Pregenerated sensors for ACTL6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029712Ensembl transcript IDs: ENSMUST00000031725.10, ENSMUST00000136088.8, ENSMUST00000136565.8, ENSMUST00000139395.8, ENSMUST00000198601.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTCTGGAATGTGCCCAGTaGGGCCAAGATGGAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: KGEFSAFGFLAGRTPLWRLECAQ*GQDGAS Trigger: GGAGGCTCCATCTTGGCCTCACTGGGCACATTCCAG...ACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTCTCCGTGGATGGGGTaGACGGGTATTTGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KGEFSAFGFLAGRTPLWRSPWMG*TGIWGR Trigger: CCTCCCCCAAATACCCGTCCACCCCATCCACGGAGA...ACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCAAACAGGCCCTCAGGGATTCGAAGTCGCTCAGCGCCGTAGTCTGTGTTTCAATAGCCATTTCCTaGAAGAGCTCCCGGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: GIKQALRDSKSLSAVVCVSIAIS*KSSRHC Trigger: GCAGTGCCGGGAGCTCTTCCAGGAAATGGCTATTGA...AACACAGACTACGGCGCTGAGCGACTTCGAATCCCTGAGGGCCTGTTTGATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCTGGAAGTCTTGGATCACCTCGTTACACATGTAGTTATGCCAGGACTTGGAAGAGCTCCCGGCACTaGATGGAGATGAAGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RPGSLGSPRYTCSYARTWKSSRH*MEMKSP Trigger: AGGGGACTTCATCTCCATGCAGTGCCGGGAGCTCTT...CCAAGTCCTGGCATAACTACATGTGTAACGAGGTGATCCAAGACTTCCAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCCTCAGGGATTCGAAGTCGCTCAGCGCCGTAGTCTGTGTTGTAGCCATTTTTCATAATGCACAGTaGGCATTTGTGCAGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: QALRDSKSLSAVVCVVAIFHNAQ*AFVQLP Trigger: AGGTAGCTGCACAAATGCCCACTGTGCATTATGAAA...AATGGCTACAACACAGACTACGGCGCTGAGCGACTTCGAATCCCTGAGGGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR-3UTR CCA 90 bp | GGATTCGAAGTCGCTCAGCGCCGTAGTCTGTGTTGTAGCCATTGGGCATTTCATAGTTATGCCAGGACTTaGAGACTTGGGGTAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GFEVAQRRSLCCSHWAFHSYART*RLGVAS Trigger: AGAAGCTACCCCAAGTCTCCAAGTCCTGGCATAACT...ATGAAATGCCCAATGGCTACAACACAGACTACGGCGCTGAGCGACTTCGAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR-3UTR CAA 90 bp | TTGACATTAGAGGGATCAAACAGGCCCTCAGGGATTCGAAGTCGCTCAGCGCCGATGCACAGTGGGCATTaGTGCAGCTACCTGTTCATC | + |
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Preference number: 3 (lower is better) Translates to: LTLEGSNRPSGIRSRSAPMHSGH*CSYLFI Trigger: GATGAACAGGTAGCTGCACAAATGCCCACTGTGCAT...CGGCGCTGAGCGACTTCGAATCCCTGAGGGCCTGTTTGATCCCTCTAATGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR GCA 72 bp | GCCATTGGGCATTTCATAATGCACAGTGGGCATTTGTaGAGCTACCTGTTCATCGTAAGGGGAATCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: AIGHFIMHSGHL*SYLFIVRGIRH Trigger: GTGTCTGATTCCCCTTACGATGAACAGGTAGCTGCACAAATGCCCACTGTGCATTATGAAATGCCCAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR CCA 72 bp | GGATCACCTCGTTACACATGTAGTTATGCCAGGACTTaGAGACTTGGGGTAGCTTCTCCTTCTTCTTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: GSPRYTCSYART*RLGVASPSSSS Trigger: ACTGGAAGAAGAAGGAGAAGCTACCCCAAGTCTCCAAGTCCTGGCATAACTACATGTGTAACGAGGTGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGATCCAGGGGCTGAACTaGCGTTCCATGGTGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: FSSFNSGTSQSKKMWVREIQGLN*RSMVLL Trigger: CAACAGCACCATGGAACGCAAGTTCAGCCCCTGGAT...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR CCA 90 bp | GCCTCCAATCCAGGGGCTGAACTTGCGTTCCATGGTGCTGTTGCTGGCGATGAGGGGATGGCTGTAGTGTaGGTGGCCCCACTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ASNPGAELAFHGAVAGDEGMAVV*VAPLSS Trigger: GCTGGACAGTGGGGCCACCCACACTACAGCCATCCC...CTCATCGCCAGCAACAGCACCATGGAACGCAAGTTCAGCCCCTGGATTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR CCA 90 bp | TCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGTGGGGAAGTCAGCCTTaGGGCAGTCCTCCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SALLDFWLVERPSGVSPWWGSQP*GSPPQR Trigger: ACGCTGGGGAGGACTGCCCCAAGGCTGACTTCCCCA...CCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGGCAGCCCCACAGTGGTaGGGAAGTCAGCCTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SSALLDFWLVERPSGVSPAAPQW*GSQPWG Trigger: GCCCCAAGGCTGACTTCCCCACCACTGTGGGGCTGC...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCCCAGCAGCCCCACAGTaGTGGGGAAGTCAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFPAAPQ*WGSQPW Trigger: CCAAGGCTGACTTCCCCACCACTGTGGGGCTGCTGG...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGGGATGGCTGTAGTGTaGGTGGCCCCACTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVGMAVV*VAPLSS Trigger: GCTGGACAGTGGGGCCACCCACACTACAGCCATCCC...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | TCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGACGGAGCCTCCGACATaGGTACTGGGTGCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SALLDFWLVERPSGVSPWTEPPT*VLGAGL Trigger: CAAACCTGCACCCAGTACTCATGTCGGAGGCTCCGT...CCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGCCGATGCTGGTGGTaGCCACGTGACCCACTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SSALLDFWLVERPSGVSPCRCWW*PRDPLL Trigger: TAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCA...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | GCCTCCAATCCAGGGGCTGAACTTGCGTTCCATGGTGCTGTTGCTGGCGATGAGGGCGGTGGGGTCTTCTaGGAAAGCTCCCGATTAAGT | + |
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Preference number: 4 (lower is better) Translates to: ASNPGAELAFHGAVAGDEGGGVF*ESSRLS Trigger: ACTTAATCGGGAGCTTTCTCAGAAGACCCCACCGCC...CTCATCGCCAGCAACAGCACCATGGAACGCAAGTTCAGCCCCTGGATTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR TCA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGCTGGAATGTGCCCAGTaGGGCCAAGATGGAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVLECAQ*GQDGAS Trigger: GGAGGCTCCATCTTGGCCTCACTGGGCACATTCCAG...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCCCATCCCGAGGCACGTaGAGGGCATTGGTGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFPSRGT*RALVSM Trigger: CATCGACACCAATGCCCTGCACGTGCCTCGGGATGG...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | GAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCCCATCCCGAGGCACGTaGAGGGCATTGGTGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: EFSAFGFLAGRTPLWRFSPSRGT*RALVSM Trigger: CATCGACACCAATGCCCTGCACGTGCCTCGGGATGG...GGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | GCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGATGGGGGAATCAGACACCTaGAGTACGGAGGCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALLDFWLVERPSGVSPWMGESDT*STEAWK Trigger: CTTCCAGGCCTCCGTACTGCAGGTGTCTGATTCCCC...CATCCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGGGAAGTCAGCCTTaGGGCAGTCCTCCCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLWGSQP*GSPPQR Trigger: ACGCTGGGGAGGACTGCCCCAAGGCTGACTTCCCCA...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCAGCTTCTCCCGCTTaGCCCGAGTGTTCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFSASPA*PECSTE Trigger: CTCCGTGGAACACTCGGGCCAAGCGGGAGAAGCTGA...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGCCGATGCTGGTGGTaGCCACGTGACCCACTCCTA | + |
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Preference number: 4 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLCRCWW*PRDPLL Trigger: TAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCA...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | GGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCTCCAATCCAGGGGCTaGACTTGCGTTCCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GKGEFSAFGFLAGRTPLWLQSRG*TCVPWC Trigger: GCACCATGGAACGCAAGTTCAGCCCCTGGATTGGAG...CCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | TCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGAAGAGCTCCCGGCACTaGATGGAGATGAAGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SALLDFWLVERPSGVSPWKSSRH*MEMKSP Trigger: AGGGGACTTCATCTCCATGCAGTGCCGGGAGCTCTT...CCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | GAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGGGGAATCAGACACCTaGAGTACGGAGGCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EFSAFGFLAGRTPLWRFSGESDT*STEAWK Trigger: CTTCCAGGCCTCCGTACTGCAGGTGTCTGATTCCCC...GGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | TATGCCAGGACTTGGAGACTTGGGGTAGCTTCTCCTTCTTCTTCCAGTTTGGGGGGGATGGCTGTAGTGTaGGTGGCCCCACTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YARTWRLGVASPSSSSLGGMAVV*VAPLSS Trigger: GCTGGACAGTGGGGCCACCCACACTACAGCCATCCC...CCCCAAACTGGAAGAAGAAGGAGAAGCTACCCCAAGTCTCCAAGTCCTGGCATA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
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| CDS-3UTR CCA 90 bp | GCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGATGTGCAGTACGGAGGCCTaGAAGTCTTGGATCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: ALLDFWLVERPSGVSPWMCSTEA*KSWITS Trigger: CGAGGTGATCCAAGACTTCCAGGCCTCCGTACTGCA...CATCCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGAAGAGCTCCCGGCACTaGATGGAGATGAAGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVKSSRH*MEMKSP Trigger: AGGGGACTTCATCTCCATGCAGTGCCGGGAGCTCTT...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGCTCCGACATGAGTACTaGGTGCAGGTTTGGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: SSALLDFWLVERPSGVSPLRHEY*VQVWLG Trigger: TCCGAGCCAAACCTGCACCCAGTACTCATGTCGGAG...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCTGCAGTACGGAGGCCTaGAAGTCTTGGATCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: EFSAFGFLAGRTPLWRFSCSTEA*KSWITS Trigger: CGAGGTGATCCAAGACTTCCAGGCCTCCGTACTGCA...GGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCAGGAAAAGGGGGCGGTaGGGTCTTCTGAGAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFRKRGR*GLLRKL Trigger: GAGCTTTCTCAGAAGACCCCACCGCCCCCTTTTCCT...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR CCA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCCTCCGACATGAGTACTaGGTGCAGGTTTGGCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLLRHEY*VQVWLG Trigger: TCCGAGCCAAACCTGCACCCAGTACTCATGTCGGAG...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GGCCAAGATGGAGCCTCCAATCCAGGGGCTGAACTTGCGTTCCATGGTGCTGTTCAGGACTTGGAGACTTaGGGTAGCTTCTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GQDGASNPGAELAFHGAVQDLET*GSFSFF Trigger: GAAGAAGGAGAAGCTACCCCAAGTCTCCAAGTCCTG...AACAGCACCATGGAACGCAAGTTCAGCCCCTGGATTGGAGGCTCCATCTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR CCA 90 bp | GCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGATGCAGGACTTGGAGACTTaGGGTAGCTTCTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ALLDFWLVERPSGVSPWMQDLET*GSFSFF Trigger: GAAGAAGGAGAAGCTACCCCAAGTCTCCAAGTCCTG...CATCCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTTTAAGACGCATGCTCTaGGGAAGGAAAAGGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: WERESSALLDFWLVERPSLRRML*GRKRGR Trigger: CCGCCCCCTTTTCCTTCCCCAGAGCATGCGTCTTAA...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
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| CDS-3UTR TCA 90 bp | GGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGGTACCCAGCTCGGACTaGGAAAGAGCCAATGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GKGEFSAFGFLAGRTPLWVPSSD*ERANVK Trigger: TTTGACATTGGCTCTTTCTCAGTCCGAGCTGGGTAC...CCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTCTCGGTGGGGTCTTCTaGGAAAGCTCCCGATTAAGT | + |
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Preference number: 4 (lower is better) Translates to: WERESSALLDFWLVERPSLGGVF*ESSRLS Trigger: ACTTAATCGGGAGCTTTCTCAGAAGACCCCACCGAG...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS-3UTR GCA 90 bp | AGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGATTTGGAGATCCACATCTaGTGGAATGTGCCCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SAFGFLAGRTPLWRFSVDLEIHI*WNVPSE Trigger: CTCACTGGGCACATTCCAGCAGATGTGGATCTCCAA...ATCCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | ACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGGAGCAGCCCCACAGTGGTaGGGAAGTCAGCCTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: TSQSKKMWVREKRVMGKGAAPQW*GSQPWG Trigger: GCCCCAAGGCTGACTTCCCCACCACTGTGGGGCTGC...TCCCTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCGCACGTGCAGGGCATTaGTGTCGATGTGGAAAATCT | + |
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Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFARAGH*CRCGKS Trigger: AGATTTTCCACATCGACACCAATGCCCTGCACGTGC...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTTCAATAGCCATTTCCTaGAAGAGCTCCCGGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: WERESSALLDFWLVERPSSIAIS*KSSRHC Trigger: GCAGTGCCGGGAGCTCTTCCAGGAAATGGCTATTGA...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS-3UTR CCA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGAGGCCTGGAAGTCTTaGATCACCTCGTTACACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVEAWKS*ITSLHM Trigger: CATGTGTAACGAGGTGATCCAAGACTTCCAGGCCTC...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCGTACAGGCTCCTTGGCTGCAATCATGTAAGGAGGAATGATATCAATTCAGCTTCTCCCGCTTaGCCCGAGTGTTCCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPYRLLGCNHVRRNDINSASPA*PECSTP Trigger: CGGAGTGGAACACTCGGGCCAAGCGGGAGAAGCTGA...ATTGATATCATTCCTCCTTACATGATTGCAGCCAAGGAGCCTGTACGGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCGGTTTGGCTCGGACTTaGCATGTTTGCTGTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GEFSAFGFLAGRTPLWRFGLART*HVCCRY Trigger: ATACCTACAGCAAACATGTCAAGTCCGAGCCAAACC...GAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGCACAGTGGGCATTTGTaGAGCTACCTGTTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVHSGHL*SYLFIV Trigger: TACGATGAACAGGTAGCTGCACAAATGCCCACTGTG...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGCACGTGCAGGGCATTaGTGTCGATGTGGAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WERESSALLDFWLVERPSARAGH*CRCGKS Trigger: AGATTTTCCACATCGACACCAATGCCCTGCACGTGC...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTACTGGGTGCAGGTTTaGCTCGGACTTGACATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGEFSAFGFLAGRTPLWRYWVQV*LGLDMF Trigger: AAACATGTCAAGTCCGAGCCAAACCTGCACCCAGTA...ACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTACTGGGTGCAGGTTTaGCTCGGACTTGACATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSALLDFWLVERPSGVSPYWVQV*LGLDMF Trigger: AAACATGTCAAGTCCGAGCCAAACCTGCACCCAGTA...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCGGTTTGGCTCGGACTTaGCATGTTTGCTGTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLGLART*HVCCRY Trigger: ATACCTACAGCAAACATGTCAAGTCCGAGCCAAACC...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTAATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGGACATGAGTACTGGGTaGAGGTTTGGCTCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVMGKGEFSAFGFLAGRTDMSTG*RFGSDL Trigger: CAAGTCCGAGCCAAACCTGCACCCAGTACTCATGTC...CGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCATTACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| 3UTR CAA 72 bp | GGAATCAGACACCTGCAGTACGGAGGCCTGGAAGTCTaGGATCACCTCGTTACACATGTAGTTATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GIRHLQYGGLEV*DHLVTHVVMPG Trigger: TCCTGGCATAACTACATGTGTAACGAGGTGATCCAAGACTTCCAGGCCTCCGTACTGCAGGTGTCTGATTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTAATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGGCAGGAATGTTGTACTaGTCGAACATCAGCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVMGKGEFSAFGFLAGRTAGMLY*SNISSV Trigger: GACGGAGCTGATGTTCGAGCAGTACAACATTCCTGC...CGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCATTACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR GCA 90 bp | ACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGGATTCCGCTCCACGCACTaGTTCCCTCCCTCCTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSQSKKMWVREKRVMGKGFRSTH*FPPSSY Trigger: ATACGAGGAGGGAGGGAAGCAGTGCGTGGAGCGGAA...TCCCTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGGCATTGGTGTCGATGTaGAAAATCTTCCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSALLDFWLVERPSGVSPALVSM*KIFPFF Trigger: GAAGAAAGGGAAGATTTTCCACATCGACACCAATGC...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCTTTCATAATGCACAGTaGGCATTTGTGCAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EFSAFGFLAGRTPLWRFSFHNAQ*AFVQLP Trigger: AGGTAGCTGCACAAATGCCCACTGTGCATTATGAAA...GGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCGCATTGGTGTCGATGTaGAAAATCTTCCCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLALVSM*KIFPFF Trigger: GAAGAAAGGGAAGATTTTCCACATCGACACCAATGC...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR GCA 90 bp | GGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGACATGAGTACTGGGTaGAGGTTTGGCTCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSQSKKMWVREKRVMGKDMSTG*RFGSDL Trigger: CAAGTCCGAGCCAAACCTGCACCCAGTACTCATGTC...CTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGTCAGCTTCTCCCGCTTaGCCCGAGTGTTCCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSSFNSGTSQSKKMWVRESASPA*PECSTE Trigger: CTCCGTGGAACACTCGGGCCAAGCGGGAGAAGCTGA...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | ACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGGATCAATAGCCATTTCCTaGAAGAGCTCCCGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQSKKMWVREKRVMGKGSIAIS*KSSRHC Trigger: GCAGTGCCGGGAGCTCTTCCAGGAAATGGCTATTGA...TCCCTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTAATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGTTTCATAATGCACAGTaGGCATTTGTGCAGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RVMGKGEFSAFGFLAGRTFHNAQ*AFVQLP Trigger: AGGTAGCTGCACAAATGCCCACTGTGCATTATGAAA...CGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCATTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | GGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGAGTTATGCCAGGACTTaGAGACTTGGGGTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSQSKKMWVREKRVMGKSYART*RLGVAS Trigger: AGAAGCTACCCCAAGTCTCCAAGTCCTGGCATAACT...CTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGGTACCCAGCTCGGACTaGGAAAGAGCCAATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSSFNSGTSQSKKMWVREVPSSD*ERANVK Trigger: TTTGACATTGGCTCTTTCTCAGTCCGAGCTGGGTAC...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGGAGGCCTGGAAGTCTTaGATCACCTCGTTACACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSSFNSGTSQSKKMWVREEAWKS*ITSLHM Trigger: CATGTGTAACGAGGTGATCCAAGACTTCCAGGCCTC...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGCACAGTGGGCATTTGTaGAGCTACCTGTTCATCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSSFNSGTSQSKKMWVREHSGHL*SYLFIV Trigger: TACGATGAACAGGTAGCTGCACAAATGCCCACTGTG...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAGTTATGCCAGGACTTaGAGACTTGGGGTAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSFNSGTSQSKKMWVRESYART*RLGVAS Trigger: AGAAGCTACCCCAAGTCTCCAAGTCCTGGCATAACT...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS TCA 90 bp | AGAGACCCGGGCGAATGTCAATGTCACACATGCCGATGCTGGTGGTaGCCACGTGACCCACTCCTAGCATGGTATTCCCGGACAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RDPGECQCHTCRCWW*PRDPLLAWYSRTGP Trigger: AGGGCCTGTCCGGGAATACCATGCTAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCATGTGTGACATTGACATTCGCCCGGGTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS CCA 90 bp | CTCCCGCTTGGCCCGAGTGTTCCACGGAGCCTCCGACATGAGTACTaGGTGCAGGTTTGGCTCGGACTTGACATGTTTGCTGTAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: LPLGPSVPRSLRHEY*VQVWLGLDMFAVGM Trigger: CATACCTACAGCAAACATGTCAAGTCCGAGCCAAACCTGCACCCAGTACTCATGTCGGAGGCTCCGTGGAACACTCGGGCCAAGCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031725.10 ENSMUST00000136088.8 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | TATGCCAGGACTTGGAGACTTGGGGTAGCTTCTCCTTCTTCTTCCAGTTTGGGGGTCAGCTTCTCCCGCTaGGCCCGAGTGTTCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: YARTWRLGVASPSSSSLGVSFSR*ARVFHS Trigger: GGAGTGGAACACTCGGGCCAAGCGGGAGAAGCTGAC...CCCCAAACTGGAAGAAGAAGGAGAAGCTACCCCAAGTCTCCAAGTCCTGGCATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
||
| CDS TCA 90 bp | GGGCGAATGTCAATGTCACACATGCCGATGCTGGTGGTGACCACGTaGCCCACTCCTAGCATGGTATTCCCGGACAGGCCCTTGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: GRMSMSHMPMLVVTT*PTPSMVFPDRPLTL Trigger: TAATGTCAAGGGCCTGTCCGGGAATACCATGCTAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCATGTGTGACATTGACATTCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS GCA 90 bp | CCATTCTTGAGGGGCGACATGACCTCCGCTCCATCCCGAGGCACGTaGAGGGCATTGGTGTCGATGTGGAAAATCTTCCCTTTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFLRGDMTSAPSRGT*RALVSMWKIFPFFS Trigger: AGAGAAGAAAGGGAAGATTTTCCACATCGACACCAATGCCCTGCACGTGCCTCGGGATGGAGCGGAGGTCATGTCGCCCCTCAAGAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | GGCCAAGATGGAGCCTCCAATCCAGGGGCTGAACTTGCGTTCCATGGTGCTGTTTCAATCATGCCATTCTaGAGGGGCGACATGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GQDGASNPGAELAFHGAVSIMPF*RGDMTS Trigger: GGAGGTCATGTCGCCCCTCAAGAATGGCATGATTGA...AACAGCACCATGGAACGCAAGTTCAGCCCCTGGATTGGAGGCTCCATCTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031725.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGGGGAATCAGACACCTGCAGTACGGAGGCCTGGAAGTCTTGGATCACCTCGTGAGCACGGCCGTCTaGCATAAGAAGAAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRGIRHLQYGGLEVLDHLVSTAV*HKKKAG Trigger: TCCTGCCTTCTTCTTATGCAAGACGGCCGTGCTCAC...GAGGTGATCCAAGACTTCCAGGCCTCCGTACTGCAGGTGTCTGATTCCCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGATCCAGGGGCTGAACTaGCGTTCCATGGTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSALLDFWLVERPSGVSPIQGLN*RSMVLL Trigger: CAACAGCACCATGGAACGCAAGTTCAGCCCCTGGAT...CGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCACGTGCAGGGCATaGGTGTCGATGTGGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: WERESSALLDFWLVERPSGTCRA*VSMWKI Trigger: GATTTTCCACATCGACACCAATGCCCTGCACGTGCC...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCGGCACGTGCAGGGCATaGGTGTCGATGTGGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: MGKGEFSAFGFLAGRTPLGTCRA*VSMWKI Trigger: GATTTTCCACATCGACACCAATGCCCTGCACGTGCC...GAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGGAGGCCTGGAAGTCTaGGATCACCTCGTTACACAT | + |
|
Preference number: 5 (lower is better) Translates to: FSAFGFLAGRTPLWRFSVGGLEV*DHLVTH Trigger: ATGTGTAACGAGGTGATCCAAGACTTCCAGGCCTCC...CACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | AGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTTTCTCCGTGGATGGAGGCCTGGAAGTCTaGGATCACCTCGTTACACAT | + |
|
Preference number: 5 (lower is better) Translates to: SAFGFLAGRTPLWRFSVDGGLEV*DHLVTH Trigger: ATGTGTAACGAGGTGATCCAAGACTTCCAGGCCTCC...ATCCACGGAGAAACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTGGCGTCGTTCCATGGTGCTGTaGCTGGCGATGAGCTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGEFSAFGFLAGRTPLWRRSMVL*LAMSLR Trigger: TCTTAAGCTCATCGCCAGCAACAGCACCATGGAACG...ACGCCAGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
||
| CDS CCA 90 bp | TTCCATGGTGCTGTTGCTGGCGATGAGCTTAAGACGCATGCTCGGTaGGGTCTTCTGAGAAAGCTCCCGATTAAGTCTGTCTGTGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: FHGAVAGDELKTHAR*GLLRKLPIKSVCEP Trigger: GGGTTCACAGACAGACTTAATCGGGAGCTTTCTCAGAAGACCCCACCGAGCATGCGTCTTAAGCTCATCGCCAGCAACAGCACCATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | GGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGTCAGCTTCTCCCGCTaGGCCCGAGTGTTCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTSQSKKMWVREKRVMGKVSFSR*ARVFHG Trigger: TCCGTGGAACACTCGGGCCAAGCGGGAGAAGCTGAC...CTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAAAGGGAGAGTTCAGCGCTTTTGGATTTCTGGCTGGTAGAACGCCCCTCTATGCACAGTGGGCATTaGTGCAGCTACCTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WERESSALLDFWLVERPSMHSGH*CSYLFI Trigger: GATGAACAGGTAGCTGCACAAATGCCCACTGTGCAT...AGAGGGGCGTTCTACCAGCCAGAAATCCAAAAGCGCTGAACTCTCCCTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | GGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGGTGAGCACGGCCGTCTaGCATAAGAAGAAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTSQSKKMWVREKRVMGKVSTAV*HKKKAG Trigger: TCCTGCCTTCTTCTTATGCAAGACGGCCGTGCTCAC...CTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | GGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGAAGAGGGTAATGGGAAAGTCAATCATGCCATTCTaGAGGGGCGACATGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTSQSKKMWVREKRVMGKSIMPF*RGDMTS Trigger: GGAGGTCATGTCGCCCCTCAAGAATGGCATGATTGA...CTTTCCCATTACCCTCTTCTCTCTTACCCACATCTTCTTAGACTGTGATGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTCTTTCAACTCAGGAACATCACAGTCTAAGAAGATGTGGGTAAGAGAGGTGAGCACGGCCGTCTaGCATAAGAAGAAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSSFNSGTSQSKKMWVREVSTAV*HKKKAG Trigger: TCCTGCCTTCTTCTTATGCAAGACGGCCGTGCTCAC...CTCTCTTACCCACATCTTCTTAGACTGTGATGTTCCTGAGTTGAAAGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
||
| CDS CAA 72 bp | TACTGCTCGAACATCAGCTCCGTCAGCTTCTCCCGCTaGGCCCGAGTGTTCCACTCCGCCGTAGACGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: YCSNISSVSFSR*ARVFHSAVDAP Trigger: GGGGGCGTCTACGGCGGAGTGGAACACTCGGGCCAAGCGGGAGAAGCTGACGGAGCTGATGTTCGAGCAGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198601.2 |
||
| CDS CAA 72 bp | GCTCGGAAGCACTCCCAGTCCTCAATCATGCCATTCTaGAGGGGCGACATGACCTCCGCTCCATCCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARKHSQSSIMPF*RGDMTSAPSRG Trigger: GCCTCGGGATGGAGCGGAGGTCATGTCGCCCCTCAAGAATGGCATGATTGAGGACTGGGAGTGCTTCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS GCA 72 bp | AGGGGCGACATGACCTCCGCTCCATCCCGAGGCACGTaGAGGGCATTGGTGTCGATGTGGAAAATCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RGDMTSAPSRGT*RALVSMWKIFP Trigger: AGGGAAGATTTTCCACATCGACACCAATGCCCTGCACGTGCCTCGGGATGGAGCGGAGGTCATGTCGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS CAA 72 bp | TACTGCTCGAACATCAGCTCCGTCAGCTTCTCCCGCTaGGCCCGAGTGTTCCACGGAGCCTCCGACATGAGT | + |
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Preference number: 6 (lower is better) Translates to: YCSNISSVSFSR*ARVFHGASDMS Trigger: ACTCATGTCGGAGGCTCCGTGGAACACTCGGGCCAAGCGGGAGAAGCTGACGGAGCTGATGTTCGAGCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031725.10 ENSMUST00000136088.8 ENSMUST00000139395.8 |
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| CDS CAA 90 bp | GGAATGTTGTACTGCTCGAACATCAGCTCCGTCAGCTTCTCCCGCTaGGCCCGAGTGTTCCACGGAGCCTCCGACATGAGTACTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GMLYCSNISSVSFSR*ARVFHGASDMSTGC Trigger: GCACCCAGTACTCATGTCGGAGGCTCCGTGGAACACTCGGGCCAAGCGGGAGAAGCTGACGGAGCTGATGTTCGAGCAGTACAACATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031725.10 ENSMUST00000136088.8 ENSMUST00000139395.8 |
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| CDS TCA 72 bp | TCAATGTCACACATGCCGATGCTGGTGGTGACCACGTaGCCCACTCCTAGCATGGTATTCCCGGACAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SMSHMPMLVVTT*PTPSMVFPDRP Trigger: GGGCCTGTCCGGGAATACCATGCTAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCATGTGTGACATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS CCA 72 bp | GGCCCGAGTGTTCCACGGAGCCTCCGACATGAGTACTaGGTGCAGGTTTGGCTCGGACTTGACATGTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GPSVPRSLRHEY*VQVWLGLDMFA Trigger: AGCAAACATGTCAAGTCCGAGCCAAACCTGCACCCAGTACTCATGTCGGAGGCTCCGTGGAACACTCGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031725.10 ENSMUST00000136088.8 ENSMUST00000139395.8 |
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| CDS CAA 72 bp | CCAATCCAGGGGCTGAACTTGCGTTCCATGGTGCTGTaGCTGGCGATGAGCTTAAGACGCATGCTCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PIQGLNLRSMVL*LAMSLRRMLGG Trigger: CCCACCGAGCATGCGTCTTAAGCTCATCGCCAGCAACAGCACCATGGAACGCAAGTTCAGCCCCTGGATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS TCA 72 bp | GCACCAGGCCTGTGGAGCGTCCATTTGCAAAGGCTGTaGGCACGGCCGTCTTGCATAAGAAGAAGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: APGLWSVHLQRL*ARPSCIRRRQE Trigger: TTCCTGCCTTCTTCTTATGCAAGACGGCCGTGCTCACAGCCTTTGCAAATGGACGCTCCACAGGCCTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031725.10 ENSMUST00000136565.8 ENSMUST00000139395.8 ENSMUST00000198601.2 |
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| CDS TCA 72 bp | GGCGAATGTCAATGTCACACATGCCGATGCTGGTGGTaGCCACGTGACCCACTCCTAGCATGGTATTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GECQCHTCRCWW*PRDPLLAWYSR Trigger: CCGGGAATACCATGCTAGGAGTGGGTCACGTGGTCACCACCAGCATCGGCATGTGTGACATTGACATTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031725.10 ENSMUST00000139395.8 |
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| CDS TCA 72 bp | GCGATGAGCTTAAGACGCATGCTCGGTGGGGTCTTCTaGGAAAGCTCCCGATTAAGTCTGTCTGTGAACCCC | + |
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Preference number: 6 (lower is better) Translates to: AMSLRRMLGGVF*ESSRLSLSVNP Trigger: GGGGTTCACAGACAGACTTAATCGGGAGCTTTCTCAGAAGACCCCACCGAGCATGCGTCTTAAGCTCATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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| CDS CCA 72 bp | GCTGTTGCTGGCGATGAGCTTAAGACGCATGCTCGGTaGGGTCTTCTGAGAAAGCTCCCGATTAAGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AVAGDELKTHAR*GLLRKLPIKSV Trigger: GACAGACTTAATCGGGAGCTTTCTCAGAAGACCCCACCGAGCATGCGTCTTAAGCTCATCGCCAGCAACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139395.8 |
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