RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACTN3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006457

Ensembl transcript IDs: ENSMUST00000006626.5

Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTTATTCAGAAGCATGGCACTGGATGACCTGAAGGCCTGGCCCTaGGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTT +
Preference number: 1 (lower is better)
Translates to: SLFRSMALDDLKAWP*GTAESTTGSAPSPF
Trigger: AAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGGCCTTCAGGTCATCCAGTGCCATGCTTCTGAATAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACCGGGCCAGCTCCTCCTaGAGTGTCTGGTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHRASSS*SVWSRL
Trigger: CAGCCGTGACCAGACACTGCAGGAGGAGCTGGCCCG...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCAGCCTCTCGTTCACCTaGTGCCGGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFSLSFT*CRASSS
Trigger: GGAGGAGCTGGCCCGGCAGCAGGTGAACGAGAGGCT...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCGCAGACCTGCCATCTaGTCCTCCAGAGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFRRPAI*SSREPA
Trigger: GGCCGGCTCTCTGGAGGAGCAGATGGCAGGTCTGCG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTCCTGCAGCAGCTGGTaGTCACCCTCCAGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHSCSSW*SPSSRS
Trigger: CGACCGGCTGGAGGGTGACCACCAGCTGCTGCAGGA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCTCTCCTGCAGCAGCTaGTGGTCACCCTCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFLSCSS*WSPSSR
Trigger: CCGGCTGGAGGGTGACCACCAGCTGCTGCAGGAGAG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACCTCAGCCTGCTCGGCTaGGAGCTCTCTCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHLSLLG*ELSPQL
Trigger: GAGCTGCGGAGAGAGCTCCCAGCCGAGCAGGCTGAG...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGGTAGTCGAGCTCATTaGGTTCCTGGGCCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFGSRAH*VPGPGP
Trigger: CGGCCCTGGCCCAGGAACTCAATGAGCTCGACTACC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCATCCAGCCAGTTATTaGAGGGGGCTGCCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFHPASY*RGLPAE
Trigger: CTCGGCGGGCAGCCCCCTTCAATAACTGGCTGGATG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACAGGCGCGGAATTCGTTaGGCTGCTCCTGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHRRGIR*AAPGSG
Trigger: GCCTGAGCCAGGAGCAGCTCAACGAATTCCGCGCCT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCCGGCCAGCCCAGCTaGCAGCCGTCCTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAGQPS*QPSYFL
Trigger: GAGGAAGTAGGACGGCTGGCAGCTGGGCTGGCCGGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTTCTCAGCCAGGTGCTaGAGCCTCTGCAGACGCCTG +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHFSARC*SLCRRL
Trigger: CAGGCGTCTGCAGAGGCTTCAGCACCTGGCTGAGAA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACCTGCTGCCGCAGACCTaGCATCTGCTCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHLLPQT*HLLLQR
Trigger: TCTCTGGAGGAGCAGATGGCAGGTCTGCGGCAGCAG...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCCAGCTTGCGCTGCATaGCACTCATGCTGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFPACAA*HSCWVR
Trigger: GCGAACCCAGCATGAGTGCCATGCAGCGCAAGCTGG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCTTGGATGCCCAGGATaGCGCCTCGCTCTCGATCAG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFLGCPG*RLALDQ
Trigger: CTGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTCCTCCTGCAGTGTCTaGTCACGGCTGGGTACCAGC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHSSCSV*SRLGTS
Trigger: GCTGGTACCCAGCCGTGACCAGACACTGCAGGAGGA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCCTGGCTCAGGCCCTTaGCATCTCGGGTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFPGSGP*HLGSVP
Trigger: AGGTACTGACCCGAGATGCCAAGGGCCTGAGCCAGG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCTGCATGGCACTCATaGTGGGTTCGCCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAAWHS*WVRPRG
Trigger: ACCGCGTGGGCGAACCCAGCATGAGTGCCATGCAGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTCCTCCAGCTTGCGCTaGATGGCACTCATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHSSSLR*MALMLG
Trigger: ACCCAGCATGAGTGCCATGCAGCGCAAGCTGGAGGA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGTCTCCTCCACAGAGTaGACGAGCCACACATCCTGC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHVSSTE*TSHTSC
Trigger: GCAGGATGTGTGGCTCGTGCACTCTGTGGAGGAGAC...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACAAGACTAGGCTCTCCTaGAGCAGCTGGTGGTCACCC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHKTRLS*SSWWSP
Trigger: GGGTGACCACCAGCTGCTGCAGGAGAGCCTAGTCTT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCGCCATCCGACGGATaGAGTACTCAGCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAPSDG*STQPAR
Trigger: CCGAGCAGGCTGAGTACTGCATCCGTCGGATGGCGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACATGAAAGCGGGTCGGTaGCTCAGGCGCAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHMKAGR*LRRNLV
Trigger: GACCAAGTTGCGCCTGAGCCACCGACCCGCTTTCAT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTGGTCACAGATGGCTTaGCAGCGGCTGTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHWSQMA*QRLFTE
Trigger: CTCCGTGAACAGCCGCTGCCAAGCCATCTGTGACCA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGCTGTTAGCAGGCTCTaGGTCTCCTCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFAVSRL*VSSTEC
Trigger: GCACTCTGTGGAGGAGACCCAGAGCCTGCTAACAGC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCCTATGGCATTAGCCTaGGCTGCAAACTGTCGCCGG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFPMALA*AANCRR
Trigger: CCGGCGACAGTTTGCAGCCCAGGCTAATGCCATAGG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCAGCAGTCTCTGCCTaGTCAGCCCCAGCAAACGCA +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAAVSA*SAPANA
Trigger: TGCGTTTGCTGGGGCTGAGCAGGCAGAGACTGCTGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGGCATTAGCCTGGGCTaGAAACTGTCGCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMGISLG*KLSPEP
Trigger: AGGCTCCGGCGACAGTTTGCAGCCCAGGCTAATGCC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCATGGCACTCATGCTaGGTTCGCCCACGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAWHSC*VRPRGS
Trigger: AGAACCGCGTGGGCGAACCCAGCATGAGTGCCATGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGTCCAGAGCTCCAGATaGAGCCCCAGATCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFVQSSR*SPRSLV
Trigger: TACAAGGGATCTGGGGCTCCATCTGGAGCTCTGGAC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACAGTTGCACCAGGCAGTaGAGGTTTTCCGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHSCTRQ*RFSAAV
Trigger: AACAGCAGCGGAAAACCTTCACTGCCTGGTGCAACT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGTGAAGGTTTTCCGCTaGTGTTTCTCCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMVKVFR*CFSQAG
Trigger: CCCGGCCTGGGAGAAACAGCAGCGGAAAACCTTCAC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGACATTGCGGTACGGTaGTGTTTTCCGCTGACACCA +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFDIAVR*CFPLTP
Trigger: TGGTGTCAGCGGAAAACAGCACCGTACCGCAATGTC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGTTGGCAGCAGTCTCTaGCTGCTCAGCCCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMVGSSL*LLSPSK
Trigger: TTTGCTGGGGCTGAGCAGGCAGAGACTGCTGCCAAC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGTTATTGAAGGGGGCTaGCCGCCGAGCAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMVIEGG*PPSKLQ
Trigger: CTGGAGTTTGCTCGGCGGGCAGCCCCCTTCAATAAC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGCGGAATTCGTTGAGCTaGTCCTGGCTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMRNSLS*SWLRPL
Trigger: CAAGGGCCTGAGCCAGGAGCAGCTCAACGAATTCCG...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGGTCACAACCCCAGCTaGATTGGGGTCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMGHNPS*IGVHHG
Trigger: ACCATGGTGGACCCCAATGCAGCTGGGGTTGTGACC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCCCAAGTTATCCCACTaGTCACAGATGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFPKLSH*SQMAWQ
Trigger: CTGCCAAGCCATCTGTGACCAGTGGGATAACTTGGG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTGCCTTGCGCAGATGTaGGTTGCACCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMCLAQM*VAPGSE
Trigger: TTCACTGCCTGGTGCAACTCACATCTGCGCAAGGCA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGGTGCTGTTTTCCGCTaGCACCAGAGAAGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMGAVFR*HQRSKP
Trigger: AGGCTTGCTTCTCTGGTGTCAGCGGAAAACAGCACC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGTCCACCATGGTCATaGTTCGAGCAAACTCCACTT +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHGPPWS*FEQTPL
Trigger: AAGTGGAGTTTGCTCGAATCATGACCATGGTGGACC...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCTCACAGCTAAGACCTTaGAGATCCTGTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFSQLRP*RSCWQQ
Trigger: CTGCTGCCAACAGGATCTGCAAGGTCTTAGCTGTGA...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGAGCCTCGGGCAACGTTaGCTTGAACTGTTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMSLGQR*LELFVC
Trigger: GCACACGAACAGTTCAAGGCAACGTTGCCCGAGGCT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGATGTTCTGTTCCTGCTaGCGCAGACCTGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMMFCSC*RRPAIC
Trigger: GCAGATGGCAGGTCTGCGGCAGCAGGAACAGAACAT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTTCTGGATCTCTCCTTaGATGCCCAGGATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMFWISP*MPRMAP
Trigger: AGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGGAAGTTCTGTACGTTaGCATTGCGGTACGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMGSSVR*HCGTVL
Trigger: CAGCACCGTACCGCAATGTCAACGTACAGAACTTCC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGCGTAACCCATGGAGATaGGACAAGCTCGGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMRNPWR*DKLGSR
Trigger: ACGACTTCCGAGCTTGTCTCATCTCCATGGGTTACG...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGATGATGTTCTGTTCCTaGTGCCGCAGACCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMMMFCS*CRRPAI
Trigger: GATGGCAGGTCTGCGGCAGCAGGAACAGAACATCAT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACCACGAATGTGCTCCATaGTGTAGACTGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHHECAP*CRLCAC
Trigger: ACAAGCACACAGTCTACAGCATGGAGCACATTCGTG...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGTAGTTCTTGTCTCCTaGCAGGATTTTGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFVVLVS*QDFEGG
Trigger: GCCTCCTTCAAAATCCTGGCAGGAGACAAGAACTAC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCGTCCCTCCTCTTCTaGGTCAGTGTACCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMASLLF*VSVPKL
Trigger: TAACTTGGGTACACTGACCCAGAAGAGGAGGGACGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACCAATTGGGTCATCCTTaGGAAGCTTGGCATAGTCAA +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHQLGHP*EAWHSQ
Trigger: TTGACTATGCCAAGCTTCGCAAGGATGACCCAATTG...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACACATTGGCGATTTTGTaGAAGCGCATCTTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHTLAIL*KRILPL
Trigger: CAAAGGCAAGATGCGCTTCCACAAAATCGCCAATGT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGCAAGCCTTCTTTGGCTaGGGTCTCTTCTACAGAGAT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMQAFFG*GLFYRD
Trigger: ATCTCTGTAGAAGAGACCTCAGCCAAAGAAGGCTTG...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGACTCCAACAGCTCACTaGCCAGTTTCTCATACTCCT +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMTPTAH*PVSHTP
Trigger: AGGAGTATGAGAAACTGGCCAGTGAGCTGTTGGAGT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGTTTGGCAAATCTTCTaGATCTCTCCTTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMVWQIF*ISPWMP
Trigger: GGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAAC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR GCA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGTTCACGATATCTTCTaGATCCAGCATCTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHVHDIF*IQHLRN
Trigger: ATTCCTAAGATGCTGGATGCAGAAGATATCGTGAAC...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR TCA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGAGTCTAGGGCTTTATTaGCATTGGCGATTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMSLGLY*HWRFCG
Trigger: TCCACAAAATCGCCAATGTCAATAAAGCCCTAGACT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 90 bp CCGCAGACCTGCCATCTGCTCCTCCAGAGAGCCGGCCAGCCCAGCTaGCAGCCGTCCTACTTCCTCCACTTTTCCCTGGATCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PQTCHLLLQRAGQPS*QPSYFLHFSLDPGS
Trigger: GGACCCTGGATCCAGGGAAAAGTGGAGGAAGTAGGACGGCTGGCAGCTGGGCTGGCCGGCTCTCTGGAGGAGCAGATGGCAGGTCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCTGGTCACAGATGGCTaGGCAGCGGCTGTTCACGGA +
Preference number: 5 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFLVTDG*AAAVHG
Trigger: TCCGTGAACAGCCGCTGCCAAGCCATCTGTGACCAG...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 90 bp GTTGCTCTTGTAATTGATGATGTTCTGTTCCTGCTGCCGCAGACCTaGCATCTGCTCCTCCAGAGAGCCGGCCAGCCCAGCTGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: VALVIDDVLFLLPQT*HLLLQRAGQPSCQP
Trigger: CGGCTGGCAGCTGGGCTGGCCGGCTCTCTGGAGGAGCAGATGGCAGGTCTGCGGCAGCAGGAACAGAACATCATCAATTACAAGAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCACCTTGCAGATCCTGTaGGCAGCAGTCTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFTLQIL*AAVSAC
Trigger: GCAGGCAGAGACTGCTGCCAACAGGATCTGCAAGGT...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGCCATCCAGCCAGTTATaGAAGGGGGCTGCCCGCCGA +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMPSSQL*KGAARR
Trigger: TCGGCGGGCAGCCCCCTTCAATAACTGGCTGGATGG...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTCCTGGCTCAGGCCCTaGGCATCTCGGGTCAGTACC +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMSWLRP*ASRVST
Trigger: GGTACTGACCCGAGATGCCAAGGGCCTGAGCCAGGA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGAGGCGCGGAATTCGTaGAGCTGCTCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMEARNS*SCSWLR
Trigger: CCTGAGCCAGGAGCAGCTCAACGAATTCCGCGCCTC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACACAACCCCAGCTGCATaGGGGTCCACCATGGTCATG +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHTTPAA*GSTMVM
Trigger: CATGACCATGGTGGACCCCAATGCAGCTGGGGTTGT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGAAGCGCATCTTGCCTTaGTCGGGCCTAGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMKRILP*SGLGSL
Trigger: GAGGCTGCCTAGGCCCGACAAAGGCAAGATGCGCTT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGCTTCTGGATCTCTCCTaGGATGCCCAGGATGGCGCC +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMLLDLS*DAQDGA
Trigger: GGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAG...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGAAGGAGGCTACCACTaGTTCAGCCGTGTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHEGGYH*FSRVCL
Trigger: GAGACAGACACGGCTGAACAAGTGGTAGCCTCCTTC...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTTGTGGAAGCGCATCTaGCCTTTGTCGGGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMLWKRI*PLSGLG
Trigger: GCCTAGGCCCGACAAAGGCAAGATGCGCTTCCACAA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 90 bp TTTGGCCGTAGTCCGTATGTTTGGCAAATCTTCTGGATCTCTCCTTaGATGCCCAGGATGGCGCCTCGCTCTCGATCAGCCTCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FGRSPYVWQIFWISP*MPRMAPRSRSASGN
Trigger: GTTGCCCGAGGCTGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAACATACGGACTACGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 90 bp GGGTTGCCGGACTTTGGCCGTAGTCCGTATGTTTGGCAAATCTTCTaGATCTCTCCTTGGATGCCCAGGATGGCGCCTCGCTCTCGATCA +
Preference number: 5 (lower is better)
Translates to: GLPDFGRSPYVWQIF*ISPWMPRMAPRSRS
Trigger: TGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAACATACGGACTACGGCCAAAGTCCGGCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTTCACAGCTAAGACCTaGCAGATCCTGTTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHFTAKT*QILLAA
Trigger: TGCTGCCAACAGGATCTGCAAGGTCTTAGCTGTGAA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTTGACATTGGCGATTTaGTGGAAGCGCATCTTGCCT +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHLTLAI*WKRILP
Trigger: AGGCAAGATGCGCTTCCACAAAATCGCCAATGTCAA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACAGAAGCAAGCCTTCTTaGGCTGAGGTCTCTTCTACA +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHRSKPS*AEVSST
Trigger: TGTAGAAGAGACCTCAGCCAAAGAAGGCTTGCTTCT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACTTTAACATTTCCTCTTaGCCCCGGGTCCAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHFNISS*PRVQAS
Trigger: TGAAGCTTGGACCCGGGGCAAAGAGGAAATGTTAAA...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCGTATCCCACTTATTGTaGATGTCCTGCGAACTGAGG +
Preference number: 5 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFVSHLL*MSCELR
Trigger: CCTCAGTTCGCAGGACATCAACAATAAGTGGGATAC...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 90 bp GCAGCGAGGCTGACTCGTAGTCGTGCTGGTTTAACATTTCCTCTTTaGCCCGGGTCCAAGCTTCATGCAGGGAAGCCTTCTGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: AARLTRSRAGLTFPL*PGSKLHAGKPSVGT
Trigger: AGTTCCAACAGAAGGCTTCCCTGCATGAAGCTTGGACCCGGGGCAAAGAGGAAATGTTAAACCAGCACGACTACGAGTCAGCCTCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTGGAAGTTCTGTACGTaGACATTGCGGTACGGTGCT +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMWKFCT*TLRYGA
Trigger: AGCACCGTACCGCAATGTCAACGTACAGAACTTCCA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACACTGTATCCCACTTATaGTTGATGTCCTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: GPEGQLNPPQEVPPLLFHTVSHL*LMSCEL
Trigger: CAGTTCGCAGGACATCAACAATAAGTGGGATACAGT...GTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp CCTGGCCCTGAGGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCAAGTCTAGGGCTTTATaGACATTGGCGATTTTGTGG +
Preference number: 5 (lower is better)
Translates to: PGPEGQLNPPQEVPPLLFKSRAL*TLAILW
Trigger: CCACAAAATCGCCAATGTCAATAAAGCCCTAGACTT...GAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCCTCAGGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGTTCTGTACGTTGACATaGCGGTACGGTGCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMFCTLT*RYGAVF
Trigger: GAAAACAGCACCGTACCGCAATGTCAACGTACAGAA...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGGCTTTCTCATCTGGTTaGGGGGTGTTCACGATATCT +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMAFSSG*GVFTIS
Trigger: AGATATCGTGAACACCCCCAAACCAGATGAGAAAGC...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS-3UTR CAA 90 bp GGGACAGCTGAATCCACCACAGGAAGTGCCCCCTCTCCTTTTCCACGGAGAATGACTAGCTTAACTCCTTaGCTGGCAATGAAGTCTAGG +
Preference number: 5 (lower is better)
Translates to: GTAESTTGSAPSPFPRRMTSLTP*LAMKSR
Trigger: CCTAGACTTCATTGCCAGCAAAGGAGTTAAGCTAGT...CATTCTCCGTGGAAAAGGAGAGGGGGCACTTCCTGTGGTGGATTCAGCTGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CAA 72 bp GCGCCTCGCTCTCGATCAGCCTCGGGCAACGTTGCCTaGAACTGTTCGTGTGCTGTTAGCAGGCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: APRSRSASGNVA*NCSCAVSRLWV
Trigger: GACCCAGAGCCTGCTAACAGCACACGAACAGTTCAAGGCAACGTTGCCCGAGGCTGATCGAGAGCGAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS TCA 72 bp CGCCTCGCTCTCGATCAGCCTCGGGCAACGTTGCCTTaGACTGTTCGTGTGCTGTTAGCAGGCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: RLALDQPRATLP*TVRVLLAGSGS
Trigger: AGACCCAGAGCCTGCTAACAGCACACGAACAGTTCAAGGCAACGTTGCCCGAGGCTGATCGAGAGCGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 72 bp GTCACAGATGGCTTGGCAGCGGCTGTTCACGGAGGCTaGCTCATGGTAGTCGAGCTCATTGAGTTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: VTDGLAAAVHGG*LMVVELIEFLG
Trigger: GCCCAGGAACTCAATGAGCTCGACTACCATGAGGCAGCCTCCGTGAACAGCCGCTGCCAAGCCATCTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp GGCAAATCTTCTGGATCTCTCCTTGGATGCCCAGGATaGCGCCTCGCTCTCGATCAGCCTCGGGCAACGTTG +
Preference number: 6 (lower is better)
Translates to: GKSSGSLLGCPG*RLALDQPRATL
Trigger: CAACGTTGCCCGAGGCTGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 72 bp TGGGTCTCCTCCACAGAGTGCACGAGCCACACATCCTaGAGGTCCTCAATAGCCCCATCCAGCCAGTTATTG +
Preference number: 6 (lower is better)
Translates to: WVSSTECTSHTS*RSSIAPSSQLL
Trigger: CAATAACTGGCTGGATGGGGCTATTGAGGACCTGCAGGATGTGTGGCTCGTGCACTCTGTGGAGGAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 72 bp CGTATGTTTGGCAAATCTTCTGGATCTCTCCTTGGATaGCCAGGATGGCGCCTCGCTCTCGATCAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RMFGKSSGSLLG*PGWRLALDQPR
Trigger: CCGAGGCTGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAACATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp CTCCTCTTCTGGGTCAGTGTACCCAAGTTATCCCACTaGTCACAGATGGCTTGGCAGCGGCTGTTCACGGAG +
Preference number: 6 (lower is better)
Translates to: LLFWVSVPKLSH*SQMAWQRLFTE
Trigger: CTCCGTGAACAGCCGCTGCCAAGCCATCTGTGACCAGTGGGATAACTTGGGTACACTGACCCAGAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp AGTCCGTATGTTTGGCAAATCTTCTGGATCTCTCCTTaGATGCCCAGGATGGCGCCTCGCTCTCGATCAGCC +
Preference number: 6 (lower is better)
Translates to: SPYVWQIFWISP*MPRMAPRSRSA
Trigger: GGCTGATCGAGAGCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAACATACGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp GACTTTGGCCGTAGTCCGTATGTTTGGCAAATCTTCTaGATCTCTCCTTGGATGCCCAGGATGGCGCCTCGC +
Preference number: 6 (lower is better)
Translates to: DFGRSPYVWQIF*ISPWMPRMAPR
Trigger: GCGAGGCGCCATCCTGGGCATCCAAGGAGAGATCCAGAAGATTTGCCAAACATACGGACTACGGCCAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 72 bp CTGACTCGTAGTCGTGCTGGTTTAACATTTCCTCTTTaGCCCGGGTCCAAGCTTCATGCAGGGAAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LTRSRAGLTFPL*PGSKLHAGKPS
Trigger: AGAAGGCTTCCCTGCATGAAGCTTGGACCCGGGGCAAAGAGGAAATGTTAAACCAGCACGACTACGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS GCA 72 bp TCAGCTTCTCATTTTCCTGGTTCACAGCTAAGACCTTaGAGATCCTGTTGGCAGCAGTCTCTGCCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SASHFPGSQLRP*RSCWQQSLPAQ
Trigger: CTGAGCAGGCAGAGACTGCTGCCAACAGGATCTGCAAGGTCTTAGCTGTGAACCAGGAAAATGAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp CTCTGCCACCTCGAAGGCAGTGTTCAGGTTTCCAATTaGGTCATCCTTGCGAAGCTTGGCATAGTCAATGAG +
Preference number: 6 (lower is better)
Translates to: LCHLEGSVQVSN*VILAKLGIVNE
Trigger: CTCATTGACTATGCCAAGCTTCGCAAGGATGACCCAATTGGAAACCTGAACACTGCCTTCGAGGTGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CCA 72 bp ATGAAGTCTAGGGCTTTATTGACATTGGCGATTTTGTaGAAGCGCATCTTGCCTTTGTCGGGCCTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: MKSRALLTLAIL*KRILPLSGLGS
Trigger: GCTGCCTAGGCCCGACAAAGGCAAGATGCGCTTCCACAAAATCGCCAATGTCAATAAAGCCCTAGACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CAA 72 bp GCAATGAAGTCTAGGGCTTTATTGACATTGGCGATTTaGTGGAAGCGCATCTTGCCTTTGTCGGGCCTAGGC +
Preference number: 6 (lower is better)
Translates to: AMKSRALLTLAI*WKRILPLSGLG
Trigger: GCCTAGGCCCGACAAAGGCAAGATGCGCTTCCACAAAATCGCCAATGTCAATAAAGCCCTAGACTTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5
CDS CAA 72 bp ATCAGCTTCTCATTTTCCTGGTTCACAGCTAAGACCTaGCAGATCCTGTTGGCAGCAGTCTCTGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: ISFSFSWFTAKT*QILLAAVSACS
Trigger: TGAGCAGGCAGAGACTGCTGCCAACAGGATCTGCAAGGTCTTAGCTGTGAACCAGGAAAATGAGAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006626.5