Pregenerated sensors for ACTN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052374Ensembl transcript IDs: ENSMUST00000064204.14, ENSMUST00000168193.8, ENSMUST00000221162.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATCCGGAAGGAGGCGATaGCCTGCTCTGCCGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASGRRR*PALPCR Trigger: CCGACACGGCAGAGCAGGTCATCGCCTCCTTCCGGA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATCCGGAAGGAGGCGATaGCCTGCTCTGCCGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSGRRR*PALPCR Trigger: CCGACACGGCAGAGCAGGTCATCGCCTCCTTCCGGA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCCGGTGTCTGTGGATaGGGGCACAGAGTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAAGVCG*GHRVQG Trigger: GCCTTGGACTCTGTGCCCTCATCCACAGACACCGGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCCGGTGTCTGTGGATaGGGGCACAGAGTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERAGVCG*GHRVQG Trigger: GCCTTGGACTCTGTGCCCTCATCCACAGACACCGGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGGCGATGACCTGCTCTaGCGTGTCGGTGTCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERGDDLL*RVGVCG Trigger: ACCGCAGACACCGACACGGCAGAGCAGGTCATCGCC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAAGGGCCCCGGTGATCTaGATGGAGCTCCGAGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERARAPVI*MELRAI Trigger: GATCGCTCGGAGCTCCATCCAGATCACCGGGGCCCT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAGGGCCCCGGTGATCTaGATGGAGCTCCGAGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERRAPVI*MELRAI Trigger: GATCGCTCGGAGCTCCATCCAGATCACCGGGGCCCT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGACCCTCCTCTTCTGGGTaGGCGTCCCCAATCTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERPSSSG*ASPIYP Trigger: GGGATAGATTGGGGACGCTCACCCAGAAGAGGAGGG...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACCCTCCTCTTCTGGGTaGGCGTCCCCAATCTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAPSSSG*ASPIYP Trigger: GGGATAGATTGGGGACGCTCACCCAGAAGAGGAGGG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAATGCAGTACTGGGCCTaGTCCGGAGGCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERMQYWA*SGGSSR Trigger: TCGAGAGCTGCCTCCGGATCAGGCCCAGTACTGCAT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAATGCAGTACTGGGCCTaGTCCGGAGGCAGCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAMQYWA*SGGSSR Trigger: TCGAGAGCTGCCTCCGGATCAGGCCCAGTACTGCAT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGTGAACGTCTTCCTCTaGTGCTTCTCCCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAVNVFL*CFSQAG Trigger: CCCGGCCTGGGAGAAGCAGCAGAGGAAGACGTTCAC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGTGAACGTCTTCCTCTaGTGCTTCTCCCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERVNVFL*CFSQAG Trigger: CCCGGCCTGGGAGAAGCAGCAGAGGAAGACGTTCAC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACCACCTCGTTCTGGATaGCCAGGATGGACTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAPPRSG*PGWTAA Trigger: AGCGGCAGTCCATCCTGGCCATCCAGAACGAGGTGG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCAGCTCATCCATGGTaGCAGTGCTGTAGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAAAHPW*QCCRGC Trigger: GCAACCCCTACAGCACTGTCACCATGGATGAGCTGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCTCATCCATGGTaGCAGTGCTGTAGGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERAAHPW*QCCRGC Trigger: GCAACCCCTACAGCACTGTCACCATGGATGAGCTGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTCCCCGGTCAGGTTTaGGCAGCCTTTCCCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAFPGQV*AAFPLR Trigger: TCTCAGGGGAAAGGCTGCCCAAACCTGACCGGGGAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCCTCCCTCCTCTTCTaGGTGAGCGTCCCCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERASLLF*VSVPNL Trigger: TAGATTGGGGACGCTCACCCAGAAGAGGAGGGAGGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCCTCCCTCCTCTTCTaGGTGAGCGTCCCCAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAASLLF*VSVPNL Trigger: TAGATTGGGGACGCTCACCCAGAAGAGGAGGGAGGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGACGCTCATTAGCATGTTaGCGAGCCAGCTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERRSLAC*RASSSC Trigger: GCAGGAGGAGCTGGCTCGCCAACATGCTAATGAGCG...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACGCTCATTAGCATGTTaGCGAGCCAGCTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERARSLAC*RASSSC Trigger: GCAGGAGGAGCTGGCTCGCCAACATGCTAATGAGCG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAGTTGCACCAGGCAGTaGACGTCTTCCTCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSCTRQ*TSSSAA Trigger: AGCAGCAGAGGAAGACGTTCACTGCCTGGTGCAACT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAAGTTGCACCAGGCAGTaGACGTCTTCCTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASCTRQ*TSSSAA Trigger: AGCAGCAGAGGAAGACGTTCACTGCCTGGTGCAACT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATCCACTGAGATGTCCTaGATGGCGAAGCGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASTEMS*MAKRRM Trigger: CATCCTCCGCTTCGCCATTCAGGACATCTCAGTGGA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATCCACTGAGATGTCCTaGATGGCGAAGCGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSTEMS*MAKRRM Trigger: CATCCTCCGCTTCGCCATTCAGGACATCTCAGTGGA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATTCTCCACCTCGTTCTaGATGGCCAGGATGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERFSTSF*MARMDC Trigger: GCAGTCCATCCTGGCCATCCAGAACGAGGTGGAGAA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGATAGTCCAGTTCATTaGGCTCCTGCGCAATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERDSPVH*APAQWQ Trigger: CTGCCATTGCGCAGGAGCTCAATGAACTGGACTATC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAATGGGGGCATTCTCTTaGTGCAGTACTGGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAMGAFS*CSTGPD Trigger: ATCAGGCCCAGTACTGCATCAAGAGAATGCCCCCAT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAATGGGGGCATTCTCTTaGTGCAGTACTGGGCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERMGAFS*CSTGPD Trigger: ATCAGGCCCAGTACTGCATCAAGAGAATGCCCCCAT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAACATATTCTGTTAGCTaGTGTCTCGGCCTGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERATYSVS*CLGLLR Trigger: GCGGAGCAGGCCGAGACAGCAGCTAACAGAATATGT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAACATATTCTGTTAGCTaGTGTCTCGGCCTGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERTYSVS*CLGLLR Trigger: GCGGAGCAGGCCGAGACAGCAGCTAACAGAATATGT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTCTTCTGCATGGCCTaGATGGTCTTCTCAGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAFFCMA*MVFSGV Trigger: GACGCCTGAGAAGACCATGCAGGCCATGCAGAAGAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATGCCGTGTCGGTGTCTaGGGTCTCTCTAGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERCRVGV*GLSSHE Trigger: TTCATGACTAGAGAGACCGCAGACACCGACACGGCA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATGCCGTGTCGGTGTCTaGGGTCTCTCTAGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERACRVGV*GLSSHE Trigger: TTCATGACTAGAGAGACCGCAGACACCGACACGGCA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACCAGCTTCTTCTGCATaGCCTGCATGGTCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAPASSA*PAWSSQ Trigger: CTGAGAAGACCATGCAGGCCATGCAGAAGAAGCTGG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGACCAGCTTCTTCTGCATaGCCTGCATGGTCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERPASSA*PAWSSQ Trigger: CTGAGAAGACCATGCAGGCCATGCAGAAGAAGCTGG...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCAGTGATCAGACTCTaGATCTCCTCGATGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAAVIRL*ISSMLW Trigger: CCACAGCATCGAGGAGATCCAGAGTCTGATCACTGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATCTGGCACCGATCATTaGCGTTCACAGCATCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSGTDH*RSQHRD Trigger: ATCACGATGCTGTGAACGTCAATGATCGGTGCCAGA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCTCTGAAATCCTCATaGTCCATCAGGCCGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERALKSS*SIRPFF Trigger: GAAGAACGGCCTGATGGATCATGAGGATTTCAGAGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCTCTGAAATCCTCATaGTCCATCAGGCCGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAALKSS*SIRPFF Trigger: GAAGAACGGCCTGATGGATCATGAGGATTTCAGAGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACCAGCTTCACTCCCTTaGTGGCTATGTAATCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAPASLP*WLCNPE Trigger: CTCTGGATTACATAGCCAGCAAGGGAGTGAAGCTGG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAACTTCTCAGCCAAGTaGTCCAAGCGCTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERNFSAK*SKRSSL Trigger: AAGACTGGAGCGCTTGGAGCACTTGGCTGAGAAGTT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAAACTTCTCAGCCAAGTaGTCCAAGCGCTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERANFSAK*SKRSSL Trigger: AAGACTGGAGCGCTTGGAGCACTTGGCTGAGAAGTT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCTTCACTCCCTTGCTaGCTATGTAATCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAASLPC*LCNPEP Trigger: AGGCTCTGGATTACATAGCCAGCAAGGGAGTGAAGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCTTCACTCCCTTGCTaGCTATGTAATCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERASLPC*LCNPEP Trigger: AGGCTCTGGATTACATAGCCAGCAAGGGAGTGAAGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATTGGCAAACTCCAGGTaGAGTTGGTCGATTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERLANSR*SWSIVS Trigger: GGAAACAATCGACCAACTGCACCTGGAGTTTGCCAA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTGGCAAACTCCAGGTaGAGTTGGTCGATTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERALANSR*SWSIVS Trigger: GGAAACAATCGACCAACTGCACCTGGAGTTTGCCAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATCGACGAAGCTCCTCTaGCAAGATGTAAGGCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASTKLL*QDVRLI Trigger: GATAAGCCTTACATCTTGGCAGAGGAGCTTCGTCGA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATCCCACTCCTCCTCCTaGATCATATACTCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSHSSS*IIYSSS Trigger: CGAAGATGAGTATATGATCCAGGAGGAGGAGTGGGA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATCCCACTCCTCCTCCTaGATCATATACTCATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASHSSS*IIYSSS Trigger: CGAAGATGAGTATATGATCCAGGAGGAGGAGTGGGA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAACATTCGCAATCTTGTaGAACCGCATTTTTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERTFAIL*NRIFPR Trigger: CCGGGGAAAAATGCGGTTCCACAAGATTGCGAATGT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAACATTCGCAATCTTGTaGAACCGCATTTTTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERATFAIL*NRIFPR Trigger: CCGGGGAAAAATGCGGTTCCACAAGATTGCGAATGT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGGCCATCTTTCCAGCTaGTGTGGAAGTTCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERGHLSS*CGSSGY Trigger: ATATCCAGAACTTCCACACCAGCTGGAAAGATGGCC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGGCCATCTTTCCAGCTaGTGTGGAAGTTCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAGHLSS*CGSSGY Trigger: ATATCCAGAACTTCCACACCAGCTGGAAAGATGGCC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACCCAATCTATCCCACTaGTCGCAAATTTTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAPNLSH*SQIFWH Trigger: GTGCCAGAAAATTTGCGACCAGTGGGATAGATTGGG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGACCCAATCTATCCCACTaGTCGCAAATTTTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERPNLSH*SQIFWH Trigger: GTGCCAGAAAATTTGCGACCAGTGGGATAGATTGGG...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGACACGGATATGCTCCATaGTGTAGTTCGTGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERHGYAP*CSSCAC Trigger: ACAAGCACACGAACTACACCATGGAGCATATCCGTG...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACACGGATATGCTCCATaGTGTAGTTCGTGTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAHGYAP*CSSCAC Trigger: ACAAGCACACGAACTACACCATGGAGCATATCCGTG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAGATGTTTCTTCCACTaGGATGTCCTGAATGGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERRCFFH*DVLNGE Trigger: TTCGCCATTCAGGACATCTCAGTGGAAGAAACATCT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAATCCTTGTTAAGCTTTaGGTAGTCAATGAGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERILVKL*VVNEVG Trigger: CCCGACCTCATTGACTACTCAAAGCTTAACAAGGAT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAATCCTTGTTAAGCTTTaGGTAGTCAATGAGGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAILVKL*VVNEVG Trigger: CCCGACCTCATTGACTACTCAAAGCTTAACAAGGAT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCACTTGAACTGCTCATGTaGAGTGATCAGACTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERALELLM*SDQTLD Trigger: ATCCAGAGTCTGATCACTGCACATGAGCAGTTCAAG...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAATGTTGTGTTCGTACTaGTTCAGCTGGTTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAMLCSY*FSWFIW Trigger: CCAGATGAACCAGCTGAAGCAGTACGAACACAACAT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATGGTCGCAAATTTTCTaGCACCGATCATTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAWSQIF*HRSLTF Trigger: GAACGTCAATGATCGGTGCCAGAAAATTTGCGACCA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATGGTCGCAAATTTTCTaGCACCGATCATTGACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERWSQIF*HRSLTF Trigger: GAACGTCAATGATCGGTGCCAGAAAATTTGCGACCA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR TCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAAGCCTCTCATTCTCTTaGTTCACAGCAAGAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASLSFS*FTARTL Trigger: TAAGGTTCTTGCTGTGAATCAAGAGAATGAGAGGCT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAGCCTCTCATTCTCTTaGTTCACAGCAAGAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSLSFS*FTARTL Trigger: TAAGGTTCTTGCTGTGAATCAAGAGAATGAGAGGCT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGGGTCATCTTCACATTaGCATCGACTATTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERGSSSH*HRLFLQ Trigger: CTGAAGAAATAGTCGATGGCAATGTGAAGATGACCC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGGGTCATCTTCACATTaGCATCGACTATTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERAGSSSH*HRLFLQ Trigger: CTGAAGAAATAGTCGATGGCAATGTGAAGATGACCC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATCTTTCCAGCTGGTGTaGAAGTTCTGGATATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERASFQLV*KFWIFT Trigger: TGTGAATATCCAGAACTTCCACACCAGCTGGAAAGA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATCTTTCCAGCTGGTGTaGAAGTTCTGGATATTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERSFQLV*KFWIFT Trigger: TGTGAATATCCAGAACTTCCACACCAGCTGGAAAGA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTAGGGATATCCAAGTaGTTCTCTGCTATTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PILQPLLHSDRVGITERALGISK*FSAISM Trigger: CATGGAAATAGCAGAGAAGCACTTGGATATCCCTAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATTAGGGATATCCAAGTaGTTCTCTGCTATTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPILQPLLHSDRVGITERLGISK*FSAISM Trigger: CATGGAAATAGCAGAGAAGCACTTGGATATCCCTAA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS CCA 90 bp | TCCGGATGCTGTAGCTCTGGATCACCTTCTCCACCTCGTTCTGGATaGCCAGGATGGACTGCCGCTCCCCGTCGGCCTCGGGCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGCCSSGSPSPPRSG*PGWTAAPRRPRAVW Trigger: CCACACTGCCCGAGGCCGACGGGGAGCGGCAGTCCATCCTGGCCATCCAGAACGAGGTGGAGAAGGTGATCCAGAGCTACAGCATCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 ENSMUST00000221162.3 |
||
| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTTCCCCGGTCAGGTTaGGGCAGCCTTTCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERAFPRSG*GSLSPE Trigger: CTCAGGGGAAAGGCTGCCCAAACCTGACCGGGGAAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATTTCCCCGGTCAGGTTaGGGCAGCCTTTCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERFPRSG*GSLSPE Trigger: CTCAGGGGAAAGGCTGCCCAAACCTGACCGGGGAAA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAATGAAGGCGGGCCGGTaGCTGATCCGAAGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERMKAGR*LIRSLV Trigger: GACCAAGCTTCGGATCAGCAACCGGCCCGCCTTCAT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAACGCTCATTAGCATGTaGGCGAGCCAGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERTLISM*ASQLLL Trigger: CAGGAGGAGCTGGCTCGCCAACATGCTAATGAGCGT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAACCTTGTCCCACTTGTaGCGCAGCTCATCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERTLSHL*RSSSMV Trigger: CACCATGGATGAGCTGCGCAACAAGTGGGACAAGGT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAACCTTGTCCCACTTGTaGCGCAGCTCATCCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERATLSHL*RSSSMV Trigger: CACCATGGATGAGCTGCGCAACAAGTGGGACAAGGT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATTCACCTTGTCCCACTaGTTGCGCAGCTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERAFTLSH*LRSSSM Trigger: CATGGATGAGCTGCGCAACAAGTGGGACAAGGTGAA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAAGCAGCAGCCCTTCTTaGGCAGATGTTTCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERSSSPS*ADVSST Trigger: AGTGGAAGAAACATCTGCCAAAGAAGGGCTGCTGCT...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCATGGGTCTCCACCTCATaGATGGTTCTGGCGATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERAWVSTS*MVLAIV Trigger: AACTATCGCCAGAACCATCAATGAGGTGGAGACCCA...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATGGGTCTCCACCTCATaGATGGTTCTGGCGATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERWVSTS*MVLAIV Trigger: AACTATCGCCAGAACCATCAATGAGGTGGAGACCCA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCTCTTTCATCGGGTTaGGGAGTGTTGACAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERALSSG*GVLTMS Trigger: AGACATTGTCAACACTCCCAAACCCGATGAAAGAGC...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAGCTCTTTCATCGGGTTaGGGAGTGTTGACAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERAALSSG*GVLTMS Trigger: AGACATTGTCAACACTCCCAAACCCGATGAAAGAGC...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGATTGACATTCGCAATCTaGTGGAACCGCATTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QPILQPLLHSDRVGITERLTFAI*WNRIFP Trigger: GGGAAAAATGCGGTTCCACAAGATTGCGAATGTCAA...TCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS-3UTR CAA 90 bp | CCTATACTTCAGCCTTTATTGCATTCTGATAGGGTAGGGATTACAGAAAGAGCAAGGGTCATCTTCACATaGCCATCGACTATTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PILQPLLHSDRVGITERARVIFT*PSTISS Trigger: TGAAGAAATAGTCGATGGCAATGTGAAGATGACCCT...TGCTCTTTCTGTAATCCCTACCCTATCAGAATGCAATAAAGGCTGAAGTATAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS CCA 72 bp | TGTAGCTCTGGATCACCTTCTCCACCTCGTTCTGGATaGCCAGGATGGACTGCCGCTCCCCGTCGGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: CSSGSPSPPRSG*PGWTAAPRRPR Trigger: CCGAGGCCGACGGGGAGCGGCAGTCCATCCTGGCCATCCAGAACGAGGTGGAGAAGGTGATCCAGAGCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 ENSMUST00000221162.3 |
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| CDS TCA 72 bp | GGACACTGCCCGGGCCTGAGTATGGGGGCATTCTCTTaGTGCAGTACTGGGCCTGATCCGGAGGCAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GHCPGLSMGAFS*CSTGPDPEAAL Trigger: GAGAGCTGCCTCCGGATCAGGCCCAGTACTGCATCAAGAGAATGCCCCCATACTCAGGCCCGGGCAGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS GCA 72 bp | GGCCTGATCCGGAGGCAGCTCTCGACGAAGCTCCTCTaGCAAGATGTAAGGCTTATCAGAAGCCAGAATCCG | + |
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Preference number: 6 (lower is better) Translates to: GLIRRQLSTKLL*QDVRLIRSQNP Trigger: CGGATTCTGGCTTCTGATAAGCCTTACATCTTGGCAGAGGAGCTTCGTCGAGAGCTGCCTCCGGATCAGGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS GCA 72 bp | TTGATTCACAGCAAGAACCTTACATATTCTGTTAGCTaGTGTCTCGGCCTGCTCCGCTCCCGCGAAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: LIHSKNLTYSVS*CLGLLRSRESM Trigger: CATGCTTTCGCGGGAGCGGAGCAGGCCGAGACAGCAGCTAACAGAATATGTAAGGTTCTTGCTGTGAATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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| CDS TCA 72 bp | AGCCTCTCATATTCTTCCATCAGCCTCTCATTCTCTTaGTTCACAGCAAGAACCTTACATATTCTGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLSYSSISLSFS*FTARTLHILLA Trigger: AGCTAACAGAATATGTAAGGTTCTTGCTGTGAATCAAGAGAATGAGAGGCTGATGGAAGAATATGAGAGGCT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064204.14 ENSMUST00000168193.8 |
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