Pregenerated sensors for ACTR10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021076Ensembl transcript IDs: ENSMUST00000021479.6, ENSMUST00000220582.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACTAGGTTGGCCTGAGATGTGCCTGCCCCTGCCTTTTAAGTGCTaGGATGAAAGGTGTGCACCACCACTGCCTGGCTACCGGGTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: RLGWPEMCLPLPFKC*DERCAPPLPGYRVL Trigger: AAGAACCCGGTAGCCAGGCAGTGGTGGTGCACACCTTTCATCTCAGCACTTAAAAGGCAGGGGCAGGCACATCTCAGGCCAACCTAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTaGCGCCCTCTTCTGGTGTGTCTGAAAACAGCTACAGTGTACTTA | + |
|
Preference number: 1 (lower is better) Translates to: IPATTWWLTTIRNEI*RPLLVCLKTATVYL Trigger: TAAGTACACTGTAGCTGTTTTCAGACACACCAGAAGAGGGCGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR TCA 90 bp | AGGAGCTTCTGCTCCAGACAGAAGATGACAACAGTGTCAAAGCAATaGCGATCAGTGCCTATGACAGATGTGCTCAGGACGACAGACATC | + |
|
Preference number: 1 (lower is better) Translates to: RSFCSRQKMTTVSKQ*RSVPMTDVLRTTDI Trigger: GATGTCTGTCGTCCTGAGCACATCTGTCATAGGCACTGATCGTCATTGCTTTGACACTGTTGTCATCTTCTGTCTGGAGCAGAAGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR TCA 90 bp | TGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGCTATGTAATTaGGGTTGCCTTGAACTCCTGATCACCCCTCCTCTAACTCCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: WNFIETRLGSNLLCN*GCLELLITPPLTPK Trigger: CTTGGGAGTTAGAGGAGGGGTGATCAGGAGTTCAAGGCAACCTCAATTACATAGCAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CCA 90 bp | ACCTCAAAATATTTAAAAAGAACACGAGTCAGAGTCTCTCTGAAGTaGGAAGGACATAACACCGACTCGATAACCACAACGCGGCGGTCT | + |
|
Preference number: 1 (lower is better) Translates to: TSKYLKRTRVRVSLK*EGHNTDSITTTRRS Trigger: AGACCGCCGCGTTGTGGTTATCGAGTCGGTGTTATGTCCTTCCCACTTCAGAGAGACTCTGACTCGTGTTCTTTTTAAATATTTTGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR GCA 90 bp | TTGAACTCCTGGGTTTGGATAATACTACATCTGACAGACTCCATATaGGTGCCAGCATGCACAACTGGGGACTTAAAATATTTCTTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: LNSWVWIILHLTDSI*VPACTTGDLKYFLQ Trigger: TTGCAAGAAATATTTTAAGTCCCCAGTTGTGCATGCTGGCACGCATATGGAGTCTGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR GCA 90 bp | AACATAAAGTTCAAAAGTATCTATTTCTACACCTTGCATAGTGAATaGCTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: NIKFKSIYFYTLHSE*LALLSNSLKDLKFH Trigger: ATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAGGCATTCACTATGCAAGGTGTAGAAATAGATACTTTTGAACTTTATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTTCCAACTCCTTGTGGAGAGCTTTTCCTCCTAACGGCAGTGCTCCCCAGCTCCAAGCGTCAGCAGTaGCATCAGATGACTTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EFPTPCGELFLLTAVLPSSKRQQ*HQMTWS Trigger: GCTCCAAGTCATCTGATGGCACTGCTGACGCTTGGA...GCTGGGGAGCACTGCCGTTAGGAGGAAAAGCTCTCCACAAGGAGTTGGAAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCAACACCAGGCTTTCCCTATATCCACAATCCAGGACCATGGCCGAATTAATTCAACGCGGCGGTCTCTaGGATTCACCAACAGATGCC | + |
|
Preference number: 2 (lower is better) Translates to: GNTRLSLYPQSRTMAELIQRGGL*DSPTDA Trigger: GGCATCTGTTGGTGAATCCCAGAGACCGCCGCGTTG...AATTAATTCGGCCATGGTCCTGGATTGTGGATATAGGGAAAGCCTGGTGTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCTTGTGGAGAGCTTTTCCTCCTAACGGCAGTGCTCCCCAGCAATTCAGTAAGAGTCTCTCTGAAGTaGGAAGGACATAACACCGAC | + |
|
Preference number: 2 (lower is better) Translates to: TPCGELFLLTAVLPSNSVRVSLK*EGHNTD Trigger: GTCGGTGTTATGTCCTTCCCACTTCAGAGAGACTCT...TACTGAATTGCTGGGGAGCACTGCCGTTAGGAGGAAAAGCTCTCCACAAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGGCAGCTCCAGGGACCTaGTGCTTCCTGTCTCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: KIILWRWNFIETRLGSNLAAPGT*CFLSPQ Trigger: CTGTGGAGACAGGAAGCATCAGGTCCCTGGAGCTGC...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTACATTGTTCCAACAGCTGAGTTTCCAACTCCTTGTGGAGAGCTTTTCCTCCAGCAGTGCCATCAGATaGCTTGGAGCAAGTAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: STLFQQLSFQLLVESFSSSSAIR*LGASRT Trigger: TGTCCTACTTGCTCCAAGTCATCTGATGGCACTGCT...GGAGGAAAAGCTCTCCACAAGGAGTTGGAAACTCAGCTGTTGGAACAATGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGGTTCCTACCCATGAGTaGGCAGGCGCGCACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: KIILWRWNFIETRLGSNLVPTHE*AGAHTH Trigger: GTGTGTGTGCGCGCCTGCGCACTCATGGGTAGGAAC...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATGGTTGGCCTGAGATGTaGCTGCCCCTGCCTTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYGWPEM*LPLPFK Trigger: CTTAAAAGGCAGGGGCAGGCACATCTCAGGCCAACC...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGCATGACTCAACAGAATaGCCGCAGCTCCAGGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: KIILWRWNFIETRLGSNLHDSTE*PQLQGP Trigger: AGGTCCCTGGAGCTGCGGTCATTCTGTTGAGTCATG...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGAAAGGTGTGCACCACCACTGCCTGGCTACCGGGTTCTTCTTTTCCTACTTGATCATGTTAGAATGTaGAATAACAGATTGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DERCAPPLPGYRVLLFLLDHVRM*NNRLVR Trigger: CCTCACCAATCTGTTATTTCACATTCTAACATGATC...AAGTAGGAAAAGAAGAACCCGGTAGCCAGGCAGTGGTGGTGCACACCTTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGGTCTCCACAGGCACCTaGATCCATATGCACACACGC | + |
|
Preference number: 2 (lower is better) Translates to: KIILWRWNFIETRLGSNLVSTGT*IHMHTR Trigger: GCGTGTGTGCATATGGATGCAGGTGCCTGTGGAGAC...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGATACTCGGCAGATTATaGGAACTGGAGGAAACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LALLSNSLKDLKFHGHTVILGRL*ELEETA Trigger: TGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTAT...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTCGAAATCACAGCACATaGCTCAACAGAATGACCGCA | + |
|
Preference number: 2 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSRNHST*LNRMTA Trigger: TGCGGTCATTCTGTTGAGTCATGTGCTGTGATTTCG...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR GCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTGCACCTGCATCCATATaGACACACGCTCCTATACAT | + |
|
Preference number: 2 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSAPASI*THAPIH Trigger: ATGTATAGGAGCGTGTGTGCATATGGATGCAGGTGC...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTCTTTTGTGTGACCATTaGTGTGCAAATCTGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSMLKVKDTEPCPLGALLCDH*CANLFL Trigger: TAGAAACAGATTTGCACACCAATGGTCACACAAAAG...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | TGCACCAGTGTCAACAGTACATTGTTCCAACAGCTGAGTTTCCAACTCCTTGTGCCAGCAATTCAGTATTaGGATGCCTTCATAGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: CTSVNSTLFQQLSFQLLVPAIQY*DAFIDR Trigger: CCTATCTATGAAGGCATCCCAATACTGAATTGCTGG...CACAAGGAGTTGGAAACTCAGCTGTTGGAACAATGTACTGTTGACACTGGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR CAA 90 bp | GTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATAGAACCCAAGTaGGTCTTGAACTCCTGGGTTTGGATAATACTACATCTGACAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VSVCVCYQDLSIEPK*VLNSWVWIILHLTD Trigger: GTCTGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACTGAGATCCTGATAACACACACACACAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATACACCCACCCCGTCTTaGGGAAGTTCATTAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYTPTPS*GSSLNK Trigger: TTTGTTTAATGAACTTCCTCAAGACGGGGTGGGTGT...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTGCTCCAGACAGAAGATaGCAACAGTGTCAAAGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSAPDRR*QQCQSN Trigger: ATTGCTTTGACACTGTTGTCATCTTCTGTCTGGAGC...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR GCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCACTGACAGACTCCATATaGGTGCCAGCATGCACAACT | + |
|
Preference number: 2 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSLTDSI*VPACTT Trigger: AGTTGTGCATGCTGGCACGCATATGGAGTCTGTCAG...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTTGCACCACCACTGCCTaGCTACCGGGTTCTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSCTTTA*LPGSSF Trigger: AAAAGAAGAACCCGGTAGCCAGGCAGTGGTGGTGCA...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATGCCAGCATGCACAACTaGGGACTTAAAATATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYASMHN*GLKIFL Trigger: AAGAAATATTTTAAGTCCCCAGTTGTGCATGCTGGC...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTAAAAAGAACCTGAAATaGCTGCAAAGGCTAACATTC | + |
|
Preference number: 2 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSKKNLK*LQRLTF Trigger: GAATGTTAGCCTTTGCAGTCATTTCAGGTTCTTTTT...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATTTGGTTTTTCAAGACTaGGTTTCTCTGTATAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYLVFQD*VSLYST Trigger: AGTGCTATACAGAGAAACCCAGTCTTGAAAAACCAA...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTGTCTTCCAGAGGACTTaGTTTTGGTTCCTCGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSVFQRT*FWFLEI Trigger: GATTTCGAGGAACCAAAATCAAGTCCTCTGGAAGAC...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CAA 90 bp | TTCATGCTCTTGAACATAAAGTTCAAAAGTATCTATTTCTACACCTaGCATAGTGAATGCCTGGCCCTGCTATCAAACAGTCTGAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FMLLNIKFKSIYFYT*HSECLALLSNSLKD Trigger: ATCTTTCAGACTGTTTGATAGCAGGGCCAGGCATTCACTATGCAAGGTGTAGAAATAGATACTTTTGAACTTTATGTTCAAGAGCATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCATGGGTCCATGTAAATTaGGTATTTACAGTGTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSWVHVN*VFTVYL Trigger: AAGGTACACTGTAAATACTCAATTTACATGGACCCA...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CCA 72 bp | CACTGGCTGTCCTGGAACTTGTTCTATAGACTAGGTTaGCCTGAGATGTGCCTGCCCCTGCCTTTTAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HWLSWNLFYRLG*PEMCLPLPFKC Trigger: GCACTTAAAAGGCAGGGGCAGGCACATCTCAGGCCAACCTAGTCTATAGAACAAGTTCCAGGACAGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCCGTAACGAGATCTaGCGCCCTCTTCTGGTGTGTCTGAAAACAGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTIRNEI*RPLLVCLKTAT Trigger: TGTAGCTGTTTTCAGACACACCAGAAGAGGGCGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR TCA 72 bp | CCCTGTCCTTTAGGAGCTTCTGCTCCAGACAGAAGATaGCAACAGTGTCAAAGCAATGACGATCAGTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PCPLGASAPDRR*QQCQSNDDQCL Trigger: TAGGCACTGATCGTCATTGCTTTGACACTGTTGTCATCTTCTGTCTGGAGCAGAAGCTCCTAAAGGACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACATCTATTTCTACACCTaGCATAGTGAATGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MLKVKDTEPCPLGASAPDIYFYT*HSECLA Trigger: GGCCAGGCATTCACTATGCAAGGTGTAGAAATAGAT...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CCA 72 bp | AGTATAGAACCCAAGTTGGTCTTGAACTCCTGGGTTTaGATAATACTACATCTGACAGACTCCATATGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SIEPKLVLNSWV*IILHLTDSICV Trigger: CACGCATATGGAGTCTGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CCA 72 bp | TATTTAAAAAGAACACGAGTCAGAGTCTCTCTGAAGTaGGAAGGACATAACACCGACTCGATAACCACAACG | + |
|
Preference number: 3 (lower is better) Translates to: YLKRTRVRVSLK*EGHNTDSITTT Trigger: CGTTGTGGTTATCGAGTCGGTGTTATGTCCTTCCCACTTCAGAGAGACTCTGACTCGTGTTCTTTTTAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| 3UTR CCA 72 bp | GATCTCAGTATAGAACCCAAGTTGGTCTTGAACTCCTaGGTTTGGATAATACTACATCTGACAGACTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: DLSIEPKLVLNS*VWIILHLTDSI Trigger: TATGGAGTCTGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACTGAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR GCA 72 bp | TTCAAAAGTATCTATTTCTACACCTTGCATAGTGAATaGCTGGCCCTGCTATCAAACAGTCTGAAAGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FKSIYFYTLHSE*LALLSNSLKDL Trigger: CAGATCTTTCAGACTGTTTGATAGCAGGGCCAGGCATTCACTATGCAAGGTGTAGAAATAGATACTTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR GCA 72 bp | ATACTACATCTGACAGACTCCATATGCGTGCCAGCATaGACAACTGGGGACTTAAAATATTTCTTGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILHLTDSICVPA*TTGDLKYFLQK Trigger: TTTTTGCAAGAAATATTTTAAGTCCCCAGTTGTGCATGCTGGCACGCATATGGAGTCTGTCAGATGTAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CCA 72 bp | AGTAAAATTAGGGGGTTTCTAATACTCGGCAGATTATaGGAACTGGAGGAAACTGCACTACATAATAAACTA | + |
|
Preference number: 3 (lower is better) Translates to: SKIRGFLILGRL*ELEETALHNKL Trigger: TAGTTTATTATGTAGTGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTATTAGAAACCCCCTAATTTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | GTATACACACCAGAACCTGTGTTAGTTCCTACCCATGAGTGCGCAGGCGCGCACCACGCTTCAGATCACTaGCAAAGCACGTGCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VYTPEPVLVPTHECAGAHHASDH*QSTCAL Trigger: AAGTGCGCACGTGCTTTGTCAGTGATCTGAAGCGTG...GTGCGCGCCTGCGCACTCATGGGTAGGAACTAACACAGGTTCTGGTGTGTATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | GTATACACACCAGAACCTGTGTTAGTTCCTACCCATGAGTGCGCAGGCGCGCACTGGACCAGTTTCTCCTaGGAATCCACACTTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYTPEPVLVPTHECAGAHWTSFS*ESTLGE Trigger: TTCACCAAGTGTGGATTCGCAGGAGAAACTGGTCCA...GTGCGCGCCTGCGCACTCATGGGTAGGAACTAACACAGGTTCTGGTGTGTATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTCAACGCGGCGGTCTCTaGGATTCACCAACAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSQRGGL*DSPTDA Trigger: GGCATCTGTTGGTGAATCCCAGAGACCGCCGCGTTG...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTAGAGTCTCTCTGAAGTaGGAAGGACATAACACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSMLKVKDTEPCPLGARVSLK*EGHNTD Trigger: GTCGGTGTTATGTCCTTCCCACTTCAGAGAGACTCT...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CAA 72 bp | GCTCTGTCCTTTAGCTGCACCAGTGTCAACAGTACATaGTTCCAACAGCTGAGTTTCCAACTCCTTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSFSCTSVNST*FQQLSFQLLVE Trigger: CTCCACAAGGAGTTGGAAACTCAGCTGTTGGAACAATGTACTGTTGACACTGGTGCAGCTAAAGGACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTTTGCAGGTGGAGTATaGATTCGGAAGTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSMLKVKDTEPCPLGAFAGGV*IRKFLV Trigger: CACCAAGAACTTCCGAATTCATACTCCACCTGCAAA...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACAAATTCTCTGCCAGTTaGTTCCTGGTGTCTATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLKVKDTEPCPLGASAPDKFSAS*FLVSIG Trigger: CCCAATAGACACCAGGAAGCAACTGGCAGAGAATTT...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACGTCAACATTTGGAGGTaGAGTGGGACGCTCATTATT | + |
|
Preference number: 4 (lower is better) Translates to: MLKVKDTEPCPLGASAPDVNIWR*SGTLII Trigger: AATAATGAGCGTCCCACTCCACCTCCAAATGTTGAC...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACCTGAACAACTTTGATTaGCTTAGACATGCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLKVKDTEPCPLGASAPDLNNFD*LRHASS Trigger: AGAGCTGGCATGTCTAAGCCAATCAAAGTTGTTCAG...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTAGTATTCCTTTGAAATaGAGCGGCTCCCAAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSMLKVKDTEPCPLGASIPLK*SGSQEC Trigger: ACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACT...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTAGCAGTGCCATCAGATaGCTTGGAGCAAGTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSSSAIR*LGASRT Trigger: TGTCCTACTTGCTCCAAGTCATCTGATGGCACTGCT...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGGTTATAGTATTCCTTTaGAATGGAGCGGCTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LALLSNSLKDLKFHGHTVVIVFL*NGAAPK Trigger: CTTGGGAGCCGCTCCATTTCAAAGGAATACTATAAC...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | GGCAACACCAGGCTTTCCCTATATCCACAATCCAGGACCATGGCCGAATTAATTCTGAACAACTTTGATTaGTTGGTGAAAGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNTRLSLYPQSRTMAELILNNFD*LVKASP Trigger: AGGAGAAGCTTTCACCAACCAATCAAAGTTGTTCAG...AATTAATTCGGCCATGGTCCTGGATTGTGGATATAGGGAAAGCCTGGTGTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGTTCGGAAGTTCTTGGTaGCAAGTGTCTTTTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LALLSNSLKDLKFHGHTVFGSSW*QVSFCT Trigger: AGTACAAAAAGACACTTGGCACCAAGAACTTCCGAA...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CAA 72 bp | CAGTATAGAACCCAAGTTGGTCTTGAACTCCTGGGTTaGGATAATACTACATCTGACAGACTCCATATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QYRTQVGLELLG*DNTTSDRLHMR Trigger: ACGCATATGGAGTCTGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGGAGTCAGAGTCTCTCTaGAGTGGGAAGGACATAACA | + |
|
Preference number: 4 (lower is better) Translates to: KIILWRWNFIETRLGSNLESESL*SGKDIT Trigger: TGTTATGTCCTTCCCACTTCAGAGAGACTCTGACTC...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATCCACAACTGAATCTCTaGTTGATCCAAGCACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYPQLNL*LIQAHV Trigger: TACATGTGCTTGGATCAATCAGAGATTCAGTTGTGG...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR TCA 90 bp | AACACCAGGCTTTCCCTATATCCACAATCCAGGACCATGGCCGAATTAATTCCATATACTGAACAACTTTaGTTGGTTGGTGAAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTRLSLYPQSRTMAELIPYTEQL*LVGESF Trigger: GAAGCTTTCACCAACCAATCAAAGTTGTTCAGTATA...TGGAATTAATTCGGCCATGGTCCTGGATTGTGGATATAGGGAAAGCCTGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220582.2 |
||
| CDS-3UTR GCA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTTCCAAGCGTCAGCAGTaGCATCAGATGACTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSSKRQQ*HQMTWS Trigger: GCTCCAAGTCATCTGATGGCACTGCTGACGCTTGGA...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGCTCTGTCCTTTAGCTaGACCAGTGTCAACAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSALSFS*TSVNST Trigger: TGTACTGTTGACACTGGTGCAGCTAAAGGACAGAGC...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTCCAGCAATTCAGTATTaGGATGCCTTCATAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSPAIQY*DAFIDR Trigger: CCTATCTATGAAGGCATCCCAATACTGAATTGCTGG...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGATTAGCTTTTGCAGGTaGAGTATGAATTCGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LALLSNSLKDLKFHGHTVISFCR*SMNSEV Trigger: AACTTCCGAATTCATACTCCACCTGCAAAAGCTAAT...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGAATATTAAATTTTGCTaGTTGGATTTGCAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LALLSNSLKDLKFHGHTVNIKFC*LDLQST Trigger: CGTGGACTGCAAATCCAAGCAGCAAAATTTAATATT...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAAAGAATGTCTTGCAATaGTCCAAAAACAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSKNVLQ*SKNSPS Trigger: GGAGGGGCTGTTTTTGGAGCATTGCAAGACATTCTT...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | AAAATTATTTTGTGGAGATGGAATTTCATAGAAACCAGACTGGGCTCCAACCTGCTCCCAAGAATGTCTTaGAATGCTCCAAAAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIILWRWNFIETRLGSNLLPRMS*NAPKTA Trigger: GGCTGTTTTTGGAGCATTGCAAGACATTCTTGGGAG...CAGGTTGGAGCCCAGTCTGGTTTCTATGAAATTCCATCTCCACAAAATAATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCATTTCTCAGTGGAAAATaGCCTTTTCATCAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSFLSGK*PFHQRW Trigger: CCACCGCTGATGAAAAGGGCATTTTCCACTGAGAAA...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | ATACTCGGCAGATTATGGGAACTGGAGGAAACTGCACTACATAATAAACTAATATTTGCTGCTTGGATTTaGAGTCCACGCTTCAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGRLWELEETALHNKLIFAAWI*SPRFRS Trigger: TGATCTGAAGCGTGGACTGCAAATCCAAGCAGCAAA...TATTAGTTTATTATGTAGTGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | ATACTCGGCAGATTATGGGAACTGGAGGAAACTGCACTACATAATAAACTAATAGATTACCAAATTCTCTaGCAGTTGCTTCCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGRLWELEETALHNKLIDYQIL*QLLPGV Trigger: GACACCAGGAAGCAACTGGCAGAGAATTTGGTAATC...TATTAGTTTATTATGTAGTGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR GCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTCAAATACCGTATTTCTaGAAGCAATCTGTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSQIPYF*KQSVEK Trigger: TTTCTCCACAGATTGCTTGCAGAAATACGGTATTTG...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | AAATCAGTACAAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAAGGAATTATACATCGTaGACCAGTTTCTCCTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVQMQSRGFCVCVCVLSRNYTS*TSFSCE Trigger: TTCGCAGGAGAAACTGGTCCACGATGTATAATTCCT...TGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTTGTACTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CAA 72 bp | TGTTATCAGGATCTCAGTATAGAACCCAAGTTGGTCTaGAACTCCTGGGTTTGGATAATACTACATCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CYQDLSIEPKLV*NSWVWIILHLT Trigger: TGTCAGATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACTGAGATCCTGATAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| 3UTR CAA 72 bp | TGTGTGTGTTATCAGGATCTCAGTATAGAACCCAAGTaGGTCTTGAACTCCTGGGTTTGGATAATACTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCYQDLSIEPK*VLNSWVWIILH Trigger: ATGTAGTATTATCCAAACCCAGGAGTTCAAGACCAACTTGGGTTCTATACTGAGATCCTGATAACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTGTTTCCAACTCCTTGTaGAGAGCTTTTCCTCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSVSNSL*RAFPPN Trigger: GTTAGGAGGAAAAGCTCTCCACAAGGAGTTGGAAAC...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTAATCCAAAATTAAAGTaGCAACTGACTTCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSNPKLK*QLTSPH Trigger: ATGAGGAGAAGTCAGTTGCCACTTTAATTTTGGATT...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CCA 90 bp | ATACTCGGCAGATTATGGGAACTGGAGGAAACTGCACTACATAATAAACTAATATTAAATTTTGCTGCTTaGATTTGCAGTCCACGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGRLWELEETALHNKLILNFAA*ICSPRF Trigger: GAAGCGTGGACTGCAAATCCAAGCAGCAAAATTTAA...TATTAGTTTATTATGTAGTGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | GTATACACACCAGAACCTGTGTTAGTTCCTACCCATGAGTGCGCAGGCGCGCACCCTGCGAATCCACACTaGGTGAAAGCTTCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VYTPEPVLVPTHECAGAHPANPH*VKASPR Trigger: CCTAGGAGAAGCTTTCACCAAGTGTGGATTCGCAGG...GTGCGCGCCTGCGCACTCATGGGTAGGAACTAACACAGGTTCTGGTGTGTATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | GTATACACACCAGAACCTGTGTTAGTTCCTACCCATGAGTGCGCAGGCGCGCACGCTTCCTGGTGTCTATaGGGCACTGTAAAAGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VYTPEPVLVPTHECAGAHASWCL*GTVKGN Trigger: ATTCCCTTTTACAGTGCCCAATAGACACCAGGAAGC...GTGCGCGCCTGCGCACTCATGGGTAGGAACTAACACAGGTTCTGGTGTGTATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS TCA 90 bp | GTTGCGCTTTCCCCACATCAAACATCATTTCCAGGGGAGGGTTGTTaGGAGAGCACCAGTCAGGTATGCGGCCCGTCTGGTTATAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VALSPHQTSFPGEGC*ESTSQVCGPSGYSI Trigger: AATACTATAACCAGACGGGCCGCATACCTGACTGGTGCTCTCTCAACAACCCTCCCCTGGAAATGATGTTTGATGTGGGGAAAGCGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 90 bp | ACCAGTCAGGTATGCGGCCCGTCTGGTTATAGTATTCCTTTGAAATaGAGCGGCTCCCAAGAATGTCTTGCAATGCTCCAAAAACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TSQVCGPSGYSIPLK*SGSQECLAMLQKQP Trigger: GGGCTGTTTTTGGAGCATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATACCTGACTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS TCA 90 bp | AGAGCACCAGTCAGGTATGCGGCCCGTCTGGTTATAGTATTCCTTTaGAATGGAGCGGCTCCCAAGAATGTCTTGCAATGCTCCAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RAPVRYAARLVIVFL*NGAAPKNVLQCSKN Trigger: GTTTTTGGAGCATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATACCTGACTGGTGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACTTTTGCTGCTTGGATTaGCAGTCCACGCTTCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: MLKVKDTEPCPLGASAPDFCCLD*QSTLQI Trigger: GATCTGAAGCGTGGACTGCAAATCCAAGCAGCAAAA...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | ATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATTCCAGGGGAGGGTTGTaGAGAGAGCACCAGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MQSRGFCVCVCVLSGSQYSRGGL*REHQSG Trigger: ACCTGACTGGTGCTCTCTCAACAACCCTCCCCTGGA...ATACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTAGTGTCAACAGTACATaGTTCCAACAGCTGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSMLKVKDTEPCPLGASVNST*FQQLSF Trigger: GAAACTCAGCTGTTGGAACAATGTACTGTTGACACT...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTTCTGCTCCAGACGTGCCAAGTGTCTTTTaGTACTTTGGCTTTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: MLKVKDTEPCPLGASAPDVPSVF*YFGFST Trigger: GGTAGAAAAGCCAAAGTACAAAAAGACACTTGGCAC...GTCTGGAGCAGAAGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | CTGGCCCTGCTATCAAACAGTCTGAAAGATCTGAAGTTTCATGGGCATACAGTGGCTCCCAAGAATGTCTaGCAATGCTCCAAAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LALLSNSLKDLKFHGHTVAPKNV*QCSKNS Trigger: GCTGTTTTTGGAGCATTGCAAGACATTCTTGGGAGC...CACTGTATGCCCATGAAACTTCAGATCTTTCAGACTGTTTGATAGCAGGGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | AAATGCAGAGTAGAGGGTTTTGTGTCTGTGTGTGTGTGTTATCAGGATCTCAGTATGGATAGTCAACATTaGGAGGTGGAGTGGGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: KCRVEGFVSVCVCYQDLSMDSQH*EVEWDA Trigger: AGCGTCCCACTCCACCTCCAAATGTTGACTATCCAT...ACTGAGATCCTGATAACACACACACACAGACACAAAACCCTCTACTCTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS GCA 90 bp | TGGAGGTGGAGTGGGACGCTCATTATTCCCATCAATATTAAATTTTaGTGCTTGGATTTGCAGTCCACGCTTCAGATCACTGACAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: WRWSGTLIIPINIKF*CLDLQSTLQITDKA Trigger: TGCTTTGTCAGTGATCTGAAGCGTGGACTGCAAATCCAAGCAGCAAAATTTAATATTGATGGGAATAATGAGCGTCCCACTCCACCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS GCA 90 bp | GGCAACATAGATGTGCCACCGATGATTACCAAATTCTCTGCCAGTTaGTTCCTGGTGTCTATTGGGCACTGTAAAAGGGAATCCAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GNIDVPPMITKFSAS*FLVSIGHCKRESKI Trigger: AATTTTGGATTCCCTTTTACAGTGCCCAATAGACACCAGGAAGCAACTGGCAGAGAATTTGGTAATCATCGGTGGCACATCTATGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 90 bp | CTTAGACATGCCAGCTCTTTTTATCACACTAGGAATTATACATCGTaGACCAGTTTCTCCTGCGAATCCACACTTGGTGAAAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRHASSFYHTRNYTS*TSFSCESTLGESFS Trigger: GGAGAAGCTTTCACCAAGTGTGGATTCGCAGGAGAAACTGGTCCACGATGTATAATTCCTAGTGTGATAAAAAGAGCTGGCATGTCTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCTTAGCATGCTCAAAGTCAAAGACACTGAGCCCTGTCCTTTAGGAGCTCTTCTCCTCATTATCTaGTTCAAAAAGGATTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSMLKVKDTEPCPLGALLLII*FKKDFH Trigger: GTGGAAATCCTTTTTGAACAAGATAATGAGGAGAAG...AGCTCCTAAAGGACAGGGCTCAGTGTCTTTGACTTTGAGCATGCTAAGGCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | ATACTCGGCAGATTATGGGAACTGGAGGAAACTGCACTACATAATAAACTAATAATTTCCAGGGGAGGGTaGTTGAGAGAGCACCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILGRLWELEETALHNKLIISRGG*LREHQS Trigger: TGACTGGTGCTCTCTCAACAACCCTCCCCTGGAAAT...TATTAGTTTATTATGTAGTGCAGTTTCCTCCAGTTCCCATAATCTGCCGAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 90 bp | AGTATGAATTCGGAAGTTCTTGGTGCCAAGTGTCTTTTTGTACTTTaGCTTTTCTACCAAATACCGTATTTCTGCAAGCAATCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMNSEVLGAKCLFVL*LFYQIPYFCKQSVE Trigger: CTCCACAGATTGCTTGCAGAAATACGGTATTTGGTAGAAAAGCCAAAGTACAAAAAGACACTTGGCACCAAGAACTTCCGAATTCATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTGGTTATAGTATTCCTTaGAAATGGAGCGGCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSGYSIP*KWSGSQ Trigger: TTGGGAGCCGCTCCATTTCAAAGGAATACTATAACC...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS-3UTR CAA 90 bp | GATGTTATCGAAATAGTGGGTCCATGTAAATTGAGTATTTACAGTGTACCTTCTATTAAATTTTGCTGCTaGGATTTGCAGTCCACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DVIEIVGPCKLSIYSVPSIKFCC*DLQSTL Trigger: AAGCGTGGACTGCAAATCCAAGCAGCAAAATTTAAT...AGAAGGTACACTGTAAATACTCAATTTACATGGACCCACTATTTCGATAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS TCA 72 bp | TCCCCACATCAAACATCATTTCCAGGGGAGGGTTGTTaGGAGAGCACCAGTCAGGTATGCGGCCCGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPHQTSFPGEGC*ESTSQVCGPSG Trigger: ACCAGACGGGCCGCATACCTGACTGGTGCTCTCTCAACAACCCTCCCCTGGAAATGATGTTTGATGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CAA 72 bp | TTCCCCACATCAAACATCATTTCCAGGGGAGGGTTGTaGAGAGAGCACCAGTCAGGTATGCGGCCCGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPTSNIISRGGL*REHQSGMRPVW Trigger: CCAGACGGGCCGCATACCTGACTGGTGCTCTCTCAACAACCCTCCCCTGGAAATGATGTTTGATGTGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS GCA 72 bp | AACAGCCCCTCCCAACCAGGCCACACAATTAGCTTTTaGAGGTGGAGTATGAATTCGGAAGTTCTTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NSPSQPGHTISF*RWSMNSEVLGA Trigger: GGCACCAAGAACTTCCGAATTCATACTCCACCTGCAAAAGCTAATTGTGTGGCCTGGTTGGGAGGGGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS TCA 72 bp | GTCAGGTATGCGGCCCGTCTGGTTATAGTATTCCTTTaGAATGGAGCGGCTCCCAAGAATGTCTTGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: VRYAARLVIVFL*NGAAPKNVLQC Trigger: GCATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATACCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 72 bp | CCCTCCCAACCAGGCCACACAATTAGCTTTTGCAGGTaGAGTATGAATTCGGAAGTTCTTGGTGCCAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSQPGHTISFCR*SMNSEVLGAKC Trigger: ACACTTGGCACCAAGAACTTCCGAATTCATACTCCACCTGCAAAAGCTAATTGTGTGGCCTGGTTGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CAA 90 bp | GAGAGCACCAGTCAGGTATGCGGCCCGTCTGGTTATAGTATTCCTTaGAAATGGAGCGGCTCCCAAGAATGTCTTGCAATGCTCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ESTSQVCGPSGYSIP*KWSGSQECLAMLQK Trigger: TTTTTGGAGCATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATACCTGACTGGTGCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 72 bp | GTATGCGGCCCGTCTGGTTATAGTATTCCTTTGAAATaGAGCGGCTCCCAAGAATGTCTTGCAATGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VCGPSGYSIPLK*SGSQECLAMLQ Trigger: TTGGAGCATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CAA 72 bp | AGTCAGGTATGCGGCCCGTCTGGTTATAGTATTCCTTaGAAATGGAGCGGCTCCCAAGAATGTCTTGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SQVCGPSGYSIP*KWSGSQECLAM Trigger: CATTGCAAGACATTCTTGGGAGCCGCTCCATTTCAAAGGAATACTATAACCAGACGGGCCGCATACCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS GCA 72 bp | GATGTGCCACCGATGATTACCAAATTCTCTGCCAGTTaGTTCCTGGTGTCTATTGGGCACTGTAAAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DVPPMITKFSAS*FLVSIGHCKRE Trigger: TTCCCTTTTACAGTGCCCAATAGACACCAGGAAGCAACTGGCAGAGAATTTGGTAATCATCGGTGGCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS TCA 72 bp | AACCAGGCCACACAATTAGCTTTTGCAGGTGGAGTATaGATTCGGAAGTTCTTGGTGCCAAGTGTCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: NQATQLAFAGGV*IRKFLVPSVFL Trigger: CAAAAAGACACTTGGCACCAAGAACTTCCGAATTCATACTCCACCTGCAAAAGCTAATTGTGTGGCCTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 72 bp | GCCAGCTCTTTTTATCACACTAGGAATTATACATCGTaGACCAGTTTCTCCTGCGAATCCACACTTGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSFYHTRNYTS*TSFSCESTLGE Trigger: TTCACCAAGTGTGGATTCGCAGGAGAAACTGGTCCACGATGTATAATTCCTAGTGTGATAAAAAGAGCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CAA 72 bp | GTAAAATTTTCTCTCCATCCAATGGATAGTCAACATTaGGAGGTGGAGTGGGACGCTCATTATTCCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: VKFSLHPMDSQH*EVEWDAHYSHQ Trigger: TTGATGGGAATAATGAGCGTCCCACTCCACCTCCAAATGTTGACTATCCATTGGATGGAGAGAAAATTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CAA 90 bp | GAGTATGAATTCGGAAGTTCTTGGTGCCAAGTGTCTTTTTGTACTTaGGCTTTTCTACCAAATACCGTATTTCTGCAAGCAATCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EYEFGSSWCQVSFCT*AFLPNTVFLQAICG Trigger: TCCACAGATTGCTTGCAGAAATACGGTATTTGGTAGAAAAGCCAAAGTACAAAAAGACACTTGGCACCAAGAACTTCCGAATTCATACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||
| CDS CCA 72 bp | TTTCTCTCCATCCAATGGATAGTCAACATTTGGAGGTaGAGTGGGACGCTCATTATTCCCATCAATATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLSIQWIVNIWR*SGTLIIPINIK Trigger: TTTAATATTGATGGGAATAATGAGCGTCCCACTCCACCTCCAAATGTTGACTATCCATTGGATGGAGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021479.6 |
||