Pregenerated sensors for ACTN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054808Ensembl transcript IDs: ENSMUST00000068045.14, ENSMUST00000127210.8, ENSMUST00000216863.2, ENSMUST00000217157.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCTCCTGGGAGGAGCCACTGGAATCTGGTCCAGGGGAGCTGGGTaGCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LLLGGATGIWSRGAG*PLLDFLGQAVPGQG Trigger: GCCTTGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTGGACCAGATTCCAGTGGCTCCTCCCAGGAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR GCA 90 bp | AGTGGAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTaGCTCCACCTCAGAAGGTCCCCAGAGACCTCTGCCCACCGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SGEKPINDQAGRPAA*LHLRRSPETSAHRH Trigger: GTGGCGGTGGGCAGAGGTCTCTGGGGACCTTCTGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGGGGGCAGAGGGGACCTaGGATAGGAAGGTATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AGADCPAATPEAEKGYGRGAEGT*DRKVSL Trigger: CAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCCC...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCCTCCCCTACAAGACTaGGAAAGAGAGGCCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: AGADCPAATPEAEKGYGRPPLQD*EREACL Trigger: TAGGCAGGCCTCTCTTTCTCAGTCTTGTAGGGGAGG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAAGATGTGAGAGGCTTTaGAGGGGCCTCAGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTRCERL*RGLRGR Trigger: TCTGCCCCTGAGGCCCCTTCAAAGCCTCTCACATCT...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTGATACAGAGTCAGGGTaGGGGCAGGGCTCCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCDTESG*GQGSSA Trigger: GGCTGAGGAGCCCTGCCCCCACCCTGACTCTGTATC...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGGGGCAGAGGGGACCTaGGATAGGAAGGTATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTGAEGT*DRKVSL Trigger: CAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCCC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCACCTGGGAGGAGCCACTaGAATCTGGTCCAGGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: ERNPLTTRQAGQQPASTSPGRSH*NLVQGS Trigger: GCTCCCCTGGACCAGATTCCAGTGGCTCCTCCCAGG...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCACCTCCCCTACAAGACTaGGAAAGAGAGGCCTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: ERNPLTTRQAGQQPASTSPPLQD*EREACL Trigger: TAGGCAGGCCTCTCTTTCTCAGTCTTGTAGGGGAGG...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAACCAGAAATGCTGATTaGCAAGCCTCCCTCCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ERNPLTTRQAGQQPASTSTRNAD*QASLPY Trigger: GTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGGT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCACCAGAAATGCTGATTaGCAAGCCTCCCTCCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: TWDRKVSLGHRSPLSPPITRNAD*QASLPY Trigger: GTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGGT...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR CCA 72 bp | CCTGGGAGGAGCCACTGGAATCTGGTCCAGGGGAGCTaGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: PGRSHWNLVQGS*VPSAGLLRAGG Trigger: ACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTGGACCAGATTCCAGTGGCTCCTCCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR CCA 72 bp | GCAGGTCCTCTGCTCCTGGGAGGAGCCACTGGAATCTaGTCCAGGGGAGCTGGGTGCCCTCTGCTGGACTTC | + |
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Preference number: 3 (lower is better) Translates to: AGPLLLGGATGI*SRGAGCPLLDF Trigger: GAAGTCCAGCAGAGGGCACCCAGCTCCCCTGGACCAGATTCCAGTGGCTCCTCCCAGGAGCAGAGGACCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR GCA 72 bp | GGAGGAGCCACTGGAATCTGGTCCAGGGGAGCTGGGTaGCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GGATGIWSRGAG*PLLDFLGQAVP Trigger: AGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTGGACCAGATTCCAGTGGCTCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR GCA 72 bp | CTGCCTGACCCCCTAGAAGGACCACAAAGAGCTCTTTaGATAGATACAGAGTCAGGGTGGGGGCAGGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPDPLEGPQRAL*IDTESGWGQGS Trigger: GGAGCCCTGCCCCCACCCTGACTCTGTATCTATGCAAAGAGCTCTTTGTGGTCCTTCTAGGGGGTCAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTACCACAAAGAGCTCTTaGCATAGATACAGAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCTTKSS*HRYRVR Trigger: CCTGACTCTGTATCTATGCAAAGAGCTCTTTGTGGT...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCACCACAAAGAGCTCTTaGCATAGATACAGAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGTTKSS*HRYRVR Trigger: CCTGACTCTGTATCTATGCAAAGAGCTCTTTGTGGT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGGTGAAGGTCTTGCGCTaGTGCTTCTCCCAGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRVKVLR*CFSQAG Trigger: CCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCAC...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGCATCTTCCCCCGCTCTaGCTTAGGCAAACGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKHLPPL*LRQTLP Trigger: GGGGAGCGTTTGCCTAAGCCAGAGCGGGGGAAGATG...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCATCTTCCCCCGCTCTaGCTTAGGCAAACGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRHLPPL*LRQTLP Trigger: GGGGAGCGTTTGCCTAAGCCAGAGCGGGGGAAGATG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCCAGCCTTCCGAAGATaGGAGTTGCACCAGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRPAFRR*ELHQAV Trigger: CACAGCCTGGTGCAACTCTCATCTTCGGAAGGCTGG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGCGATGGTGTGGACGATaGACATGTCCTGCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKRWCGR*TCPAGP Trigger: AGGACCTGCAGGACATGTTCATCGTCCACACCATCG...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGTGCTGCCCGACAGCTTaGTGTGATTGCTCTCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKCCPTA*CDCSQR Trigger: TCGCTGAGAGCAATCACATCAAGCTGTCGGGCAGCA...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGTGCCGGTGGATGAGTaGATTGAAGGCCAGCCCGTC | + |
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Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTVPVDE*IEGQPV Trigger: GACGGGCTGGCCTTCAATGCACTCATCCACCGGCAC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGGCGGTCTCAGCCTTCTaGGCTCCTGAAAAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRAVSAF*APEKAW Trigger: CCATGCCTTTTCAGGAGCGCAGAAGGCTGAGACCGC...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGCTCTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKLFGTS*CTFSHL Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAGAG...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCCCACCATATTGGCTTaGCTGGCGAACTGTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRPTILA*LANCRR Trigger: TCGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGAGTAGTCCAGCTCGTTaGGCTCCTGAGCAATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKSSPAR*APEQLQ Trigger: CTGCAATTGCTCAGGAGCTCAACGAGCTGGACTACT...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGGCCCTGAAGTCATCTaGGTCCATGCTGCCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTGPEVI*VHAACL Trigger: CAGACAGGCAGCATGGACTCAGATGACTTCAGGGCC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGTGAAGGTCTTGCGCTaGTGCTTCTCCCAGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSVKVLR*CFSQAG Trigger: CCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCAC...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGGAGCTCCTGAGCAATTaGAGCAATCTGCTCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKELLSN*SNLLHS Trigger: CGAGTGGAGCAGATTGCTGCAATTGCTCAGGAGCTC...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGGCTTGTAGTCCACGATaGTGCGCTCGTACTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKACSPR*CARTAS Trigger: TGAAGCAGTACGAGCGCAGCATCGTGGACTACAAGC...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTTTCCTCAGGCCCCAGTaGCCCGCCATGGTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCFLRPQ*PAMVLV Trigger: GACAAGGACCATGGCGGGGCACTGGGGCCTGAGGAA...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGAGTCATCTGAGTCCATaGTGCCTGTCTGCCGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKSHLSP*CLSAGH Trigger: ATGACCGGCAGACAGGCAGCATGGACTCAGATGACT...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217157.2 |
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| CDS-3UTR CCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACACCCACCATATTGGCTTaGCTGGCGAACTGTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTPTILA*LANCRR Trigger: TCGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGG...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCTCCCTTGCTGGCGATaGAGTCCAGGGCTTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRLPCWR*SPGLCL Trigger: TAAACAAAGCCCTGGACTTCATCGCCAGCAAGGGAG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACACTCTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTLFGTS*CTFSHL Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAGAG...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGGCTTGTAGTCCACGATaGTGCGCTCGTACTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRACSPR*CARTAS Trigger: TGAAGCAGTACGAGCGCAGCATCGTGGACTACAAGC...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGGTCACGAGGCCACTATaGTTGGGATCAACCACACTC | + |
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Preference number: 4 (lower is better) Translates to: AGADCPAATPEAEKGYGRVTRPL*LGSTTL Trigger: GAGTGTGGTTGATCCCAACCATAGTGGCCTCGTGAC...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGGGAAGTTCTGGACGTTaGCGTTTTTATATGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKGSSGR*RFYMGL Trigger: CAGCCCCATATAAAAACGTCAACGTCCAGAACTTCC...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAAGTAGTCCAGCTCGTTaGGCTCCTGAGCAATTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTSSPAR*APEQLQ Trigger: CTGCAATTGCTCAGGAGCTCAACGAGCTGGACTACT...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCCATGTAGTCGCCCATaGTTCCGCCGCCACCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGPCSRP*FRRHPR Trigger: GCGCGGGTGGCGGCGGAAGCATGGGCGACTACATGG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCAGCCAGGGGATGGTaGGCCGAATCCACTCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCPARGW*AESTLE Trigger: TTCTAGAGTGGATTCGGCGCACCATCCCCTGGCTGG...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTATGCTGCGCTCGTACTaGTTCAGGTGGCTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCMLRSY*FRWLSW Trigger: CCAGCTGAGCCACCTGAAGCAGTACGAGCGCAGCAT...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCTTCCTCAGGCCCCAGTaGCCCGCCATGGTCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIFLRPQ*PAMVLV Trigger: GACAAGGACCATGGCGGGGCACTGGGGCCTGAGGAA...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAAACTCAGCATCACCCTaGCGGTCATTCTCCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTNSASP*RSFSTS Trigger: TGACGTGGAGAATGACCGGCAGGGTGATGCTGAGTT...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGTCCACAGAGATGTCCTaGATGGCAAATCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKSTEMS*MANLRM Trigger: CATCCTCAGATTTGCCATCCAGGACATCTCTGTGGA...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCGTTGCTTCAGCATaGCCTCCTTCCCATCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCPVASA*PPSHQS Trigger: GGACTGATGGGAAGGAGGCCATGCTGAAGCAACGGG...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGTGGTCCTTGTCAAAATaGTTGAAGGATGCCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKWSLSK*LKDARN Trigger: GTTCCGGGCATCCTTCAACCATTTTGACAAGGACCA...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACATCCTCCAGCTTCTGCTaGATTTCCTGGATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTSSSFC*ISWMVF Trigger: GAAGACCATCCAGGAAATGCAGCAGAAGCTGGAGGA...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGTACTCCAAATGTAGCTaGTCGATGGTCTCTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLSPSGRPRESLFRVAKYSKCS*SMVSSC Trigger: ACAGCTAGAGACCATCGACCAGCTACATTTGGAGTA...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCACCCAGTGCCCCGCCATaGTCCTTGTCAAAATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSPSAPP*SLSKWL Trigger: CAACCATTTTGACAAGGACCATGGCGGGGCACTGGG...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGAGCTCCTGAGCAATTaGAGCAATCTGCTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSELLSN*SNLLHS Trigger: CGAGTGGAGCAGATTGCTGCAATTGCTCAGGAGCTC...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCATGCTGCGCTCGTACTaGTTCAGGTGGCTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIMLRSY*FRWLSW Trigger: CCAGCTGAGCCACCTGAAGCAGTACGAGCGCAGCAT...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTGCTTGTAGTCCACGATaGTGCGCTCGTACTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCACSPR*CARTAS Trigger: TGAAGCAGTACGAGCGCAGCATCGTGGACTACAAGC...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACATCCACAGAGATGTCCTaGATGGCAAATCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTSTEMS*MANLRM Trigger: CATCCTCAGATTTGCCATCCAGGACATCTCTGTGGA...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTACACATATGTCATTATaGCCTTCTCGTCGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCTHMSL*PSRRAG Trigger: CCCGGCCCGACGAGAAGGCCATAATGACATATGTGT...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGTCACGAGGCCACTATaGTTGGGATCAACCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSVTRPL*LGSTTL Trigger: GAGTGTGGTTGATCCCAACCATAGTGGCCTCGTGAC...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR TCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTTCGATATTCTCGATCTaGGTGCCAGCCTTCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCSIFSI*VPAFRR Trigger: TCTTCGGAAGGCTGGCACTCAGATCGAGAATATCGA...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAACATTGTTGATCTTGTaGACTCGCATCTTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSTLLIL*TRIFPR Trigger: GCGGGGGAAGATGCGAGTGCACAAGATCAACAATGT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGGGTCATCTTTGCATTaGCATCCACAATCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTGSSLH*HPQSLL Trigger: CAGAAGAGATTGTGGATGGCAATGCAAAGATGACCC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCGTGCCGGTGGATGAGTaGATTGAAGGCCAGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGVPVDE*IEGQPV Trigger: GACGGGCTGGCCTTCAATGCACTCATCCACCGGCAC...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCGCCTGCTCCAGGTGCTaGCATCCATTGTTGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIACSRC*HPLLMS Trigger: CGACATCAACAATGGATGGCAGCACCTGGAGCAGGC...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCGCTGCATTTCCTGGATaGTCTTCTGAGGCACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIAAFPG*SSEAPG Trigger: ACCGGGTGCCTCAGAAGACCATCCAGGAAATGCAGC...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCCCCAGTGCCCCGCCATaGTCCTTGTCAAAATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIPSAPP*SLSKWL Trigger: CAACCATTTTGACAAGGACCATGGCGGGGCACTGGG...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCCAGCCTTCCGAAGATaGGAGTTGCACCAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGPAFRR*ELHQAV Trigger: CACAGCCTGGTGCAACTCTCATCTTCGGAAGGCTGG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCAGCTCGTTGAGCTCCTaGGCAATTGCAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPISSLSS*AIAAIC Trigger: GCAGATTGCTGCAATTGCTCAGGAGCTCAACGAGCT...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCGGCCCTGAAGTCATCTaGGTCCATGCTGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGGPEVI*VHAACL Trigger: CAGACAGGCAGCATGGACTCAGATGACTTCAGGGCC...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCGCGGTCTCAGCCTTCTaGGCTCCTGAAAAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGAVSAF*APEKAW Trigger: CCATGCCTTTTCAGGAGCGCAGAAGGCTGAGACCGC...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCATGCTGCGCTCGTACTaGTTCAGGTGGCTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGMLRSY*FRWLSW Trigger: CCAGCTGAGCCACCTGAAGCAGTACGAGCGCAGCAT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCCCGTTGCTTCAGCATaGCCTCCTTCCCATCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGPVASA*PPSHQS Trigger: GGACTGATGGGAAGGAGGCCATGCTGAAGCAACGGG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCCCACCATATTGGCTTaGCTGGCGAACTGTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGPTILA*LANCRR Trigger: TCGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCATGGTCCTTGTCAAAATaGTTGAAGGATGCCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSWSLSK*LKDARN Trigger: GTTCCGGGCATCCTTCAACCATTTTGACAAGGACCA...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCGATGGTGTGGACGATaGACATGTCCTGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGRWCGR*TCPAGP Trigger: AGGACCTGCAGGACATGTTCATCGTCCACACCATCG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCGCCTGCTCCAGGTGCTaGCATCCATTGTTGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGACSRC*HPLLMS Trigger: CGACATCAACAATGGATGGCAGCACCTGGAGCAGGC...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAAATGTAGCTGGTCGATaGTCTCTAGCTGTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERNPLTTRQAGQQPASTSNVAGR*SLAVSL Trigger: CAGAGAAACAGCTAGAGACCATCGACCAGCTACATT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTTACTCCAAATGTAGCTaGTCGATGGTCTCTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCYSKCS*SMVSSC Trigger: ACAGCTAGAGACCATCGACCAGCTACATTTGGAGTA...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCAGCTCGTTGAGCTCCTaGGCAATTGCAGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGSSLSS*AIAAIC Trigger: GCAGATTGCTGCAATTGCTCAGGAGCTCAACGAGCT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTACCATGTAGTCGCCCATaGTTCCGCCGCCACCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLHYESERGGRDMQLPCSRP*FRRHPR Trigger: GCGCGGGTGGCGGCGGAAGCATGGGCGACTACATGG...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCACTCGGTCCTGGTGTaGAGCCAGGTCACTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGHSVLV*SQVTFK Trigger: TTTGAAAGTGACCTGGCTGCACACCAGGACCGAGTG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCATCTGAGTCCATGCTaGCTGTCTGCCGGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGHLSPC*LSAGHS Trigger: AGAATGACCGGCAGACAGGCAGCATGGACTCAGATG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCACACATATGTCATTATaGCCTTCTCGTCGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGTHMSL*PSRRAG Trigger: CCCGGCCCGACGAGAAGGCCATAATGACATATGTGT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTCGATATTCTCGATCTaGGTGCCAGCCTTCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGSIFSI*VPAFRR Trigger: TCTTCGGAAGGCTGGCACTCAGATCGAGAATATCGA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCGGGTCATCTTTGCATTaGCATCCACAATCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIGSSLH*HPQSLL Trigger: CAGAAGAGATTGTGGATGGCAATGCAAAGATGACCC...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCTCCATGCTGCCTGTCTaGTTCTTGTCAAAATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPISMLPV*FLSKWL Trigger: CAACCATTTTGACAAGAAGCAGACAGGCAGCATGGA...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216863.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCAATGTAGCTGGTCGATaGTCTCTAGCTGTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWDRKVSLGHRSPLSPPINVAGR*SLAVSL Trigger: CAGAGAAACAGCTAGAGACCATCGACCAGCTACATT...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCGGAAGTTCTGGACGTTaGCGTTTTTATATGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGGSSGR*RFYMGL Trigger: CAGCCCCATATAAAAACGTCAACGTCCAGAACTTCC...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTGCTTCTTGTCAAAATaGTTGAAGGATGCCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGCFLSK*LKDARN Trigger: GTTCCGGGCATCCTTCAACCATTTTGACAAGAAGCA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216863.2 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTACTCTTTGGCACCAGCTaGTGCACCTTCTCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLHYESERGGRDMQLLFGTS*CTFSHL Trigger: CAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAGAG...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTACACTCGGTCCTGGTGTaGAGCCAGGTCACTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLHYESERGGRDMQLHSVLV*SQVTFK Trigger: TTTGAAAGTGACCTGGCTGCACACCAGGACCGAGTG...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTACTGATATGGAAGTTCTaGACGTTGACGTTTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: NQLCLHYESERGGRDMQLLIWKF*TLTFLY Trigger: ATATAAAAACGTCAACGTCCAGAACTTCCATATCAG...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCCCCACCATATTGGCTaGGCTGGCGAACTGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGADCPAATPEAEKGYGRPHHIG*AGELSA Trigger: CGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGGG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGCGGTGGATGAGTGCATaGAAGGCCAGCCCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGADCPAATPEAEKGYGRRWMSA*KASPSF Trigger: GAAGGACGGGCTGGCCTTCAATGCACTCATCCACCG...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACATTCACAGCCAGCACCTaGCAGATCCGGTTGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTFTAST*QIRLAA Trigger: CGCTGCCAACCGGATCTGCAAGGTGCTGGCTGTGAA...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGTGCTGCCATCCATTGTaGATGTCGGAGACCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKCCHPL*MSETIL Trigger: CAGGATGGTCTCCGACATCAACAATGGATGGCAGCA...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGACGAGGCCACTATGGTaGGGATCAACCACACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKTRPLW*GSTTLM Trigger: CATGAGTGTGGTTGATCCCAACCATAGTGGCCTCGT...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGGAAGTCAATGAAGGCTaGGAAGGTCACGAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKEVNEG*EGHEAT Trigger: AGTGGCCTCGTGACCTTCCAAGCCTTCATTGACTTC...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGACGAGGCCACTATGGTaGGGATCAACCACACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AGADCPAATPEAEKGYGRTRPLW*GSTTLM Trigger: CATGAGTGTGGTTGATCCCAACCATAGTGGCCTCGT...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCCCCCACCATATTGGCTaGGCTGGCGAACTGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIPHHIG*AGELSA Trigger: CGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGGG...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGCACGGATATGCTCCATaGTGTAGTTGGTGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKHGYAP*CSWCAC Trigger: ACAAGCACACCAACTACACAATGGAGCATATCCGTG...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGAAGTCAATGAAGGCTaGGAAGGTCACGAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTEVNEG*EGHEAT Trigger: AGTGGCCTCGTGACCTTCCAAGCCTTCATTGACTTC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGTCATCCTTCCGCAGCTaGTCATACTCAATCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGADCPAATPEAEKGYGRSSFRS*SYSISS Trigger: TGAGCTGATTGAGTATGACAAGCTGCGGAAGGATGA...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCATGTCTCGTAGTCCCGTaGCTTCAGCATGGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERNPLTTRQAGQQPASTSCLVVP*LQHGLL Trigger: AAGGAGGCCATGCTGAAGCAACGGGACTACGAGACA...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| CDS-3UTR CAA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAAAGGGTGCAGCCCGCTaGGCATACTCCAAATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERNPLTTRQAGQQPASTSKGAAR*AYSKCS Trigger: GCTACATTTGGAGTATGCCAAGCGGGCTGCACCCTT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGGCTTTGTTTACATTGTaGATCTTGTGCACTCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKALFTL*ILCTRI Trigger: GATGCGAGTGCACAAGATCAACAATGTAAACAAAGC...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGGCTGATTGCCCCGCAGCCACTCCTGAGGCAGAGAAGGGCTATGGCAGGAGGGTCATCTTTGCATaGCCATCCACAATCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGADCPAATPEAEKGYGRRVIFA*PSTISS Trigger: AGAAGAGATTGTGGATGGCAATGCAAAGATGACCCT...CCTGCCATAGCCCTTCTCTGCCTCAGGAGTGGCTGCGGGGCAATCAGCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAAGGTGCTGCCATCCATaGTTGATGTCGGAGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ERNPLTTRQAGQQPASTSRCCHP*LMSETI Trigger: GATGGTCTCCGACATCAACAATGGATGGCAGCACCT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTAGGTGCTGCCATCCATaGTTGATGTCGGAGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCRCCHP*LMSETI Trigger: GATGGTCTCCGACATCAACAATGGATGGCAGCACCT...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTGAAGTCAATGAAGGCTaGGAAGGTCACGAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCEVNEG*EGHEAT Trigger: AGTGGCCTCGTGACCTTCCAAGCCTTCATTGACTTC...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACATTTACATTGTTGATCTaGTGCACTCGCATCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTFTLLI*CTRIFP Trigger: GGGGAAGATGCGAGTGCACAAGATCAACAATGTAAA...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | GGGCTCCTCAGCCCCTCCGGGAGGCCAAGGGAGTCTCTGTTCAGGGTGGCCAAGATGAAGTCCAGGGCTTaGTTTACATTGTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLSPSGRPRESLFRVAKMKSRA*FTLLIL Trigger: CAAGATCAACAATGTAAACAAAGCCCTGGACTTCAT...CTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCCGGTGGATGAGTGCATaGAAGGCCAGCCCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGRWMSA*KASPSF Trigger: GAAGGACGGGCTGGCCTTCAATGCACTCATCCACCG...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAGCCACTTCAAATGCATaGTTTAGGTTGGTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTATSNA*FRLVTG Trigger: TCCAGTCACCAACCTAAACAATGCATTTGAAGTGGC...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTTCACAGCCAGCACCTaGCAGATCCGGTTGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGFTAST*QIRLAA Trigger: CGCTGCCAACCGGATCTGCAAGGTGCTGGCTGTGAA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCAAGGGTGCAGCCCGCTaGGCATACTCCAAATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIKGAAR*AYSKCS Trigger: GCTACATTTGGAGTATGCCAAGCGGGCTGCACCCTT...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCACGGATATGCTCCATaGTGTAGTTGGTGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCHGYAP*CSWCAC Trigger: ACAAGCACACCAACTACACAATGGAGCATATCCGTG...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCGCCCCGCCATGGTCCTaGTCAAAATGGTTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIAPPWS*SKWLKD Trigger: ATCCTTCAACCATTTTGACAAGGACCATGGCGGGGC...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCATTTACATTGTTGATCTaGTGCACTCGCATCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERNPLTTRQAGQQPASTSFTLLI*CTRIFP Trigger: GGGGAAGATGCGAGTGCACAAGATCAACAATGTAAA...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CAA 90 bp | GAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAAGGGCTTTGTTTACATaGTTGATCTTGTGCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: ERNPLTTRQAGQQPASTSRALFT*LILCTR Trigger: GCGAGTGCACAAGATCAACAATGTAAACAAAGCCCT...TGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAGCTGGGTGCCCTCTGCTGGACTTCTTAGGGCAGGCGGTTCCTGGACAATGAAGTCCAGGGCTTaGTTTACATTGTTGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSWVPSAGLLRAGGSWTMKSRA*FTLLIL Trigger: CAAGATCAACAATGTAAACAAAGCCCTGGACTTCAT...TGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTGTCTCGTAGTCCCGTaGCTTCAGCATGGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGCLVVP*LQHGLL Trigger: AAGGAGGCCATGCTGAAGCAACGGGACTACGAGACA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGGGGACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTGCTTTGTTTACATTGTaGATCTTGTGCACTCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GQRGPGIGRYLWGTGVRCALFTL*ILCTRI Trigger: GATGCGAGTGCACAAGATCAACAATGTAAACAAAGC...ACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCTCATCCTTCCGCAGCTaGTCATACTCAATCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPISSFRS*SYSISS Trigger: TGAGCTGATTGAGTATGACAAGCTGCGGAAGGATGA...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTGCTGCCATCCATTGTaGATGTCGGAGACCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGCCHPL*MSETIL Trigger: CAGGATGGTCTCCGACATCAACAATGGATGGCAGCA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCCACGGATATGCTCCATaGTGTAGTTGGTGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIHGYAP*CSWCAC Trigger: ACAAGCACACCAACTACACAATGGAGCATATCCGTG...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCACGAGGCCACTATGGTaGGGATCAACCACACTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGTRPLW*GSTTLM Trigger: CATGAGTGTGGTTGATCCCAACCATAGTGGCCTCGT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000216863.2 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCGCCACTTCAAATGCATaGTTTAGGTTGGTGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPIATSNA*FRLVTG Trigger: TCCAGTCACCAACCTAAACAATGCATTTGAAGTGGC...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCTTTCGGATCAGAGCTTaGATGTCTGACAGGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGFRIRA*MSDRVA Trigger: AGCCACCCTGTCAGACATCAAAGCTCTGATCCGAAA...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGATAGGAAGGTATCTCTGGGGCACAGGAGTCCGTTGTCCCCTCCAATCCTGCCTGTCTGCTTCTaGTCAAAATGGTTGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TWDRKVSLGHRSPLSPPILPVCF*SKWLKD Trigger: ATCCTTCAACCATTTTGACAAGAAGCAGACAGGCAG...GATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216863.2 |
||
| CDS TCA 90 bp | ACCCAGGCTGTATCCTGTGGAGATAAGCAGGGCCCTGAAGTCATCTaGGTCCATGCTGCCTGTCTGCTTCTTGTCAAAATGGTTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TQAVSCGDKQGPEVI*VHAACLLLVKMVEG Trigger: TCCTTCAACCATTTTGACAAGAAGCAGACAGGCAGCATGGACTCAGATGACTTCAGGGCCCTGCTTATCTCCACAGGATACAGCCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216863.2 |
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| CDS-3UTR CAA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTACCCCACCATATTGGCTaGGCTGGCGAACTGTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: NQLCLHYESERGGRDMQLPHHIG*AGELSA Trigger: CGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGGG...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| CDS-3UTR CAA 90 bp | CCAGAAATGCTGATTGCCAAGCCTCCCTCCCCTACAAGACTGAGAAAGAGAGGCAGGGTCATCTTTGCATaGCCATCCACAATCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PEMLIAKPPSPTRLRKRGRVIFA*PSTISS Trigger: AGAAGAGATTGTGGATGGCAATGCAAAGATGACCCT...GCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068045.14 ENSMUST00000217157.2 |
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| CDS-3UTR CAA 90 bp | AATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGCTATTTCGGATCAGAGCTTaGATGTCTGACAGGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: NQLCLHYESERGGRDMQLFRIRA*MSDRVA Trigger: AGCCACCCTGTCAGACATCAAAGCTCTGATCCGAAA...TAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068045.14 |
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| CDS TCA 72 bp | GTATCCTGTGGAGATAAGCAGGGCCCTGAAGTCATCTaGGTCCATGCTGCCTGTCTGCCGGTCATTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VSCGDKQGPEVI*VHAACLPVILH Trigger: GTGGAGAATGACCGGCAGACAGGCAGCATGGACTCAGATGACTTCAGGGCCCTGCTTATCTCCACAGGATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217157.2 |
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| CDS CCA 72 bp | AGGGGATGGTGCGCCGAATCCACTCTAGAAGATCACTaGCCAGGCGTTCATAGTCTTCCATCAGGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RGWCAESTLEDH*PGVHSLPSGAH Trigger: ATGAGCACCTGATGGAAGACTATGAACGCCTGGCCAGTGATCTTCTAGAGTGGATTCGGCGCACCATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068045.14 ENSMUST00000127210.8 ENSMUST00000217157.2 |
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| CDS TCA 72 bp | GTATCCTGTGGAGATAAGCAGGGCCCTGAAGTCATCTaGGTCCATGCTGCCTGTCTGCTTCTTGTCAAAATG | + |
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Preference number: 6 (lower is better) Translates to: VSCGDKQGPEVI*VHAACLLLVKM Trigger: CATTTTGACAAGAAGCAGACAGGCAGCATGGACTCAGATGACTTCAGGGCCCTGCTTATCTCCACAGGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216863.2 |
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