGACAGCCAGGAGCTCCCCTCAGGGTGGTGAGGCACAGTGGTGTTTGATGCTGCCTCCTCTTTCTGGCCTGGCAGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | GCACACACAGCAGCCCTAGCAGGTCACAGTGGGAGGGTACGAGGCTaGTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGCTCTGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: AHTAALAGHSGRVRG*SHLSCRLKLLSSAS Trigger: ACTGGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACCCTCCCACTGTGACCTGCTAGGGCTGCTGTGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 90 bp | GGCCACAGTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTaGGTTCCTCAGTTCCGATGCTCCAGCTTGGGACTGCCAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: GHSGTARGSLTPARC*VPQFRCSSLGLPAM Trigger: CATGGCTGGCAGTCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCACTGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 90 bp | AGATTTGAGGTGGTTACCCGCACAGTAGATTATGAGCACACACACTaGGTGGGCAGGAAGGAGCAGGGTCGTGGGCGAGGCTGGGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RFEVVTRTVDYEHTH*VGRKEQGRGRGWGP Trigger: GGGGCCCCAGCCTCGCCCACGACCCTGCTCCTTCCTGCCCACCCAGTGTGTGTGCTCATAATCTACTGTGCGGGTAACCACCTCAAATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR TCA 90 bp | GGAGGGTACGAGGCTGCTCTCACCTGTCCTGTCGCCTCAAGCTCCTaGGCTCTGCCAGTGTTCTTTCTCTCAGCACTCCCAGTGATGGGC | + |
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Preference number: 1 (lower is better) Translates to: GGYEAALTCPVASSS*ALPVFFLSALPVMG Trigger: GCCCATCACTGGGAGTGCTGAGAGAAAGAACACTGGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | CAGAGCTTCAAGGCCAGAGCAAGGAACCACAGGCCACAGTGGCACTaGAAGAGGGTCACTCACACCAGCTCGATGCTGGGTTCCTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: QSFKARARNHRPQWH*KRVTHTSSMLGSSV Trigger: AACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCACTGTGGCCTGTGGTTCCTTGCTCTGGCCTTGAAGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | CCACGAGCTGTGGCTGCCCATGGCTCTGATGCTCTGACTCTTGGCTaGATTCCCTCAGTGGATGGAGGACTGTCCCCTAGTCAGTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: PRAVAAHGSDALTLG*IPSVDGGLSPSQSY Trigger: ATAGGACTGACTAGGGGACAGTCCTCCATCCACTGAGGGAATGCAGCCAAGAGTCAGAGCATCAGAGCCATGGGCAGCCACAGCTCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | GTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCTaGTGTAAGCTGCTAAGCCTGCATCACTGCCAGCACCTGCACACC | + |
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Preference number: 1 (lower is better) Translates to: VEPGPFSGCLSFFFS*CKLLSLHHCQHLHT Trigger: GGTGTGCAGGTGCTGGCAGTGATGCAGGCTTAGCAGCTTACAGCAGGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR TCA 90 bp | CAAGCTCCTGAGCTCTGCCAGTGTTCTTTCTCTCAGCACTCCCAGTaGTGGGCGAGCAAACAAGAGCACAGAGCCCCAAGAATCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: QAPELCQCSFSQHSQ*WASKQEHRAPRIRA Trigger: GGCTCTGATTCTTGGGGCTCTGTGCTCTTGTTTGCTCGCCCATCACTGGGAGTGCTGAGAGAAAGAACACTGGCAGAGCTCAGGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | CAGATTGTTCTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTaGCTCTCCTTCTTCTTCTCCTGCTGTAAGCTGCTAAGCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: QIVLFLPVEPGPFSG*LSFFFSCCKLLSLH Trigger: ATGCAGGCTTAGCAGCTTACAGCAGGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAGAACAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | TGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTGCACTATaGACCCACACACTAACAAGCAAGCTTCTCTACTTGCTGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: CILFPPSASIMCCAL*THTLTSKLLYLLPA Trigger: TGCAGGCAGCAAGTAGAGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 90 bp | AGCCCTTTGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTaGACTATGCACCCACACACTAACAAGCAAGCTTCTCTACTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SPLYLVSSISLNHVL*TMHPHTNKQASLLA Trigger: AGCAAGTAGAGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAAAGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR TCA 90 bp | CAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCTCCCTTGTGCCTCACCACCCTaGGGGGAGCTCCTGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QFTFLANCPSPACQRALPCASPP*GELLAV Trigger: GACAGCCAGGAGCTCCCCTCAGGGTGGTGAGGCACA...AGGGAGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR TCA 90 bp | GGTACGAGGCTGCTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGCTCTGCCAGTCTCAGCACTCCCAGTaGTGGGCGAGCAAACAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GTRLLSPVLSPQAPELCQSQHSQ*WASKQE Trigger: CTCTTGTTTGCTCGCCCATCACTGGGAGTGCTGAGA...CTGGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGCCACAGACCAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCCTGAGGGGAGCTCCTaGCTGTCCCTCCCTTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HCATDQFTFLANCPSPACPEGSS*LSLPSA Trigger: GGCTGAAGGGAGGGACAGCCAGGAGCTCCCCTCAGG...ACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAAGGTTCCAAACACGGGTGGCTGGGAGCCCATGGTGCCAGCAGGACCCTTCTTCCTGTAGAGCCTaGTCCATTCTCAGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AGRFQTRVAGSPWCQQDPSSCRA*SILRLP Trigger: AGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGA...AGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 90 bp | GGGCACGGAGGGCACGAGGAGGGAGTAGCAAATCAGTGTAGTGCTTaGAAAGAGAGTGGGGCAAACCACGAGCTGTGGCTGCCCATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GHGGHEEGVANQCSA*KESGANHELWLPMA Trigger: AGCCATGGGCAGCCACAGCTCGTGGTTTGCCCCACTCTCTTTCAAAGCACTACACTGATTTGCTACTCCCTCCTCGTGCCCTCCGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCTCCCTAACCACACACCAGCTCGATGCTaGGTTCCTCAGTTCCGATGC | + |
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Preference number: 2 (lower is better) Translates to: TFLANCPSPACQRALPNHTPARC*VPQFRC Trigger: GCATCGGAACTGAGGAACCCAGCATCGAGCTGGTGT...GTGGTTAGGGAGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGCCACAGACCAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTGCTGCATTCCCTCAGTaGATGGAGGACTGTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: HCATDQFTFLANCPSPACAAFPQ*MEDCPL Trigger: TAGGGGACAGTCCTCCATCCACTGAGGGAATGCAGC...ACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAGGGCCCCTTAGCACAGGCGTCTGTGTAAACTTTGATGCTGTGACCACAGCAGGACATTTGCCCTaGCAGGCCAGAAAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: FAGPLSTGVCVNFDAVTTAGHLP*QARKRR Trigger: CCTCCTCTTTCTGGCCTGGCAGGGCAAATGTCCTGC...TGTGGTCACAGCATCAAAGTTTACACAGACGCCTGTGCTAAGGGGCCCTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | CAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCTCCCTCCTATGCAGGACATTTaGCCTGCCAGGCCAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: QFTFLANCPSPACQRALPPMQDI*PARPER Trigger: TCTTTCTGGCCTGGCAGGGCAAATGTCCTGCATAGG...AGGGAGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCGTCGCCTCAAGCTCCTaGGCTCTGCCAGTGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LFLPVEPGPFSGCLSFFFVASSS*ALPVFF Trigger: AAAGAACACTGGCAGAGCTCAGGAGCTTGAGGCGAC...GAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | CACACTAACAAGCAAGCTTCTCTACTTGCTGCCTGCAGGACTCCTGCAGATTGTGCTCCAGCTTGGGACTaGCAGCCATGCAGCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: HTNKQASLLAACRTPADCAPAWD*QPCSQS Trigger: TGATTGGCTGCATGGCTGGCAGTCCCAAGCTGGAGC...ACAATCTGCAGGAGTCCTGCAGGCAGCAAGTAGAGAAGCTTGCTTGTTAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCAGGACTCCTGCAGATTGTTCTGTTTCTTCCTGTAGAGCCTGGTCCATTAACCACAGGCCACAGTaGCACTGCAAGAGGGTCACT | + |
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Preference number: 2 (lower is better) Translates to: ACRTPADCSVSSCRAWSINHRPQ*HCKRVT Trigger: AGTGACCCTCTTGCAGTGCCACTGTGGCCTGTGGTT...AATGGACCAGGCTCTACAGGAAGAAACAGAACAATCTGCAGGAGTCCTGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCTGCATCAGTGTAGTGCTTTaGAAGAGAGTGGGGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: LPVEPGPFSGCLSFFFSCISVVL*KRVGQT Trigger: GGTTTGCCCCACTCTCTTTCAAAGCACTACACTGAT...GCAGGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCGCTCTGACTCTTGGCTaGATTCCCTCAGTGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: LFLPVEPGPFSGCLSFFFALTLG*IPSVDG Trigger: TCCATCCACTGAGGGAATGCAGCCAAGAGTCAGAGC...GAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTCACTACTCTTCCACAGTGAAAACTTGTCACCTAGCAAACGGTTAATGTCCGTGGGCCCATGGAGGTaGGGTACACACATGCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CSLLFHSENLSPSKRLMSVGPWR*GTHMRG Trigger: GCCTCGCATGTGTGTACCGCACCTCCATGGGCCCAC...GGACATTAACCGTTTGCTAGGTGACAAGTTTTCACTGTGGAAGAGTAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAGGGCCCCTTAGCACAGGCGTCTGTGTAAACTTTGATGCTGTGACCACATCTCTACTTGCTGCCTaGAGGACTCCTGCAGATTGT | + |
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Preference number: 2 (lower is better) Translates to: FAGPLSTGVCVNFDAVTTSLLAA*RTPADC Trigger: ACAATCTGCAGGAGTCCTGCAGGCAGCAAGTAGAGA...TGTGGTCACAGCATCAAAGTTTACACAGACGCCTGTGCTAAGGGGCCCTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCCCTTCCCTTTGGGTCTaGATCCTGATTAAATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FLPVEPGPFSGCLSFFFSPSLWV*ILIKWL Trigger: AAGCCATTTAATCAGGATTCAGACCCAAAGGGAAGG...GGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTCACTACTCTTCCACAGTGAAAACTTGTCACCTAGCAAACGGTTAATGTCCCATCAAACACCACTGTaGCTCACCACCCTGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: CSLLFHSENLSPSKRLMSHQTPL*LTTLRG Trigger: TCCCCTCAGGGTGGTGAGGCACAGTGGTGTTTGATG...GGACATTAACCGTTTGCTAGGTGACAAGTTTTCACTGTGGAAGAGTAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 90 bp | TGTTGTGCACTATGCACCCACACACTAACAAGCAAGCTTCTCTACTaGCTGCCTGCAGGACTCCTGCAGATTGTTCTGTTTCTTCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: CCALCTHTLTSKLLY*LPAGLLQIVLFLPV Trigger: TACAGGAAGAAACAGAACAATCTGCAGGAGTCCTGCAGGCAGCAAGTAGAGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CCA 90 bp | GTCCATCTGACCTCTTTGGTTTATGTCACTGTGCCACAGACCAATTTACCTTCCTGCTTTGAAAGAGAGTaGGGCAAACCACGAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VHLTSLVYVTVPQTNLPSCFERE*GKPRAV Trigger: CACAGCTCGTGGTTTGCCCCACTCTCTTTCAAAGCA...GGAAGGTAAATTGGTCTGTGGCACAGTGACATAAACCAAAGAGGTCAGATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 90 bp | GCTTTCAACACTTGGCTCTGCTCACTACTCTTCCACAGTGAAAACTaGTCACCTAGCAAACGGTTAATGTCCTTTCTTCAGATCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: AFNTWLCSLLFHSEN*SPSKRLMSFLQIPH Trigger: GTGGGGGATCTGAAGAAAGGACATTAACCGTTTGCTAGGTGACAAGTTTTCACTGTGGAAGAGTAGTGAGCAGAGCCAAGTGTTGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 90 bp | ATGAGCCCTTTGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTaGTGCACTATGCACCCACACACTAACAAGCAAGCTTCTCTACTT | + |
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Preference number: 2 (lower is better) Translates to: MSPLYLVSSISLNHV*CTMHPHTNKQASLL Trigger: AAGTAGAGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAAAGGGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 90 bp | ACTGTTCCAAACTGGCTGGCATCTTTCTCCTTTATGATGAGCCCTTaGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTGCACT | + |
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Preference number: 2 (lower is better) Translates to: TVPNWLASFSFMMSP*YLVSSISLNHVLCT Trigger: AGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAAAGGGCTCATCATAAAGGAGAAAGATGCCAGCCAGTTTGGAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 72 bp | ACGGGTGGCTGGGAGCCCATGGTGCCAGCAGGACCCTaGACAGGAGCTGGTTTGCAGGGCCCCTTAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TGGWEPMVPAGP*TGAGLQGPLAQ Trigger: CTGTGCTAAGGGGCCCTGCAAACCAGCTCCTGTGCAGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 72 bp | GCACGAGGAGCTCAGCAGGAAGGTTCCAAACACGGGTaGCTGGGAGCCCATGGTGCCAGCAGGACCCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: ARGAQQEGSKHG*LGAHGASRTLH Trigger: GTGCAGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGCTGAGCTCCTCGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 72 bp | GCAGCCCTAGCAGGTCACAGTGGGAGGGTACGAGGCTaGTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: AALAGHSGRVRG*SHLSCRLKLLS Trigger: GCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACCCTCCCACTGTGACCTGCTAGGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 72 bp | GGAAGGTTCCAAACACGGGTGGCTGGGAGCCCATGGTaGCAGCAGGACCCTGCACAGGAGCTGGTTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRFQTRVAGSPW*QQDPAQELVCR Trigger: CCTGCAAACCAGCTCCTGTGCAGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 72 bp | CATCACTGCCAGCACCTGCACACCTCGGTGGGCCCATaGAGGTGCGGTACACACATGCGAGGCACACACAGC | + |
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Preference number: 3 (lower is better) Translates to: HHCQHLHTSVGP*RCGTHMRGTHS Trigger: GCTGTGTGTGCCTCGCATGTGTGTACCGCACCTCCATGGGCCCACCGAGGTGTGCAGGTGCTGGCAGTGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CCA 72 bp | GGAGCCCATGGTGCCAGCAGGACCCTGCACAGGAGCTaGTTTGCAGGGCCCCTTAGCACAGGCGTCTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: GAHGASRTLHRS*FAGPLSTGVCV Trigger: TACACAGACGCCTGTGCTAAGGGGCCCTGCAAACCAGCTCCTGTGCAGGGTCCTGCTGGCACCATGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR-3UTR CAA 90 bp | GGTACGAGGCTGCTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGCTCTGCCAGTTCCGATGCTCCAGCTaGGGACTGCCAGCCATGCAG | + |
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Preference number: 3 (lower is better) Translates to: GTRLLSPVLSPQAPELCQFRCSS*GLPAMQ Trigger: CTGCATGGCTGGCAGTCCCAAGCTGGAGCATCGGAA...CTGGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR GCA 72 bp | CAGGCCAGAAAGAGGAGGCAGCATCAAACACCACTGTaGCTCACCACCCTGAGGGGAGCTCCTGGCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QARKRRQHQTPL*LTTLRGAPGCP Trigger: GGGACAGCCAGGAGCTCCCCTCAGGGTGGTGAGGCACAGTGGTGTTTGATGCTGCCTCCTCTTTCTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | ACACCTCGGTGGGCCCATGGAGGTGCGGTACACACATaGGAGGCACACACAGCAGCCCTAGCAGGTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TPRWAHGGAVHT*EAHTAALAGHS Trigger: ACTGTGACCTGCTAGGGCTGCTGTGTGTGCCTCGCATGTGTGTACCGCACCTCCATGGGCCCACCGAGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CCA 72 bp | AACACCACTGTGCCTCACCACCCTGAGGGGAGCTCCTaGCTGTCCCTCCCTTCAGCCTACTCCAGAGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTTVPHHPEGSS*LSLPSAYSRDP Trigger: TGGATCTCTGGAGTAGGCTGAAGGGAGGGACAGCCAGGAGCTCCCCTCAGGGTGGTGAGGCACAGTGGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CCA 72 bp | GTGGTTACCCGCACAGTAGATTATGAGCACACACACTaGGTGGGCAGGAAGGAGCAGGGTCGTGGGCGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VVTRTVDYEHTH*VGRKEQGRGRG Trigger: GCCTCGCCCACGACCCTGCTCCTTCCTGCCCACCCAGTGTGTGTGCTCATAATCTACTGTGCGGGTAACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR TCA 72 bp | GTGGGGCAAACCACGAGCTGTGGCTGCCCATGGCTCTaGTGCTCTGACTCTTGGCTGCATTCCCTCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGQTTSCGCPWL*CSDSWLHSLSG Trigger: TCCACTGAGGGAATGCAGCCAAGAGTCAGAGCATCAGAGCCATGGGCAGCCACAGCTCGTGGTTTGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR TCA 72 bp | CCCTCCCCAGCCTGTCAAAGGGCTCTCCCTAACCACTaGCCAAGCTCTTACAAGGCAGCATGGTGCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSPACQRALPNH*PSSYKAAWCSP Trigger: AGGGCTGCACCATGCTGCCTTGTAAGAGCTTGGTCAGTGGTTAGGGAGAGCCCTTTGACAGGCTGGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | AAGGCCAGAGCAAGGAACCACAGGCCACAGTGGCACTaGAAGAGGGTCACTCACACCAGCTCGATGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: KARARNHRPQWH*KRVTHTSSMLG Trigger: ACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCACTGTGGCCTGTGGTTCCTTGCTCTGGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CCA 72 bp | GGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTaGGTTCCTCAGTTCCGATGCTCCAGCTTGGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: GTARGSLTPARC*VPQFRCSSLGL Trigger: CAGTCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | AGTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATaGTGGGTTCCTCAGTTCCGATGCTCCAGCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGTARGSLTPAR*WVPQFRCSSLG Trigger: TCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR TCA 72 bp | GAGCTCTGCCAGTGTTCTTTCTCTCAGCACTCCCAGTaGTGGGCGAGCAAACAAGAGCACAGAGCCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ELCQCSFSQHSQ*WASKQEHRAPR Trigger: TCTTGGGGCTCTGTGCTCTTGTTTGCTCGCCCATCACTGGGAGTGCTGAGAGAAAGAACACTGGCAGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | CTGTCCCCTAGTCAGTCCTATGCAGGACATTTGCCCTaGCAGGCCAGAAAGAGGAGGCAGCATCAAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LSPSQSYAGHLP*QARKRRQHQTP Trigger: TGGTGTTTGATGCTGCCTCCTCTTTCTGGCCTGGCAGGGCAAATGTCCTGCATAGGACTGACTAGGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | GGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCTaGTGTAAGCTGCTAAGCCTGCATCACTGCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPFSGCLSFFFS*CKLLSLHHCQH Trigger: GTGCTGGCAGTGATGCAGGCTTAGCAGCTTACAGCAGGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCTCCCTAACCACGCCACACACCGGGCCTaGTCCATAATTATTACTATA | + |
|
Preference number: 3 (lower is better) Translates to: TFLANCPSPACQRALPNHATHRA*SIIITI Trigger: TATAGTAATAATTATGGACAAGGCCCGGTGTGTGGC...GTGGTTAGGGAGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | TTTATGTCACTGTGCCACAGACCAATTTACCTTCCTTaGCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FMSLCHRPIYLP*QLSLPSLSKGS Trigger: AGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTGACATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CCA 72 bp | ACTCCTGCAGATTGTTCTGTTTCTTCCTGTAGAGCCTaGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TPADCSVSSCRA*SILRLPLLLLL Trigger: GAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAGAACAATCTGCAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | TTTCCTCCATCAGCCTCAATCATGTGTTGTGCACTATaGACCCACACACTAACAAGCAAGCTTCTCTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FPPSASIMCCAL*THTLTSKLLYL Trigger: CAAGTAGAGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR GCA 72 bp | TATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTaGACTATGCACCCACACACTAACAAGCAAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YLVSSISLNHVL*TMHPHTNKQAS Trigger: AGAAGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTGACCATGATCGCACCACCTGCTCCGGGGTCAGGGCATGCAGGGGACCCTTCTCCCGGTTCTTACTaGGGTTCAGTGGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVTMIAPPAPGSGHAGDPSPGSY*GSVGPP Trigger: CGGAGGCCCCACTGAACCCCAGTAAGAACCGGGAGA...AGGGTCCCCTGCATGCCCTGACCCCGGAGCAGGTGGTGCGATCATGGTCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GGTACGAGGCTGCTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGCTCTGCCAGCCACACCGTGTTCCATaGGGTATCGGATGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTRLLSPVLSPQAPELCQPHRVP*GIGWSA Trigger: TGCTGACCATCCGATACCCCATGGAACACGGTGTGG...CTGGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GCCAGCACCTGCACACCTCGGTGGGCCCATGGAGGTGCGGTACACACATGCGAGTCCATGTCAGACTTGTaGATGGCGAAGGCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASTCTPRWAHGGAVHTCESMSDL*MAKART Trigger: AGTTCTGGCCTTCGCCATCCACAAGTCTGACATGGA...CTCGCATGTGTGTACCGCACCTCCATGGGCCCACCGAGGTGTGCAGGTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | AGGGTACGAGGCTGCTCTCACCTGTCCTGTCGCCTCAAGCTCCTGAGCTCTGCCTGTCTCCAAAGCCTTTaGAGAGTGTTGAGCCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVRGCSHLSCRLKLLSSACLQSL*RVLSPL Trigger: CAGGGGGCTCAACACTCTTCAAAGGCTTTGGAGACA...GGCAGAGCTCAGGAGCTTGAGGCGACAGGACAGGTGAGAGCAGCCTCGTACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CACAGGCCACAGTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTGGGTATCCCCTACCAGGTCTaGCTGGAACAGCAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRPQWHCKRVTHTSSMLGIPYQV*LEQQFR Trigger: CCTGAACTGCTGTTCCAGCCAGACCTGGTAGGGGAT...ACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCACTGTGGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | CTAGTCAGTCCTATGCAGGACATTTGCCCTGCCAGGCCAGAAAGAGGAGGCAGCCACCTCAAACTCAGCTaGGGTGTGGAAGTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPMQDICPARPERGGSHLKLS*GVEVCP Trigger: GGGGCAGACTTCCACACCTCAGCTGAGTTTGAGGTG...GCTGCCTCCTCTTTCTGGCCTGGCAGGGCAAATGTCCTGCATAGGACTGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | GCAGGAAGGTTCCAAACACGGGTGGCTGGGAGCCCATGGTGCCAGCAGGACCCTAGACGTACTGCCAGATaGGTTCCATGTCATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGRFQTRVAGSPWCQQDPRRTAR*VPCHSN Trigger: ATTGGAATGACATGGAACGCATCTGGCAGTACGTCT...AGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTTCCTCAGTTCCGATGCTCCAGCTTGGGACTGCCAGCCATGCAGCCAATTCAAAGAAGACCTCTaGCGCCTTCTCCCGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGFLSSDAPAWDCQPCSQFKEDL*RLLPVL Trigger: AAGAACCGGGAGAAGGCGGCAGAGGTCTTCTTTGAA...TTGGCTGCATGGCTGGCAGTCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | CTAGTCAGTCCTATGCAGGACATTTGCCCTGCCAGGCCAGAAAGAGGAGGCAGCCCACATCAAGCGTGCTaGCGTCTGGAAGGGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPMQDICPARPERGGSPHQAC*RLEGCT Trigger: AGTACACCCTTCCAGACGGCAGCACGCTTGATGTGG...GCTGCCTCCTCTTTCTGGCCTGGCAGGGCAAATGTCCTGCATAGGACTGACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTGACCATGATCGCACCACCTGCTCCGGGGTCAGGGCATGCAGGGGACCCTCCGTCCGACATAGTTTaGGAAACAGTACTTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTMIAPPAPGSGHAGDPPSDIV*ETVLRN Trigger: ATTCCTAAGTACTGTTTCCCAAACTATGTCGGACGG...AGGGTCCCCTGCATGCCCTGACCCCGGAGCAGGTGGTGCGATCATGGTCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCCCATGGGGTATCGGATaGTCAGCAGCCCCCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPVEPGPFSGCLSFFFSPWGIG*SAAPGA Trigger: AGCACCGGGGGCTGCTGACCATCCGATACCCCATGG...GGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTTCCTCAGTTCCGATGCTCCAGCTTGGGACTGCCAGCCATGCAGCCAACTAAAACCACTCCTGTaGTGCGTCCTGTTGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AGFLSSDAPAWDCQPCSQLKPLL*CVLLRT Trigger: TGTACGCAACAGGACGCACCACAGGAGTGGTTTTAG...TTGGCTGCATGGCTGGCAGTCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | GTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTGGGTTCCTCAGTTCCTCTGGAAGGGTGTACTaGACCTTCTCAGTCTCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VALQEGHSHQLDAGFLSSSGRVY*TFSVSR Trigger: TCTCGAGACTGAGAAGGTGCAGTACACCCTTCCAGA...GGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTCTCCCTAGCCTCCAATCCACGTaGAGTACAGCCGTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFTFLANCPSPACQRALPSLQST*STAVPE Trigger: CTCAGGAACGGCTGTACTCCACGTGGATTGGAGGCT...AGGGAGAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GTCACTGTGCCACAGACCAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTAACCCGCATGTGCTTTaGCCGTCCGACATAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVPQTNLPSLPTVPPQPNPHVL*PSDIVW Trigger: CCAAACTATGTCGGACGGCCAAAGCACATGCGGGTT...AGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CCGATGCTCCAGCTTGGGACTGCCAGCCATGCAGCCAATCATTACTCTGTGTGTAACTCAGCTGAGGTGTaGAAGTCTGCCCCTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PMLQLGTASHAANHYSVCNSAEV*KSAPSL Trigger: CAAGGAAGGGGCAGACTTCCACACCTCAGCTGAGTT...ACACACAGAGTAATGATTGGCTGCATGGCTGGCAGTCCCAAGCTGGAGCATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | CACTGTGCCACAGACCAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTGTCGTCCTTTTGTGGGTTaGTGGACAGATAGCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCATDQFTFLANCPSPACRPFVG*WTDSKL Trigger: GAGCTTGCTATCTGTCCATCAACCCACAAAAGGACG...ACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTCCTGCGAGTACAGCCGTTCCTaGGGAGCAGAGATCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPVEPGPFSGCLSFFFSCEYSRS*GAEILI Trigger: AATCAAGATCTCTGCTCCTCAGGAACGGCTGTACTC...GCAGGAGAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCTTGAAGGTATCCAGTaGGGCGAGGATGGAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSCRAWSILRLPLLLLLEGIQ*GEDGAS Trigger: GGAGGCTCCATCCTCGCCTCACTGGATACCTTCAAG...AAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTTGTGGTGCGTCCTGTTaGGTACAGGCTAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSCRAWSILRLPLLLLCGASC*VQAKHG Trigger: GCCGTGCTTAGCCTGTACGCAACAGGACGCACCACA...AAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCAAGCGTGCTGCCGTCTaGAAGGGTGTACTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPVEPGPFSGCLSFFFKRAAV*KGVLHL Trigger: AAGGTGCAGTACACCCTTCCAGACGGCAGCACGCTT...GAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GTCACTGTGCCACAGACCAATTTACCTTCCTTGCCAACTGTCCCTCCCCAGCCTAAGGCCAGAACTTCATaGAGTCCCTCACTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVPQTNLPSLPTVPPQPKARTS*SPSLSS Trigger: GGATGAGAGTGAGGGACTCCATGAAGTTCTGGCCTT...AGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CAA 72 bp | GTTTATGTCACTGTGCCACAGACCAATTTACCTTCCTaGCCAACTGTCCCTCCCCAGCCTGTCAAAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VYVTVPQTNLPS*PTVPPQPVKGL Trigger: GAGCCCTTTGACAGGCTGGGGAGGGACAGTTGGCAAGGAAGGTAAATTGGTCTGTGGCACAGTGACATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTCTTCCTGTAGAGCCTGGTCCATTCTCAGGCTGCCTCTCCTTCTTCTTCCTGCAAAGCCAGCCTTaGTCACCCCTGAACCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFLPVEPGPFSGCLSFFFLQSQP*SPLNHC Trigger: ACAATGGTTCAGGGGTGATCAAGGCTGGCTTTGCAG...GAAGAAGAAGGAGAGGCAGCCTGAGAATGGACCAGGCTCTACAGGAAGAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | GTCCATCTGACCTCTTTGGTTTATGTCACTGTGCCACAGACCAATTTACCTTCCCTGCTTTCGGTCCAATaGACAGGTCCCCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHLTSLVYVTVPQTNLPSLLSVQ*TGPPPG Trigger: CCCTGGAGGGGGACCTGTTCATTGGACCGAAAGCAG...GGAAGGTAAATTGGTCTGTGGCACAGTGACATAAACCAAAGAGGTCAGATGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR TCA 90 bp | GTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTGGGTTCCTCAGTTCCACAGTGCAGGAACATTaGAGGTTTCAAAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VALQEGHSHQLDAGFLSSTVQEH*RFQRRP Trigger: AGGTCTTCTTTGAAACCTTCAATGTTCCTGCACTGT...GGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GTCCATCTGACCTCTTTGGTTTATGTCACTGTGCCACAGACCAATTTACCTTCCCCTACCAGGTCTGGCTaGAACAGCAGTTCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLTSLVYVTVPQTNLPSPTRSG*NSSSGA Trigger: AGCCCCTGAACTGCTGTTCCAGCCAGACCTGGTAGG...GGAAGGTAAATTGGTCTGTGGCACAGTGACATAAACCAAAGAGGTCAGATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGGACTCCTGCAGATTGTTCTGTTTCTTCCTGTAGAGCCTGGTCCATTAGCCTCGTCCTTTTGTaGGTTGATGGACAGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACRTPADCSVSSCRAWSISLVLL*VDGQIA Trigger: TGCTATCTGTCCATCAACCCACAAAAGGACGAGGCT...AATGGACCAGGCTCTACAGGAAGAAACAGAACAATCTGCAGGAGTCCTGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| 3UTR CAA 72 bp | GCACAGCATCTGCTGCACACATTCCTGATCAGTGCTTaGGCCTATAGCTTTCAACACTTGGCTCTGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AQHLLHTFLISA*AYSFQHLALLT Trigger: AGTGAGCAGAGCCAAGTGTTGAAAGCTATAGGCCAAAGCACTGATCAGGAATGTGTGCAGCAGATGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | TGCTCACTACTCTTCCACAGTGAAAACTTGTCACCTAGCAAACGGTTAATGTCCAAACCACTCCTGTGGTaGGTCCTGTTGCGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLLFHSENLSPSKRLMSKPLLW*VLLRTG Trigger: GCCTGTACGCAACAGGACGCACCACAGGAGTGGTTT...GGACATTAACCGTTTGCTAGGTGACAAGTTTTCACTGTGGAAGAGTAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
||
| CDS-3UTR GCA 90 bp | TTGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTGCACTATGCACCCAAGGAATCTGGTCTCCTaGAAAGCCAGCCTTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LYLVSSISLNHVLCTMHPRNLVS*KASLDH Trigger: GTGATCAAGGCTGGCTTTGCAGGAGACCAGATTCCT...TGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR GCA 90 bp | TTTGCAGGGCCCCTTAGCACAGGCGTCTGTGTAAACTTTGATGCTGTGACCACACATGGAGATAAACAGTaGAGGAACATTGAAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FAGPLSTGVCVNFDAVTTHGDKQ*RNIEGF Trigger: GAAACCTTCAATGTTCCTGCACTGTTTATCTCCATG...TGTGGTCACAGCATCAAAGTTTACACAGACGCCTGTGCTAAGGGGCCCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR CCA 90 bp | TTGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTTGTGCACTATGCACCCACAGTACTTAGGAATCTaGTCTCCTGCAAAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LYLVSSISLNHVLCTMHPQYLGI*SPAKPA Trigger: GGCTGGCTTTGCAGGAGACCAGATTCCTAAGTACTG...TGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 72 bp | CTTCAGATCCCCCACATGCTAGTCCATCTGACCTCTTaGGTTTATGTCACTGTGCCACAGACCAATTTACCT | + |
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Preference number: 4 (lower is better) Translates to: LQIPHMLVHLTS*VYVTVPQTNLP Trigger: AGGTAAATTGGTCTGTGGCACAGTGACATAAACCAAAGAGGTCAGATGGACTAGCATGTGGGGGATCTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 72 bp | TTGTATCTTGTTTCCTCCATCAGCCTCAATCATGTGTaGTGCACTATGCACCCACACACTAACAAGCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LYLVSSISLNHV*CTMHPHTNKQA Trigger: AGCTTGCTTGTTAGTGTGTGGGTGCATAGTGCACAACACATGATTGAGGCTGATGGAGGAAACAAGATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 72 bp | AACTGGCTGGCATCTTTCTCCTTTATGATGAGCCCTTaGTATCTTGTTTCCTCCATCAGCCTCAATCATGTG | + |
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Preference number: 4 (lower is better) Translates to: NWLASFSFMMSP*YLVSSISLNHV Trigger: CACATGATTGAGGCTGATGGAGGAAACAAGATACAAAGGGCTCATCATAAAGGAGAAAGATGCCAGCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| 3UTR CAA 72 bp | ACTTGGCTCTGCTCACTACTCTTCCACAGTGAAAACTaGTCACCTAGCAAACGGTTAATGTCCTTTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TWLCSLLFHSEN*SPSKRLMSFLQ Trigger: CTGAAGAAAGGACATTAACCGTTTGCTAGGTGACAAGTTTTCACTGTGGAAGAGTAGTGAGCAGAGCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 90 bp | AGGGGCTCGGAAGCGCGCAGGCCCCACATCAAGCGTGCTGCCGTCTaGAAGGGTGTACTGCACCTTCTCAGTCTCGAGAGCCTCGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RGSEARRPHIKRAAV*KGVLHLLSLESLVL Trigger: AAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTACACCCTTCCAGACGGCAGCACGCTTGATGTGGGGCCTGCGCGCTTCCGAGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR CAA 90 bp | CAGGTGACCATGATCGCACCACCTGCTCCGGGGTCAGGGCATGCAGGGGACCCTCCTGACAGCACGATATaGGAGAAGAGTGTCCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: QVTMIAPPAPGSGHAGDPPDSTI*EKSVRR Trigger: CCGCCGGACACTCTTCTCCAATATCGTGCTGTCAGG...AGGGTCCCCTGCATGCCCTGACCCCGGAGCAGGTGGTGCGATCATGGTCACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS GCA 90 bp | CGCGCAGGCCCCACATCAAGCGTGCTGCCGTCTGGAAGGGTGTACTaGACCTTCTCAGTCTCGAGAGCCTCGTCCTTTTGTGGGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: RAGPTSSVLPSGRVY*TFSVSRASSFCGLM Trigger: CATCAACCCACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTACACCCTTCCAGACGGCAGCACGCTTGATGTGGGGCCTGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR CAA 90 bp | GCAGGAAGGTTCCAAACACGGGTGGCTGGGAGCCCATGGTGCCAGCAGGACCCTGAGAGCCTCGTCCTTTaGTGGGTTGATGGACAGATA | + |
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Preference number: 5 (lower is better) Translates to: AGRFQTRVAGSPWCQQDPESLVL*WVDGQI Trigger: TATCTGTCCATCAACCCACAAAAGGACGAGGCTCTC...AGGGTCCTGCTGGCACCATGGGCTCCCAGCCACCCGTGTTTGGAACCTTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR CAA 90 bp | GTGGCACTGCAAGAGGGTCACTCACACCAGCTCGATGCTGGGTTCCTCAGTTCCCCTGCAAAGCCAGCCTaGATCACCCCTGAACCATTG | + |
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Preference number: 5 (lower is better) Translates to: VALQEGHSHQLDAGFLSSPAKPA*ITPEPL Trigger: CAATGGTTCAGGGGTGATCAAGGCTGGCTTTGCAGG...GGAACTGAGGAACCCAGCATCGAGCTGGTGTGAGTGACCCTCTTGCAGTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 90 bp | GCTCGCTCTTTGATGGTCCGGACCACCTCAAACTCAGCTGAGGTGTaGAAGTCTGCCCCTTCCTTGCGTAGCAGCAGCCTCAGATATCGA | + |
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Preference number: 5 (lower is better) Translates to: ARSLMVRTTSNSAEV*KSAPSLRSSSLRYR Trigger: TCGATATCTGAGGCTGCTGCTACGCAAGGAAGGGGCAGACTTCCACACCTCAGCTGAGTTTGAGGTGGTCCGGACCATCAAAGAGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 90 bp | AAGGGTGTACTGCACCTTCTCAGTCTCGAGAGCCTCGTCCTTTTGTaGGTTGATGGACAGATAGCAAGCTCGCTCTTTGATGGTCCGGAC | + |
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Preference number: 5 (lower is better) Translates to: KGVLHLLSLESLVLL*VDGQIASSLFDGPD Trigger: GTCCGGACCATCAAAGAGCGAGCTTGCTATCTGTCCATCAACCCACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTACACCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS-3UTR CAA 90 bp | GCTGGGTTCCTCAGTTCCGATGCTCCAGCTTGGGACTGCCAGCCATGCAGCCAAAACAGTGCAGGAACATaGAAGGTTTCAAAGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: AGFLSSDAPAWDCQPCSQNSAGT*KVSKKT Trigger: GGTCTTCTTTGAAACCTTCAATGTTCCTGCACTGTT...TTGGCTGCATGGCTGGCAGTCCCAAGCTGGAGCATCGGAACTGAGGAACCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS TCA 90 bp | GGGCAAGCTTCTTTACTTCACTTAGTAACCTGTCTCCAAAGCCTTTaGAGAGTGTTGAGCCCCCTGACAGCACGATATTGGAGAAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: GQASLLHLVTCLQSL*RVLSPLTARYWRRV Trigger: CACTCTTCTCCAATATCGTGCTGTCAGGGGGCTCAACACTCTTCAAAGGCTTTGGAGACAGGTTACTAAGTGAAGTAAAGAAGCTTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 72 bp | GAAGCGCGCAGGCCCCACATCAAGCGTGCTGCCGTCTaGAAGGGTGTACTGCACCTTCTCAGTCTCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EARRPHIKRAAV*KGVLHLLSLES Trigger: GCTCTCGAGACTGAGAAGGTGCAGTACACCCTTCCAGACGGCAGCACGCTTGATGTGGGGCCTGCGCGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS GCA 72 bp | TGTTCCATGGGGTATCGGATGGTCAGCAGCCCCCGGTaGTCCTCTGCTTTCGGTCCAATGAACAGGTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: CSMGYRMVSSPR*SSAFGPMNRSP Trigger: GGGGGACCTGTTCATTGGACCGAAAGCAGAGGAGCACCGGGGGCTGCTGACCATCCGATACCCCATGGAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043951.10 ENSMUST00000159448.8 ENSMUST00000160084.2 |
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| CDS CCA 72 bp | AATCCCGTACCACACCGTGTTCCATGGGGTATCGGATaGTCAGCAGCCCCCGGTGCTCCTCTGCTTTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: NPVPHRVPWGIG*SAAPGAPLLSV Trigger: GACCGAAAGCAGAGGAGCACCGGGGGCTGCTGACCATCCGATACCCCATGGAACACGGTGTGGTACGGGATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043951.10 ENSMUST00000159448.8 ENSMUST00000160084.2 |
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| CDS CCA 72 bp | TTGATGGTCCGGACCACCTCAAACTCAGCTGAGGTGTaGAAGTCTGCCCCTTCCTTGCGTAGCAGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LMVRTTSNSAEV*KSAPSLRSSSL Trigger: GAGGCTGCTGCTACGCAAGGAAGGGGCAGACTTCCACACCTCAGCTGAGTTTGAGGTGGTCCGGACCATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS GCA 72 bp | CAAACTCAGCTGAGGTGTGGAAGTCTGCCCCTTCCTTaGGTAGCAGCAGCCTCAGATATCGAGAGACGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QTQLRCGSLPLP*VAAASDIERRP Trigger: GGGACGTCTCTCGATATCTGAGGCTGCTGCTACGCAAGGAAGGGGCAGACTTCCACACCTCAGCTGAGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS GCA 72 bp | CCCACATCAAGCGTGCTGCCGTCTGGAAGGGTGTACTaGACCTTCTCAGTCTCGAGAGCCTCGTCCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PTSSVLPSGRVY*TFSVSRASSFC Trigger: ACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTACACCCTTCCAGACGGCAGCACGCTTGATGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 72 bp | CCCCTCCAGGGCTCCAGCCATAACCCGCATGTGCTTTaGCCGTCCGACATAGTTTGGGAAACAGTACTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PLQGSSHNPHVL*PSDIVWETVLR Trigger: CCTAAGTACTGTTTCCCAAACTATGTCGGACGGCCAAAGCACATGCGGGTTATGGCTGGAGCCCTGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CAA 72 bp | TCAAACTCAGCTGAGGTGTGGAAGTCTGCCCCTTCCTaGCGTAGCAGCAGCCTCAGATATCGAGAGACGTCC | + |
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Preference number: 6 (lower is better) Translates to: SNSAEVWKSAPS*RSSSLRYRETS Trigger: GGACGTCTCTCGATATCTGAGGCTGCTGCTACGCAAGGAAGGGGCAGACTTCCACACCTCAGCTGAGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CAA 90 bp | TGGAAGGGTGTACTGCACCTTCTCAGTCTCGAGAGCCTCGTCCTTTaGTGGGTTGATGGACAGATAGCAAGCTCGCTCTTTGATGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: WKGVLHLLSLESLVL*WVDGQIASSLFDGP Trigger: CGGACCATCAAAGAGCGAGCTTGCTATCTGTCCATCAACCCACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTACACCCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CCA 72 bp | CTGCACCTTCTCAGTCTCGAGAGCCTCGTCCTTTTGTaGGTTGATGGACAGATAGCAAGCTCGCTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LHLLSLESLVLL*VDGQIASSLFD Trigger: ATCAAAGAGCGAGCTTGCTATCTGTCCATCAACCCACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CAA 72 bp | GTACTGCACCTTCTCAGTCTCGAGAGCCTCGTCCTTTaGTGGGTTGATGGACAGATAGCAAGCTCGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VLHLLSLESLVL*WVDGQIASSLF Trigger: AAAGAGCGAGCTTGCTATCTGTCCATCAACCCACAAAAGGACGAGGCTCTCGAGACTGAGAAGGTGCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CAA 90 bp | GGGGCAAGCTTCTTTACTTCACTTAGTAACCTGTCTCCAAAGCCTTaGAAGAGTGTTGAGCCCCCTGACAGCACGATATTGGAGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: GASFFTSLSNLSPKP*KSVEPPDSTILEKS Trigger: ACTCTTCTCCAATATCGTGCTGTCAGGGGGCTCAACACTCTTCAAAGGCTTTGGAGACAGGTTACTAAGTGAAGTAAAGAAGCTTGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS TCA 72 bp | TCTTTACTTCACTTAGTAACCTGTCTCCAAAGCCTTTaGAGAGTGTTGAGCCCCCTGACAGCACGATATTGG | + |
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Preference number: 6 (lower is better) Translates to: SLLHLVTCLQSL*RVLSPLTARYW Trigger: CCAATATCGTGCTGTCAGGGGGCTCAACACTCTTCAAAGGCTTTGGAGACAGGTTACTAAGTGAAGTAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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| CDS CAA 72 bp | TTCTTTACTTCACTTAGTAACCTGTCTCCAAAGCCTTaGAAGAGTGTTGAGCCCCCTGACAGCACGATATTG | + |
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Preference number: 6 (lower is better) Translates to: FFTSLSNLSPKP*KSVEPPDSTIL Trigger: CAATATCGTGCTGTCAGGGGGCTCAACACTCTTCAAAGGCTTTGGAGACAGGTTACTAAGTGAAGTAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043951.10 |
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